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Scaffold_1 7898 . T C 47.0072 PASS DP=8;VDB=0.0221621;SGB=-0.511536;RPB=0.450401;MQB=0.150134;MQSB=1;BQB=0.600535;MQ0F=0;AF1=0.5;AC1=1;DP4=4,1,3,0;MQ=53;FQ=50.0153;PV4=1,1,0,0.258799 GT:PL 0/1:77,0,130
Scaffold_1 7899 . G A 49.0072 PASS DP=8;VDB=0.0221621;SGB=-0.511536;RPB=0.450401;MQB=0.150134;MQSB=1;BQB=0.450401;MQ0F=0;AF1=0.5;AC1=1;DP4=4,1,3,0;MQ=53;FQ=52.0152;PV4=1,1,0,0.318863 GT:PL 0/1:79,0,124
Scaffold_1 7931 . C T 54.0072 PASS DP=7;VDB=0.0221621;SGB=-0.511536;RPB=0.28717;MQB=0.28717;MQSB=1;BQB=0.861511;MQ0F=0;AF1=0.5;AC1=1;DP4=2,1,3,0;MQ=51;FQ=56.6834;PV4=1,1,0,1 GT:PL 0/1:84,0,95
Scaffold_1 7932 . A G 52.0072 PASS DP=7;VDB=0.0249187;SGB=-0.511536;RPB=0.607698;MQB=0.202566;MQSB=1;BQB=0.810265;MQ0F=0;AF1=0.5;AC1=1;DP4=3,1,3,0;MQ=52;FQ=55.0099;PV4=1,1,0,1 GT:PL 0/1:82,0,111
Scaffold_1 7936 . C T 50.0072 PASS DP=7;VDB=0.0249187;SGB=-0.511536;RPB=0.607698;MQB=0.202566;MQSB=1;BQB=0.810265;MQ0F=0;AF1=0.5;AC1=1;DP4=3,1,3,0;MQ=52;FQ=53.0119;PV4=1,1,0,1 GT:PL 0/1:80,0,111
Scaffold_1 7937 . A G 50.0072 PASS DP=7;VDB=0.0221621;SGB=-0.511536;RPB=0.607698;MQB=0.202566;MQSB=1;BQB=1.01283;MQ0F=0;AF1=0.5;AC1=1;DP4=3,1,3,0;MQ=52;FQ=53.0147;PV4=1,1,0,1 GT:PL 0/1:80,0,118
Scaffold_1 7941 . C T 50.0072 PASS DP=7;VDB=0.0249187;SGB=-0.511536;RPB=0.861511;MQB=0.28717;MQSB=1;BQB=0.574341;MQ0F=0;AF1=0.5;AC1=1;DP4=2,1,3,0;MQ=51;FQ=52.947;PV4=1,0.0580583,0,1 GT:PL 0/1:80,0,98
Scaffold_1 7946 . C T 45.0072 PASS DP=7;VDB=0.0221621;SGB=-0.511536;RPB=0.861511;MQB=0.28717;MQSB=1;BQB=0.861511;MQ0F=0;AF1=0.5;AC1=1;DP4=2,1,3,0;MQ=51;FQ=47.3764;PV4=1,1,0,1 GT:PL 0/1:75,0,83
Scaffold_1 7949 . T C 55.0072 PASS DP=7;VDB=0.0221621;SGB=-0.511536;RPB=0;MQB=0;MQSB=1;BQB=0.666667;MQ0F=0;AF1=0.5;AC1=1;DP4=1,1,3,0;MQ=49;FQ=39.9473;PV4=0.4,0.247513,0,1 GT:PL 0/1:85,0,67
Scaffold_1 7954 . A C 26.0177 PASS DP=7;VDB=0.02;SGB=-0.453602;RPB=0.5;MQB=0;MQSB=1;BQB=0.5;MQ0F=0;AF1=0.499999;AC1=1;DP4=3,1,2,0;MQ=54;FQ=29.0204;PV4=1,1,0,1 GT:PL 0/1:56,0,102
Scaffold_1 7964 . C T 39.0076 PASS DP=8;VDB=0.0249187;SGB=-0.511536;RPB=0.607698;MQB=0.202566;MQSB=0.4;BQB=1.01283;MQ0F=0;AF1=0.5;AC1=1;DP4=2,2,3,0;MQ=52;FQ=42.0153;PV4=0.428571,0.395921,0,1 GT:PL 0/1:69,0,115
Scaffold_1 7979 . A T 50.0072 PASS DP=6;VDB=0.0249187;SGB=-0.511536;RPB=0.861511;MQB=0.28717;MQSB=1;BQB=0.861511;MQ0F=0;AF1=0.5;AC1=1;DP4=2,1,3,0;MQ=51;FQ=52.6834;PV4=1,1,0,1 GT:PL 0/1:80,0,91
Scaffold_1 7980 . C G 26.0177 PASS DP=6;VDB=0.02;SGB=-0.453602;RPB=0.666667;MQB=0;MQSB=1;BQB=0.833333;MQ0F=0;AF1=0.499999;AC1=1;DP4=2,1,2,0;MQ=53;FQ=29.0202;PV4=1,0.39439,0,1 GT:PL 0/1:56,0,98
Scaffold_1 7983 . C A 52.0072 PASS DP=6;VDB=0.0264014;SGB=-0.511536;RPB=0.861511;MQB=0.28717;MQSB=1;BQB=0.574341;MQ0F=0;AF1=0.5;AC1=1;DP4=2,1,3,0;MQ=51;FQ=52.4763;PV4=1,1,0,1 GT:PL 0/1:82,0,83
Scaffold_1 7996 . A G 28.0151 PASS DP=5;VDB=0.02;SGB=-0.453602;RPB=1;MQB=1;MQSB=1;BQB=1;MQ0F=0;AF1=0.500157;AC1=1;DP4=0,1,2,0;MQ=48;FQ=6.19624;PV4=0.333333,0.333333,0,1 GT:PL 0/1:58,0,32
Scaffold_1 8011 . G A 39.0144 PASS DP=5;VDB=0.0264014;SGB=-0.511536;RPB=1;MQB=1;MQSB=1;BQB=1;MQ0F=0;AF1=0.500792;AC1=1;DP4=0,1,3,0;MQ=46;FQ=-4.11561;PV4=0.25,0.312683,0,0.0101021 GT:PL 0/1:69,0,25
Scaffold_1 8057 . T A 47.0072 PASS DP=6;VDB=0.0481132;SGB=-0.511536;RPB=0.28717;MQB=0.28717;MQSB=0.25;BQB=0.861511;MQ0F=0;AF1=0.5;AC1=1;DP4=2,1,0,3;MQ=56;FQ=49.6014;PV4=0.4,1,0.0386778,0.18695 GT:PL 0/1:77,0,87
Scaffold_1 8063 . T A 31.0104 PASS DP=6;VDB=0.06;SGB=-0.453602;RPB=0;MQB=0;MQSB=0.333333;BQB=1;MQ0F=0;AF1=0.5;AC1=1;DP4=2,1,0,2;MQ=56;FQ=34.0164;PV4=0.4,1,0.0415595,1 GT:PL 0/1:61,0,101
Scaffold_1 8064 . T C 51.0072 PASS DP=7;VDB=0.0506481;SGB=-0.511536;RPB=0.28717;MQB=0.28717;MQSB=0.25;BQB=0.861511;MQ0F=0;AF1=0.5;AC1=1;DP4=2,1,0,3;MQ=56;FQ=53.9295;PV4=0.4,0.18695,0.0386778,0.18695 GT:PL 0/1:81,0,98
Scaffold_1 8068 . A C 43.0073 PASS DP=9;VDB=0.0506481;SGB=-0.511536;RPB=0.924584;MQB=0.115573;MQSB=0.577865;BQB=0.924584;MQ0F=0;AF1=0.5;AC1=1;DP4=3,3,0,3;MQ=57;FQ=46.0153;PV4=0.464286,0.342264,0.00430914,1 GT:PL 0/1:73,0,172
Scaffold_1 8106 . C T 31.0104 PASS DP=12;VDB=0.0588947;SGB=-0.511536;RPB=0.596251;MQB=0.0443614;MQSB=0.594978;BQB=0.933909;MQ0F=0;AF1=0.5;AC1=1;DP4=4,5,0,3;MQ=58;FQ=34.0168;PV4=0.490909,1,0.000507519,1 GT:PL 0/1:61,0,206
Scaffold_1 8142 . G T 43.0073 PASS DP=13;VDB=0.074936;SGB=-0.511536;RPB=0.360295;MQB=0.0497871;MQSB=0.475476;BQB=0.954207;MQ0F=0;AF1=0.5;AC1=1;DP4=5,3,0,3;MQ=58;FQ=46.0153;PV4=0.181818,0.386209,0.00103105,0.413075 GT:PL 0/1:73,0,228
Scaffold_1 9958 . G T 10.42 PASS DP=13;VDB=0.02;SGB=-0.453602;RPB=0.8;MQB=1;MQSB=1;BQB=0.7;MQ0F=0;AF1=0.499975;AC1=1;DP4=2,8,2,0;MQ=60;FQ=13.2265;PV4=0.0909091,1,1,1 GT:PL 0/1:40,0,219
Scaffold_1 16431 . T C 13.2188 PASS DP=10;VDB=0.02;SGB=-0.453602;RPB=0.625;MQB=1;MQSB=1;BQB=0.8125;MQ0F=0;AF1=0.499987;AC1=1;DP4=6,2,2,0;MQ=60;FQ=16.1222;PV4=1,1,1,1 GT:PL 0/1:43,0,198
Scaffold_1 21261 . A C 23.7825 PASS DP=2;VDB=0.36;SGB=-0.453602;MQ0F=0;AF1=1;AC1=2;DP4=0,0,2,0;MQ=30;FQ=-32.988 GT:PL 1/1:55,6,0
Scaffold_1 26483 . T G 122.008 PASS DP=72;VDB=0.972204;SGB=-0.693145;RPB=0.9721;MQB=0.00399733;MQSB=0.831986;BQB=0.644598;MQ0F=0.194444;AF1=0.5;AC1=1;DP4=10,12,9,32;MQ=25;FQ=125.016;PV4=0.0830886,0.10172,0.000598225,0.076551 GT:PL 0/1:152,0,230
Scaffold_1 29292 . G A 13.2188 PASS DP=7;VDB=0.02;SGB=-0.453602;RPB=0;MQB=1;MQSB=1;BQB=0.5;MQ0F=0;AF1=0.499987;AC1=1;DP4=2,3,0,2;MQ=60;FQ=16.1222;PV4=1,0.283247,1,1 GT:PL 0/1:43,0,143
Scaffold_1 46377 . C T 13.2188 PASS DP=10;VDB=0.02;SGB=-0.453602;RPB=0.5;MQB=1;MQSB=0.916482;BQB=0.75;MQ0F=0;AF1=0.499987;AC1=1;DP4=7,1,0,2;MQ=60;FQ=16.1222;PV4=0.0666667,0.272369,1,1 GT:PL 0/1:43,0,185
Scaffold_1 49689 . G A 111.008 PASS DP=13;VDB=0.832832;SGB=-0.636426;RPB=0.253351;MQB=0.838008;MQSB=0.542126;BQB=0.760054;MQ0F=0;AF1=0.5;AC1=1;DP4=5,0,1,6;MQ=51;FQ=88.0049;PV4=0.0151515,0.118585,0.192753,0.229045 GT:PL 0/1:141,0,115
Scaffold_1 49701 . A G 67.0074 PASS DP=11;VDB=0.588406;SGB=-0.590765;RPB=0.523791;MQB=0.428556;MQSB=0.428556;BQB=0.666643;MQ0F=0;AF1=0.5;AC1=1;DP4=5,0,0,5;MQ=49;FQ=70.0018;PV4=0.00793651,0.0908591,0.0760915,0.272369 GT:PL 0/1:97,0,122
Scaffold_1 49770 . T C 33.0091 PASS DP=9;VDB=0.921489;SGB=-0.511536;RPB=0.900802;MQB=0.150134;MQSB=0.166667;BQB=0.750668;MQ0F=0;AF1=0.5;AC1=1;DP4=5,0,1,2;MQ=50;FQ=36.0127;PV4=0.107143,1,0.00352577,0.173732 GT:PL 0/1:63,0,94
Scaffold_1 49797 . C T 62.0073 PASS DP=10;VDB=0.820274;SGB=-0.556411;RPB=0.243649;MQB=0.162433;MQSB=0.346719;BQB=0.487298;MQ0F=0;AF1=0.5;AC1=1;DP4=4,1,2,2;MQ=48;FQ=65.0153;PV4=0.52381,0.113822,0.00361217,0.412278 GT:PL 0/1:92,0,136
Scaffold_1 49800 . T C 67.0074 PASS DP=9;VDB=0.824414;SGB=-0.556411;RPB=0.607698;MQB=0.405132;MQSB=0.607698;BQB=1.01283;MQ0F=0;AF1=0.5;AC1=1;DP4=2,1,2,2;MQ=44;FQ=63.8221;PV4=1,0.317452,0.0242337,0.0607255 GT:PL 0/1:97,0,92
Scaffold_1 49867 . T C 182.009 PASS DP=13;VDB=0.258129;SGB=-0.670168;RPB=0.699673;MQB=0.597928;MQSB=0.899815;BQB=0.699673;MQ0F=0;AF1=0.500016;AC1=1;DP4=1,2,5,5;MQ=50;FQ=15.1496;PV4=1,1,0.300342,1 GT:PL 0/1:212,0,42
Scaffold_1 49928 . C T 205.009 PASS DP=15;VDB=0.456924;SGB=-0.670168;RPB=0.161621;MQB=0.444858;MQSB=0.923116;BQB=0.367879;MQ0F=0;AF1=0.5;AC1=1;DP4=0,4,5,5;MQ=52;FQ=35.0165;PV4=0.220779,1,0.375278,0.495982 GT:PL 0/1:235,0,62
Scaffold_1 49940 . T C 186.009 PASS DP=15;VDB=0.0576189;SGB=-0.651104;RPB=0.236382;MQB=0.646425;MQSB=0.95494;BQB=0.94394;MQ0F=0;AF1=0.5;AC1=1;DP4=0,4,5,3;MQ=55;FQ=66.0155;PV4=0.0808081,1,1,1 GT:PL 0/1:216,0,93
Scaffold_1 50053 . T C 116.008 PASS DP=8;VDB=0.870455;SGB=-0.590765;RPB=0.300267;MQB=0.450401;MQSB=0.600535;BQB=0.750668;MQ0F=0;AF1=0.5;AC1=1;DP4=0,3,3,2;MQ=48;FQ=52.0153;PV4=0.196429,0.157361,1,0.258962 GT:PL 0/1:146,0,79
Scaffold_1 50055 . A G 99.0078 PASS DP=9;VDB=0.522837;SGB=-0.556411;RPB=0.202566;MQB=0.202566;MQSB=0.2;BQB=0.810265;MQ0F=0;AF1=0.5;AC1=1;DP4=0,3,2,2;MQ=49;FQ=53.0153;PV4=0.428571,1,1,0.276865 GT:PL 0/1:129,0,80
Scaffold_1 50086 . T G 130.008 PASS DP=9;VDB=0.844031;SGB=-0.616816;RPB=0.333333;MQB=0.333333;MQSB=0.300267;BQB=0.583333;MQ0F=0;AF1=0.500031;AC1=1;DP4=0,2,5,1;MQ=51;FQ=12.2797;PV4=0.107143,1,1,1 GT:PL 0/1:160,0,39
Scaffold_1 51083 . A G 149.067 PASS DP=8;VDB=0.00826614;SGB=-0.636426;MQSB=1.01283;MQ0F=0;AF1=1;AC1=2;DP4=0,0,4,3;MQ=40;FQ=-47.986 GT:PL 1/1:182,21,0
Scaffold_1 51097 . C T 182.033 PASS DP=9;VDB=0.00271581;SGB=-0.651104;MQSB=0.868321;MQ0F=0;AF1=1;AC1=2;DP4=0,0,4,4;MQ=39;FQ=-50.986 GT:PL 1/1:215,24,0
Scaffold_1 51149 . A G 203.016 PASS DP=10;VDB=0.765169;SGB=-0.662043;MQSB=0.577865;MQ0F=0;AF1=1;AC1=2;DP4=0,0,6,3;MQ=46;FQ=-53.9861 GT:PL 1/1:236,27,0
Scaffold_1 51194 . T C 178.067 PASS DP=8;VDB=0.664313;SGB=-0.636426;MQSB=0.810265;MQ0F=0;AF1=1;AC1=2;DP4=0,0,4,3;MQ=56;FQ=-47.986 GT:PL 1/1:211,21,0
Scaffold_1 56623 . T C 172.033 PASS DP=8;VDB=0.0597137;SGB=-0.651104;MQSB=1;MQ0F=0;AF1=1;AC1=2;DP4=0,0,7,1;MQ=60;FQ=-50.986 GT:PL 1/1:205,24,0
Scaffold_1 56749 . G C 173.033 PASS DP=9;VDB=0.100842;SGB=-0.651104;MQSB=1;MQ0F=0;AF1=1;AC1=2;DP4=0,0,1,7;MQ=60;FQ=-50.986 GT:PL 1/1:206,24,0
Scaffold_1 56843 . A G 222.008 PASS DP=13;VDB=0.117011;SGB=-0.670168;MQSB=0.916482;MQ0F=0;AF1=1;AC1=2;DP4=0,0,3,7;MQ=60;FQ=-56.9861 GT:PL 1/1:255,30,0
Scaffold_1 57322 . T G 138.264 PASS DP=5;VDB=0.0501588;SGB=-0.590765;MQSB=1;MQ0F=0;AF1=1;AC1=2;DP4=0,0,3,2;MQ=60;FQ=-41.9862 GT:PL 1/1:171,15,0
Scaffold_1 57323 . G T 138.264 PASS DP=5;VDB=0.0537672;SGB=-0.590765;MQSB=1;MQ0F=0;AF1=1;AC1=2;DP4=0,0,3,2;MQ=60;FQ=-41.9862 GT:PL 1/1:171,15,0
Scaffold_1 75470 . T G 55.0072 PASS DP=16;VDB=0.26019;SGB=-0.556411;RPB=0.298197;MQB=0.816687;MQSB=0.885987;BQB=0.997503;MQ0F=0;AF1=0.5;AC1=1;DP4=3,7,4,0;MQ=45;FQ=58.0154;PV4=0.0699301,0.269318,1,0.00632897 GT:PL 0/1:85,0,235
Scaffold_1 75490 . G A 52.0072 PASS DP=18;VDB=0.27062;SGB=-0.556411;RPB=0.594978;MQB=0.793923;MQSB=0.928603;BQB=0.66348;MQ0F=0;AF1=0.5;AC1=1;DP4=5,8,4,0;MQ=44;FQ=55.0154;PV4=0.0823529,1,1,1 GT:PL 0/1:82,0,255
Scaffold_1 75500 . C T 44.0073 PASS DP=18;VDB=0.249971;SGB=-0.556411;RPB=0.99361;MQB=0.99361;MQSB=0.737299;BQB=0.998399;MQ0F=0;AF1=0.5;AC1=1;DP4=6,7,4,0;MQ=45;FQ=47.0153;PV4=0.102941,1,1,1 GT:PL 0/1:74,0,255
Scaffold_1 75518 . C T 44.0073 PASS DP=19;VDB=0.249971;SGB=-0.556411;RPB=0.998751;MQB=0.988813;MQSB=0.724465;BQB=0.903707;MQ0F=0;AF1=0.5;AC1=1;DP4=8,7,4,0;MQ=45;FQ=47.0153;PV4=0.245098,1,1,1 GT:PL 0/1:74,0,255
Scaffold_1 75521 . T C 49.0072 PASS DP=19;VDB=0.249971;SGB=-0.556411;RPB=0.987392;MQB=0.950514;MQSB=0.636257;BQB=0.697047;MQ0F=0;AF1=0.5;AC1=1;DP4=7,7,4,0;MQ=46;FQ=52.0153;PV4=0.119281,1,1,1 GT:PL 0/1:79,0,255
Scaffold_1 75630 . G T 33.0091 PASS DP=14;VDB=0.0320192;SGB=-0.556411;RPB=0.0389611;MQB=0.878264;MQSB=0.47436;BQB=0.594978;MQ0F=0;AF1=0.5;AC1=1;DP4=5,3,1,3;MQ=52;FQ=36.0162;PV4=0.545455,0.251162,0.275557,0.0824059 GT:PL 0/1:63,0,180
Scaffold_1 80142 . T G 20.0499 PASS DP=6;VDB=0.84;SGB=-0.453602;RPB=0.5;MQB=0;MQSB=0;BQB=0.75;MQ0F=0;AF1=0.499997;AC1=1;DP4=0,4,2,0;MQ=51;FQ=23.0366;PV4=0.0666667,1,0.00734882,0.109642 GT:PL 0/1:50,0,108
Scaffold_1 80203 . G A 22.0341 PASS DP=5;VDB=0.58;SGB=-0.453602;RPB=0.333333;MQB=0;MQSB=0;BQB=1;MQ0F=0;AF1=0.499998;AC1=1;DP4=1,2,2,0;MQ=49;FQ=25.0286;PV4=0.4,1,0.0189898,0.136114 GT:PL 0/1:52,0,102
Scaffold_1 80487 . C T 93.0077 PASS DP=13;VDB=0.0821847;SGB=-0.556411;RPB=0.924449;MQB=0.924449;MQSB=0.683497;BQB=0.924449;MQ0F=0;AF1=0.5;AC1=1;DP4=3,4,3,1;MQ=53;FQ=96.0156;PV4=0.545455,1,1,1 GT:PL 0/1:123,0,166
Scaffold_1 80517 . A C 97.0078 PASS DP=13;VDB=0.131345;SGB=-0.556411;RPB=0.924449;MQB=0.924449;MQSB=0.742931;BQB=0.924449;MQ0F=0;AF1=0.5;AC1=1;DP4=3,4,2,2;MQ=53;FQ=100.016;PV4=1,1,1,1 GT:PL 0/1:127,0,179
Scaffold_1 80791 . A G 14.176 PASS DP=9;VDB=0.64;SGB=-0.453602;RPB=0.5;MQB=0.5;MQSB=0.75;BQB=0.666667;MQ0F=0;AF1=0.49999;AC1=1;DP4=2,4,0,2;MQ=49;FQ=17.1004;PV4=1,1,0.0890138,0.341717 GT:PL 0/1:44,0,157
