From c42331255f0a67d840bef870f65a45c160cccad9 Mon Sep 17 00:00:00 2001 From: Remko Nijzink Date: Thu, 24 Sep 2020 15:20:23 +0200 Subject: [PATCH] renku run python3 src_py/prep_hydromod_aus.py -iq data/aus_discharge/South_Aligator_El_Sharana/DataSet -im data/SILO_aus_discharge/South_Aligator_El_Sharana/DataDrillDataset.php -ic data/aus_discharge/South_Aligator_El_Sharana_catch_chars.txt --mfactor 2.0 -o data/HYDRO_input/aus_prec2_0/South_Aligator_El_Sharana/ --- .gitattributes | 1 + ...d24efea5a54899b2a72b373fa36634_python3.cwl | 120 ++++++++++++++++++ .../South_Aligator_El_Sharana/Date.txt | 3 + .../South_Aligator_El_Sharana/Etp.txt | 3 + .../South_Aligator_El_Sharana/Prec.txt | 3 + .../South_Aligator_El_Sharana/Qobs.txt | 3 + .../South_Aligator_El_Sharana/Temp.txt | 3 + 7 files changed, 136 insertions(+) create mode 100644 .renku/workflow/e4d24efea5a54899b2a72b373fa36634_python3.cwl create mode 100644 data/HYDRO_input/aus_prec2_0/South_Aligator_El_Sharana/Date.txt create mode 100644 data/HYDRO_input/aus_prec2_0/South_Aligator_El_Sharana/Etp.txt create mode 100644 data/HYDRO_input/aus_prec2_0/South_Aligator_El_Sharana/Prec.txt create mode 100644 data/HYDRO_input/aus_prec2_0/South_Aligator_El_Sharana/Qobs.txt create mode 100644 data/HYDRO_input/aus_prec2_0/South_Aligator_El_Sharana/Temp.txt diff --git a/.gitattributes b/.gitattributes index c4fb59f6e6..9c7e4df021 100644 --- a/.gitattributes +++ b/.gitattributes @@ -5165,3 +5165,4 @@ data/HYDRO_input/aus_prec0_8/South_Aligator_El_Sharana/** filter=lfs diff=lfs me data/HYDRO_input/aus_prec1_4/South_Aligator_El_Sharana/** filter=lfs diff=lfs merge=lfs -text data/HYDRO_input/aus_prec1_6/South_Aligator_El_Sharana/** filter=lfs diff=lfs merge=lfs -text data/HYDRO_input/aus_prec1_8/South_Aligator_El_Sharana/** filter=lfs diff=lfs merge=lfs -text +data/HYDRO_input/aus_prec2_0/South_Aligator_El_Sharana/** filter=lfs diff=lfs merge=lfs -text diff --git a/.renku/workflow/e4d24efea5a54899b2a72b373fa36634_python3.cwl b/.renku/workflow/e4d24efea5a54899b2a72b373fa36634_python3.cwl new file mode 100644 index 0000000000..43dfb9450a --- /dev/null +++ b/.renku/workflow/e4d24efea5a54899b2a72b373fa36634_python3.cwl @@ -0,0 +1,120 @@ +arguments: [] +baseCommand: +- python3 +class: CommandLineTool +cwlVersion: v1.0 +hints: [] +inputs: + input_1: + default: + class: File + path: ../../src_py/prep_hydromod_aus.py + inputBinding: + position: 1 + separate: true + shellQuote: true + streamable: false + type: File + input_2: + default: q + inputBinding: + position: 2 + prefix: -i + separate: false + shellQuote: true + streamable: false + type: string + input_3: + default: + class: File + path: ../../data/aus_discharge/South_Aligator_El_Sharana/DataSet + inputBinding: + position: 3 + separate: true + shellQuote: true + streamable: false + type: File + input_4: + default: m + inputBinding: + position: 4 + prefix: -i + separate: false + shellQuote: true + streamable: false + type: string + input_5: + default: + class: File + path: ../../data/SILO_aus_discharge/South_Aligator_El_Sharana/DataDrillDataset.php + inputBinding: + position: 5 + separate: true + shellQuote: true + streamable: false + type: File + input_6: + default: c + inputBinding: + position: 6 + prefix: -i + separate: false + shellQuote: true + streamable: false + type: string + input_7: + default: + class: File + path: ../../data/aus_discharge/South_Aligator_El_Sharana_catch_chars.txt + inputBinding: + position: 7 + separate: true + shellQuote: true + streamable: false + type: File + input_8: + default: '2.0' + inputBinding: + position: 8 + prefix: --mfactor + separate: true + shellQuote: true + streamable: false + type: string + input_9: + default: data/HYDRO_input/aus_prec2_0/South_Aligator_El_Sharana + inputBinding: + position: 9 + prefix: -o + separate: true + shellQuote: true + streamable: false + type: string +outputs: + output_0: + outputBinding: + glob: $(inputs.input_9) + streamable: false + type: Directory +permanentFailCodes: [] +requirements: +- class: InlineJavascriptRequirement +- class: InitialWorkDirRequirement + listing: + - entry: '$({"listing": [], "class": "Directory"})' + entryname: data/HYDRO_input/aus_prec2_0/South_Aligator_El_Sharana + writable: true + - entry: $(inputs.input_1) + entryname: src_py/prep_hydromod_aus.py + writable: false + - entry: $(inputs.input_3) + entryname: data/aus_discharge/South_Aligator_El_Sharana/DataSet + writable: false + - entry: $(inputs.input_5) + entryname: data/SILO_aus_discharge/South_Aligator_El_Sharana/DataDrillDataset.php + writable: false + - entry: $(inputs.input_7) + entryname: data/aus_discharge/South_Aligator_El_Sharana_catch_chars.txt + writable: false +successCodes: [] +temporaryFailCodes: [] diff --git a/data/HYDRO_input/aus_prec2_0/South_Aligator_El_Sharana/Date.txt b/data/HYDRO_input/aus_prec2_0/South_Aligator_El_Sharana/Date.txt new file mode 100644 index 0000000000..772dd7c202 --- /dev/null +++ b/data/HYDRO_input/aus_prec2_0/South_Aligator_El_Sharana/Date.txt @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:19a0de7d1e3ae904ac9bf8c28a73a493af79144659f8dbe6f65a645e806c0da4 +size 122166 diff --git a/data/HYDRO_input/aus_prec2_0/South_Aligator_El_Sharana/Etp.txt b/data/HYDRO_input/aus_prec2_0/South_Aligator_El_Sharana/Etp.txt new file mode 100644 index 0000000000..5e96d7822d --- /dev/null +++ b/data/HYDRO_input/aus_prec2_0/South_Aligator_El_Sharana/Etp.txt @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:43749968c1a18d5ba63fdd1e2188752fce13b4af571b891225765e1a4b91220b +size 277650 diff --git a/data/HYDRO_input/aus_prec2_0/South_Aligator_El_Sharana/Prec.txt b/data/HYDRO_input/aus_prec2_0/South_Aligator_El_Sharana/Prec.txt new file mode 100644 index 0000000000..3a6903d1cc --- /dev/null +++ b/data/HYDRO_input/aus_prec2_0/South_Aligator_El_Sharana/Prec.txt @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:db58213d385072727470a9aad9f4ee6e915a7900db1936a662cfbf85ec41fdec +size 277650 diff --git a/data/HYDRO_input/aus_prec2_0/South_Aligator_El_Sharana/Qobs.txt b/data/HYDRO_input/aus_prec2_0/South_Aligator_El_Sharana/Qobs.txt new file mode 100644 index 0000000000..728e2c2176 --- /dev/null +++ b/data/HYDRO_input/aus_prec2_0/South_Aligator_El_Sharana/Qobs.txt @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:d0562c7831beea5e628d5bc4fe0dc8ae228a449f95fcb5f4a1e97b475959fb0b +size 255810 diff --git a/data/HYDRO_input/aus_prec2_0/South_Aligator_El_Sharana/Temp.txt b/data/HYDRO_input/aus_prec2_0/South_Aligator_El_Sharana/Temp.txt new file mode 100644 index 0000000000..52903b5623 --- /dev/null +++ b/data/HYDRO_input/aus_prec2_0/South_Aligator_El_Sharana/Temp.txt @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:0318a95de2f4eb2d9d16fd7236cba1a3985f8da731fba1c122cd40858355b35d +size 277650 -- GitLab