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# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord
# target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target
#------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- ---------------------
gb|KTF85840.1| - 1164 Paxillin PF03535.13 202 7.5e-69 222.1 20.1 1 2 7.5e-69 7.5e-69 222.1 20.1 2 202 204 401 203 401 0.89 hypothetical protein cypCar_00025934 [Cyprinus carpio]
gb|KTF85840.1| - 1164 Paxillin PF03535.13 202 7.5e-69 222.1 20.1 2 2 9.2 9.2 -3.5 2.4 97 97 484 484 407 555 0.60 hypothetical protein cypCar_00025934 [Cyprinus carpio]
gb|RXN08385.1| - 1180 Paxillin PF03535.13 202 5.6e-65 209.5 19.6 1 1 2.6e-64 2.6e-64 207.3 19.6 11 202 248 424 238 424 0.85 paxillin isoform X3 [Labeo rohita]
ref|XP_016362386.1| - 533 Paxillin PF03535.13 202 1.9e-64 207.7 19.9 1 1 5e-64 5e-64 206.4 19.9 2 202 45 229 44 229 0.91 PREDICTED: paxillin-like [Sinocyclocheilus anshuiensis]
gb|KAF4113872.1| - 533 Paxillin PF03535.13 202 3.8e-64 206.7 21.9 1 1 1.1e-63 1.1e-63 205.3 21.9 2 202 45 229 44 229 0.90 hypothetical protein G5714_006417 [Onychostema macrolepis]
ref|XP_016389709.1| - 516 Paxillin PF03535.13 202 2.3e-63 204.2 20.2 1 1 6.2e-63 6.2e-63 202.8 20.2 2 202 45 229 44 229 0.91 PREDICTED: paxillin-like [Sinocyclocheilus rhinocerous]
gb|ROL53783.1| - 1210 Paxillin PF03535.13 202 2.5e-63 204.1 20.7 1 3 0.74 0.74 0.1 0.3 108 155 87 134 79 141 0.85 Paxillin [Anabarilius grahami]
gb|ROL53783.1| - 1210 Paxillin PF03535.13 202 2.5e-63 204.1 20.7 2 3 2.5e-63 2.5e-63 204.1 20.7 2 202 206 390 205 390 0.91 Paxillin [Anabarilius grahami]
gb|ROL53783.1| - 1210 Paxillin PF03535.13 202 2.5e-63 204.1 20.7 3 3 2.5 2.5 -1.6 0.6 92 109 465 482 400 536 0.72 Paxillin [Anabarilius grahami]
ref|XP_016304400.1| - 454 Paxillin PF03535.13 202 2.5e-62 200.8 19.4 1 1 6.9e-62 6.9e-62 199.4 19.4 2 202 45 229 44 229 0.90 PREDICTED: paxillin-like isoform X3 [Sinocyclocheilus anshuiensis]
ref|XP_016304315.1| - 533 Paxillin PF03535.13 202 3.8e-62 200.2 19.4 1 1 9.8e-62 9.8e-62 198.9 19.4 2 202 45 229 44 229 0.90 PREDICTED: paxillin-like isoform X2 [Sinocyclocheilus anshuiensis]
ref|XP_026101848.1| - 734 Paxillin PF03535.13 202 4.3e-62 200.1 23.2 1 2 2.1 2.1 -1.3 0.2 58 93 71 106 56 110 0.74 paxillin-like isoform X4 [Carassius auratus]
ref|XP_026101848.1| - 734 Paxillin PF03535.13 202 4.3e-62 200.1 23.2 2 2 4.3e-62 4.3e-62 200.1 23.2 2 202 246 430 245 430 0.90 paxillin-like isoform X4 [Carassius auratus]
ref|XP_016418196.1| - 1085 Paxillin PF03535.13 202 5e-62 199.8 20.7 1 1 5e-62 5e-62 199.8 20.7 2 202 45 229 44 229 0.90 PREDICTED: proteoglycan 4-like [Sinocyclocheilus rhinocerous]
ref|XP_026096319.1| - 533 Paxillin PF03535.13 202 5.1e-62 199.8 18.5 1 1 1.4e-61 1.4e-61 198.4 18.5 2 202 45 229 44 229 0.90 paxillin-like isoform X4 [Carassius auratus]
ref|XP_026101829.1| - 1092 Paxillin PF03535.13 202 8.3e-62 199.1 23.2 1 1 8.3e-62 8.3e-62 199.1 23.2 2 202 45 229 44 229 0.90 LIM domain-binding protein 3-like isoform X2 [Carassius auratus]
