Commit 3360880f authored by Philippe Grosjean's avatar Philippe Grosjean
Browse files

Update Dockerfile

parent db2f1b6b
Pipeline #245603 passed with stage
in 27 minutes and 50 seconds
......@@ -67,9 +67,9 @@ RUN apt-get update --fix-missing && \
wget \
vim \
# for mongolite
#libsasl2-dev \
libsasl2-dev \
# for keyring
#libsecret-1-dev \
libsecret-1-dev \
# added for SciViews Box/BioDataScience
hunspell-en-us \
hunspell-en-gb \
......@@ -132,10 +132,11 @@ RUN echo ". ${CONDA_PATH}/etc/profile.d/conda.sh" >> ~/.bashrc && \
echo "source ~/.bashrc" >> ~/.bash_profile
# install R and python dependencies
ENV GITHUB_PAT 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
COPY install.R /tmp/
COPY requirements.txt /tmp/
RUN R -f /tmp/install.R && \
#R --quiet -e "install.packages('webshot'); webshot::install_phantomjs()" && \
R --quiet -e "install.packages('webshot'); webshot::install_phantomjs()" && \
pip3 install -r /tmp/requirements.txt
COPY post-init.sh /post-init.sh
......
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