renku run ./code/cmd.sh --runThreadN 14 --genomeDir...

renku run ./code/cmd.sh --runThreadN 14 --genomeDir ./data/genome/celegans-genome/ --readFilesCommand zcat --outSAMtype BAM SortedByCoordinate --readFilesIn ./data/fastq/HIS3_L1_R1_001_iJ5odUOz5hnK.fastq.gz ./data/fastq/HIS3_L1_R1_002_oWBEHe65ouLY.fastq.gz ./data/fastq/HIS3_L1_R1_003_xfbNyg2J0vyg.fastq.gz --outFileNamePrefix ./data/mapped/HIS3