Scaffold_1 80886 . G A 54.0072 PASS DP=10;VDB=0.0404803;SGB=-0.590765;RPB=0;MQB=0;MQSB=0;BQB=0.4;MQ0F=0;AF1=0.500001;AC1=1;DP4=0,2,5,0;MQ=40;FQ=28.0164;PV4=0.047619,0.137902,0.00213047,1 GT:PL 0/1:84,0,55
Scaffold_1 81441 . T C 100.008 PASS DP=14;VDB=0.133161;SGB=-0.590765;RPB=0.606531;MQB=0.99115;MQSB=0.885987;BQB=0.99115;MQ0F=0;AF1=0.5;AC1=1;DP4=4,5,3,2;MQ=55;FQ=103.016;PV4=1,1,0.492648,1 GT:PL 0/1:130,0,225
Scaffold_1 81934 . G A 26.0177 PASS DP=12;VDB=0.997127;SGB=-0.556411;RPB=0.924449;MQB=0.0803868;MQSB=0.829029;BQB=0.924449;MQ0F=0;AF1=0.499999;AC1=1;DP4=5,2,3,1;MQ=45;FQ=29.0205;PV4=1,0.175925,0.0157223,0.11716 GT:PL 0/1:56,0,179
Scaffold_1 82001 . A C 71.0074 PASS DP=16;VDB=0.255255;SGB=-0.636426;RPB=0.948864;MQB=0.148617;MQSB=0.981425;BQB=0.148617;MQ0F=0;AF1=0.5;AC1=1;DP4=6,1,2,5;MQ=47;FQ=74.0156;PV4=0.102564,0.034355,0.0268236,1 GT:PL 0/1:101,0,172
Scaffold_1 82137 . G A 17.0924 PASS DP=16;VDB=0.622417;SGB=-0.556411;RPB=0.816687;MQB=0.0223149;MQSB=0.686908;BQB=0.527292;MQ0F=0.0625;AF1=0.499995;AC1=1;DP4=7,3,2,2;MQ=53;FQ=20.058;PV4=0.58042,1,0.000579954,1 GT:PL 0/1:47,0,223
Scaffold_1 108396 . A T 157.009 PASS DP=14;VDB=0.121318;SGB=-0.670168;RPB=0.4;MQB=0;MQSB=0.9;BQB=0.4;MQ0F=0;AF1=0.500025;AC1=1;DP4=2,0,8,2;MQ=41;FQ=13.2265;PV4=1,0.136801,0.0144354,1 GT:PL 0/1:187,0,40
Scaffold_1 108403 . T C 187.009 PASS DP=14;VDB=0.166711;SGB=-0.676189;RPB=0.2628;MQB=0.0782001;MQSB=0.782349;BQB=0.823708;MQ0F=0;AF1=0.5;AC1=1;DP4=3,0,8,3;MQ=43;FQ=32.0178;PV4=1,0.482734,0.0189688,1 GT:PL 0/1:217,0,59
Scaffold_1 108413 . A T 177.009 PASS DP=15;VDB=0.286826;SGB=-0.662043;RPB=0.945959;MQB=0.606531;MQSB=0.782349;BQB=0.686908;MQ0F=0;AF1=0.5;AC1=1;DP4=5,0,6,3;MQ=43;FQ=87.0157;PV4=0.258242,0.0763394,0.32439,1 GT:PL 0/1:207,0,114
Scaffold_1 108415 . T G 182.009 PASS DP=15;VDB=0.176923;SGB=-0.676189;RPB=0.334895;MQB=0.0782001;MQSB=0.782349;BQB=0.416546;MQ0F=0;AF1=0.5;AC1=1;DP4=3,0,8,3;MQ=43;FQ=57.0154;PV4=1,0.022411,0.0189688,1 GT:PL 0/1:212,0,84
Scaffold_1 108424 . G C 197.009 PASS DP=16;VDB=0.331212;SGB=-0.680642;RPB=0.513417;MQB=0.129812;MQSB=0.880202;BQB=0.959189;MQ0F=0;AF1=0.5;AC1=1;DP4=3,0,9,3;MQ=45;FQ=48.0153;PV4=1,0.0516373,0.0324234,0.250046 GT:PL 0/1:227,0,75
Scaffold_1 108427 . T C 196.009 PASS DP=16;VDB=0.331212;SGB=-0.680642;RPB=0.513417;MQB=0.129812;MQSB=0.880202;BQB=0.430095;MQ0F=0;AF1=0.5;AC1=1;DP4=3,0,9,3;MQ=45;FQ=54.0154;PV4=1,0.0162361,0.0324234,0.232828 GT:PL 0/1:226,0,81
Scaffold_1 108429 . G A 178.009 PASS DP=17;VDB=0.532765;SGB=-0.670168;RPB=0.836992;MQB=0.976745;MQSB=0.945009;BQB=0.37005;MQ0F=0;AF1=0.5;AC1=1;DP4=6,0,7,3;MQ=46;FQ=84.0157;PV4=0.25,0.0494161,1,0.101103 GT:PL 0/1:208,0,111
Scaffold_1 108497 . C T 34.0087 PASS DP=24;VDB=0.0900131;SGB=-0.511536;RPB=0.107822;MQB=0.881383;MQSB=0.997381;BQB=0.454235;MQ0F=0;AF1=0.5;AC1=1;DP4=10,8,3,0;MQ=52;FQ=37.016;PV4=0.257143,1,1,0.144746 GT:PL 0/1:64,0,255
Scaffold_1 108656 . C T 37.0079 PASS DP=19;VDB=0.0353217;SGB=-0.651104;RPB=0.0452869;MQB=0.00180754;MQSB=0.449625;BQB=0.364027;MQ0F=0;AF1=0.5;AC1=1;DP4=5,5,1,7;MQ=48;FQ=40.0156;PV4=0.151584,0.0159197,8.82244e-07,1 GT:PL 0/1:67,0,246
Scaffold_1 108662 . A G 53.0072 PASS DP=18;VDB=0.00278439;SGB=-0.636426;RPB=0.0352938;MQB=0.0029283;MQSB=0.107822;BQB=0.591555;MQ0F=0;AF1=0.5;AC1=1;DP4=6,4,0,7;MQ=50;FQ=56.0154;PV4=0.0345023,1,3.26418e-06,1 GT:PL 0/1:83,0,227
Scaffold_1 108687 . C T 37.0079 PASS DP=16;VDB=0.018787;SGB=-0.636426;RPB=0.476686;MQB=0.0226609;MQSB=0.310516;BQB=0.507697;MQ0F=0;AF1=0.5;AC1=1;DP4=5,4,0,7;MQ=44;FQ=40.0156;PV4=0.0336538,1,0.000617181,1 GT:PL 0/1:67,0,199
Scaffold_1 108700 . A C 90.0077 PASS DP=17;VDB=0.184029;SGB=-0.670168;RPB=0.99881;MQB=0.0029283;MQSB=0.397295;BQB=0.970677;MQ0F=0;AF1=0.5;AC1=1;DP4=3,4,1,9;MQ=44;FQ=93.0158;PV4=0.25,0.426865,1.56995e-05,1 GT:PL 0/1:120,0,171
Scaffold_1 108777 . T C 39.0076 PASS DP=15;VDB=0.24773;SGB=-0.590765;RPB=0.141893;MQB=0.0137638;MQSB=0.679965;BQB=0.765017;MQ0F=0.0666667;AF1=0.5;AC1=1;DP4=4,4,1,4;MQ=51;FQ=42.0155;PV4=0.56488,1,0.000123568,0.334546 GT:PL 0/1:69,0,197
Scaffold_1 115482 . C A 13.2188 PASS DP=11;VDB=0.02;SGB=-0.453602;RPB=0.5;MQB=1;MQSB=1.00775;BQB=1;MQ0F=0;AF1=0.499987;AC1=1;DP4=4,4,0,2;MQ=60;FQ=16.1222;PV4=0.466667,1,1,1 GT:PL 0/1:43,0,210
Scaffold_1 125298 . A G 23.0285 PASS DP=10;VDB=0.235765;SGB=-0.511536;RPB=0.809011;MQB=0.115573;MQSB=0.162433;BQB=0.809011;MQ0F=0;AF1=0.499999;AC1=1;DP4=1,5,3,0;MQ=53;FQ=26.0258;PV4=0.047619,1,0.00177273,1 GT:PL 0/1:53,0,157
Scaffold_1 125329 . T C 18.0749 PASS DP=10;VDB=0.251321;SGB=-0.511536;RPB=0.641538;MQB=0.0916482;MQSB=0.167959;BQB=0.733186;MQ0F=0;AF1=0.499996;AC1=1;DP4=1,6,3,0;MQ=53;FQ=21.0492;PV4=0.0333333,0.137055,0.000755241,1 GT:PL 0/1:48,0,169
Scaffold_1 125525 . T G 15.1417 PASS DP=9;VDB=0.02;SGB=-0.453602;RPB=0.285714;MQB=0;MQSB=0.649731;BQB=0.785714;MQ0F=0;AF1=0.499992;AC1=1;DP4=4,3,0,2;MQ=56;FQ=18.0829;PV4=0.444444,1,0,1 GT:PL 0/1:45,0,176
Scaffold_1 125537 . A C 15.1417 PASS DP=9;VDB=0.02;SGB=-0.453602;RPB=0.571429;MQB=0;MQSB=0.487298;BQB=0.857143;MQ0F=0;AF1=0.499992;AC1=1;DP4=5,2,0,2;MQ=56;FQ=18.0829;PV4=0.166667,1,0,1 GT:PL 0/1:45,0,181
Scaffold_1 125555 . G A 26.0177 PASS DP=10;VDB=0.192436;SGB=-0.511536;RPB=0.809011;MQB=0.115573;MQSB=0.974597;BQB=0.809011;MQ0F=0;AF1=0.499999;AC1=1;DP4=3,3,1,2;MQ=53;FQ=29.0205;PV4=1,1,0.00142623,0.425248 GT:PL 0/1:56,0,179
Scaffold_1 125556 . T A 26.0177 PASS DP=10;VDB=0.192436;SGB=-0.511536;RPB=0.809011;MQB=0.115573;MQSB=0.974597;BQB=0.809011;MQ0F=0;AF1=0.499999;AC1=1;DP4=3,3,1,2;MQ=53;FQ=29.0205;PV4=1,1,0.00142623,0.437973 GT:PL 0/1:56,0,179
Scaffold_1 125564 . A G 21.0411 PASS DP=10;VDB=0.192436;SGB=-0.511536;RPB=0.733186;MQB=0.0916482;MQSB=0.904729;BQB=0.916482;MQ0F=0;AF1=0.499998;AC1=1;DP4=4,3,1,2;MQ=53;FQ=24.0321;PV4=1,1,0.000587906,1 GT:PL 0/1:51,0,191
Scaffold_1 125608 . C T 62.0073 PASS DP=11;VDB=0.610267;SGB=-0.556411;RPB=0.895781;MQB=0.279932;MQSB=1.00775;BQB=0.111973;MQ0F=0;AF1=0.5;AC1=1;DP4=2,4,2,2;MQ=48;FQ=65.0127;PV4=1,1,0.086251,1 GT:PL 0/1:92,0,124
Scaffold_1 125662 . A G 16.1143 PASS DP=13;VDB=0.578719;SGB=-0.511536;RPB=0.995736;MQB=0.151887;MQSB=0.962269;BQB=0.995736;MQ0F=0;AF1=0.499994;AC1=1;DP4=6,3,3,0;MQ=52;FQ=19.069;PV4=0.509091,1,0.0326405,1 GT:PL 0/1:46,0,199
Scaffold_1 125670 . C T 18.0749 PASS DP=12;VDB=0.658104;SGB=-0.556411;RPB=0.397295;MQB=0.0249144;MQSB=0.996401;BQB=0.878264;MQ0F=0;AF1=0.499996;AC1=1;DP4=5,3,3,1;MQ=52;FQ=21.0492;PV4=1,1,8.60319e-05,0.488685 GT:PL 0/1:48,0,202
Scaffold_1 125683 . A G 22.0341 PASS DP=11;VDB=0.578719;SGB=-0.511536;RPB=0.366593;MQB=0.0916482;MQSB=0.641538;BQB=0.641538;MQ0F=0;AF1=0.499998;AC1=1;DP4=4,3,3,0;MQ=53;FQ=25.0286;PV4=0.475,1,0.000587906,0.353993 GT:PL 0/1:52,0,190
Scaffold_1 125827 . A G 17.0924 PASS DP=9;VDB=0.06;SGB=-0.453602;RPB=0.285714;MQB=0;MQSB=0.346719;BQB=0.714286;MQ0F=0;AF1=0.499995;AC1=1;DP4=6,1,0,2;MQ=56;FQ=20.058;PV4=0.0833333,1,0,1 GT:PL 0/1:47,0,171
Scaffold_1 125919 . A G 19.061 PASS DP=11;VDB=0.839667;SGB=-0.511536;RPB=0.594025;MQB=0.0497871;MQSB=0.297172;BQB=0.954207;MQ0F=0;AF1=0.499997;AC1=1;DP4=6,2,0,3;MQ=54;FQ=22.0421;PV4=0.0606061,1,0.00024353,1 GT:PL 0/1:49,0,190
Scaffold_1 125929 . A C 19.061 PASS DP=13;VDB=0.833544;SGB=-0.511536;RPB=0.263597;MQB=0.0497871;MQSB=0.297172;BQB=0.829029;MQ0F=0;AF1=0.499997;AC1=1;DP4=6,2,0,3;MQ=54;FQ=22.0421;PV4=0.0606061,0.436084,0.00024353,0.121221 GT:PL 0/1:49,0,210
Scaffold_1 126733 . A G 12.272 PASS DP=15;VDB=0.490096;SGB=-0.511536;RPB=0.933909;MQB=0.0443614;MQSB=0.6821;BQB=0.995736;MQ0F=0;AF1=0.499984;AC1=1;DP4=6,3,1,2;MQ=54;FQ=15.1496;PV4=0.522727,1,8.82512e-07,1 GT:PL 0/1:42,0,216
Scaffold_1 126753 . A C 19.061 PASS DP=13;VDB=0.735663;SGB=-0.556411;RPB=0.793923;MQB=0.0249144;MQSB=0.542126;BQB=0.397295;MQ0F=0.0769231;AF1=0.499997;AC1=1;DP4=5,3,1,3;MQ=51;FQ=22.0421;PV4=0.545455,1,1.64597e-05,1 GT:PL 0/1:49,0,194
Scaffold_1 126777 . G A 18.0749 PASS DP=18;VDB=0.561811;SGB=-0.590765;RPB=1;MQB=0.00590723;MQSB=0.284796;BQB=0.412539;MQ0F=0.0555556;AF1=0.499996;AC1=1;DP4=7,6,0,5;MQ=53;FQ=21.0492;PV4=0.101307,1,1.7774e-08,1 GT:PL 0/1:48,0,255
Scaffold_1 126889 . A G 39.0076 PASS DP=22;VDB=0.0156816;SGB=-0.590765;RPB=0.992359;MQB=0.00727925;MQSB=0.867582;BQB=0.846161;MQ0F=0.0454545;AF1=0.5;AC1=1;DP4=7,9,2,3;MQ=53;FQ=42.0155;PV4=1,0.191873,9.3348e-06,1 GT:PL 0/1:69,0,255
Scaffold_1 127109 . G A 21.0411 PASS DP=15;VDB=0.0205346;SGB=-0.556411;RPB=0.826565;MQB=0.0211283;MQSB=0.953497;BQB=0.997028;MQ0F=0;AF1=0.499998;AC1=1;DP4=3,6,1,3;MQ=52;FQ=24.0321;PV4=1,1,5.7428e-12,1 GT:PL 0/1:51,0,217
Scaffold_1 127113 . A T 13.2188 PASS DP=14;VDB=0.0249187;SGB=-0.511536;RPB=1;MQB=0.0497871;MQSB=0.803868;BQB=0.829029;MQ0F=0;AF1=0.499987;AC1=1;DP4=3,5,1,2;MQ=53;FQ=16.1222;PV4=1,1,2.43654e-11,1 GT:PL 0/1:43,0,209
Scaffold_1 127139 . G A 19.061 PASS DP=15;VDB=0.0221621;SGB=-0.556411;RPB=0.94394;MQB=0.0249144;MQSB=0.935451;BQB=0.543691;MQ0F=0;AF1=0.499997;AC1=1;DP4=4,4,1,3;MQ=51;FQ=22.0421;PV4=0.575758,0.139461,6.28288e-11,1 GT:PL 0/1:49,0,202
Scaffold_1 127146 . C T 18.0749 PASS DP=15;VDB=0.0221621;SGB=-0.556411;RPB=0.697676;MQB=0.0183156;MQSB=0.997919;BQB=0.913931;MQ0F=0;AF1=0.499996;AC1=1;DP4=5,5,1,3;MQ=52;FQ=21.0492;PV4=0.58042,1,2.53833e-12,1 GT:PL 0/1:48,0,234
Scaffold_1 127183 . C A 16.1143 PASS DP=16;VDB=0.0221621;SGB=-0.556411;RPB=0.579578;MQB=0.0161635;MQSB=0.921243;BQB=0.735784;MQ0F=0;AF1=0.499994;AC1=1;DP4=6,5,1,3;MQ=53;FQ=19.069;PV4=0.569231,1,4.86527e-14,1 GT:PL 0/1:46,0,246
Scaffold_1 127819 . G A 15.1417 PASS DP=13;VDB=0.301053;SGB=-0.511536;RPB=0.540433;MQB=0.104279;MQSB=0.968069;BQB=0.382304;MQ0F=0.153846;AF1=0.499992;AC1=1;DP4=5,4,3,0;MQ=52;FQ=18.0829;PV4=0.490909,1,0.0366586,0.373785 GT:PL 0/1:45,0,208
Scaffold_1 127842 . A G 24.0241 PASS DP=13;VDB=0.115146;SGB=-0.556411;RPB=0.793923;MQB=0.0249144;MQSB=0.968069;BQB=0.236382;MQ0F=0.153846;AF1=0.499999;AC1=1;DP4=5,3,3,1;MQ=52;FQ=27.0236;PV4=1,1,0.000506292,1 GT:PL 0/1:54,0,202
Scaffold_1 127882 . G A 18.0749 PASS DP=17;VDB=0.409395;SGB=-0.556411;RPB=0.884706;MQB=0.0555762;MQSB=0.83527;BQB=0.405555;MQ0F=0.117647;AF1=0.499996;AC1=1;DP4=5,5,4,0;MQ=51;FQ=21.0492;PV4=0.220779,1,0.00712317,1 GT:PL 0/1:48,0,226
Scaffold_1 127931 . T C 13.2188 PASS DP=17;VDB=0.0949329;SGB=-0.556411;RPB=0.211556;MQB=0.046111;MQSB=0.954207;BQB=0.981007;MQ0F=0.0588235;AF1=0.499987;AC1=1;DP4=7,4,3,1;MQ=51;FQ=16.1222;PV4=1,0.407544,0.00509378,1 GT:PL 0/1:43,0,230
Scaffold_1 128081 . T C 36.0081 PASS DP=14;VDB=0.211317;SGB=-0.556411;RPB=0.096972;MQB=0.0320494;MQSB=0.961166;BQB=0.697593;MQ0F=0;AF1=0.5;AC1=1;DP4=5,4,2,2;MQ=51;FQ=39.0157;PV4=1,0.424343,8.69425e-05,1 GT:PL 0/1:66,0,221
Scaffold_1 128110 . T C 21.0411 PASS DP=12;VDB=0.559209;SGB=-0.511536;RPB=0.309786;MQB=0.360295;MQSB=0.683497;BQB=0.774755;MQ0F=0;AF1=0.499998;AC1=1;DP4=6,2,0,3;MQ=46;FQ=24.0321;PV4=0.0606061,1,0.0906393,0.340789 GT:PL 0/1:51,0,169
Scaffold_1 128134 . C T 21.0411 PASS DP=11;VDB=0.568985;SGB=-0.511536;RPB=0.954207;MQB=0.360295;MQSB=0.924449;BQB=0.472367;MQ0F=0;AF1=0.499998;AC1=1;DP4=4,4,0,3;MQ=46;FQ=24.0321;PV4=0.236364,1,0.0906393,1 GT:PL 0/1:51,0,171
Scaffold_1 128163 . A G 23.0285 PASS DP=10;VDB=0.568985;SGB=-0.511536;RPB=0.458241;MQB=0.366593;MQSB=0.895781;BQB=0.274945;MQ0F=0;AF1=0.499999;AC1=1;DP4=4,3,0,3;MQ=47;FQ=26.0258;PV4=0.2,1,0.116603,0.338154 GT:PL 0/1:53,0,139
Scaffold_1 130369 . C T 38.0077 PASS DP=13;VDB=0.192436;SGB=-0.511536;RPB=0.962269;MQB=0.151887;MQSB=0.95494;BQB=0.995736;MQ0F=0;AF1=0.5;AC1=1;DP4=6,3,1,2;MQ=52;FQ=41.0155;PV4=0.522727,1,0.100171,1 GT:PL 0/1:68,0,203
Scaffold_1 130378 . C T 38.0077 PASS DP=13;VDB=0.192436;SGB=-0.511536;RPB=0.879351;MQB=0.127819;MQSB=0.961166;BQB=0.748798;MQ0F=0;AF1=0.5;AC1=1;DP4=6,4,1,2;MQ=53;FQ=41.0155;PV4=0.559441,1,0.0800908,1 GT:PL 0/1:68,0,216
