simpler_model.ipynb : modified the time serie plot (moving average of 3 days),...

simpler_model.ipynb : modified the time serie plot (moving average of 3 days), added RVE and MAE as metrics, created pandas data frame out of it and export them as tex tables, modify remku command to account for tex files

Renku_commands.txt

@@ -20,4 +20,4 @@ renku run papermill notebooks/Finished_project/location_stress_factor/location_s
 
 renku run papermill notebooks/Finished_project/meaning_stress_factor/meaning_stress_factor.ipynb notebooks/Finished_project/meaning_stress_factor/meaning_stress_factor.ran.ipynb -p path_variable notebooks/theory/pyFile_storage/theory_variable.py -p path_equation notebooks/theory/pyFile_storage/theory_equation.py -p path_analysis_functions notebooks/theory/pyFile_storage/analysis_functions.py -p path_data data/eddycovdata/ -p dates_fPAR data/fpar_howard_spring/dates_v5 -p stress_factor_reconstruct notebooks/Finished_project/meaning_stress_factor/stress_factor_reconstruct.png -p constant_VS_fPAR notebooks/Finished_project/meaning_stress_factor/constant_VS_fPAR.png -p complete_VS_incomplete notebooks/Finished_project/meaning_stress_factor/complete_VS_incomplete.png
 
-renku run papermill notebooks/Finished_project/simpler_model/simpler_model.ipynb notebooks/Finished_project/simpler_model/simpler_model.ran.ipynb -p path_variable notebooks/theory/pyFile_storage/theory_variable.py -p path_equation notebooks/theory/pyFile_storage/theory_equation.py -p path_analysis_functions notebooks/theory/pyFile_storage/analysis_functions.py -p path_data data/eddycovdata/ -p dates_fPAR data/fpar_howard_spring/dates_v5 -p timeSerie_oneSite_oneYear notebooks/Finished_project/simpler_model/timeSerie_oneSite_oneYear.png -p inverseModelling notebooks/Finished_project/simpler_model/inverseModelling.png -p Influence_atmo_E_dry notebooks/Finished_project/simpler_model/Influence_atmo_E_dry.png -p Influence_atmo_E_wet notebooks/Finished_project/simpler_model/Influence_atmo_E_wet.png -p Influence_atmo_rel_dry notebooks/Finished_project/simpler_model/Influence_atmo_rel_dry.png -p Influence_atmo_rel_wet notebooks/Finished_project/simpler_model/Influence_atmo_rel_wet.png -p sensitivity_parameters notebooks/Finished_project/simpler_model/sensitivity_parameters.png -p statistical_assessment notebooks/Finished_project/simpler_model/statistical_assessment.png -p different_sites notebooks/Finished_project/simpler_model/different_sites.png
\ No newline at end of file
+renku run papermill notebooks/Finished_project/simpler_model/simpler_model.ipynb notebooks/Finished_project/simpler_model/simpler_model.ran.ipynb -p path_variable notebooks/theory/pyFile_storage/theory_variable.py -p path_equation notebooks/theory/pyFile_storage/theory_equation.py -p path_analysis_functions notebooks/theory/pyFile_storage/analysis_functions.py -p path_data data/eddycovdata/ -p dates_fPAR data/fpar_howard_spring/dates_v5 -p timeSerie_oneSite_oneYear notebooks/Finished_project/simpler_model/timeSerie_oneSite_oneYear.png -p inverseModelling notebooks/Finished_project/simpler_model/inverseModelling.png -p Influence_atmo_E_dry notebooks/Finished_project/simpler_model/Influence_atmo_E_dry.png -p Influence_atmo_E_wet notebooks/Finished_project/simpler_model/Influence_atmo_E_wet.png -p Influence_atmo_rel_dry notebooks/Finished_project/simpler_model/Influence_atmo_rel_dry.png -p Influence_atmo_rel_wet notebooks/Finished_project/simpler_model/Influence_atmo_rel_wet.png -p sensitivity_parameters notebooks/Finished_project/simpler_model/sensitivity_parameters.png -p statistical_assessment notebooks/Finished_project/simpler_model/statistical_assessment.png -p different_sites notebooks/Finished_project/simpler_model/different_sites.png -p tex_file_whole notebooks/Finished_project/simpler_model/latex_files/whole_year.tex -p tex_file_dry notebooks/Finished_project/simpler_model/latex_files/dry_season.tex -p tex_file_wet notebooks/Finished_project/simpler_model/latex_files/wet_season.tex
\ No newline at end of file

notebooks/Finished_project/simpler_model/latex_files/whole_year.tex

+\begin{tabular}{lrrrrrrrr}
+\toprule
+{} &  Varying\_gS &  Constant\_gS &  Mod\_var\_gS &  Mod\_cst\_gS &   fPAR\_PM &  PT\_model &  Bench\_PM &  Bench\_PT \\
+\midrule
+RMSE &    0.867409 &     0.924532 &    0.931554 &    1.038747 &  1.789343 &  0.899593 &  3.849381 &  1.845079 \\
+NS   &    0.709874 &     0.670403 &    0.665378 &    0.583937 & -0.234599 &  0.687945 & -4.713745 & -0.312710 \\
+RVE  &    0.024020 &    -0.002139 &    0.013361 &    0.024325 & -0.270482 &  0.021555 & -0.801912 & -0.364515 \\
+MAE  &    0.614918 &     0.692477 &    0.676997 &    0.799959 &  1.406583 &  0.619385 &  3.199727 &  1.600261 \\
+\bottomrule
+\end{tabular}