renku migrate

renku-transaction: 70925dd2f5fe4e6b8f4378f9e7fca842

renku migrate
renku-transaction: 70925dd2f5fe4e6b8f4378f9e7fca842
9f005b2d · Almut Luetge · renku 1.0.2 · dd2a0c78 · dd2a0c78 · dd2a0c78
Commit 9f005b2d authored Jan 20, 2022 by Almut Luetge Committed by renku 1.0.2 Jan 20, 2022
--- a/.renku/datasets/3e338d41-056c-4580-baa8-3d330b69159d/metadata.yml
+++ b/.renku/datasets/3e338d41-056c-4580-baa8-3d330b69159d/metadata.yml
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--- a/.renku/datasets/de2535b3-d0c6-46fe-9464-76f219966bd8/metadata.yml
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-  - '@id': https://localhost/urls/%2F%2Frenkulab.io%2Fdatasets%2Fd9c436ff-6a7a-4a2a-8d15-60740e14db1d
-  http://schema.org/subjectOf: []
-  http://schema.org/url:
-  - '@value': https://renkulab.io/datasets/27a71ca6-86fc-44a0-8dae-a0aaa73ed7a3
-  http://www.w3.org/2000/01/rdf-schema#label:
-  - '@value': 27a71ca6-86fc-44a0-8dae-a0aaa73ed7a3
-  http://www.w3.org/ns/prov#atLocation:
-  - '@value': .renku/datasets/de2535b3-d0c6-46fe-9464-76f219966bd8
- '@id': https://renkulab.io/projects/omnibenchmark/omni_batch/mnn-omni-batch
-  '@type':
-  - http://schema.org/Project
-  - http://www.w3.org/ns/prov#Location
-  http://schema.org/agent:
-  - '@value': 0.16.1.post1
-  http://schema.org/creator:
-  - '@id': mailto:almut.lue@gmail.com
-  http://schema.org/dateCreated:
-  - '@value': '2021-03-19T09:45:05.765141+00:00'
-  http://schema.org/name:
-  - '@value': mnn_omni_batch
-  http://schema.org/schemaVersion:
-  - '@value': '8'
-  https://swissdatasciencecenter.github.io/renku-ontology#automatedTemplateUpdate:
-  - '@value': false
-  https://swissdatasciencecenter.github.io/renku-ontology#immutableTemplateFiles: []
-  https://swissdatasciencecenter.github.io/renku-ontology#templateId:
-  - '@value': R-minimal
-  https://swissdatasciencecenter.github.io/renku-ontology#templateMetadata:
-  - '@value': '{"__template_source__": "https://github.com/SwissDataScienceCenter/renku-project-template",
-      "__template_ref__": "0.1.17", "__template_id__": "R-minimal", "__namespace__":
-      "omnibenchmark/omni_batch", "__automated_update__": true, "__repository__":
-      "https://renkulab.io/gitlab", "__sanitized_project_name__": "mnn-omni-batch",
-      "__project_slug__": "omnibenchmark/omni_batch/mnn-omni-batch", "description":
-      "Implementation of MNN to compare single cell integration methods", "name":
-      "mnn_omni_batch"}'
-  https://swissdatasciencecenter.github.io/renku-ontology#templateReference:
-  - '@value': 0.1.17
-  https://swissdatasciencecenter.github.io/renku-ontology#templateSource:
-  - '@value': https://github.com/SwissDataScienceCenter/renku-project-template
-  https://swissdatasciencecenter.github.io/renku-ontology#templateVersion:
-  - '@value': 73db625bf5d9effa1d76a4e5e1fcbcb1a927f654
- '@id': mailto:almut.lue@gmail.com
-  '@type':
-  - http://schema.org/Person
-  - http://www.w3.org/ns/prov#Person
-  http://schema.org/email:
-  - '@value': almut.lue@gmail.com
-  http://schema.org/name:
-  - '@value': Almut Luetge
-  http://www.w3.org/2000/01/rdf-schema#label:
-  - '@value': Almut Luetge
- '@id': mailto:anthony.sonrel@uzh.ch
-  '@type':
-  - http://schema.org/Person
-  - http://www.w3.org/ns/prov#Person
-  http://schema.org/email:
-  - '@value': anthony.sonrel@uzh.ch
-  http://schema.org/name:
-  - '@value': Anthony Sonrel
-  http://www.w3.org/2000/01/rdf-schema#label:
-  - '@value': Anthony Sonrel
--- a/.renku/datasets/f6db6b97-4c9b-4f47-bb1e-c6a86567c1c4/metadata.yml
+++ b/.renku/datasets/f6db6b97-4c9b-4f47-bb1e-c6a86567c1c4/metadata.yml
--- a/.renku/metadata.yml
+++ b/.renku/metadata.yml
-'@id': https://renkulab.io/projects/omnibenchmark/omni_batch/mnn-omni-batch
-'@type':
- http://schema.org/Project