Scaffold_1 130388 . T G 37.0079 PASS DP=14;VDB=0.0821847;SGB=-0.556411;RPB=0.527292;MQB=0.0183156;MQSB=0.925999;BQB=0.527292;MQ0F=0;AF1=0.5;AC1=1;DP4=5,5,2,2;MQ=54;FQ=40.0156;PV4=1,1,3.7938e-05,1 GT:PL 0/1:67,0,237
Scaffold_1 130402 . C T 26.0177 PASS DP=14;VDB=0.192436;SGB=-0.511536;RPB=0.782349;MQB=0.1098;MQSB=0.925999;BQB=0.599223;MQ0F=0;AF1=0.499999;AC1=1;DP4=6,5,1,2;MQ=54;FQ=29.0205;PV4=1,0.190733,0.0642483,1 GT:PL 0/1:56,0,244
Scaffold_1 130422 . A G 38.0077 PASS DP=13;VDB=0.192436;SGB=-0.511536;RPB=0.649117;MQB=0.127819;MQSB=0.961166;BQB=0.879351;MQ0F=0;AF1=0.5;AC1=1;DP4=6,4,1,2;MQ=53;FQ=41.0155;PV4=0.559441,1,0.0800908,1 GT:PL 0/1:68,0,228
Scaffold_1 132919 . G T 34.0087 PASS DP=13;VDB=0.0221621;SGB=-0.511536;RPB=0.655816;MQB=0.954207;MQSB=0.954207;BQB=0.979382;MQ0F=0.0769231;AF1=0.5;AC1=1;DP4=3,5,0,3;MQ=57;FQ=37.016;PV4=0.490909,0.14849,1,1 GT:PL 0/1:64,0,203
Scaffold_1 137155 . C A 31.0446 PASS DP=7;VDB=0.02;SGB=-0.453602;RPB=0;MQB=0;MQSB=0.666667;BQB=0.666667;MQ0F=0;AF1=0.503994;AC1=1;DP4=2,1,0,2;MQ=39;FQ=-9.50228;PV4=0.4,1,1,1 GT:PL 0/1:61,0,18
Scaffold_1 157141 . A G 21.0411 PASS DP=7;VDB=0.06;SGB=-0.453602;RPB=0;MQB=0;MQSB=0.28717;BQB=0.5;MQ0F=0;AF1=0.499998;AC1=1;DP4=1,3,2,0;MQ=53;FQ=24.0321;PV4=0.4,1,0.000117087,0.0677065 GT:PL 0/1:51,0,114
Scaffold_1 157149 . C T 26.0177 PASS DP=7;VDB=0.14;SGB=-0.453602;RPB=0;MQB=0;MQSB=0.333333;BQB=0.666667;MQ0F=0;AF1=0.499999;AC1=1;DP4=1,2,2,0;MQ=53;FQ=29.0187;PV4=0.4,1,0,0.0242933 GT:PL 0/1:56,0,90
Scaffold_1 157151 . A G 48.0072 PASS DP=7;VDB=0.0506481;SGB=-0.511536;RPB=0.202566;MQB=0.202566;MQSB=0.202566;BQB=0.202566;MQ0F=0;AF1=0.5;AC1=1;DP4=1,3,3,0;MQ=52;FQ=50.981;PV4=0.142857,1,2.27251e-05,0.0652865 GT:PL 0/1:78,0,99
Scaffold_1 157173 . A G 49.0072 PASS DP=10;VDB=0.0846253;SGB=-0.556411;RPB=0.503877;MQB=0.0559863;MQSB=0.366593;BQB=0.503877;MQ0F=0;AF1=0.5;AC1=1;DP4=3,3,4,0;MQ=51;FQ=52.0153;PV4=0.2,0.0861735,3.76253e-05,0.337292 GT:PL 0/1:79,0,169
Scaffold_1 157177 . C T 35.0083 PASS DP=10;VDB=0.0797974;SGB=-0.556411;RPB=0.503877;MQB=0.0559863;MQSB=0.366593;BQB=0.0559863;MQ0F=0;AF1=0.5;AC1=1;DP4=3,3,4,0;MQ=51;FQ=38.0158;PV4=0.2,0.00322946,3.76253e-05,0.252863 GT:PL 0/1:65,0,176
Scaffold_1 157189 . C T 51.0072 PASS DP=10;VDB=0.0797974;SGB=-0.556411;RPB=0.503877;MQB=0.0559863;MQSB=0.366593;BQB=0.559863;MQ0F=0;AF1=0.5;AC1=1;DP4=3,3,4,0;MQ=51;FQ=54.0154;PV4=0.2,0.0615665,3.76253e-05,0.120752 GT:PL 0/1:81,0,176
Scaffold_1 157194 . C A 26.0177 PASS DP=10;VDB=0.160333;SGB=-0.511536;RPB=0.462292;MQB=0.115573;MQSB=0.462292;BQB=0.924584;MQ0F=0;AF1=0.499999;AC1=1;DP4=3,3,3,0;MQ=53;FQ=29.0205;PV4=0.464286,0.393294,0.000192377,1 GT:PL 0/1:56,0,172
Scaffold_1 157208 . T C 46.0072 PASS DP=11;VDB=0.0949329;SGB=-0.556411;RPB=0.763675;MQB=0.0401934;MQSB=0.472367;BQB=0.763675;MQ0F=0;AF1=0.5;AC1=1;DP4=4,3,4,0;MQ=52;FQ=49.0153;PV4=0.236364,0.216138,1.00453e-05,1 GT:PL 0/1:76,0,189
Scaffold_1 157264 . C A 36.0081 PASS DP=15;VDB=0.845044;SGB=-0.590765;RPB=0.13642;MQB=0.0194886;MQSB=1;BQB=0.896474;MQ0F=0;AF1=0.5;AC1=1;DP4=6,1,5,0;MQ=50;FQ=39.0157;PV4=1,0.269996,8.26996e-06,1 GT:PL 0/1:66,0,167
Scaffold_1 157268 . A G 40.0075 PASS DP=17;VDB=0.839591;SGB=-0.590765;RPB=0.184981;MQB=0.00920968;MQSB=0.615385;BQB=0.692463;MQ0F=0;AF1=0.5;AC1=1;DP4=8,2,5,0;MQ=52;FQ=43.0154;PV4=0.52381,1,1.88442e-07,1 GT:PL 0/1:70,0,206
Scaffold_1 157294 . A G 49.0072 PASS DP=18;VDB=0.0799024;SGB=-0.590765;RPB=0.448332;MQB=0.011109;MQSB=0.916667;BQB=0.726149;MQ0F=0;AF1=0.5;AC1=1;DP4=8,1,4,1;MQ=52;FQ=52.0153;PV4=1,0.123316,2.59609e-06,1 GT:PL 0/1:79,0,181
Scaffold_1 157318 . C T 84.0076 PASS DP=20;VDB=0.0536475;SGB=-0.636426;RPB=0.708895;MQB=0.0029283;MQSB=0.99446;BQB=0.621145;MQ0F=0;AF1=0.5;AC1=1;DP4=7,3,5,2;MQ=51;FQ=87.0157;PV4=1,0.102043,1.93538e-07,0.490771 GT:PL 0/1:114,0,216
Scaffold_1 157324 . A C 84.0076 PASS DP=19;VDB=0.0744703;SGB=-0.616816;RPB=0.968927;MQB=0.00408677;MQSB=0.982301;BQB=0.177544;MQ0F=0;AF1=0.5;AC1=1;DP4=9,2,5,1;MQ=52;FQ=87.0157;PV4=1,1,1.98219e-07,1 GT:PL 0/1:114,0,194
Scaffold_1 157330 . G A 77.0075 PASS DP=19;VDB=0.0478623;SGB=-0.590765;RPB=0.594648;MQB=0.00780539;MQSB=0.955084;BQB=0.140122;MQ0F=0;AF1=0.5;AC1=1;DP4=8,3,4,1;MQ=54;FQ=80.0157;PV4=1,1,1.57423e-07,1 GT:PL 0/1:107,0,223
Scaffold_1 157337 . G T 87.0076 PASS DP=21;VDB=0.0585364;SGB=-0.636426;RPB=0.930232;MQB=0.0018363;MQSB=0.995723;BQB=0.879351;MQ0F=0;AF1=0.5;AC1=1;DP4=9,3,5,2;MQ=52;FQ=90.0158;PV4=1,0.249368,1.87308e-08,1 GT:PL 0/1:117,0,218
Scaffold_1 157375 . G A 56.0072 PASS DP=20;VDB=0.0751808;SGB=-0.556411;RPB=0.997503;MQB=0.0183156;MQSB=0.923116;BQB=0.960789;MQ0F=0;AF1=0.5;AC1=1;DP4=6,4,3,1;MQ=55;FQ=59.0154;PV4=1,0.446017,1.62246e-12,1 GT:PL 0/1:86,0,223
Scaffold_1 157434 . T C 32.0097 PASS DP=10;VDB=0.985548;SGB=-0.511536;RPB=0.809011;MQB=0.115573;MQSB=0.89338;BQB=0.924584;MQ0F=0;AF1=0.5;AC1=1;DP4=3,3,1,2;MQ=52;FQ=35.0165;PV4=1,1,5.72614e-05,0.054816 GT:PL 0/1:62,0,176
Scaffold_1 157447 . C A 19.061 PASS DP=11;VDB=0.989527;SGB=-0.511536;RPB=0.809011;MQB=0.115573;MQSB=0.649731;BQB=0.809011;MQ0F=0;AF1=0.499997;AC1=1;DP4=4,2,1,2;MQ=52;FQ=22.0421;PV4=0.52381,0.205065,0.000123847,0.00547527 GT:PL 0/1:49,0,158
Scaffold_1 157474 . T C 40.0075 PASS DP=14;VDB=0.0284856;SGB=-0.590765;RPB=0.273507;MQB=0.0137638;MQSB=0.447727;BQB=0.935229;MQ0F=0;AF1=0.5;AC1=1;DP4=3,5,0,5;MQ=51;FQ=43.0154;PV4=0.230769,1,3.65139e-06,1 GT:PL 0/1:70,0,181
Scaffold_1 157483 . T C 54.0072 PASS DP=17;VDB=0.0307704;SGB=-0.590765;RPB=0.935451;MQB=0.0194886;MQSB=0.382304;BQB=0.760054;MQ0F=0;AF1=0.5;AC1=1;DP4=3,4,0,5;MQ=50;FQ=57.0154;PV4=0.204545,1,1.24169e-05,1 GT:PL 0/1:84,0,173
Scaffold_1 157507 . T C 60.0073 PASS DP=17;VDB=0.0347691;SGB=-0.616816;RPB=0.984496;MQB=0.00632972;MQSB=0.293091;BQB=0.745722;MQ0F=0;AF1=0.5;AC1=1;DP4=4,5,0,6;MQ=51;FQ=63.0154;PV4=0.103297,0.365135,9.28487e-07,1 GT:PL 0/1:90,0,223
Scaffold_1 157518 . G A 85.0076 PASS DP=17;VDB=0.0121409;SGB=-0.636426;RPB=0.86931;MQB=0.00385331;MQSB=0.368713;BQB=0.97784;MQ0F=0;AF1=0.5;AC1=1;DP4=3,6,0,7;MQ=50;FQ=88.0158;PV4=0.2125,0.394461,3.2128e-07,1 GT:PL 0/1:115,0,223
Scaffold_1 157546 . T A 76.0075 PASS DP=18;VDB=0.0096619;SGB=-0.636426;RPB=0.179237;MQB=0.0029283;MQSB=0.18243;BQB=0.79189;MQ0F=0;AF1=0.5;AC1=1;DP4=5,5,0,7;MQ=51;FQ=79.0156;PV4=0.0441176,0.111444,9.38786e-08,1 GT:PL 0/1:106,0,251
Scaffold_1 157570 . A G 48.0072 PASS DP=25;VDB=0.0120456;SGB=-0.616816;RPB=0.0455544;MQB=0.00170362;MQSB=0.301194;BQB=0.513103;MQ0F=0;AF1=0.5;AC1=1;DP4=8,9,0,6;MQ=54;FQ=51.0153;PV4=0.058179,1,1.23903e-10,1 GT:PL 0/1:78,0,255
Scaffold_1 157571 . C G 46.0072 PASS DP=25;VDB=0.0115144;SGB=-0.616816;RPB=0.0281319;MQB=0.00139213;MQSB=0.376297;BQB=0.241338;MQ0F=0;AF1=0.5;AC1=1;DP4=8,11,0,6;MQ=55;FQ=49.0153;PV4=0.12917,1,1.28491e-11,1 GT:PL 0/1:76,0,255
Scaffold_1 157581 . C T 55.0072 PASS DP=23;VDB=0.0120456;SGB=-0.616816;RPB=0.00433005;MQB=0.00247875;MQSB=0.180092;BQB=1;MQ0F=0;AF1=0.5;AC1=1;DP4=8,6,0,6;MQ=53;FQ=58.0154;PV4=0.0418989,1,3.7644e-09,0.00366299 GT:PL 0/1:85,0,255
Scaffold_1 164868 . G A 49.0072 PASS DP=18;VDB=0.0058656;SGB=-0.556411;RPB=0.284674;MQB=1;MQSB=0.241177;BQB=0.90252;MQ0F=0.111111;AF1=0.5;AC1=1;DP4=5,8,0,4;MQ=43;FQ=52.0153;PV4=0.260504,1,1,1 GT:PL 0/1:79,0,235
Scaffold_1 164941 . G A 63.0073 PASS DP=13;VDB=0.0058656;SGB=-0.556411;RPB=0.793923;MQB=0.94394;MQSB=0.857404;BQB=0.793923;MQ0F=0.153846;AF1=0.5;AC1=1;DP4=3,5,0,4;MQ=39;FQ=66.0155;PV4=0.490909,1,1,1 GT:PL 0/1:93,0,150
Scaffold_1 169893 . G A 19.061 PASS DP=27;VDB=0.172317;SGB=-0.556411;RPB=0.784272;MQB=0.897628;MQSB=0.324652;BQB=0.981425;MQ0F=0.222222;AF1=0.499997;AC1=1;DP4=14,6,4,0;MQ=35;FQ=22.0421;PV4=0.539243,0.388231,1,1 GT:PL 0/1:49,0,213
Scaffold_1 170254 . G A 64.0073 PASS DP=20;VDB=0.00563779;SGB=-0.636426;RPB=0.793985;MQB=0.793985;MQSB=0.906304;BQB=0.920307;MQ0F=0.15;AF1=0.5;AC1=1;DP4=3,8,2,5;MQ=38;FQ=67.0155;PV4=1,1,0.175433,1 GT:PL 0/1:94,0,148
Scaffold_1 170353 . T C 23.0285 PASS DP=15;VDB=0.00766117;SGB=-0.556411;RPB=0.236928;MQB=0.0183156;MQSB=0.527292;BQB=0.977751;MQ0F=0;AF1=0.499999;AC1=1;DP4=4,6,0,4;MQ=54;FQ=26.0258;PV4=0.250749,0.323839,0.000272669,1 GT:PL 0/1:53,0,248
Scaffold_1 170359 . A G 22.0341 PASS DP=15;VDB=0.0221621;SGB=-0.511536;RPB=0.2628;MQB=0.1098;MQSB=0.527292;BQB=0.823708;MQ0F=0;AF1=0.499998;AC1=1;DP4=4,7,0,3;MQ=54;FQ=25.0286;PV4=0.505495,0.162315,0.0962312,1 GT:PL 0/1:52,0,252
Scaffold_1 170360 . C T 13.2188 PASS DP=15;VDB=0.0249187;SGB=-0.511536;RPB=0.2628;MQB=0.1098;MQSB=0.527292;BQB=0.952672;MQ0F=0;AF1=0.499987;AC1=1;DP4=4,7,0,3;MQ=54;FQ=16.1222;PV4=0.505495,0.219766,0.0962312,1 GT:PL 0/1:43,0,242
Scaffold_1 170484 . T C 22.0341 PASS DP=41;VDB=0.00222545;SGB=-0.636426;RPB=0.472911;MQB=0.931558;MQSB=0.864283;BQB=0.277878;MQ0F=0.0243902;AF1=0.499998;AC1=1;DP4=16,15,3,4;MQ=36;FQ=25.0286;PV4=1,0.00543896,1,1 GT:PL 0/1:52,0,255
Scaffold_1 170553 . A C 50.0072 PASS DP=35;VDB=0.00194101;SGB=-0.636426;RPB=0.253662;MQB=0.929553;MQSB=0.976248;BQB=0.387999;MQ0F=0.0571429;AF1=0.5;AC1=1;DP4=13,9,3,4;MQ=37;FQ=53.0153;PV4=0.6665,0.192714,1,1 GT:PL 0/1:80,0,255
Scaffold_1 171968 . G C 20.0499 PASS DP=18;VDB=0.0588762;SGB=-0.616816;RPB=0.686279;MQB=0.0580147;MQSB=0.526391;BQB=0.779947;MQ0F=0.111111;AF1=0.499997;AC1=1;DP4=8,2,3,3;MQ=42;FQ=23.0366;PV4=0.299451,1,0.00506403,1 GT:PL 0/1:50,0,170
Scaffold_1 177174 . G T 60.2633 PASS DP=7;VDB=0.960975;SGB=-0.590765;MQSB=1;MQ0F=0;AF1=1;AC1=2;DP4=0,0,2,3;MQ=60;FQ=-41.9862 GT:PL 1/1:93,15,0
Scaffold_1 183619 . C T 12.272 PASS DP=20;VDB=0.267404;SGB=-0.511536;RPB=0.185266;MQB=0.148002;MQSB=0.284796;BQB=0.776754;MQ0F=0;AF1=0.499984;AC1=1;DP4=8,7,3,0;MQ=53;FQ=15.1496;PV4=0.245098,1,0.028018,0.00159661 GT:PL 0/1:42,0,255
Scaffold_1 183648 . A G 33.0091 PASS DP=19;VDB=0.112085;SGB=-0.556411;RPB=0.551238;MQB=0.0528036;MQSB=0.17984;BQB=0.832083;MQ0F=0;AF1=0.5;AC1=1;DP4=5,7,4,0;MQ=53;FQ=36.0162;PV4=0.0884615,1,0.00298596,1 GT:PL 0/1:63,0,248
Scaffold_1 183654 . G A 25.0205 PASS DP=18;VDB=0.211317;SGB=-0.556411;RPB=0.99361;MQB=0.0336741;MQSB=0.232624;BQB=0.697274;MQ0F=0;AF1=0.499999;AC1=1;DP4=6,7,4,0;MQ=53;FQ=28.0219;PV4=0.102941,1,0.000324702,1 GT:PL 0/1:55,0,255
Scaffold_1 183655 . A G 12.272 PASS DP=18;VDB=0.206307;SGB=-0.511536;RPB=0.917626;MQB=0.148002;MQSB=0.206192;BQB=0.673857;MQ0F=0;AF1=0.499984;AC1=1;DP4=7,8,3,0;MQ=53;FQ=15.1496;PV4=0.215686,1,0.028018,1 GT:PL 0/1:42,0,255
Scaffold_1 183657 . G A 12.272 PASS DP=19;VDB=0.192436;SGB=-0.511536;RPB=0.820031;MQB=0.167677;MQSB=0.232624;BQB=0.382771;MQ0F=0;AF1=0.499984;AC1=1;DP4=7,7,3,0;MQ=53;FQ=15.1496;PV4=0.227941,1,0.0350481,1 GT:PL 0/1:42,0,242
Scaffold_1 183660 . G A 24.0241 PASS DP=20;VDB=0.0949329;SGB=-0.556411;RPB=0.995012;MQB=0.0340475;MQSB=0.334958;BQB=0.278037;MQ0F=0;AF1=0.499999;AC1=1;DP4=8,7,4,0;MQ=54;FQ=27.0236;PV4=0.245098,1,0.000809238,1 GT:PL 0/1:54,0,255
Scaffold_1 183706 . C T 27.0155 PASS DP=18;VDB=0.0516381;SGB=-0.556411;RPB=0.601139;MQB=0.0120216;MQSB=0.364027;BQB=1;MQ0F=0;AF1=0.499999;AC1=1;DP4=6,8,4,0;MQ=55;FQ=30.0194;PV4=0.0915033,1,7.52903e-10,0.430773 GT:PL 0/1:57,0,255
Scaffold_1 183709 . A T 15.1417 PASS DP=18;VDB=0.131948;SGB=-0.511536;RPB=0.786565;MQB=0.0764263;MQSB=0.30569;BQB=0.751477;MQ0F=0;AF1=0.499992;AC1=1;DP4=6,8,3,0;MQ=55;FQ=18.0829;PV4=0.205882,1,0.00180087,0.293875 GT:PL 0/1:45,0,255
Scaffold_1 183786 . T C 23.0285 PASS DP=8;VDB=0.02;SGB=-0.453602;RPB=0;MQB=0;MQSB=1;BQB=0.6;MQ0F=0;AF1=0.499999;AC1=1;DP4=1,4,0,2;MQ=55;FQ=26.0258;PV4=1,1,0,0.00312765 GT:PL 0/1:53,0,140
Scaffold_1 183787 . A G 18.0749 PASS DP=8;VDB=0.02;SGB=-0.453602;RPB=0;MQB=0;MQSB=0.666667;BQB=1;MQ0F=0;AF1=0.499996;AC1=1;DP4=2,4,0,2;MQ=56;FQ=21.0492;PV4=1,1,0,0.00457208 GT:PL 0/1:48,0,164
Scaffold_1 183793 . A G 21.0411 PASS DP=8;VDB=0.02;SGB=-0.453602;RPB=0;MQB=0;MQSB=1;BQB=0.7;MQ0F=0;AF1=0.499998;AC1=1;DP4=1,4,0,2;MQ=55;FQ=24.0321;PV4=1,0.256655,0,0.329219 GT:PL 0/1:51,0,146
