renku run papermill notebooks/theory/theory.ipynb notebooks/theory/theory.ran.ipynb -p output_path_variable notebooks/theory/pyFile_storage/theory_variable.py -p output_path_equation notebooks/theory/pyFile_storage/theory_equation.py

renku run papermill notebooks/scen1/naive_run/evaluation.ipynb notebooks/scen1/naive_run/evaluation.ran.ipynb -p path_variable  notebooks/theory/pyFile_storage/theory_variable.py -p path_equation notebooks/theory/pyFile_storage/theory_equation.py -p parameter_file notebooks/scen1/calibration/dry_season.txt -p inputfile data/howard_spring_l4/HowardSprings_L4.nc -p export_visual_scen1 graphs/scen1/visual_expl_dry.png -p output_path_scenario1_DataSet data/howard_spring_l4/scenario1_DataSet_dry.nc

renku run papermill notebooks/scen1/naive_run/evaluation.ipynb notebooks/scen1/naive_run/evaluation.ran.ipynb -p path_variable  notebooks/theory/pyFile_storage/theory_variable.py -p path_equation notebooks/theory/pyFile_storage/theory_equation.py -p parameter_file notebooks/scen1/calibration/wet_season.txt -p inputfile data/howard_spring_l4/HowardSprings_L4.nc -p export_visual_scen1 graphs/scen1/visual_expl_wet.png -p output_path_scenario1_DataSet data/howard_spring_l4/scenario1_DataSet_wet.nc

renku run papermill notebooks/scen1/naive_run/analysis.ipynb notebooks/scen1/naive_run/analysis.ran.ipynb -p inputfile_sce1 data/howard_spring_l4/scenario1_DataSet_dry.nc -p export_sc1_mes_VS_model graphs/scen1/dry/mes_sc1_VS_model_dry.png -p export_sc1_month_invest graphs/scen1/dry/mes_sc1_month_invest_dry.png -p path_analysis_functions notebooks/theory/pyFile_storage/analysis_functions.py -p export_sc1_hist_RMSE_NS graphs/scen1/dry/mes_sc1_hist_RMSE_NS_dry.png -p export_sc1_hist_month graphs/scen1/dry/mes_sc1_hist_month_dry.png

renku run papermill notebooks/scen1/naive_run/analysis.ipynb notebooks/scen1/naive_run/analysis.ran.ipynb -p inputfile_sce1 data/howard_spring_l4/scenario1_DataSet_wet.nc -p export_sc1_mes_VS_model graphs/scen1/wet/mes_sc1_VS_model_wet.png -p export_sc1_month_invest graphs/scen1/wet/mes_sc1_month_invest_wet.png -p path_analysis_functions notebooks/theory/pyFile_storage/analysis_functions.py -p export_sc1_hist_RMSE_NS graphs/scen1/wet/mes_sc1_hist_RMSE_NS_wet.png -p export_sc1_hist_month graphs/scen1/wet/mes_sc1_hist_month_wet.png

renku run papermill notebooks/scen1/calibration/calibration.ipynb notebooks/scen1/calibration/calibration.ran.ipynb -p path_variable 'notebooks/theory/pyFile_storage/theory_variable.py' -p path_equation 'notebooks/theory/pyFile_storage/theory_equation.py' -p path_analysis_functions 'notebooks/theory/pyFile_storage/analysis_functions.py' -p inputfile 'data/howard_spring_l4/HowardSprings_L4.nc' -p wet_name "notebooks/scen1/calibration/wet_season.txt" -p dry_name "notebooks/scen1/calibration/dry_season.txt" -p graph_perf "graphs/scen1/calibration_perf.png" -p graph_cube "graphs/scen1/calibration_cube.png"

renku run papermill notebooks/scen2/model_run/evaluation_PM.ipynb notebooks/scen2/model_run/evaluation_PM.ran.ipynb -p path_variable notebooks/theory/pyFile_storage/theory_variable.py -p path_equation notebooks/theory/pyFile_storage/theory_equation.py -p inputfile data/howard_spring_l4/HowardSprings_L4.nc -p path_graph graphs/scen2/ -p output_path_scenario2_DataSet data/howard_spring_l4/scenario2_Dataset.nc