- http://www.w3.org/ns/prov#Location
-http://schema.org/agent: 0.16.1.post1
-http://schema.org/creator:
-  '@id': mailto:almut.lue@gmail.com
-  '@type':
-  - http://schema.org/Person
-  - http://www.w3.org/ns/prov#Person
-  http://schema.org/affiliation: null
-  http://schema.org/alternateName: null
-  http://schema.org/email: almut.lue@gmail.com
-  http://schema.org/name: Almut Luetge
-  http://www.w3.org/2000/01/rdf-schema#label: Almut Luetge
-http://schema.org/dateCreated: '2021-03-19T09:45:05.765141+00:00'
-http://schema.org/name: mnn_omni_batch
-http://schema.org/schemaVersion: '8'
-https://swissdatasciencecenter.github.io/renku-ontology#automatedTemplateUpdate: false
-https://swissdatasciencecenter.github.io/renku-ontology#immutableTemplateFiles: []
-https://swissdatasciencecenter.github.io/renku-ontology#templateId: R-minimal
-https://swissdatasciencecenter.github.io/renku-ontology#templateMetadata: '{"__template_source__":
-  "https://github.com/SwissDataScienceCenter/renku-project-template", "__template_ref__":
-  "0.1.17", "__template_id__": "R-minimal", "__namespace__": "omnibenchmark/omni_batch",
-  "__automated_update__": true, "__repository__": "https://renkulab.io/gitlab", "__sanitized_project_name__":
-  "mnn-omni-batch", "__project_slug__": "omnibenchmark/omni_batch/mnn-omni-batch",
-  "description": "Implementation of MNN to compare single cell integration methods",
-  "name": "mnn_omni_batch"}'
-https://swissdatasciencecenter.github.io/renku-ontology#templateReference: 0.1.17
-https://swissdatasciencecenter.github.io/renku-ontology#templateSource: https://github.com/SwissDataScienceCenter/renku-project-template
-https://swissdatasciencecenter.github.io/renku-ontology#templateVersion: 73db625bf5d9effa1d76a4e5e1fcbcb1a927f654
+# Dummy file kept for backwards compatibility, does not contain actual version
+'http://schema.org/schemaVersion': '9'
\ No newline at end of file
--- a/.renku/metadata/01/33/0133d20a19425cdfec325c105700bbaef25a0fded7e5bf99420deaa2f49891b7
+++ b/.renku/metadata/01/33/0133d20a19425cdfec325c105700bbaef25a0fded7e5bf99420deaa2f49891b7
--- a/.renku/metadata/08/4a/084a231600a04f78a77b9fa159d342443f1e6009e62841c8b00c73927ed16f66
+++ b/.renku/metadata/08/4a/084a231600a04f78a77b9fa159d342443f1e6009e62841c8b00c73927ed16f66
--- a/.renku/metadata/0b/41/0b4193b85d0e470da8e097470e801f784e0ff1f47d264d71864a827409d62572
+++ b/.renku/metadata/0b/41/0b4193b85d0e470da8e097470e801f784e0ff1f47d264d71864a827409d62572
--- a/.renku/metadata/15/25/15254b33ddc5df4554658da77d1f3df4a8ec5c0b80f5f97824a30d6e3cb25526
+++ b/.renku/metadata/15/25/15254b33ddc5df4554658da77d1f3df4a8ec5c0b80f5f97824a30d6e3cb25526
--- a/.renku/metadata/1b/69/1b695a00d2914f5091738a3671805b00e9a03f0017be4860bfc5795eb9906de1
+++ b/.renku/metadata/1b/69/1b695a00d2914f5091738a3671805b00e9a03f0017be4860bfc5795eb9906de1
--- a/.renku/metadata/1b/6e/1b6ec118dbf181d6a8f0f820f31beb0569cccb2f20d893956241a6342864575e
+++ b/.renku/metadata/1b/6e/1b6ec118dbf181d6a8f0f820f31beb0569cccb2f20d893956241a6342864575e
--- a/.renku/metadata/1c/52/1c52bbdcffbd437f9ace563c2afa635d9b116d8f188449179a685b45d0f277ec
+++ b/.renku/metadata/1c/52/1c52bbdcffbd437f9ace563c2afa635d9b116d8f188449179a685b45d0f277ec
--- a/.renku/metadata/1c/e1/1ce147657007e736149eff150e17bf021616afedd6ceeb4a7f928692e1f5ea23
+++ b/.renku/metadata/1c/e1/1ce147657007e736149eff150e17bf021616afedd6ceeb4a7f928692e1f5ea23
--- a/.renku/metadata/20/48/2048caf6440b4586b9ebacf5ebd5ab75df7f2391ad164e0197aad59311742842
+++ b/.renku/metadata/20/48/2048caf6440b4586b9ebacf5ebd5ab75df7f2391ad164e0197aad59311742842
+{
+  "@renku_data_type": "BTrees.OOBTree.OOBucket",
+  "@renku_data_value": {
+    "@renku_data_type": "builtins.tuple",
+    "@renku_data_value": [
+      {
+        "@renku_data_type": "builtins.tuple",
+        "@renku_data_value": [