Scaffold_1 183818 . T A 29.0123 PASS DP=10;VDB=0.166456;SGB=-0.511536;RPB=0.300267;MQB=0.450401;MQSB=1;BQB=0.900802;MQ0F=0;AF1=0.5;AC1=1;DP4=1,4,0,3;MQ=48;FQ=32.0178;PV4=1,0.160246,0.0830212,0.15226 GT:PL 0/1:59,0,135
Scaffold_1 183840 . C T 17.0924 PASS DP=15;VDB=0.0516381;SGB=-0.556411;RPB=0.97357;MQB=0.096972;MQSB=0.447727;BQB=1;MQ0F=0;AF1=0.499995;AC1=1;DP4=3,6,0,4;MQ=51;FQ=20.058;PV4=0.496504,0.365107,0.0114747,1 GT:PL 0/1:47,0,208
Scaffold_1 183842 . A G 26.0177 PASS DP=14;VDB=0.166456;SGB=-0.511536;RPB=0.839457;MQB=0.314383;MQSB=0.304076;BQB=0.748798;MQ0F=0;AF1=0.499999;AC1=1;DP4=4,6,0,3;MQ=51;FQ=29.0205;PV4=0.496504,1,0.0880185,1 GT:PL 0/1:56,0,216
Scaffold_1 183853 . T C 26.0177 PASS DP=14;VDB=0.166456;SGB=-0.511536;RPB=0.748798;MQB=0.314383;MQSB=0.447727;BQB=0.748798;MQ0F=0;AF1=0.499999;AC1=1;DP4=3,7,0,3;MQ=51;FQ=29.0205;PV4=0.527972,1,0.0880185,1 GT:PL 0/1:56,0,211
Scaffold_1 183860 . C T 18.0749 PASS DP=15;VDB=0.166456;SGB=-0.511536;RPB=0.643969;MQB=0.22313;MQSB=0.426445;BQB=0.643969;MQ0F=0;AF1=0.499996;AC1=1;DP4=4,8,0,3;MQ=52;FQ=21.0492;PV4=0.516484,1,0.0552147,1 GT:PL 0/1:48,0,228
Scaffold_1 183872 . T A 32.0097 PASS DP=15;VDB=0.166456;SGB=-0.511536;RPB=0.309786;MQB=0.472367;MQSB=0.309786;BQB=0.655816;MQ0F=0;AF1=0.5;AC1=1;DP4=3,5,0,3;MQ=49;FQ=35.0165;PV4=0.490909,1,0.142774,1 GT:PL 0/1:62,0,184
Scaffold_1 183877 . G A 23.0285 PASS DP=15;VDB=0.166456;SGB=-0.511536;RPB=0.230693;MQB=0.2628;MQSB=0.249352;BQB=0.374629;MQ0F=0;AF1=0.499999;AC1=1;DP4=5,6,0,3;MQ=51;FQ=26.0258;PV4=0.258242,1,0.0695914,1 GT:PL 0/1:53,0,224
Scaffold_1 183879 . T A 26.0177 PASS DP=15;VDB=0.166456;SGB=-0.511536;RPB=0.207008;MQB=0.314383;MQSB=0.304076;BQB=0.447727;MQ0F=0;AF1=0.499999;AC1=1;DP4=4,6,0,3;MQ=51;FQ=29.0205;PV4=0.496504,1,0.0880185,1 GT:PL 0/1:56,0,212
Scaffold_1 183917 . C T 13.2188 PASS DP=16;VDB=0.166456;SGB=-0.511536;RPB=0.130524;MQB=0.19218;MQSB=0.366897;BQB=0.99774;MQ0F=0;AF1=0.499987;AC1=1;DP4=5,8,0,3;MQ=53;FQ=16.1222;PV4=0.508929,1,0.0439361,0.0278806 GT:PL 0/1:43,0,251
Scaffold_1 196381 . G C 11.3381 PASS DP=11;VDB=0.06;SGB=-0.453602;RPB=0.222222;MQB=0.722222;MQSB=0.0297172;BQB=0.666667;MQ0F=0.272727;AF1=0.49998;AC1=1;DP4=3,6,2,0;MQ=44;FQ=14.1838;PV4=0.181818,1,1,1 GT:PL 0/1:41,0,139
Scaffold_1 197314 . A G 19.061 PASS DP=27;VDB=0.00660743;SGB=-0.680642;RPB=0.0379029;MQB=0.00601417;MQSB=0.669823;BQB=0.0816199;MQ0F=0.185185;AF1=0.499997;AC1=1;DP4=4,5,10,2;MQ=33;FQ=22.0421;PV4=0.158824,0.0114716,5.97315e-05,1 GT:PL 0/1:49,0,190
Scaffold_1 198350 . T C 18.075 PASS DP=43;VDB=0.864626;SGB=-0.676189;RPB=0.0392004;MQB=0.0156454;MQSB=0.999865;BQB=0.324336;MQ0F=0.604651;AF1=0.499998;AC1=1;DP4=3,27,5,6;MQ=16;FQ=19.3018;PV4=0.0218398,0.00742341,1,0.0836545 GT:PL 0/1:48,0,51
Scaffold_1 199603 . G T 141.008 PASS DP=39;VDB=0.0129513;SGB=-0.692067;RPB=0.318743;MQB=0.303608;MQSB=0.999864;BQB=0.878333;MQ0F=0.282051;AF1=0.500002;AC1=1;DP4=6,10,7,13;MQ=21;FQ=24.0321;PV4=1,0.220059,1,0.0786342 GT:PL 0/1:171,0,51
Scaffold_1 199617 . G T 23.0285 PASS DP=33;VDB=0.00160425;SGB=-0.670168;RPB=0.464233;MQB=0.909373;MQSB=0.843068;BQB=0.306875;MQ0F=0.242424;AF1=0.499999;AC1=1;DP4=4,15,7,3;MQ=21;FQ=26.0258;PV4=0.0169388,0.0433531,1,1 GT:PL 0/1:53,0,128
Scaffold_1 199746 . G A 76.9725 PASS DP=3;VDB=0.243476;SGB=-0.511536;MQSB=1;MQ0F=0;AF1=1;AC1=2;DP4=0,0,1,2;MQ=39;FQ=-35.9869 GT:PL 1/1:109,9,0
Scaffold_1 199785 . T A 68.1255 PASS DP=4;VDB=0.251321;SGB=-0.511536;RPB=1;MQB=1;MQSB=1;BQB=1;MQ0F=0.25;AF1=1;AC1=2;DP4=0,1,1,2;MQ=34;FQ=-31.9885;PV4=1,1,1,1 GT:PL 1/1:99,5,0
Scaffold_1 210811 . T C 32.0097 PASS DP=14;VDB=0.267404;SGB=-0.511536;RPB=0.920044;MQB=0.472367;MQSB=0.200967;BQB=0.655816;MQ0F=0;AF1=0.5;AC1=1;DP4=4,4,3,0;MQ=51;FQ=35.0165;PV4=0.236364,0.218161,0.110618,1 GT:PL 0/1:62,0,189
Scaffold_1 210848 . A G 11.3381 PASS DP=16;VDB=0.833544;SGB=-0.511536;RPB=0.879351;MQB=0.177538;MQSB=0.245404;BQB=0.107298;MQ0F=0;AF1=0.49998;AC1=1;DP4=3,7,3,0;MQ=49;FQ=14.1838;PV4=0.0699301,1,0.056006,1 GT:PL 0/1:41,0,197
Scaffold_1 210910 . A G 24.0241 PASS DP=18;VDB=0.203362;SGB=-0.616816;RPB=0.811936;MQB=0.035674;MQSB=0.99778;BQB=0.811936;MQ0F=0;AF1=0.499999;AC1=1;DP4=2,6,3,3;MQ=43;FQ=27.0236;PV4=0.58042,0.396478,0.000418007,1 GT:PL 0/1:54,0,220
Scaffold_1 210933 . T C 90.0077 PASS DP=19;VDB=0.490054;SGB=-0.662043;RPB=0.416716;MQB=0.00385331;MQSB=0.762523;BQB=0.892753;MQ0F=0;AF1=0.5;AC1=1;DP4=1,6,4,5;MQ=45;FQ=93.0158;PV4=0.307692,0.355206,2.1952e-05,0.103539 GT:PL 0/1:120,0,179
Scaffold_1 210978 . A T 58.0073 PASS DP=21;VDB=0.080746;SGB=-0.616816;RPB=0.245404;MQB=0.0511259;MQSB=0.31698;BQB=0.920266;MQ0F=0.190476;AF1=0.5;AC1=1;DP4=3,4,4,2;MQ=45;FQ=61.0154;PV4=0.592075,0.478565,0.00979576,1 GT:PL 0/1:88,0,183
Scaffold_1 211164 . A T 80.7891 PASS DP=8;VDB=0.226768;SGB=-0.590765;RPB=1;MQB=1;MQSB=0.28717;BQB=1;MQ0F=0.25;AF1=1;AC1=2;DP4=0,1,3,2;MQ=39;FQ=-36.9867;PV4=1,0.242451,1,1 GT:PL 1/1:113,10,0
Scaffold_1 211176 . C G 54.0072 PASS DP=23;VDB=0.226768;SGB=-0.590765;RPB=0.0657285;MQB=0.0657285;MQSB=0.367879;BQB=0.011109;MQ0F=0.217391;AF1=0.5;AC1=1;DP4=7,2,3,2;MQ=31;FQ=35.9818;PV4=0.58042,0.00010464,1,1 GT:PL 0/1:84,0,63
Scaffold_1 211253 . A C 14.1793 PASS DP=17;VDB=0.732182;SGB=-0.590765;RPB=0.428556;MQB=0.523791;MQSB=0.733186;BQB=0.0952347;MQ0F=0.470588;AF1=0.500387;AC1=1;DP4=5,0,2,3;MQ=22;FQ=3.48743;PV4=0.166667,0.00158493,1,0.117725 GT:PL 0/1:44,0,28
Scaffold_1 211400 . C G 23.0285 PASS DP=15;VDB=0.585652;SGB=-0.556411;RPB=0.442128;MQB=0.643095;MQSB=0.263597;BQB=0.361741;MQ0F=0.466667;AF1=0.500001;AC1=1;DP4=7,0,1,3;MQ=25;FQ=21.9185;PV4=0.0242424,0.0735994,1,1 GT:PL 0/1:53,0,51
Scaffold_1 211906 . C T 29.6491 PASS DP=9;VDB=0.327477;SGB=-0.511536;RPB=0.28717;MQB=0.28717;MQSB=1;BQB=0.574341;MQ0F=0.222222;AF1=0.593902;AC1=1;DP4=3,0,2,1;MQ=22;FQ=-22.0131;PV4=1,1,1,1 GT:PL 0/1:59,0,5
Scaffold_1 236805 . C T 15.1417 PASS DP=10;VDB=0.38;SGB=-0.453602;RPB=0.666667;MQB=1;MQSB=0.992367;BQB=1;MQ0F=0;AF1=0.499992;AC1=1;DP4=2,4,2,0;MQ=60;FQ=18.0829;PV4=0.428571,1,1,1 GT:PL 0/1:45,0,151
Scaffold_1 241451 . G A 14.176 PASS DP=18;VDB=0.535497;SGB=-0.556411;RPB=0.558035;MQB=0.0211283;MQSB=0.466776;BQB=0.466776;MQ0F=0;AF1=0.49999;AC1=1;DP4=5,4,4,0;MQ=53;FQ=17.1004;PV4=0.227972,1,0.000147302,0.180798 GT:PL 0/1:44,0,215
Scaffold_1 241498 . C T 10.42 PASS DP=14;VDB=0.199299;SGB=-0.511536;RPB=0.944459;MQB=0.0608101;MQSB=0.342519;BQB=0.748798;MQ0F=0;AF1=0.499975;AC1=1;DP4=5,5,3,0;MQ=53;FQ=13.2265;PV4=0.230769,1,0.00840167,1 GT:PL 0/1:40,0,234
Scaffold_1 252744 . C A 32.0097 PASS DP=17;VDB=0.0221621;SGB=-0.511536;RPB=0.430095;MQB=1;MQSB=1;BQB=0.687289;MQ0F=0;AF1=0.5;AC1=1;DP4=9,3,0,3;MQ=60;FQ=35.0165;PV4=0.043956,1,1,1 GT:PL 0/1:62,0,249
Scaffold_1 267154 . C A 25.0205 PASS DP=7;VDB=0.02;SGB=-0.453602;RPB=0;MQB=1;MQSB=1;BQB=0.4;MQ0F=0;AF1=0.499999;AC1=1;DP4=1,4,0,2;MQ=60;FQ=28.0219;PV4=1,1,1,1 GT:PL 0/1:55,0,125
Scaffold_1 277420 . A T 38.0077 PASS DP=14;VDB=0.0822145;SGB=-0.511536;RPB=0.239651;MQB=0.239651;MQSB=0.818182;BQB=0.597928;MQ0F=0;AF1=0.5;AC1=1;DP4=8,2,3,0;MQ=59;FQ=41.0155;PV4=1,1,0.000952221,0.391943 GT:PL 0/1:68,0,217
Scaffold_1 277422 . G A 35.0083 PASS DP=14;VDB=0.0900131;SGB=-0.511536;RPB=0.201286;MQB=0.230693;MQSB=0.896649;BQB=0.782349;MQ0F=0;AF1=0.5;AC1=1;DP4=8,3,3,0;MQ=59;FQ=38.0158;PV4=1,1,0.000535666,0.475454 GT:PL 0/1:65,0,236
Scaffold_1 277438 . G A 35.0083 PASS DP=15;VDB=0.0822145;SGB=-0.511536;RPB=0.416546;MQB=0.230693;MQSB=0.896649;BQB=0.505697;MQ0F=0;AF1=0.5;AC1=1;DP4=8,3,3,0;MQ=59;FQ=38.0158;PV4=1,1,0.000535666,1 GT:PL 0/1:65,0,225
Scaffold_1 277439 . G A 35.0083 PASS DP=15;VDB=0.0860477;SGB=-0.511536;RPB=0.416546;MQB=0.230693;MQSB=0.852144;BQB=0.646383;MQ0F=0;AF1=0.5;AC1=1;DP4=7,4,3,0;MQ=59;FQ=38.0158;PV4=0.505495,1,0.000535666,1 GT:PL 0/1:65,0,251
Scaffold_1 277444 . G A 32.0097 PASS DP=15;VDB=0.0822145;SGB=-0.511536;RPB=0.352866;MQB=0.22313;MQSB=0.872525;BQB=0.22313;MQ0F=0;AF1=0.5;AC1=1;DP4=8,4,3,0;MQ=59;FQ=35.0165;PV4=0.516484,1,0.000302058,1 GT:PL 0/1:62,0,243
Scaffold_1 277504 . G A 55.0072 PASS DP=17;VDB=0.740842;SGB=-0.556411;RPB=0.971017;MQB=0.0923331;MQSB=0.697005;BQB=0.479364;MQ0F=0;AF1=0.5;AC1=1;DP4=7,5,4,0;MQ=58;FQ=58.0154;PV4=0.244505,1,7.23445e-05,1 GT:PL 0/1:85,0,255
Scaffold_1 277513 . G A 61.0073 PASS DP=15;VDB=0.740842;SGB=-0.556411;RPB=0.466776;MQB=0.114218;MQSB=0.748798;BQB=1;MQ0F=0;AF1=0.5;AC1=1;DP4=6,3,4,0;MQ=58;FQ=64.0155;PV4=0.496504,1,0.000536196,0.349302 GT:PL 0/1:91,0,220
Scaffold_1 277627 . A G 59.0073 PASS DP=10;VDB=0.988834;SGB=-0.556411;RPB=0.783809;MQB=0.0559863;MQSB=0.727822;BQB=0.559863;MQ0F=0;AF1=0.5;AC1=1;DP4=3,3,1,3;MQ=53;FQ=62.0154;PV4=0.571429,0.0463045,3.08041e-08,0.0309428 GT:PL 0/1:89,0,176
Scaffold_1 277635 . A G 72.0074 PASS DP=10;VDB=0.984512;SGB=-0.556411;RPB=0.783809;MQB=0.0559863;MQSB=0.727822;BQB=0.559863;MQ0F=0;AF1=0.5;AC1=1;DP4=3,3,1,3;MQ=53;FQ=75.0156;PV4=0.571429,0.286413,3.08041e-08,0.122744 GT:PL 0/1:102,0,169
Scaffold_1 277644 . G A 64.0073 PASS DP=11;VDB=0.981859;SGB=-0.556411;RPB=0.89338;MQB=0.0812164;MQSB=0.487298;BQB=0.89338;MQ0F=0;AF1=0.5;AC1=1;DP4=3,2,1,3;MQ=53;FQ=67.012;PV4=0.52381,1,2.89461e-07,0.192349 GT:PL 0/1:94,0,125
Scaffold_1 277659 . T C 55.0072 PASS DP=10;VDB=0.765925;SGB=-0.556411;RPB=0.89338;MQB=0.0812164;MQSB=0.428571;BQB=0.649731;MQ0F=0;AF1=0.5;AC1=1;DP4=2,3,0,4;MQ=52;FQ=58.0154;PV4=0.444444,0.127286,0,0.427674 GT:PL 0/1:85,0,144
Scaffold_1 277706 . C G 32.0097 PASS DP=14;VDB=0.220755;SGB=-0.511536;RPB=0.460355;MQB=0.0368832;MQSB=0.606531;BQB=0.2628;MQ0F=0;AF1=0.5;AC1=1;DP4=5,6,0,3;MQ=56;FQ=35.0165;PV4=0.258242,1,0,1 GT:PL 0/1:62,0,215
Scaffold_1 277707 . G A 41.0074 PASS DP=14;VDB=0.206307;SGB=-0.511536;RPB=0.414697;MQB=0.0497871;MQSB=0.562708;BQB=0.655816;MQ0F=0;AF1=0.5;AC1=1;DP4=4,4,0,3;MQ=55;FQ=44.0154;PV4=0.236364,1,0,1 GT:PL 0/1:71,0,198
Scaffold_1 277733 . A G 24.0241 PASS DP=16;VDB=0.267404;SGB=-0.511536;RPB=0.149803;MQB=0.0342181;MQSB=0.477935;BQB=0.997399;MQ0F=0;AF1=0.499999;AC1=1;DP4=7,5,0,3;MQ=57;FQ=27.0236;PV4=0.2,0.440568,0,1 GT:PL 0/1:54,0,255
Scaffold_1 277738 . T C 29.0123 PASS DP=15;VDB=0.28399;SGB=-0.511536;RPB=0.0586635;MQB=0.0342181;MQSB=0.477935;BQB=0.687289;MQ0F=0;AF1=0.5;AC1=1;DP4=7,5,0,3;MQ=57;FQ=32.0178;PV4=0.2,1,0,1 GT:PL 0/1:59,0,255
Scaffold_1 278344 . T C 15.1417 PASS DP=12;VDB=0.251321;SGB=-0.511536;RPB=0.809011;MQB=0.115573;MQSB=0.462292;BQB=0.924584;MQ0F=0;AF1=0.499992;AC1=1;DP4=3,3,3,0;MQ=53;FQ=18.0829;PV4=0.464286,0.181235,0.000192377,1 GT:PL 0/1:45,0,165
Scaffold_1 278647 . A T 25.0205 PASS DP=10;VDB=0.431015;SGB=-0.511536;RPB=0.462292;MQB=0.115573;MQSB=0.0714286;BQB=0.577865;MQ0F=0;AF1=0.499999;AC1=1;DP4=0,6,2,1;MQ=50;FQ=28.0219;PV4=0.0833333,1,0.00374385,0.0852353 GT:PL 0/1:55,0,115
Scaffold_1 278673 . C T 10.42 PASS DP=12;VDB=0.1;SGB=-0.453602;RPB=0.222222;MQB=0.888889;MQSB=0.0401934;BQB=0.777778;MQ0F=0;AF1=0.499975;AC1=1;DP4=4,5,0,2;MQ=47;FQ=13.2265;PV4=0.490909,1,1,1 GT:PL 0/1:40,0,213
Scaffold_1 278677 . C T 14.176 PASS DP=13;VDB=0.72;SGB=-0.453602;RPB=1;MQB=0.6;MQSB=0.0389771;BQB=0.4;MQ0F=0;AF1=0.49999;AC1=1;DP4=4,6,1,1;MQ=47;FQ=17.1004;PV4=1,1,0.269806,1 GT:PL 0/1:44,0,203
Scaffold_1 278678 . C T 114.008 PASS DP=13;VDB=0.510937;SGB=-0.636426;RPB=0.331306;MQB=0.0194886;MQSB=0.0389771;BQB=0.13642;MQ0F=0;AF1=0.5;AC1=1;DP4=4,1,1,6;MQ=47;FQ=88.0103;PV4=0.0719697,0.0222786,1,0.424704 GT:PL 0/1:144,0,115
Scaffold_1 278692 . C T 59.0073 PASS DP=13;VDB=0.585652;SGB=-0.556411;RPB=0.793923;MQB=0.072179;MQSB=0.186356;BQB=0.94394;MQ0F=0;AF1=0.5;AC1=1;DP4=3,5,3,1;MQ=48;FQ=62.0154;PV4=0.545455,1,0.00385162,1 GT:PL 0/1:89,0,213
Scaffold_1 278739 . G A 40.0075 PASS DP=8;VDB=0.160409;SGB=-0.556411;RPB=0.992367;MQB=0.124046;MQSB=0.25;BQB=0.62023;MQ0F=0;AF1=0.5;AC1=1;DP4=2,2,4,0;MQ=46;FQ=43.0153;PV4=0.428571,0.28672,0.0125412,1 GT:PL 0/1:70,0,116