ref|XP_026096317.1| - 681 Paxillin PF03535.13 202 8.3e-62 199.1 18.5 1 1 2.2e-61 2.2e-61 197.7 18.5 2 202 193 377 192 377 0.90 paxillin-like isoform X2 [Carassius auratus]
ref|XP_026101823.1| - 1293 Paxillin PF03535.13 202 1.1e-61 198.8 23.2 1 2 3.6 3.6 -2.2 0.1 58 93 71 106 62 114 0.74 proteoglycan 4-like isoform X1 [Carassius auratus]
ref|XP_026101823.1| - 1293 Paxillin PF03535.13 202 1.1e-61 198.8 23.2 2 2 1.1e-61 1.1e-61 198.8 23.2 2 202 246 430 245 430 0.90 proteoglycan 4-like isoform X1 [Carassius auratus]
ref|NP_963882.1| - 533 Paxillin PF03535.13 202 1.1e-61 198.7 20.9 1 1 3e-61 3e-61 197.3 20.9 2 202 45 229 44 229 0.89 paxillin a [Danio rerio]
ref|XP_016304258.1| - 622 Paxillin PF03535.13 202 1.3e-61 198.5 19.4 1 3 1.3e-61 1.3e-61 198.5 19.4 2 202 45 229 44 229 0.90 PREDICTED: mucin-5AC-like isoform X1 [Sinocyclocheilus anshuiensis]
ref|XP_016304258.1| - 622 Paxillin PF03535.13 202 1.3e-61 198.5 19.4 2 3 3.7 3.7 -2.2 3.1 97 106 307 316 237 380 0.63 PREDICTED: mucin-5AC-like isoform X1 [Sinocyclocheilus anshuiensis]
ref|XP_016304258.1| - 622 Paxillin PF03535.13 202 1.3e-61 198.5 19.4 3 3 6.5 6.5 -3.0 2.2 116 151 393 428 358 435 0.74 PREDICTED: mucin-5AC-like isoform X1 [Sinocyclocheilus anshuiensis]
ref|XP_026096316.1| - 724 Paxillin PF03535.13 202 2.5e-61 197.6 18.5 1 2 4.9 4.9 -2.6 0.1 17 179 98 137 84 154 0.50 paxillin-like isoform X1 [Carassius auratus]
ref|XP_026096316.1| - 724 Paxillin PF03535.13 202 2.5e-61 197.6 18.5 2 2 2.5e-61 2.5e-61 197.6 18.5 2 202 236 420 235 420 0.90 paxillin-like isoform X1 [Carassius auratus]
ref|XP_016096561.1| - 1080 Paxillin PF03535.13 202 5.3e-60 193.2 18.5 1 2 5.3e-60 5.3e-60 193.2 18.5 2 202 45 227 44 228 0.89 PREDICTED: calphotin-like [Sinocyclocheilus grahami]
ref|XP_016096561.1| - 1080 Paxillin PF03535.13 202 5.3e-60 193.2 18.5 2 2 1.8 1.8 -1.2 0.3 91 129 237 279 229 299 0.68 PREDICTED: calphotin-like [Sinocyclocheilus grahami]
ref|XP_018965205.1| - 423 Paxillin PF03535.13 202 3.5e-50 161.2 8.1 1 2 3.5e-50 3.5e-50 161.2 8.1 83 202 1 119 1 119 0.97 PREDICTED: paxillin-like [Cyprinus carpio]
ref|XP_018965205.1| - 423 Paxillin PF03535.13 202 3.5e-50 161.2 8.1 2 2 7.3 7.3 -3.1 0.1 84 97 167 180 136 182 0.66 PREDICTED: paxillin-like [Cyprinus carpio]
ref|XP_026101837.1| - 982 Paxillin PF03535.13 202 2.3e-46 148.7 9.2 1 1 2.3e-46 2.3e-46 148.7 9.2 83 202 1 119 1 119 0.93 LIM domain-binding protein 3-like isoform X3 [Carassius auratus]
ref|XP_026096321.1| - 423 Paxillin PF03535.13 202 2.3e-46 148.7 5.9 1 2 2.3e-46 2.3e-46 148.7 5.9 83 202 1 119 1 119 0.96 paxillin-like isoform X5 [Carassius auratus]
ref|XP_026096321.1| - 423 Paxillin PF03535.13 202 2.3e-46 148.7 5.9 2 2 8.3 8.3 -3.3 0.0 84 97 167 180 142 182 0.70 paxillin-like isoform X5 [Carassius auratus]
#
# Program: hmmsearch
# Version: 3.3 (Nov 2019)
# Pipeline mode: SEARCH
# Query file: Paxillin.hmm
# Target file: high_scoring_hits.fasta
# Option settings: hmmsearch --domtblout domain_positions.txt Paxillin.hmm high_scoring_hits.fasta
# Current dir: /work/bio334_spring2020/data/exam_test
# Date: Tue May 26 07:54:43 2020
# [ok]