+          "BTree",
+          {
+            "@renku_data_type": "type",
+            "@renku_data_value": "BTrees.OOBTree.OOBTree"
+          },
+          "Bucket",
+          {
+            "@renku_data_type": "type",
+            "@renku_data_value": "BTrees.OOBTree.OOBucket"
+          },
+          "Set",
+          {
+            "@renku_data_type": "type",
+            "@renku_data_value": "BTrees.OOBTree.OOSet"
+          },
+          "TreeSet",
+          {
+            "@renku_data_type": "type",
+            "@renku_data_value": "BTrees.OOBTree.OOTreeSet"
+          },
+          "attrname",
+          "downstream",
+          "call",
+          false,
+          "difference",
+          {
+            "@renku_data_type": "function",
+            "@renku_data_value": "BTrees._OOBTree.difference"
+          },
+          "dump",
+          {
+            "@renku_data_type": "function",
+            "@renku_data_value": "renku.core.metadata.gateway.database_gateway.dump_activity"
+          },
+          "element",
+          {
+            "@renku_data_type": "zope.interface.interface.Attribute",
+            "@renku_data_value": {
+              "_Element__tagged_values": null,
+              "__doc__": "the downstream activities",
+              "__name__": "downstream",
+              "interface": {
+                "@renku_data_type": "type",
+                "@renku_data_value": "renku.core.metadata.gateway.database_gateway.IActivityDownstreamRelation"
+              }
+            }
+          },
+          "interface",
+          {
+            "@renku_data_type": "type",
+            "@renku_data_value": "renku.core.metadata.gateway.database_gateway.IActivityDownstreamRelation"
+          },
+          "intersection",
+          {
+            "@renku_data_type": "function",
+            "@renku_data_value": "BTrees._OOBTree.intersection"
+          },
+          "load",
+          {
+            "@renku_data_type": "function",
+            "@renku_data_value": "renku.core.metadata.gateway.database_gateway.load_activity"
+          },
+          "multiple",
+          false,
+          "multiunion",
+          null,
+          "name",
+          "downstream",
+          "union",
+          {
+            "@renku_data_type": "function",
+            "@renku_data_value": "BTrees._OOBTree.union"
+          }
+        ]
+      }
+    ]
+  },
+  "@renku_oid": "2048caf6440b4586b9ebacf5ebd5ab75df7f2391ad164e0197aad59311742842"
+}
\ No newline at end of file
--- a/.renku/metadata/23/5a/235ac7790cf1654d8160a95d0f806321bbb16795c81a647b2023fe912ea8d6ef
+++ b/.renku/metadata/23/5a/235ac7790cf1654d8160a95d0f806321bbb16795c81a647b2023fe912ea8d6ef
--- a/.renku/metadata/24/19/24196e843bc4fd0b1995e9c74aee393c444209998248556211174c2b7629c736
+++ b/.renku/metadata/24/19/24196e843bc4fd0b1995e9c74aee393c444209998248556211174c2b7629c736
--- a/.renku/metadata/27/0d/270dacc1630a4942964c94a5dc75720c603537c0bf864427b3332454a959c0d1
+++ b/.renku/metadata/27/0d/270dacc1630a4942964c94a5dc75720c603537c0bf864427b3332454a959c0d1
--- a/.renku/metadata/28/b5/28b5a750c38c4b939aec818a5fd46a514d8b8423d537437cb68d8529ad17b6c4
+++ b/.renku/metadata/28/b5/28b5a750c38c4b939aec818a5fd46a514d8b8423d537437cb68d8529ad17b6c4
--- a/.renku/metadata/2b/e4/2be4a0c03ddc30ef89206375613eb05d81689f4ceb7eedfc2373c597f8006da2
+++ b/.renku/metadata/2b/e4/2be4a0c03ddc30ef89206375613eb05d81689f4ceb7eedfc2373c597f8006da2
--- a/.renku/metadata/41/1c/411c9b0cbf3e4dcaaaabf867bc8da3e76f4d71d0450c47c4bac381312454d7c4
+++ b/.renku/metadata/41/1c/411c9b0cbf3e4dcaaaabf867bc8da3e76f4d71d0450c47c4bac381312454d7c4
--- a/.renku/metadata/47/d6/47d68781f644466fb5dc14905da701c205aa550ead04499d8e92305d822d2a1c
+++ b/.renku/metadata/47/d6/47d68781f644466fb5dc14905da701c205aa550ead04499d8e92305d822d2a1c