Scaffold_1 278818 . C A 27.0155 PASS DP=5;VDB=0.06;SGB=-0.453602;RPB=0.666667;MQB=0;MQSB=1;BQB=0.666667;MQ0F=0;AF1=0.499999;AC1=1;DP4=2,1,2,0;MQ=45;FQ=29.9977;PV4=1,1,1,0.399434 GT:PL 0/1:57,0,80
Scaffold_1 278852 . T C 38.0091 PASS DP=3;VDB=0.38;SGB=-0.453602;RPB=1;MQB=1;MQSB=1;BQB=1;MQ0F=0;AF1=0.500158;AC1=1;DP4=1,0,1,1;MQ=47;FQ=6.20369;PV4=1,0.333333,0.0134391,1 GT:PL 0/1:68,0,32
Scaffold_1 278999 . C T 47.0072 PASS DP=6;VDB=0.472095;SGB=-0.556411;RPB=0.25;MQB=0;BQB=0.75;MQ0F=0;AF1=0.500001;AC1=1;DP4=0,2,0,4;MQ=45;FQ=27.0019;PV4=1,0.26105,0.0229005,1 GT:PL 0/1:77,0,54
Scaffold_1 279037 . G T 19.0949 PASS DP=4;VDB=0.02;SGB=-0.453602;RPB=1;MQB=1;BQB=1;MQ0F=0;AF1=0.503991;AC1=1;DP4=0,1,0,2;MQ=47;FQ=-9.50515;PV4=1,1,0.0134391,1 GT:PL 0/1:49,0,18
Scaffold_1 279039 . A G 32.011 PASS DP=4;VDB=0.02;SGB=-0.453602;RPB=1;MQB=1;BQB=1;MQ0F=0;AF1=0.500158;AC1=1;DP4=0,1,0,2;MQ=47;FQ=6.20122;PV4=1,0.333333,0.0134391,1 GT:PL 0/1:62,0,32
Scaffold_1 279049 . C T 29.0123 PASS DP=4;VDB=0.02;SGB=-0.453602;RPB=1;MQB=0.25;BQB=1;MQ0F=0;AF1=0.5;AC1=1;DP4=0,2,0,2;MQ=46;FQ=29.4809;PV4=1,1,0.20218,1 GT:PL 0/1:59,0,60
Scaffold_1 279258 . C T 126.066 PASS DP=9;VDB=0.291224;SGB=-0.636426;MQ0F=0;AF1=1;AC1=2;DP4=0,0,7,0;MQ=57;FQ=-47.986 GT:PL 1/1:159,21,0
Scaffold_1 279626 . C T 97.0079 PASS DP=8;VDB=0.0980762;SGB=-0.590765;RPB=0.8;MQB=0;MQSB=1;BQB=0.5;MQ0F=0;AF1=0.500013;AC1=1;DP4=1,1,0,5;MQ=55;FQ=16.1222;PV4=0.285714,1,1,0.288066 GT:PL 0/1:127,0,43
Scaffold_1 279639 . G A 11.3381 PASS DP=9;VDB=0.58;SGB=-0.453602;RPB=0.857143;MQB=0.5;MQSB=1;BQB=0.857143;MQ0F=0;AF1=0.49998;AC1=1;DP4=0,7,1,1;MQ=50;FQ=14.1838;PV4=0.222222,1,0.247884,1 GT:PL 0/1:41,0,137
Scaffold_1 279738 . C T 26.9806 PASS DP=3;VDB=0.470313;SGB=-0.511536;MQ0F=0;AF1=1;AC1=2;DP4=0,0,0,3;MQ=24;FQ=-35.9869 GT:PL 1/1:59,9,0
Scaffold_1 281497 . A C 211.195 PASS DP=14;VDB=0.337343;SGB=-0.680642;RPB=1;MQB=1;MQSB=0.239651;BQB=1;MQ0F=0;AF1=1;AC1=2;DP4=1,0,2,10;MQ=57;FQ=-34.9872;PV4=0.230769,0.462818,1,0.337172 GT:PL 1/1:243,8,0
Scaffold_1 281514 . T A 222.639 PASS DP=15;VDB=0.502891;SGB=-0.683931;RPB=1;MQB=1;MQSB=0.105399;BQB=1;MQ0F=0;AF1=1;AC1=2;DP4=1,0,3,10;MQ=55;FQ=-37.9865;PV4=0.285714,1,1,0.350993 GT:PL 1/1:255,11,0
Scaffold_1 281539 . T G 222.042 PASS DP=17;VDB=0.847865;SGB=-0.686358;RPB=1;MQB=1;MQSB=0.0211283;BQB=1;MQ0F=0;AF1=1;AC1=2;DP4=1,0,6,8;MQ=50;FQ=-49.986;PV4=0.466667,1,1,0.285556 GT:PL 1/1:255,23,0
Scaffold_1 281550 . A T 222.639 PASS DP=16;VDB=0.716573;SGB=-0.683931;RPB=1;MQB=1;MQSB=0.035674;BQB=1;MQ0F=0;AF1=1;AC1=2;DP4=1,0,5,8;MQ=50;FQ=-37.9865;PV4=0.428571,1,1,0.181278 GT:PL 1/1:255,11,0
Scaffold_1 281845 . C T 15.1681 PASS DP=4;VDB=0.421281;SGB=-0.511536;RPB=1;MQB=1;BQB=1;MQ0F=0;AF1=0.503159;AC1=1;DP4=0,1,0,3;MQ=28;FQ=-8.63579;PV4=1,0.2878,0.365115,1 GT:PL 0/1:45,0,19
Scaffold_1 281919 . T G 21.0064 PASS DP=3;VDB=0.82085;SGB=-0.511536;MQ0F=0;AF1=1;AC1=2;DP4=0,0,0,3;MQ=23;FQ=-35.9869 GT:PL 1/1:53,9,0
Scaffold_1 282025 . A C 12.2769 PASS DP=3;VDB=0.6;SGB=-0.453602;RPB=1;MQB=1;BQB=1;MQ0F=0;AF1=1;AC1=2;DP4=0,1,0,2;MQ=22;FQ=-29.9904;PV4=1,1,1,1 GT:PL 1/1:42,3,0
Scaffold_1 282036 . T C 16.8548 PASS DP=2;VDB=0.56;SGB=-0.453602;MQ0F=0;AF1=1;AC1=2;DP4=0,0,0,2;MQ=26;FQ=-32.988 GT:PL 1/1:48,6,0
Scaffold_1 282806 . A G 67.2634 PASS DP=5;VDB=0.176043;SGB=-0.590765;MQ0F=0;AF1=1;AC1=2;DP4=0,0,5,0;MQ=39;FQ=-41.9862 GT:PL 1/1:100,15,0
Scaffold_1 282826 . T G 69.1326 PASS DP=6;VDB=0.164385;SGB=-0.616816;MQSB=1;MQ0F=0.166667;AF1=1;AC1=2;DP4=0,0,5,1;MQ=36;FQ=-44.9861 GT:PL 1/1:102,18,0
Scaffold_1 282827 . C T 49.2632 PASS DP=6;VDB=0.167399;SGB=-0.590765;MQSB=1;MQ0F=0.166667;AF1=1;AC1=2;DP4=0,0,4,1;MQ=31;FQ=-41.9862 GT:PL 1/1:82,15,0
Scaffold_1 282831 . G A 48.0124 PASS DP=6;VDB=0.26019;SGB=-0.556411;RPB=0.5;MQB=0.25;MQSB=1;BQB=0.5;MQ0F=0.166667;AF1=1;AC1=2;DP4=1,1,4,0;MQ=36;FQ=-29.9901;PV4=0.333333,0.183891,1,1 GT:PL 1/1:78,3,0
Scaffold_1 282862 . G A 28.134 PASS DP=7;VDB=0.450604;SGB=-0.511536;RPB=0.666667;MQB=0.333333;MQSB=1;BQB=0.333333;MQ0F=0.142857;AF1=1;AC1=2;DP4=1,1,3,0;MQ=31;FQ=-27.9926;PV4=0.4,0.125355,1,0.247513 GT:PL 1/1:57,1,0
Scaffold_1 285144 . C T 19.2495 PASS DP=5;VDB=0.756524;SGB=-0.511536;RPB=0;MQB=0;MQSB=0.666667;BQB=0.333333;MQ0F=0;AF1=0.730434;AC1=1;DP4=0,2,2,1;MQ=22;FQ=-24.9995;PV4=0.4,0.109551,1,0.109551 GT:PL 0/1:48,0,2
Scaffold_1 285562 . A G 69.0108 PASS DP=7;VDB=0.244943;SGB=-0.556411;RPB=0.405132;MQB=0.202566;BQB=1.01283;MQ0F=0.285714;AF1=0.500397;AC1=1;DP4=3,0,4,0;MQ=35;FQ=3.54723;PV4=1,1,1,0.032747 GT:PL 0/1:99,0,28
Scaffold_1 285609 . C T 80.0078 PASS DP=10;VDB=0.177551;SGB=-0.616816;RPB=0.727822;MQB=0.335918;BQB=1.00775;MQ0F=0.2;AF1=0.500025;AC1=1;DP4=4,0,6,0;MQ=31;FQ=13.2265;PV4=1,1,1,1 GT:PL 0/1:110,0,40
Scaffold_1 285707 . C T 125.008 PASS DP=24;VDB=0.344675;SGB=-0.651104;RPB=0.694935;MQB=0.085417;MQSB=0.802432;BQB=0.810414;MQ0F=0.166667;AF1=0.5;AC1=1;DP4=11,3,5,3;MQ=30;FQ=84.0155;PV4=0.624355,1,1,1 GT:PL 0/1:155,0,111
Scaffold_1 285708 . G A 79.0075 PASS DP=24;VDB=0.172156;SGB=-0.683931;RPB=0.377737;MQB=0.22142;MQSB=0.782628;BQB=0.910073;MQ0F=0.166667;AF1=0.5;AC1=1;DP4=7,3,10,3;MQ=29;FQ=82.0157;PV4=1,0.249017,0.0360862,0.29525 GT:PL 0/1:109,0,162
Scaffold_1 285712 . A T 117.008 PASS DP=26;VDB=0.342481;SGB=-0.651104;RPB=0.710548;MQB=0.0822519;MQSB=0.615982;BQB=0.94486;MQ0F=0.153846;AF1=0.5;AC1=1;DP4=12,4,5,3;MQ=30;FQ=103.908;PV4=0.646626,1,1,0.437766 GT:PL 0/1:147,0,131
Scaffold_1 285798 . C T 80.0075 PASS DP=29;VDB=0.205475;SGB=-0.670168;RPB=0.479639;MQB=0.987578;MQSB=0.856997;BQB=0.99446;MQ0F=0.172414;AF1=0.5;AC1=1;DP4=11,5,7,3;MQ=26;FQ=83.0156;PV4=1,1,1,1 GT:PL 0/1:110,0,155
Scaffold_1 285799 . G A 31.0104 PASS DP=29;VDB=0.0366952;SGB=-0.590765;RPB=0.241683;MQB=0.153804;MQSB=0.913725;BQB=0.976419;MQ0F=0.172414;AF1=0.5;AC1=1;DP4=16,6,3,2;MQ=27;FQ=34.0168;PV4=0.615905,0.265583,1,1 GT:PL 0/1:61,0,176
Scaffold_1 285885 . T G 12.272 PASS DP=15;VDB=0.0194361;SGB=-0.616816;RPB=0.811936;MQB=0.991701;MQSB=0.997503;BQB=0.967216;MQ0F=0.0666667;AF1=0.499984;AC1=1;DP4=6,2,4,2;MQ=26;FQ=15.1496;PV4=1,0.378141,1,1 GT:PL 0/1:42,0,96
Scaffold_1 286087 . C G 22.0341 PASS DP=34;VDB=0.0046443;SGB=-0.662043;RPB=0.0172376;MQB=0.316986;MQSB=0.655816;BQB=0.778642;MQ0F=0.0882353;AF1=0.499998;AC1=1;DP4=11,13,5,4;MQ=27;FQ=25.0286;PV4=0.707985,1,0.0841748,1 GT:PL 0/1:52,0,224
Scaffold_1 286154 . G A 213.021 PASS DP=23;VDB=0.16353;SGB=-0.692067;RPB=1;MQB=1;MQSB=0.926456;BQB=1;MQ0F=0.0434783;AF1=1;AC1=2;DP4=1,0,11,9;MQ=30;FQ=-52.986;PV4=1,1,0.251435,0.388371 GT:PL 1/1:246,26,0
Scaffold_1 286155 . C T 187.014 PASS DP=24;VDB=0.296653;SGB=-0.69168;RPB=0.718447;MQB=0.79911;MQSB=0.834768;BQB=0.995434;MQ0F=0.0416667;AF1=1;AC1=2;DP4=3,0,10,9;MQ=30;FQ=-29.9901;PV4=0.24026,0.323125,1,0.301385 GT:PL 1/1:217,3,0
Scaffold_1 286163 . A C 199.026 PASS DP=25;VDB=0.558735;SGB=-0.692717;RPB=0.608696;MQB=0.804348;MQSB=0.691;BQB=0.73913;MQ0F=0.04;AF1=1;AC1=2;DP4=2,0,13,10;MQ=29;FQ=-51.986;PV4=0.5,1,0.347888,0.246098 GT:PL 1/1:232,25,0
Scaffold_1 286427 . C T 38.0077 PASS DP=21;VDB=0.111502;SGB=-0.616816;RPB=0.984733;MQB=0.307929;MQSB=0.135335;BQB=1;MQ0F=0.142857;AF1=0.5;AC1=1;DP4=3,10,1,5;MQ=22;FQ=40.8031;PV4=1,1,1,1 GT:PL 0/1:68,0,81
Scaffold_1 286471 . A T 14.176 PASS DP=11;VDB=0.1;SGB=-0.453602;RPB=0.375;MQB=0.125;MQSB=0.458241;BQB=0.375;MQ0F=0.363636;AF1=0.49999;AC1=1;DP4=3,5,0,2;MQ=26;FQ=17.0936;PV4=1,1,1,1 GT:PL 0/1:44,0,72
Scaffold_1 286529 . C T 24.0262 PASS DP=7;VDB=0.21346;SGB=-0.511536;RPB=0.861511;MQB=0.861511;BQB=0.861511;MQ0F=0.285714;AF1=0.500249;AC1=1;DP4=0,3,0,3;MQ=26;FQ=4.76267;PV4=1,1,1,1 GT:PL 0/1:54,0,30
Scaffold_1 286541 . C T 17.0925 PASS DP=7;VDB=0.138245;SGB=-0.556411;RPB=0.810265;MQB=0.810265;MQSB=1;BQB=0.405132;MQ0F=0.285714;AF1=0.500003;AC1=1;DP4=1,2,0,4;MQ=25;FQ=16.0009;PV4=0.428571,1,0.368127,0.218294 GT:PL 0/1:47,0,45
Scaffold_1 287200 . G T 20.0499 PASS DP=8;VDB=0.02;SGB=-0.453602;RPB=1;MQB=0.5;BQB=0.875;MQ0F=0;AF1=0.499997;AC1=1;DP4=0,4,0,2;MQ=55;FQ=23.0365;PV4=1,1,1,1 GT:PL 0/1:50,0,96
Scaffold_1 287218 . T C 78.5133 PASS DP=8;VDB=0.126977;SGB=-0.616816;RPB=1;MQB=1;MQSB=1;BQB=1;MQ0F=0;AF1=1;AC1=2;DP4=1,0,0,6;MQ=43;FQ=-38.9864;PV4=0.142857,0.30478,1,1 GT:PL 1/1:111,12,0
Scaffold_1 287227 . T C 93.2637 PASS DP=8;VDB=0.0602416;SGB=-0.636426;RPB=1;MQB=1;MQSB=1;BQB=1;MQ0F=0;AF1=1;AC1=2;DP4=1,0,0,7;MQ=42;FQ=-41.9862;PV4=0.125,0.212285,1,1 GT:PL 1/1:126,15,0
Scaffold_1 287438 . G A 27.0206 PASS DP=3;VDB=0.88;SGB=-0.453602;RPB=1;MQB=1;MQSB=1;BQB=1;MQ0F=0;AF1=1;AC1=2;DP4=0,1,2,0;MQ=28;FQ=-29.9901;PV4=0.333333,0.333333,1,0.333333 GT:PL 1/1:57,3,0
Scaffold_1 287486 . A C 88.1931 PASS DP=6;VDB=0.0277111;SGB=-0.556411;RPB=1;MQB=1;MQSB=1;BQB=1;MQ0F=0;AF1=1;AC1=2;DP4=0,1,4,0;MQ=53;FQ=-34.9872;PV4=0.2,1,1,0.342519 GT:PL 1/1:120,8,0
Scaffold_1 287488 . C T 80.0119 PASS DP=6;VDB=0.0277111;SGB=-0.556411;RPB=0;MQB=0;MQSB=1;BQB=1;MQ0F=0;AF1=0.500499;AC1=1;DP4=1,1,4,0;MQ=51;FQ=3.01767;PV4=0.333333,1,1,1 GT:PL 0/1:110,0,27
Scaffold_1 287492 . A C 80.0119 PASS DP=6;VDB=0.0277111;SGB=-0.556411;RPB=0;MQB=0;MQSB=1;BQB=0.5;MQ0F=0;AF1=0.500499;AC1=1;DP4=1,1,4,0;MQ=51;FQ=3.01767;PV4=0.333333,1,1,1 GT:PL 0/1:110,0,27
Scaffold_1 287639 . A T 48.521 PASS DP=17;VDB=0.0532881;SGB=-0.511536;RPB=1;MQB=1;BQB=1;MQ0F=0.0588235;AF1=0.571816;AC1=1;DP4=1,0,3,0;MQ=43;FQ=-21.0201;PV4=1,1,0.0703951,1 GT:PL 0/1:78,0,6
Scaffold_1 287641 . T G 33.0091 PASS DP=17;VDB=0.0516381;SGB=-0.556411;RPB=0.624635;MQB=0.410777;MQSB=0.639741;BQB=0.935966;MQ0F=0.0588235;AF1=0.5;AC1=1;DP4=5,7,3,1;MQ=44;FQ=36.0162;PV4=0.569231,0.480468,0.206833,1 GT:PL 0/1:63,0,210
Scaffold_1 287642 . G A 18.0749 PASS DP=17;VDB=0.0532881;SGB=-0.511536;RPB=0.989637;MQB=0.687289;MQSB=0.616426;BQB=0.997399;MQ0F=0.0588235;AF1=0.499996;AC1=1;DP4=4,8,3,0;MQ=44;FQ=21.0492;PV4=0.0769231,0.486842,0.318586,1 GT:PL 0/1:48,0,247
Scaffold_1 287644 . A T 18.0749 PASS DP=17;VDB=0.0588947;SGB=-0.511536;RPB=0.989637;MQB=0.77073;MQSB=0.785785;BQB=0.809825;MQ0F=0.0588235;AF1=0.499996;AC1=1;DP4=4,8,3,0;MQ=42;FQ=21.0492;PV4=0.0769231,1,0.359248,1 GT:PL 0/1:48,0,228
Scaffold_1 287645 . T G 15.1417 PASS DP=17;VDB=0.0532881;SGB=-0.511536;RPB=0.945009;MQB=0.682254;MQSB=0.639741;BQB=0.721955;MQ0F=0.0588235;AF1=0.499992;AC1=1;DP4=5,8,3,0;MQ=44;FQ=18.0829;PV4=0.2,1,0.31265,1 GT:PL 0/1:45,0,249
Scaffold_1 287646 . G A 15.1417 PASS DP=17;VDB=0.0588947;SGB=-0.511536;RPB=0.945009;MQB=0.682254;MQSB=0.639741;BQB=0.368713;MQ0F=0.0588235;AF1=0.499992;AC1=1;DP4=5,8,3,0;MQ=44;FQ=18.0829;PV4=0.2,1,0.31265,1 GT:PL 0/1:45,0,231
Scaffold_1 287647 . A C 18.0749 PASS DP=17;VDB=0.0588947;SGB=-0.511536;RPB=0.989637;MQB=0.687289;MQSB=0.616426;BQB=0.317132;MQ0F=0.0588235;AF1=0.499996;AC1=1;DP4=4,8,3,0;MQ=44;FQ=21.0492;PV4=0.0769231,1,0.318586,1 GT:PL 0/1:48,0,225
Scaffold_1 287649 . C T 15.1417 PASS DP=17;VDB=0.0588947;SGB=-0.511536;RPB=0.945009;MQB=0.682254;MQSB=0.639741;BQB=0.832553;MQ0F=0.0588235;AF1=0.499992;AC1=1;DP4=5,8,3,0;MQ=44;FQ=18.0829;PV4=0.2,1,0.31265,1 GT:PL 0/1:45,0,242
Scaffold_1 287652 . T G 18.0749 PASS DP=16;VDB=0.0588947;SGB=-0.511536;RPB=0.989637;MQB=0.77073;MQSB=0.412466;BQB=0.687289;MQ0F=0.0625;AF1=0.499996;AC1=1;DP4=5,7,3,0;MQ=42;FQ=21.0492;PV4=0.2,1,0.359248,1 GT:PL 0/1:48,0,208
Scaffold_1 287653 . G C 21.0411 PASS DP=16;VDB=0.0588947;SGB=-0.511536;RPB=0.996974;MQB=0.862013;MQSB=0.571605;BQB=0.896649;MQ0F=0.0625;AF1=0.499998;AC1=1;DP4=4,7,3,0;MQ=41;FQ=24.0321;PV4=0.192308,1,0.415833,1 GT:PL 0/1:51,0,221
Scaffold_1 287654 . C A 21.0411 PASS DP=16;VDB=0.0560361;SGB=-0.511536;RPB=0.996974;MQB=0.862013;MQSB=0.571605;BQB=0.174566;MQ0F=0.0625;AF1=0.499998;AC1=1;DP4=4,7,3,0;MQ=41;FQ=24.0321;PV4=0.192308,1,0.415833,1 GT:PL 0/1:51,0,201
