Commit 3616dc24 authored by Jeffrey Post's avatar Jeffrey Post
Browse files

Auto-saving for on branch master from commit a5bc2520

parent a5bc2520
Pipeline #139170 failed with stage
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......@@ -9,12 +9,14 @@ FROM renku/renkulab-r:4.0.0-renku0.10.4-0.6.3
# e.g. the following installs apt-utils and vim; each pkg on its own line, all lines
# except for the last end with backslash '\' to continue the RUN line
# USER root
# RUN apt-get update && \
# apt-get install -y --no-install-recommends \
USER root
RUN apt-get update && \
/opt/conda/bin/python3 -m pip install --upgrade pip && \
apt-get install -y --no-install-recommends \
conda update --all -y
# apt-utils \
# vim
# install the R dependencies
COPY install.R /tmp/
......@@ -22,4 +24,10 @@ RUN R -f /tmp/install.R
# install the python dependencies
COPY requirements.txt /tmp/
COPY environment.yml /tmp/
RUN pip3 install -r /tmp/requirements.txt
RUN conda env update -n base --file /tmp/environment.yml
USER root
RUN conda update --all -y
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