# For finding latest versions of the base image see # https://github.com/SwissDataScienceCenter/renkulab-docker ARG RENKU_BASE_IMAGE=renku/renkulab-r:4.0.0-0.7.3 FROM ${RENKU_BASE_IMAGE} # Uncomment and adapt if code is to be included in the image # COPY src /code/src # Uncomment and adapt if your R or python packages require extra linux (ubuntu) software # e.g. the following installs apt-utils and vim; each pkg on its own line, all lines # except for the last end with backslash '\' to continue the RUN line # # USER root # RUN apt-get update && \ # apt-get install -y --no-install-recommends \ # apt-utils \ # vim # USER ${NB_USER} # install the R dependencies COPY install.R /tmp/ RUN R -f /tmp/install.R # install the python dependencies COPY requirements.txt /tmp/ RUN pip3 install -r /tmp/requirements.txt # RENKU_VERSION determines the version of the renku CLI # that will be used in this image. To find the latest version, # visit https://pypi.org/project/renku/#history. ARG RENKU_VERSION=0.12.2 ######################################################## # Do not edit this section and do not add anything below RUN if [ -n "$RENKU_VERSION" ] ; then \ pipx uninstall renku && \ pipx install --force renku==${RENKU_VERSION} \ ; fi ########################################################