Scaffold_1 287655 . A C 21.0411 PASS DP=16;VDB=0.0588947;SGB=-0.511536;RPB=0.996974;MQB=0.862013;MQSB=0.571605;BQB=0.782349;MQ0F=0.0625;AF1=0.499998;AC1=1;DP4=4,7,3,0;MQ=41;FQ=24.0321;PV4=0.192308,1,0.415833,1 GT:PL 0/1:51,0,217
Scaffold_1 287656 . C T 18.0749 PASS DP=16;VDB=0.0588947;SGB=-0.511536;RPB=0.989637;MQB=0.77073;MQSB=0.412466;BQB=0.93697;MQ0F=0.0625;AF1=0.499996;AC1=1;DP4=5,7,3,0;MQ=42;FQ=21.0492;PV4=0.2,1,0.359248,1 GT:PL 0/1:48,0,222
Scaffold_1 287657 . T G 24.0241 PASS DP=16;VDB=0.0560361;SGB=-0.511536;RPB=0.944459;MQB=0.944459;MQSB=0.777113;BQB=0.314383;MQ0F=0.0625;AF1=0.499999;AC1=1;DP4=3,7,3,0;MQ=39;FQ=27.0236;PV4=0.0699301,1,0.486183,1 GT:PL 0/1:54,0,169
Scaffold_1 287658 . G C 21.0411 PASS DP=15;VDB=0.0588947;SGB=-0.511536;RPB=0.996974;MQB=0.862013;MQSB=0.195278;BQB=0.896649;MQ0F=0.0666667;AF1=0.499998;AC1=1;DP4=5,6,3,0;MQ=41;FQ=24.0321;PV4=0.208791,1,0.415833,1 GT:PL 0/1:51,0,189
Scaffold_1 287659 . C A 21.0411 PASS DP=15;VDB=0.0588947;SGB=-0.511536;RPB=0.996974;MQB=0.862013;MQSB=0.195278;BQB=0.896649;MQ0F=0.0666667;AF1=0.499998;AC1=1;DP4=5,6,3,0;MQ=41;FQ=24.0321;PV4=0.208791,1,0.415833,1 GT:PL 0/1:51,0,216
Scaffold_1 287661 . A G 24.0241 PASS DP=15;VDB=0.0618664;SGB=-0.511536;RPB=0.699673;MQB=0.879351;MQSB=0.245404;BQB=0.207008;MQ0F=0.0666667;AF1=0.499999;AC1=1;DP4=4,6,3,0;MQ=41;FQ=27.0236;PV4=0.192308,1,0.430543,1 GT:PL 0/1:54,0,175
Scaffold_1 287662 . G T 21.0411 PASS DP=15;VDB=0.0588947;SGB=-0.511536;RPB=0.862013;MQB=0.862013;MQSB=0.195278;BQB=0.374629;MQ0F=0.0666667;AF1=0.499998;AC1=1;DP4=5,6,3,0;MQ=41;FQ=24.0321;PV4=0.208791,1,0.418213,1 GT:PL 0/1:51,0,182
Scaffold_1 287663 . T C 27.0155 PASS DP=15;VDB=0.0560361;SGB=-0.511536;RPB=0.485672;MQB=0.962269;MQSB=0.372712;BQB=0.25042;MQ0F=0.0666667;AF1=0.499999;AC1=1;DP4=3,6,3,0;MQ=39;FQ=30.0194;PV4=0.181818,1,1,1 GT:PL 0/1:57,0,155
Scaffold_1 287666 . C A 20.0499 PASS DP=16;VDB=0.0483573;SGB=-0.556411;RPB=0.966484;MQB=0.501405;MQSB=0.134399;BQB=0.77274;MQ0F=0.0625;AF1=0.499997;AC1=1;DP4=6,5,3,1;MQ=42;FQ=23.0366;PV4=0.604396,1,0.255971,1 GT:PL 0/1:50,0,205
Scaffold_1 287669 . A T 18.0749 PASS DP=16;VDB=0.0560361;SGB=-0.511536;RPB=0.513417;MQB=0.77073;MQSB=0.134399;BQB=0.91051;MQ0F=0.0625;AF1=0.499996;AC1=1;DP4=6,6,3,0;MQ=42;FQ=21.0492;PV4=0.228571,1,0.363029,1 GT:PL 0/1:48,0,210
Scaffold_1 287673 . T C 18.0749 PASS DP=15;VDB=0.45314;SGB=-0.556411;RPB=0.872525;MQB=0.991513;MQSB=0.322486;BQB=0.926163;MQ0F=0.0666667;AF1=0.499996;AC1=1;DP4=4,7,4,0;MQ=41;FQ=21.0492;PV4=0.0769231,1,1,0.293822 GT:PL 0/1:48,0,190
Scaffold_1 287674 . C T 57.0073 PASS DP=15;VDB=0.0298006;SGB=-0.556411;RPB=0.293091;MQB=0.808101;MQSB=0.322486;BQB=0.872525;MQ0F=0.0666667;AF1=0.5;AC1=1;DP4=5,6,3,1;MQ=41;FQ=60.0154;PV4=0.569231,1,0.433916,1 GT:PL 0/1:87,0,197
Scaffold_1 287698 . T C 201.009 PASS DP=17;VDB=0.367738;SGB=-0.676189;RPB=0.823561;MQB=0.338073;MQSB=0.217575;BQB=0.924401;MQ0F=0.0588235;AF1=0.5;AC1=1;DP4=1,4,8,3;MQ=42;FQ=58.0154;PV4=0.105769,0.0772294,1,0.259535 GT:PL 0/1:231,0,85
Scaffold_1 287704 . G T 164.009 PASS DP=17;VDB=0.288493;SGB=-0.662043;RPB=0.764228;MQB=0.308647;MQSB=0.194346;BQB=0.154295;MQ0F=0.0588235;AF1=0.5;AC1=1;DP4=1,4,6,3;MQ=42;FQ=56.0154;PV4=0.265734,0.017748,1,0.169625 GT:PL 0/1:194,0,83
Scaffold_1 287771 . C G 150.009 PASS DP=12;VDB=0.796534;SGB=-0.651104;RPB=0.75;MQB=0.625;MQSB=0.503877;BQB=0.25;MQ0F=0.0833333;AF1=0.50005;AC1=1;DP4=1,1,3,5;MQ=54;FQ=10.4274;PV4=1,0.0132423,1,0.447836 GT:PL 0/1:180,0,37
Scaffold_1 287795 . A C 129.008 PASS DP=9;VDB=0.641691;SGB=-0.616816;RPB=1;MQB=1;MQSB=1.01283;BQB=1;MQ0F=0;AF1=0.500031;AC1=1;DP4=1,0,3,3;MQ=60;FQ=12.2797;PV4=1,0.00241545,0.288066,1 GT:PL 0/1:159,0,39
Scaffold_1 288142 . G A 15.8779 PASS DP=3;VDB=0.02;SGB=-0.453602;MQ0F=0;AF1=1;AC1=2;DP4=0,0,2,0;MQ=51;FQ=-32.988 GT:PL 1/1:47,6,0
Scaffold_1 289048 . G A 44.0073 PASS DP=17;VDB=0.839591;SGB=-0.590765;RPB=0.998397;MQB=0.00780539;MQSB=0.601066;BQB=0.851779;MQ0F=0;AF1=0.5;AC1=1;DP4=8,3,5,0;MQ=53;FQ=47.0153;PV4=0.508929,1,5.29087e-06,0.360671 GT:PL 0/1:74,0,242
Scaffold_1 289069 . C T 44.0073 PASS DP=16;VDB=0.834014;SGB=-0.590765;RPB=0.663189;MQB=0.0212399;MQSB=0.48045;BQB=0.985665;MQ0F=0;AF1=0.5;AC1=1;DP4=8,3,5,0;MQ=51;FQ=47.0153;PV4=0.508929,1,0.000211761,0.084937 GT:PL 0/1:74,0,241
Scaffold_1 289096 . A G 12.272 PASS DP=15;VDB=0.724364;SGB=-0.511536;RPB=0.400803;MQB=0.275467;MQSB=0.748798;BQB=0.447727;MQ0F=0;AF1=0.499984;AC1=1;DP4=7,3,3,0;MQ=56;FQ=15.1496;PV4=0.527972,0.4685,0.00405044,0.434355 GT:PL 0/1:42,0,244
Scaffold_1 289188 . A G 101.008 PASS DP=16;VDB=0.659036;SGB=-0.636426;RPB=0.985046;MQB=0.993326;MQSB=0.992528;BQB=0.651439;MQ0F=0;AF1=0.5;AC1=1;DP4=3,5,7,0;MQ=56;FQ=104.016;PV4=0.025641,0.198828,0.420922,0.364418 GT:PL 0/1:131,0,198
Scaffold_1 289207 . C T 88.0076 PASS DP=16;VDB=0.387746;SGB=-0.616816;RPB=0.930476;MQB=0.887703;MQSB=0.914264;BQB=1;MQ0F=0;AF1=0.5;AC1=1;DP4=3,7,6,0;MQ=57;FQ=91.0158;PV4=0.0113636,1,1,1 GT:PL 0/1:118,0,215
Scaffold_1 289229 . C T 149.008 PASS DP=17;VDB=0.101802;SGB=-0.636426;RPB=0.816632;MQB=0.941512;MQSB=0.711573;BQB=0.511891;MQ0F=0;AF1=0.5;AC1=1;DP4=7,1,2,5;MQ=57;FQ=147.892;PV4=0.0405594,0.463165,1,1 GT:PL 0/1:179,0,177
Scaffold_1 289254 . G A 203.009 PASS DP=19;VDB=0.602433;SGB=-0.670168;RPB=0.999167;MQB=0.448955;MQSB=0.637085;BQB=0.171472;MQ0F=0;AF1=0.5;AC1=1;DP4=5,4,3,7;MQ=57;FQ=168.016;PV4=0.36985,1,1,0.171963 GT:PL 0/1:233,0,195
Scaffold_1 289264 . C T 119.008 PASS DP=20;VDB=0.31234;SGB=-0.651104;RPB=0.918304;MQB=0.562066;MQSB=0.41781;BQB=0.41781;MQ0F=0;AF1=0.5;AC1=1;DP4=4,7,4,4;MQ=57;FQ=122.016;PV4=0.657696,0.172769,0.0841867,1 GT:PL 0/1:149,0,220
Scaffold_1 289282 . C G 147.008 PASS DP=20;VDB=0.322974;SGB=-0.651104;RPB=0.674623;MQB=0.381255;MQSB=0.525788;BQB=0.252652;MQ0F=0;AF1=0.5;AC1=1;DP4=6,6,4,4;MQ=58;FQ=150.017;PV4=1,0.0394385,0.0145434,1 GT:PL 0/1:177,0,255
Scaffold_1 289295 . T G 122.008 PASS DP=20;VDB=0.0794599;SGB=-0.616816;RPB=0.961295;MQB=0.24146;MQSB=0.566419;BQB=0.961295;MQ0F=0;AF1=0.5;AC1=1;DP4=6,6,2,4;MQ=58;FQ=125.016;PV4=0.638009,1,0.00429918,1 GT:PL 0/1:152,0,255
Scaffold_1 289323 . G T 51.0072 PASS DP=18;VDB=0.0395055;SGB=-0.556411;RPB=0.410777;MQB=0.346864;MQSB=0.635221;BQB=0.983592;MQ0F=0;AF1=0.5;AC1=1;DP4=8,4,1,3;MQ=58;FQ=54.0154;PV4=0.261538,0.144665,0.00302904,1 GT:PL 0/1:81,0,255
Scaffold_1 289657 . C T 225.009 PASS DP=19;VDB=0.200809;SGB=-0.686358;RPB=0.728186;MQB=1;MQSB=1;BQB=0.816272;MQ0F=0;AF1=0.5;AC1=1;DP4=1,3,7,7;MQ=60;FQ=67.0155;PV4=0.588235,0.202491,1,1 GT:PL 0/1:255,0,94
Scaffold_1 289954 . A G 86.0076 PASS DP=17;VDB=0.761128;SGB=-0.590765;RPB=0.878142;MQB=0.460027;MQSB=0.987474;BQB=0.427987;MQ0F=0;AF1=0.5;AC1=1;DP4=4,7,3,2;MQ=58;FQ=89.0158;PV4=0.596154,0.0741119,0.0121933,0.418029 GT:PL 0/1:116,0,255
Scaffold_1 290031 . T C 77.0075 PASS DP=11;VDB=0.585652;SGB=-0.556411;RPB=0.895781;MQB=0.0559863;MQSB=0.824834;BQB=1.00775;MQ0F=0;AF1=0.5;AC1=1;DP4=4,2,3,1;MQ=54;FQ=80.0156;PV4=1,1,1.01647e-06,1 GT:PL 0/1:107,0,163
Scaffold_1 290273 . A G 73.0074 PASS DP=13;VDB=0.872827;SGB=-0.590765;RPB=0.838008;MQB=0.331306;MQSB=0.707404;BQB=0.6821;MQ0F=0;AF1=0.5;AC1=1;DP4=2,5,1,4;MQ=53;FQ=76.0156;PV4=1,0.190654,0.0400206,1 GT:PL 0/1:103,0,167
Scaffold_1 299229 . G A 43.0073 PASS DP=19;VDB=0.0751808;SGB=-0.556411;RPB=0.0336741;MQB=0.087379;MQSB=0.541994;BQB=0.823732;MQ0F=0;AF1=0.5;AC1=1;DP4=11,2,1,3;MQ=56;FQ=46.0153;PV4=0.052521,0.478264,2.18298e-05,0.000293772 GT:PL 0/1:73,0,246
Scaffold_1 308087 . G A 50.7647 PASS DP=3;VDB=0.94;SGB=-0.453602;MQSB=1;MQ0F=0;AF1=1;AC1=2;DP4=0,0,1,1;MQ=60;FQ=-32.988 GT:PL 1/1:82,6,0
Scaffold_1 308800 . G A 46.7647 PASS DP=4;VDB=0.28;SGB=-0.453602;MQSB=1;MQ0F=0;AF1=1;AC1=2;DP4=0,0,1,1;MQ=60;FQ=-32.988 GT:PL 1/1:78,6,0
Scaffold_1 318976 . C A 13.2188 PASS DP=7;VDB=0.02;SGB=-0.453602;RPB=0.8;MQB=1;MQSB=1.01283;BQB=0.2;MQ0F=0;AF1=0.499987;AC1=1;DP4=2,3,2,0;MQ=60;FQ=16.1222;PV4=0.428571,0.0337751,1,1 GT:PL 0/1:43,0,152
Scaffold_1 340722 . C A 19.061 PASS DP=10;VDB=0.02;SGB=-0.453602;RPB=0.285714;MQB=1;MQSB=0.974597;BQB=0.857143;MQ0F=0;AF1=0.499997;AC1=1;DP4=4,3,0,2;MQ=60;FQ=22.0421;PV4=0.444444,0.356904,1,1 GT:PL 0/1:49,0,217
Scaffold_1 349260 . G A 137.133 PASS DP=8;VDB=0.377852;SGB=-0.616816;MQSB=0.861511;MQ0F=0;AF1=1;AC1=2;DP4=0,0,3,3;MQ=60;FQ=-44.9861 GT:PL 1/1:170,18,0
Scaffold_1 349753 . C A 18.0749 PASS DP=13;VDB=0.152777;SGB=-0.556411;RPB=0.125315;MQB=0.0312685;MQSB=0.382304;BQB=1;MQ0F=0;AF1=0.499996;AC1=1;DP4=5,3,4,0;MQ=51;FQ=21.0492;PV4=0.490909,1,0.000137026,0.0831415 GT:PL 0/1:48,0,205
Scaffold_1 349768 . C T 12.272 PASS DP=13;VDB=0.100421;SGB=-0.556411;RPB=0.096972;MQB=0.0260997;MQSB=0.447727;BQB=0.785785;MQ0F=0;AF1=0.499984;AC1=1;DP4=6,3,4,0;MQ=51;FQ=15.1496;PV4=0.496504,0.282081,5.40066e-05,1 GT:PL 0/1:42,0,215
Scaffold_1 349770 . A G 49.0072 PASS DP=11;VDB=0.0643982;SGB=-0.590765;RPB=0.297172;MQB=0.0297172;MQSB=1;BQB=0.742931;MQ0F=0;AF1=0.5;AC1=1;DP4=5,1,5,0;MQ=50;FQ=52.0153;PV4=1,0.092621,0.000989062,0.289491 GT:PL 0/1:79,0,156
Scaffold_1 350013 . T G 35.0083 PASS DP=12;VDB=0.0649539;SGB=-0.511536;RPB=0.916482;MQB=0.274945;MQSB=0.75;BQB=0.824834;MQ0F=0;AF1=0.5;AC1=1;DP4=2,5,0,3;MQ=51;FQ=38.0158;PV4=1,1,0.0188707,1 GT:PL 0/1:65,0,164
Scaffold_1 350053 . T A 12.272 PASS DP=14;VDB=0.865924;SGB=-0.556411;RPB=0.898397;MQB=0.180092;MQSB=0.909091;BQB=0.381255;MQ0F=0;AF1=0.499984;AC1=1;DP4=2,7,0,4;MQ=45;FQ=15.1496;PV4=1,0.0646969,0.0234674,1 GT:PL 0/1:42,0,187
Scaffold_1 370422 . C T 202.033 PASS DP=11;VDB=0.362417;SGB=-0.651104;MQSB=0.62023;MQ0F=0.0909091;AF1=1;AC1=2;DP4=0,0,4,4;MQ=56;FQ=-50.986 GT:PL 1/1:235,24,0
Scaffold_1 371830 . T G 177.094 PASS DP=17;VDB=0.72907;SGB=-0.683931;RPB=0.538462;MQB=0.307692;MQSB=0;BQB=0.307692;MQ0F=0;AF1=0.510155;AC1=1;DP4=1,1,12,1;MQ=49;FQ=-13.1986;PV4=0.257143,1,1,1 GT:PL 0/1:207,0,14
Scaffold_1 371881 . T G 225.052 PASS DP=17;VDB=0.208746;SGB=-0.683931;RPB=0.538462;MQB=0.307692;MQSB=0.88692;BQB=0.692308;MQ0F=0;AF1=0.505038;AC1=1;DP4=1,1,9,4;MQ=48;FQ=-10.4007;PV4=1,0.254385,1,0.343109 GT:PL 0/1:255,0,17
Scaffold_1 372002 . A T 181.134 PASS DP=10;VDB=0.880071;SGB=-0.651104;RPB=1;MQB=1;MQSB=0.577865;BQB=1;MQ0F=0.1;AF1=1;AC1=2;DP4=1,0,2,6;MQ=41;FQ=-44.9861;PV4=0.333333,0.282273,1,0.207249 GT:PL 1/1:214,18,0
Scaffold_1 372034 . G A 219.026 PASS DP=13;VDB=0.317696;SGB=-0.676189;RPB=1;MQB=1;MQSB=0.707404;BQB=1;MQ0F=0.0769231;AF1=1;AC1=2;DP4=1,0,2,9;MQ=38;FQ=-51.986;PV4=0.25,1,1,0.299876 GT:PL 1/1:252,25,0
Scaffold_1 372071 . C T 225.544 PASS DP=20;VDB=0.540901;SGB=-0.688148;RPB=0.966667;MQB=0.533333;MQSB=0.955563;BQB=0.333333;MQ0F=0.1;AF1=1;AC1=2;DP4=2,0,4,11;MQ=38;FQ=-28.9912;PV4=0.110294,0.00309785,1,1 GT:PL 1/1:255,2,0
Scaffold_1 372081 . G A 226.462 PASS DP=20;VDB=0.28301;SGB=-0.686358;RPB=0.964286;MQB=0.535714;MQSB=0.924401;BQB=0.464286;MQ0F=0.1;AF1=0.829413;AC1=1;DP4=2,0,3,11;MQ=38;FQ=-25.9966;PV4=0.0833333,0.00180212,1,0.400698 GT:PL 0/1:255,0,1
Scaffold_1 372619 . G T 19.061 PASS DP=9;VDB=0.02;SGB=-0.453602;RPB=0.428571;MQB=1;MQSB=0.924584;BQB=0.571429;MQ0F=0;AF1=0.499997;AC1=1;DP4=3,4,0,2;MQ=60;FQ=22.0421;PV4=0.5,1,1,1 GT:PL 0/1:49,0,193
Scaffold_1 373438 . C T 41.0125 PASS DP=6;VDB=0.251321;SGB=-0.511536;RPB=0.333333;MQB=0;MQSB=1;BQB=1;MQ0F=0.333333;AF1=1;AC1=2;DP4=0,2,1,2;MQ=28;FQ=-29.9901;PV4=1,1,1,1 GT:PL 1/1:71,3,0
Scaffold_1 373440 . G T 40.1256 PASS DP=5;VDB=0.251321;SGB=-0.511536;RPB=1;MQB=1;MQSB=1;BQB=1;MQ0F=0.2;AF1=1;AC1=2;DP4=0,1,1,2;MQ=32;FQ=-31.9885;PV4=1,0.224071,1,1 GT:PL 1/1:71,5,0
Scaffold_1 373464 . G A 40.1256 PASS DP=4;VDB=0.251321;SGB=-0.511536;RPB=1;MQB=1;MQSB=1;BQB=1;MQ0F=0.25;AF1=1;AC1=2;DP4=0,1,1,2;MQ=32;FQ=-31.9885;PV4=1,0.333333,1,1 GT:PL 1/1:71,5,0
Scaffold_1 373494 . G A 36.0132 PASS DP=3;VDB=0.38;SGB=-0.453602;RPB=1;MQB=1;BQB=1;MQ0F=0.333333;AF1=1;AC1=2;DP4=0,1,0,2;MQ=36;FQ=-29.9901;PV4=1,0.333333,1,1 GT:PL 1/1:66,3,0
Scaffold_1 373767 . C T 20.3035 PASS DP=5;VDB=0.480825;SGB=-0.590765;MQSB=0;MQ0F=0.2;AF1=1;AC1=2;DP4=0,0,2,3;MQ=13;FQ=-41.9862 GT:PL 1/1:53,15,0
Scaffold_1 373952 . G A 73.2635 PASS DP=6;VDB=0.206846;SGB=-0.590765;MQSB=0.333333;MQ0F=0;AF1=1;AC1=2;DP4=0,0,3,2;MQ=26;FQ=-41.9862 GT:PL 1/1:106,15,0
Scaffold_1 375805 . G T 12.272 PASS DP=7;VDB=0.88;SGB=-0.453602;RPB=1;MQB=0;MQSB=1;BQB=0.75;MQ0F=0;AF1=0.499984;AC1=1;DP4=1,3,0,2;MQ=53;FQ=15.1496;PV4=1,0.316406,0.0013219,0.427383 GT:PL 0/1:42,0,124
Scaffold_1 380268 . G T 34.0087 PASS DP=12;VDB=0.0221621;SGB=-0.511536;RPB=0.0443614;MQB=1;MQSB=0.95494;BQB=0.760709;MQ0F=0;AF1=0.5;AC1=1;DP4=5,4,0,3;MQ=60;FQ=37.016;PV4=0.204545,1,1,0.163568 GT:PL 0/1:64,0,223
Scaffold_1 391609 . G A 138.008 PASS DP=18;VDB=0.716595;SGB=-0.651104;RPB=0.898397;MQB=0.0152181;MQSB=0.229925;BQB=0.546428;MQ0F=0.0555556;AF1=0.5;AC1=1;DP4=4,3,1,7;MQ=39;FQ=75.0156;PV4=0.118881,0.0418741,1,0.216283 GT:PL 0/1:168,0,102
Scaffold_1 391668 . A C 64.0073 PASS DP=17;VDB=0.0665174;SGB=-0.636426;RPB=0.0195619;MQB=0.0105628;MQSB=0.779947;BQB=0.759945;MQ0F=0.0588235;AF1=0.5;AC1=1;DP4=4,5,2,5;MQ=44;FQ=67.0155;PV4=0.632867,1,9.05559e-05,0.135575 GT:PL 0/1:94,0,208
Scaffold_1 391671 . C T 61.0073 PASS DP=17;VDB=0.114818;SGB=-0.616816;RPB=0.0253122;MQB=0.0137291;MQSB=0.492881;BQB=0.809155;MQ0F=0.0588235;AF1=0.5;AC1=1;DP4=4,6,1,5;MQ=47;FQ=64.0155;PV4=0.587912,1,6.7898e-05,0.103539 GT:PL 0/1:91,0,240
Scaffold_1 391694 . C A 197.009 PASS DP=16;VDB=0.000351473;SGB=-0.670168;RPB=0.0253122;MQB=0.0084133;MQSB=0.910176;BQB=0.963903;MQ0F=0.0625;AF1=0.500002;AC1=1;DP4=2,4,4,6;MQ=46;FQ=24.0321;PV4=1,1,1,1 GT:PL 0/1:227,0,51
Scaffold_1 391854 . T C 26.0177 PASS DP=10;VDB=0.145389;SGB=-0.556411;RPB=0.895781;MQB=0.0559863;BQB=0.895781;MQ0F=0.1;AF1=0.499999;AC1=1;DP4=0,6,0,4;MQ=49;FQ=29.0205;PV4=1,1,0.00105104,1 GT:PL 0/1:56,0,132
Scaffold_1 391858 . T A 26.0177 PASS DP=10;VDB=0.138245;SGB=-0.556411;RPB=0.895781;MQB=0.0559863;BQB=1.00775;MQ0F=0.1;AF1=0.499999;AC1=1;DP4=0,6,0,4;MQ=49;FQ=29.0205;PV4=1,1,0.00105104,1 GT:PL 0/1:56,0,130
Scaffold_1 391887 . G T 24.0241 PASS DP=7;VDB=0.192436;SGB=-0.511536;RPB=0.5;MQB=0;BQB=1;MQ0F=0.142857;AF1=0.499999;AC1=1;DP4=0,2,0,3;MQ=46;FQ=25.2636;PV4=1,0.412556,0.0741101,1 GT:PL 0/1:54,0,57
Scaffold_1 391909 . G A 24.0241 PASS DP=7;VDB=0.192436;SGB=-0.511536;RPB=0.202566;MQB=0.202566;BQB=0.810265;MQ0F=0.142857;AF1=0.499999;AC1=1;DP4=0,4,0,3;MQ=46;FQ=27.0228;PV4=1,1,0.0410817,0.181243 GT:PL 0/1:54,0,91
Scaffold_1 393183 . C T 26.5303 PASS DP=5;VDB=0.654404;SGB=-0.511536;RPB=0.666667;MQB=0;MQSB=0;BQB=1;MQ0F=0;AF1=0.571815;AC1=1;DP4=0,2,3,0;MQ=26;FQ=-21.0201;PV4=0.1,0.348214,1,0.247513 GT:PL 0/1:56,0,6
Scaffold_1 393198 . T G 50.521 PASS DP=6;VDB=0.779245;SGB=-0.511536;RPB=0;MQB=0;MQSB=0;BQB=0.5;MQ0F=0;AF1=0.571816;AC1=1;DP4=0,2,3,0;MQ=30;FQ=-21.0201;PV4=0.1,1,1,0.112345 GT:PL 0/1:80,0,6
Scaffold_1 393246 . T A 101.133 PASS DP=6;VDB=0.912587;SGB=-0.616816;MQSB=1;MQ0F=0;AF1=1;AC1=2;DP4=0,0,5,1;MQ=36;FQ=-44.9861 GT:PL 1/1:134,18,0
Scaffold_1 393258 . G A 77.5133 PASS DP=4;VDB=0.27062;SGB=-0.556411;MQSB=1;MQ0F=0;AF1=1;AC1=2;DP4=0,0,3,1;MQ=37;FQ=-38.9864 GT:PL 1/1:110,12,0
Scaffold_1 393263 . C T 74.5133 PASS DP=4;VDB=0.27062;SGB=-0.556411;MQSB=1;MQ0F=0;AF1=1;AC1=2;DP4=0,0,3,1;MQ=37;FQ=-38.9864 GT:PL 1/1:107,12,0
Scaffold_1 394067 . G C 74.9725 PASS DP=3;VDB=0.37344;SGB=-0.511536;MQSB=1;MQ0F=0;AF1=1;AC1=2;DP4=0,0,1,2;MQ=60;FQ=-35.9869 GT:PL 1/1:107,9,0
Scaffold_1 394073 . C T 108.514 PASS DP=4;VDB=0.811811;SGB=-0.556411;MQSB=1;MQ0F=0;AF1=1;AC1=2;DP4=0,0,1,3;MQ=59;FQ=-38.9864 GT:PL 1/1:141,12,0
Scaffold_1 394145 . C T 115.514 PASS DP=5;VDB=0.45314;SGB=-0.556411;MQSB=0;MQ0F=0;AF1=1;AC1=2;DP4=0,0,2,2;MQ=51;FQ=-38.9864 GT:PL 1/1:148,12,0
Scaffold_1 394151 . T C 144.264 PASS DP=5;VDB=0.618918;SGB=-0.590765;MQSB=0.333333;MQ0F=0;AF1=1;AC1=2;DP4=0,0,2,3;MQ=49;FQ=-41.9862 GT:PL 1/1:177,15,0
Scaffold_1 394176 . T A 121.264 PASS DP=5;VDB=0.640281;SGB=-0.590765;MQSB=0.666667;MQ0F=0;AF1=1;AC1=2;DP4=0,0,2,3;MQ=45;FQ=-41.9862 GT:PL 1/1:154,15,0
Scaffold_1 394179 . G T 129.264 PASS DP=5;VDB=0.640281;SGB=-0.590765;MQSB=0.666667;MQ0F=0;AF1=1;AC1=2;DP4=0,0,2,3;MQ=45;FQ=-41.9862 GT:PL 1/1:162,15,0
Scaffold_1 394191 . A C 136.264 PASS DP=5;VDB=0.631784;SGB=-0.590765;MQSB=0.666667;MQ0F=0;AF1=1;AC1=2;DP4=0,0,2,3;MQ=45;FQ=-41.9862 GT:PL 1/1:169,15,0
Scaffold_1 394222 . T C 114.514 PASS DP=5;VDB=0.573211;SGB=-0.556411;MQSB=1;MQ0F=0;AF1=1;AC1=2;DP4=0,0,2,2;MQ=42;FQ=-38.9864 GT:PL 1/1:147,12,0
Scaffold_1 394240 . T C 89.5135 PASS DP=5;VDB=0.573211;SGB=-0.556411;MQSB=1;MQ0F=0;AF1=1;AC1=2;DP4=0,0,2,2;MQ=42;FQ=-38.9864 GT:PL 1/1:122,12,0
Scaffold_1 394250 . C T 55.9722 PASS DP=3;VDB=0.259298;SGB=-0.511536;MQ0F=0;AF1=1;AC1=2;DP4=0,0,0,3;MQ=41;FQ=-35.9869 GT:PL 1/1:88,9,0
Scaffold_1 394252 . A C 66.9724 PASS DP=3;VDB=0.259298;SGB=-0.511536;MQ0F=0;AF1=1;AC1=2;DP4=0,0,0,3;MQ=41;FQ=-35.9869 GT:PL 1/1:99,9,0
Scaffold_1 394348 . C T 43.7647 PASS DP=3;VDB=0.02;SGB=-0.453602;MQ0F=0;AF1=1;AC1=2;DP4=0,0,0,2;MQ=58;FQ=-32.988 GT:PL 1/1:75,6,0
Scaffold_1 394353 . C T 39.765 PASS DP=2;VDB=0.02;SGB=-0.453602;MQ0F=0;AF1=1;AC1=2;DP4=0,0,0,2;MQ=58;FQ=-32.988 GT:PL 1/1:71,6,0
Scaffold_1 394381 . G A 63.9723 PASS DP=3;VDB=0.779245;SGB=-0.511536;MQ0F=0;AF1=1;AC1=2;DP4=0,0,0,3;MQ=52;FQ=-35.9869 GT:PL 1/1:96,9,0
Scaffold_1 394403 . C G 52.9722 PASS DP=3;VDB=0.78654;SGB=-0.511536;MQ0F=0;AF1=1;AC1=2;DP4=0,0,0,3;MQ=52;FQ=-35.9869 GT:PL 1/1:85,9,0
Scaffold_1 394421 . C T 60.9723 PASS DP=3;VDB=0.78654;SGB=-0.511536;MQ0F=0;AF1=1;AC1=2;DP4=0,0,0,3;MQ=52;FQ=-35.9869 GT:PL 1/1:93,9,0
Scaffold_1 394514 . G A 50.0126 PASS DP=6;VDB=0.0249187;SGB=-0.511536;RPB=0;MQB=0;BQB=1;MQ0F=0.166667;AF1=0.500629;AC1=1;DP4=2,0,3,0;MQ=47;FQ=-3.53092;PV4=1,0.348214,1,1 GT:PL 0/1:80,0,26
Scaffold_1 394537 . G C 46.0244 PASS DP=5;VDB=0.0279572;SGB=-0.511536;RPB=0;MQB=0;BQB=1;MQ0F=0.2;AF1=0.501994;AC1=1;DP4=2,0,3,0;MQ=47;FQ=-6.96163;PV4=1,0.424472,1,1 GT:PL 0/1:76,0,21
Scaffold_1 394594 . G A 12.272 PASS DP=8;VDB=0.74;SGB=-0.453602;RPB=0.25;MQB=0.5;BQB=0.75;MQ0F=0.125;AF1=0.499984;AC1=1;DP4=4,0,2,0;MQ=44;FQ=15.1496;PV4=1,0.351639,0.365432,1 GT:PL 0/1:42,0,96
Scaffold_1 394646 . G A 17.0924 PASS DP=12;VDB=0.0785113;SGB=-0.511536;RPB=0.594025;MQB=0.829029;MQSB=0.829029;BQB=0.920044;MQ0F=0.0833333;AF1=0.499995;AC1=1;DP4=6,2,2,1;MQ=37;FQ=20.058;PV4=1,0.1864,0.231276,1 GT:PL 0/1:47,0,174
Scaffold_1 394689 . C T 18.0749 PASS DP=18;VDB=0.327477;SGB=-0.511536;RPB=0.216663;MQB=0.682254;MQSB=0.99774;BQB=0.721955;MQ0F=0.222222;AF1=0.499996;AC1=1;DP4=10,3,3,0;MQ=31;FQ=21.0492;PV4=1,0.496176,1,1 GT:PL 0/1:48,0,154
Scaffold_1 394714 . C T 26.0177 PASS DP=16;VDB=0.476318;SGB=-0.590765;RPB=0.99778;MQB=1;MQSB=0.973096;BQB=0.980199;MQ0F=0.25;AF1=0.499999;AC1=1;DP4=8,1,3,2;MQ=29;FQ=29.0205;PV4=0.505495,0.250909,0.375565,1 GT:PL 0/1:56,0,119
Scaffold_1 394728 . A G 35.0083 PASS DP=17;VDB=0.865924;SGB=-0.556411;RPB=0.977751;MQB=0.612626;MQSB=0.816687;BQB=0.852144;MQ0F=0.235294;AF1=0.5;AC1=1;DP4=9,1,1,3;MQ=29;FQ=38.0155;PV4=0.040959,0.288876,1,0.00926852 GT:PL 0/1:65,0,107
Scaffold_1 394841 . C T 33.0091 PASS DP=11;VDB=0.12166;SGB=-0.616816;RPB=1.00775;MQB=0.167959;MQSB=0.4375;BQB=0.895781;MQ0F=0;AF1=0.5;AC1=1;DP4=2,2,6,0;MQ=28;FQ=36.0118;PV4=0.133333,0.260217,0.0320277,1 GT:PL 0/1:63,0,93
Scaffold_1 394873 . A G 12.272 PASS DP=21;VDB=0.732596;SGB=-0.511536;RPB=0.998247;MQB=0.364027;MQSB=1;BQB=1;MQ0F=0.047619;AF1=0.499984;AC1=1;DP4=10,5,3,0;MQ=29;FQ=15.1496;PV4=0.522059,0.279637,1,0.448998 GT:PL 0/1:42,0,168
Scaffold_1 394876 . A G 94.0077 PASS DP=22;VDB=0.638458;SGB=-0.616816;RPB=0.978966;MQB=0.0468303;MQSB=0.884751;BQB=0.969852;MQ0F=0.0909091;AF1=0.5;AC1=1;DP4=11,3,3,3;MQ=27;FQ=90.0426;PV4=0.302709,1,1,1 GT:PL 0/1:124,0,118
Scaffold_1 394932 . C A 42.0073 PASS DP=19;VDB=0.0815962;SGB=-0.590765;RPB=0.412539;MQB=0.645028;MQSB=0.984526;BQB=0.207196;MQ0F=0.157895;AF1=0.5;AC1=1;DP4=7,6,2,3;MQ=32;FQ=45.0154;PV4=1,0.0116614,1,1 GT:PL 0/1:72,0,198
Scaffold_1 394934 . C T 18.0749 PASS DP=19;VDB=0.243476;SGB=-0.511536;RPB=0.973096;MQB=0.782349;MQSB=0.94925;BQB=0.552148;MQ0F=0.157895;AF1=0.499996;AC1=1;DP4=7,4,1,2;MQ=30;FQ=21.0492;PV4=0.538462,0.24578,1,1 GT:PL 0/1:48,0,161
Scaffold_1 394953 . C G 14.176 PASS DP=21;VDB=0.431015;SGB=-0.511536;RPB=0.959189;MQB=0.430095;MQSB=0.959011;BQB=0.352866;MQ0F=0.142857;AF1=0.49999;AC1=1;DP4=8,4,0,3;MQ=32;FQ=17.1004;PV4=0.0769231,0.112851,1,1 GT:PL 0/1:44,0,158
Scaffold_1 394958 . G A 48.0072 PASS DP=22;VDB=0.345017;SGB=-0.590765;RPB=0.863325;MQB=0.863325;MQSB=0.938795;BQB=1;MQ0F=0.136364;AF1=0.5;AC1=1;DP4=6,7,4,1;MQ=34;FQ=51.0153;PV4=0.313726,0.246053,1,1 GT:PL 0/1:78,0,212
Scaffold_1 394964 . G A 53.0072 PASS DP=23;VDB=0.150948;SGB=-0.590765;RPB=0.995723;MQB=0.381255;MQSB=0.979382;BQB=0.061619;MQ0F=0.130435;AF1=0.5;AC1=1;DP4=8,6,2,3;MQ=34;FQ=56.0154;PV4=0.628483,0.0295599,1,1 GT:PL 0/1:83,0,211
Scaffold_1 394974 . A G 94.0077 PASS DP=22;VDB=0.936771;SGB=-0.636426;RPB=0.444739;MQB=0.720273;MQSB=0.581657;BQB=0.720273;MQ0F=0.136364;AF1=0.5;AC1=1;DP4=5,3,5,2;MQ=32;FQ=90.8225;PV4=1,0.138274,1,1 GT:PL 0/1:124,0,119
Scaffold_1 395031 . G A 17.0924 PASS DP=10;VDB=0.28;SGB=-0.453602;RPB=0.714286;MQB=0.285714;MQSB=0.487298;BQB=0.428571;MQ0F=0.1;AF1=0.499995;AC1=1;DP4=2,5,2,0;MQ=28;FQ=20.0566;PV4=0.166667,1,1,1 GT:PL 0/1:47,0,82
Scaffold_1 395088 . C T 11.3381 PASS DP=16;VDB=0.1;SGB=-0.453602;RPB=0.545455;MQB=0.181818;MQSB=0.699673;BQB=0.363636;MQ0F=0;AF1=0.49998;AC1=1;DP4=2,9,1,1;MQ=26;FQ=14.1838;PV4=0.423077,1,1,1 GT:PL 0/1:41,0,96
Scaffold_1 395181 . T C 29.0123 PASS DP=16;VDB=0.44936;SGB=-0.590765;RPB=0.728422;MQB=0.508203;MQSB=1;BQB=0.88692;MQ0F=0;AF1=0.5;AC1=1;DP4=1,9,0,5;MQ=32;FQ=32.0178;PV4=1,1,0.163495,0.0161165 GT:PL 0/1:59,0,153
Scaffold_1 395182 . C T 29.0123 PASS DP=16;VDB=0.45384;SGB=-0.590765;RPB=0.663189;MQB=0.730199;MQSB=1;BQB=0.460027;MQ0F=0;AF1=0.5;AC1=1;DP4=1,10,0,5;MQ=31;FQ=32.0178;PV4=1,0.0293322,0.263549,0.0120788 GT:PL 0/1:59,0,152
Scaffold_1 395206 . G A 15.1417 PASS DP=15;VDB=0.336489;SGB=-0.511536;RPB=0.400803;MQB=0.968368;MQSB=1;BQB=0.795669;MQ0F=0;AF1=0.499992;AC1=1;DP4=1,9,0,3;MQ=34;FQ=18.0829;PV4=1,0.222785,1,0.0748825 GT:PL 0/1:45,0,154
Scaffold_1 395213 . C T 13.2188 PASS DP=12;VDB=0.38;SGB=-0.453602;RPB=0.777778;MQB=0.0555556;MQSB=1;BQB=0.555556;MQ0F=0;AF1=0.499987;AC1=1;DP4=1,8,0,2;MQ=34;FQ=16.1222;PV4=1,1,1,1 GT:PL 0/1:43,0,117
Scaffold_1 395758 . C A 42.0074 PASS DP=10;VDB=0.0328229;SGB=-0.616816;RPB=0.462292;MQB=0.924584;MQSB=0.649731;BQB=0.924584;MQ0F=0.3;AF1=0.50001;AC1=1;DP4=2,1,2,4;MQ=30;FQ=17.0936;PV4=0.52381,0.140976,0.358197,1 GT:PL 0/1:72,0,44
Scaffold_1 398738 . G A 30.9754 PASS DP=3;VDB=0.11189;SGB=-0.511536;MQ0F=0;AF1=1;AC1=2;DP4=0,0,3,0;MQ=29;FQ=-35.9869 GT:PL 1/1:63,9,0
Scaffold_1 398919 . A T 31.0104 PASS DP=7;VDB=0.0175817;SGB=-0.556411;RPB=0.810265;MQB=0.405132;MQSB=0.810265;BQB=0.810265;MQ0F=0.142857;AF1=0.5;AC1=1;DP4=2,1,2,2;MQ=32;FQ=33.9825;PV4=1,1,0.0500243,0.280963 GT:PL 0/1:61,0,82
Scaffold_1 398925 . C T 31.0104 PASS DP=7;VDB=0.0175817;SGB=-0.556411;RPB=0.810265;MQB=0.405132;MQSB=0.810265;BQB=0.810265;MQ0F=0.142857;AF1=0.5;AC1=1;DP4=2,1,2,2;MQ=32;FQ=34.0031;PV4=1,1,0.0500243,0.170483 GT:PL 0/1:61,0,86
Scaffold_1 398960 . T C 20.0499 PASS DP=11;VDB=0.0162466;SGB=-0.556411;RPB=0.442128;MQB=0.924449;MQSB=0.655816;BQB=0.924449;MQ0F=0.454545;AF1=0.499997;AC1=1;DP4=6,1,2,2;MQ=26;FQ=23.036;PV4=0.490909,0.14877,1,1 GT:PL 0/1:50,0,89
Scaffold_1 398994 . G A 46.0072 PASS DP=14;VDB=0.00541072;SGB=-0.590765;RPB=0.135335;MQB=0.341108;MQSB=0.374629;BQB=0.411112;MQ0F=0.571429;AF1=0.500004;AC1=1;DP4=9,0,2,3;MQ=23;FQ=21.0423;PV4=0.0274725,1,1,1 GT:PL 0/1:76,0,48
Scaffold_1 403050 . C T 11.4477 PASS DP=7;VDB=0.0896691;SGB=-0.556411;RPB=0.5;MQB=0.25;MQSB=1;BQB=0;MQ0F=0.571429;AF1=1;AC1=2;DP4=2,0,3,1;MQ=14;FQ=-31.9888;PV4=1,1,1,0.255096 GT:PL 1/1:42,5,0
Scaffold_1 405092 . A G 27.7716 PASS DP=2;VDB=0.32;SGB=-0.453602;MQ0F=0;AF1=1;AC1=2;DP4=0,0,2,0;MQ=32;FQ=-32.988 GT:PL 1/1:59,6,0
Scaffold_1 405125 . T C 27.7716 PASS DP=2;VDB=0.32;SGB=-0.453602;MQ0F=0;AF1=1;AC1=2;DP4=0,0,2,0;MQ=32;FQ=-32.988 GT:PL 1/1:59,6,0
Scaffold_1 405148 . T C 14.1809 PASS DP=3;VDB=0.32;SGB=-0.453602;RPB=1;MQB=1;BQB=1;MQ0F=0;AF1=1;AC1=2;DP4=1,0,2,0;MQ=27;FQ=-29.9903;PV4=1,1,1,1 GT:PL 1/1:44,3,0
Scaffold_1 406615 . C T 15.1417 PASS DP=17;VDB=0.0190094;SGB=-0.556411;RPB=0.166643;MQB=0.658617;MQSB=0.22313;BQB=0.735784;MQ0F=0.294118;AF1=0.499992;AC1=1;DP4=8,3,4,0;MQ=24;FQ=18.0829;PV4=0.516484,1,1,0.0306932 GT:PL 0/1:45,0,94
Scaffold_1 406626 . G A 15.1417 PASS DP=19;VDB=0.0190094;SGB=-0.556411;RPB=0.166643;MQB=0.735784;MQSB=0.230769;BQB=0.872525;MQ0F=0.315789;AF1=0.499992;AC1=1;DP4=9,2,4,0;MQ=26;FQ=18.0829;PV4=1,0.493596,1,0.386447 GT:PL 0/1:45,0,95
Scaffold_1 406645 . T C 95.0095 PASS DP=20;VDB=0.0603829;SGB=-0.680642;RPB=0.896149;MQB=0.531752;MQSB=0.148002;BQB=0.875749;MQ0F=0.35;AF1=0.500199;AC1=1;DP4=4,2,11,1;MQ=26;FQ=5.46595;PV4=0.245098,0.196822,1,0.483348 GT:PL 0/1:125,0,31
Scaffold_1 406694 . C T 20.0499 PASS DP=21;VDB=0.898955;SGB=-0.590765;RPB=0.785785;MQB=0.933727;MQSB=0.0795595;BQB=0.995723;MQ0F=0.333333;AF1=0.499997;AC1=1;DP4=11,3,4,1;MQ=29;FQ=23.0366;PV4=1,0.452962,0.47669,0.285006 GT:PL 0/1:50,0,137
Scaffold_1 406733 . C G 47.0072 PASS DP=18;VDB=0.311141;SGB=-0.616816;RPB=0.20529;MQB=0.755254;MQSB=0.0145825;BQB=0.915014;MQ0F=0.277778;AF1=0.5;AC1=1;DP4=8,4,5,1;MQ=29;FQ=50.015;PV4=0.614846,1,1,1 GT:PL 0/1:77,0,119
Scaffold_1 406747 . A G 58.0073 PASS DP=15;VDB=0.869332;SGB=-0.556411;RPB=0.367879;MQB=0.697676;MQSB=0.0183156;BQB=0.367879;MQ0F=0.2;AF1=0.5;AC1=1;DP4=6,4,4,0;MQ=34;FQ=61.0147;PV4=0.250749,1,1,0.00966072 GT:PL 0/1:88,0,126
Scaffold_1 406778 . G A 28.0137 PASS DP=15;VDB=0.987865;SGB=-0.556411;RPB=1;MQB=0.658617;MQSB=0.0161635;BQB=0.356561;MQ0F=0.133333;AF1=0.5;AC1=1;DP4=8,3,3,1;MQ=36;FQ=31.0185;PV4=1,0.0514347,1,0.140773 GT:PL 0/1:58,0,156
Scaffold_1 406780 . G A 37.0079 PASS DP=16;VDB=0.100421;SGB=-0.556411;RPB=0.658617;MQB=0.808101;MQSB=0.0161635;BQB=0.77274;MQ0F=0.125;AF1=0.5;AC1=1;DP4=8,3,3,1;MQ=36;FQ=40.0156;PV4=1,1,1,1 GT:PL 0/1:67,0,159
Scaffold_1 406781 . C T 48.0072 PASS DP=16;VDB=0.927392;SGB=-0.590765;RPB=1;MQB=0.974658;MQSB=0.0144756;BQB=1;MQ0F=0.125;AF1=0.5;AC1=1;DP4=8,3,4,1;MQ=37;FQ=51.0153;PV4=1,1,1,1 GT:PL 0/1:78,0,158
Scaffold_1 406800 . T C 55.0072 PASS DP=17;VDB=0.197286;SGB=-0.590765;RPB=0.960687;MQB=0.924401;MQSB=0.0451717;BQB=0.663189;MQ0F=0;AF1=0.5;AC1=1;DP4=9,2,4,1;MQ=38;FQ=58.0154;PV4=1,1,0.368506,1 GT:PL 0/1:85,0,180
Scaffold_1 406807 . A G 43.0073 PASS DP=17;VDB=0.87268;SGB=-0.556411;RPB=0.841487;MQB=0.808101;MQSB=0.0342181;BQB=0.991513;MQ0F=0;AF1=0.5;AC1=1;DP4=8,3,4,0;MQ=39;FQ=46.0153;PV4=0.516484,0.322462,1,1 GT:PL 0/1:73,0,181
Scaffold_1 406816 . G A 47.0072 PASS DP=19;VDB=0.187998;SGB=-0.590765;RPB=0.573753;MQB=0.66939;MQSB=0.0131237;BQB=1;MQ0F=0;AF1=0.5;AC1=1;DP4=9,3,4,1;MQ=42;FQ=50.0153;PV4=1,0.396627,0.211474,1 GT:PL 0/1:77,0,209
Scaffold_1 406831 . A G 77.0075 PASS DP=16;VDB=0.258586;SGB=-0.590765;RPB=0.197899;MQB=0.175131;MQSB=0.298197;BQB=0.89683;MQ0F=0;AF1=0.5;AC1=1;DP4=7,2,3,2;MQ=44;FQ=80.0157;PV4=0.58042,0.417814,1,0.0269409 GT:PL 0/1:107,0,173
Scaffold_1 406855 . C T 25.0205 PASS DP=20;VDB=0.661214;SGB=-0.590765;RPB=0.906304;MQB=0.468083;MQSB=0.0887307;BQB=0.207196;MQ0F=0;AF1=0.499999;AC1=1;DP4=8,5,4,1;MQ=43;FQ=28.0219;PV4=0.614846,0.0251639,0.135742,0.225947 GT:PL 0/1:55,0,232
Scaffold_1 406880 . G A 46.0072 PASS DP=23;VDB=0.725151;SGB=-0.556411;RPB=0.56898;MQB=0.788004;MQSB=0.227079;BQB=0.443956;MQ0F=0;AF1=0.5;AC1=1;DP4=8,6,1,3;MQ=45;FQ=49.0153;PV4=0.576471,1,0.46051,0.274142 GT:PL 0/1:76,0,232
Scaffold_1 406904 . C T 60.0073 PASS DP=25;VDB=0.582158;SGB=-0.616816;RPB=0.965069;MQB=0.782705;MQSB=0.650737;BQB=0.867428;MQ0F=0;AF1=0.5;AC1=1;DP4=10,8,1,5;MQ=44;FQ=63.0154;PV4=0.165986,0.281903,0.389535,1 GT:PL 0/1:90,0,250
Scaffold_1 406924 . C T 111.008 PASS DP=27;VDB=0.93947;SGB=-0.676189;RPB=0.983099;MQB=0.0255615;MQSB=0.951607;BQB=0.983099;MQ0F=0;AF1=0.5;AC1=1;DP4=5,7,4,7;MQ=45;FQ=114.016;PV4=1,0.203338,0.00399677,1 GT:PL 0/1:141,0,255
Scaffold_1 406975 . G A 67.0074 PASS DP=24;VDB=0.152401;SGB=-0.651104;RPB=0.350305;MQB=0.0527093;MQSB=0.464383;BQB=0.598107;MQ0F=0;AF1=0.5;AC1=1;DP4=3,10,2,6;MQ=46;FQ=70.0155;PV4=1,1,0.00276603,1 GT:PL 0/1:97,0,240
Scaffold_1 407026 . G A 37.0079 PASS DP=22;VDB=0.752618;SGB=-0.616816;RPB=0.587071;MQB=0.128089;MQSB=0.0431656;BQB=0.719784;MQ0F=0;AF1=0.5;AC1=1;DP4=3,13,2,4;MQ=45;FQ=40.0156;PV4=0.585327,0.272158,0.0117847,0.441815 GT:PL 0/1:67,0,244
Scaffold_1 407126 . T C 84.0076 PASS DP=14;VDB=0.0769344;SGB=-0.616816;RPB=0.961166;MQB=0.777113;MQSB=0.863636;BQB=0.961166;MQ0F=0;AF1=0.5;AC1=1;DP4=1,6,1,5;MQ=42;FQ=87.0147;PV4=1,0.331283,0.165995,1 GT:PL 0/1:114,0,150
Scaffold_1 407134 . C T 90.0077 PASS DP=14;VDB=0.28128;SGB=-0.616816;RPB=0.931779;MQB=0.71154;MQSB=0.95;BQB=0.660716;MQ0F=0;AF1=0.5;AC1=1;DP4=1,5,1,5;MQ=42;FQ=92.6019;PV4=1,1,0.20484,1 GT:PL 0/1:120,0,130
Scaffold_1 407145 . T A 23.0285 PASS DP=14;VDB=0.87268;SGB=-0.556411;RPB=0.977751;MQB=0.527292;MQSB=0.791667;BQB=0.960789;MQ0F=0;AF1=0.499999;AC1=1;DP4=2,8,0,4;MQ=39;FQ=26.0258;PV4=1,0.281112,0.160796,0.0171302 GT:PL 0/1:53,0,176
Scaffold_1 407194 . C T 129.007 PASS DP=10;VDB=0.600763;SGB=-0.670168;MQSB=0.5625;MQ0F=0.1;AF1=1;AC1=2;DP4=0,0,2,8;MQ=34;FQ=-56.9861 GT:PL 1/1:162,30,0
Scaffold_1 407662 . G A 29.0151 PASS DP=6;VDB=0.509904;SGB=-0.511536;RPB=0.861511;MQB=0.861511;MQSB=1;BQB=0.28717;MQ0F=0.166667;AF1=0.500315;AC1=1;DP4=2,1,3,0;MQ=28;FQ=4.1308;PV4=1,1,1,1 GT:PL 0/1:59,0,29
Scaffold_1 407781 . T C 45.0072 PASS DP=11;VDB=0.851467;SGB=-0.511536;RPB=0.916482;MQB=0.366593;MQSB=0.279932;BQB=0.641538;MQ0F=0.181818;AF1=0.5;AC1=1;DP4=3,4,3,0;MQ=43;FQ=48.0016;PV4=0.2,1,1,1 GT:PL 0/1:75,0,100
Scaffold_1 407849 . C T 154.008 PASS DP=16;VDB=0.85857;SGB=-0.651104;RPB=0.586646;MQB=0.218985;MQSB=0.222635;BQB=0.399018;MQ0F=0.0625;AF1=0.5;AC1=1;DP4=4,2,5,3;MQ=51;FQ=117.016;PV4=1,1,0.0123291,0.156006 GT:PL 0/1:184,0,144
Scaffold_1 407906 . C T 64.0073 PASS DP=14;VDB=0.522837;SGB=-0.556411;RPB=0.97357;MQB=0.988166;MQSB=0.777113;BQB=0.953497;MQ0F=0.0714286;AF1=0.5;AC1=1;DP4=5,4,1,3;MQ=51;FQ=67.0155;PV4=0.559441,0.383867,1,1 GT:PL 0/1:94,0,200
Scaffold_1 407995 . C T 40.0075 PASS DP=9;VDB=0.935868;SGB=-0.556411;RPB=0.730948;MQB=0.730948;BQB=0.89338;MQ0F=0;AF1=0.5;AC1=1;DP4=0,5,0,4;MQ=46;FQ=43.0145;PV4=1,1,0.229316,1 GT:PL 0/1:70,0,107
Scaffold_1 408003 . C G 47.0072 PASS DP=9;VDB=0.851467;SGB=-0.511536;RPB=0.924584;MQB=0.924584;BQB=0.924584;MQ0F=0;AF1=0.5;AC1=1;DP4=0,6,0,3;MQ=46;FQ=50.0153;PV4=1,1,1,1 GT:PL 0/1:77,0,132
Scaffold_1 408341 . G A 20.0499 PASS DP=7;VDB=0.301053;SGB=-0.511536;RPB=0.333333;MQB=0;BQB=0.5;MQ0F=0.428571;AF1=0.500001;AC1=1;DP4=2,0,3,0;MQ=43;FQ=19.5246;PV4=1,1,0.046123,1 GT:PL 0/1:50,0,49
Scaffold_1 408361 . G A 49.0073 PASS DP=8;VDB=0.858927;SGB=-0.556411;RPB=0.810265;MQB=0.607698;BQB=0.607698;MQ0F=0.375;AF1=0.500006;AC1=1;DP4=3,0,4,0;MQ=40;FQ=19.0669;PV4=1,0.116599,1,0.110312 GT:PL 0/1:79,0,46
Scaffold_1 408466 . C T 12.272 PASS DP=8;VDB=0.0785113;SGB=-0.511536;RPB=0.900802;MQB=0.600535;MQSB=1;BQB=0.900802;MQ0F=0.125;AF1=0.499984;AC1=1;DP4=4,1,3,0;MQ=35;FQ=15.1496;PV4=1,0.410931,0.22802,1 GT:PL 0/1:42,0,100
Scaffold_1 408492 . G A 18.0749 PASS DP=10;VDB=0.303109;SGB=-0.556411;RPB=0.89338;MQB=0.487298;MQSB=0.285714;BQB=0.89338;MQ0F=0.1;AF1=0.499996;AC1=1;DP4=4,1,3,1;MQ=34;FQ=21.0491;PV4=1,0.357263,0.210259,1 GT:PL 0/1:48,0,104
Scaffold_1 408550 . G A 58.0073 PASS DP=13;VDB=0.845044;SGB=-0.590765;RPB=0.584657;MQB=0.506703;MQSB=0.584657;BQB=0.40926;MQ0F=0;AF1=0.5;AC1=1;DP4=5,2,2,3;MQ=41;FQ=61.0154;PV4=0.558081,0.136647,0.133735,0.480999 GT:PL 0/1:88,0,169
Scaffold_1 408568 . G A 20.0499 PASS DP=11;VDB=0.336489;SGB=-0.511536;RPB=0.920044;MQB=0.655816;MQSB=0.8618;BQB=0.655816;MQ0F=0;AF1=0.499997;AC1=1;DP4=5,3,0,3;MQ=47;FQ=23.0366;PV4=0.181818,1,0.192512,1 GT:PL 0/1:50,0,176
Scaffold_1 408578 . G A 23.0285 PASS DP=11;VDB=0.354794;SGB=-0.511536;RPB=0.916482;MQB=0.458241;MQSB=1.00775;BQB=0.641538;MQ0F=0;AF1=0.499999;AC1=1;DP4=4,3,0,3;MQ=49;FQ=26.0258;PV4=0.2,1,0.0349715,1 GT:PL 0/1:53,0,188
Scaffold_1 408621 . C G 100.008 PASS DP=7;VDB=0.160409;SGB=-0.556411;RPB=0.810265;MQB=0.202566;MQSB=0.810265;BQB=1.01283;MQ0F=0;AF1=0.500003;AC1=1;DP4=1,2,2,2;MQ=50;FQ=23.0366;PV4=1,1,1,1 GT:PL 0/1:130,0,50
Scaffold_1 408833 . G A 47.5417 PASS DP=5;VDB=0.431015;SGB=-0.511536;RPB=1;MQB=1;BQB=1;MQ0F=0;AF1=1;AC1=2;DP4=0,1,0,3;MQ=52;FQ=-28.9912;PV4=1,0.390633,1,1 GT:PL 1/1:77,2,0
Scaffold_1 409121 . T C 69.9724 PASS DP=3;VDB=0.37344;SGB=-0.511536;MQ0F=0;AF1=1;AC1=2;DP4=0,0,3,0;MQ=49;FQ=-35.9869 GT:PL 1/1:102,9,0
Scaffold_1 423487 . C A 57.0073 PASS DP=7;VDB=0.0221621;SGB=-0.511536;RPB=0.861511;MQB=0.861511;MQSB=0.861511;BQB=0.861511;MQ0F=0;AF1=0.5;AC1=1;DP4=0,3,3,0;MQ=60;FQ=57.0051;PV4=0.1,1,1,1 GT:PL 0/1:87,0,87
Scaffold_1 424518 . T A 20.0499 PASS DP=6;VDB=0.02;SGB=-0.453602;RPB=0.5;MQB=1;MQSB=1;BQB=0.875;MQ0F=0;AF1=0.499997;AC1=1;DP4=2,2,0,2;MQ=60;FQ=23.0366;PV4=0.466667,0.437126,1,1 GT:PL 0/1:50,0,121
Scaffold_1 441746 . G C 222 PASS DP=13;VDB=0.611332;SGB=-0.683931;MQSB=0.41985;MQ0F=0;AF1=1;AC1=2;DP4=0,0,5,8;MQ=48;FQ=-65.9862 GT:PL 1/1:255,39,0
Scaffold_1 441761 . A C 222.003 PASS DP=13;VDB=0.0825415;SGB=-0.676189;MQSB=0.979382;MQ0F=0;AF1=1;AC1=2;DP4=0,0,3,8;MQ=45;FQ=-59.9861 GT:PL 1/1:255,33,0
Scaffold_1 441803 . A G 222.001 PASS DP=15;VDB=0.158054;SGB=-0.680642;MQSB=0.962269;MQ0F=0;AF1=1;AC1=2;DP4=0,0,3,9;MQ=41;FQ=-62.9862 GT:PL 1/1:255,36,0
Scaffold_1 441807 . T A 222.001 PASS DP=13;VDB=0.153225;SGB=-0.680642;MQSB=0.962269;MQ0F=0;AF1=1;AC1=2;DP4=0,0,3,9;MQ=41;FQ=-62.9862 GT:PL 1/1:255,36,0
Scaffold_1 441813 . A C 222 PASS DP=14;VDB=0.563024;SGB=-0.686358;MQSB=0.606531;MQ0F=0;AF1=1;AC1=2;DP4=0,0,5,9;MQ=44;FQ=-68.9862 GT:PL 1/1:255,42,0
Scaffold_1 441823 . C T 222 PASS DP=14;VDB=0.574694;SGB=-0.686358;MQSB=0.606531;MQ0F=0;AF1=1;AC1=2;DP4=0,0,5,9;MQ=44;FQ=-68.9862 GT:PL 1/1:255,42,0
Scaffold_1 441841 . A T 222 PASS DP=14;VDB=0.669416;SGB=-0.686358;MQSB=0.301194;MQ0F=0;AF1=1;AC1=2;DP4=0,0,6,8;MQ=45;FQ=-68.9862 GT:PL 1/1:255,42,0
Scaffold_1 447647 . C A 19.061 PASS DP=9;VDB=0.02;SGB=-0.453602;RPB=0.571429;MQB=1;MQSB=1;BQB=0.714286;MQ0F=0;AF1=0.499997;AC1=1;DP4=6,1,2,0;MQ=60;FQ=22.0421;PV4=1,1,1,1 GT:PL 0/1:49,0,160
Scaffold_1 448758 . T C 12.272 PASS DP=9;VDB=0.02;SGB=-0.453602;RPB=0.857143;MQB=1;MQSB=0.974597;BQB=0.714286;MQ0F=0;AF1=0.499984;AC1=1;DP4=3,4,2,0;MQ=60;FQ=15.1496;PV4=0.444444,0.248019,1,1 GT:PL 0/1:42,0,198
Scaffold_1 451632 . G T 22.0341 PASS DP=7;VDB=0.02;SGB=-0.453602;RPB=0.4;MQB=1;MQSB=1.01283;BQB=0.3;MQ0F=0;AF1=0.499998;AC1=1;DP4=1,4,2,0;MQ=60;FQ=25.0286;PV4=0.142857,1,1,1 GT:PL 0/1:52,0,102
Scaffold_1 463925 . C T 10.42 PASS DP=12;VDB=0.02;SGB=-0.453602;RPB=1;MQB=0.6;MQSB=0.896474;BQB=0.7;MQ0F=0;AF1=0.499975;AC1=1;DP4=5,5,0,2;MQ=55;FQ=13.2265;PV4=0.469697,1,1,1 GT:PL 0/1:40,0,227
Scaffold_1 464600 . T G 11.3381 PASS DP=6;VDB=0.42;SGB=-0.453602;RPB=0.75;MQB=0;MQSB=0.5;BQB=0.75;MQ0F=0;AF1=0.49998;AC1=1;DP4=2,2,0,2;MQ=53;FQ=14.1838;PV4=0.466667,1,0.012886,0.455443 GT:PL 0/1:41,0,130
Scaffold_1 464602 . A C 11.3381 PASS DP=6;VDB=0.42;SGB=-0.453602;RPB=0.75;MQB=0;MQSB=0.5;BQB=0.5;MQ0F=0;AF1=0.49998;AC1=1;DP4=2,2,0,2;MQ=53;FQ=14.1838;PV4=0.466667,1,0.012886,1 GT:PL 0/1:41,0,122
Scaffold_1 464677 . T G 11.3381 PASS DP=8;VDB=0.42;SGB=-0.453602;RPB=0.875;MQB=0;MQSB=0.5;BQB=0.75;MQ0F=0;AF1=0.49998;AC1=1;DP4=2,2,0,2;MQ=53;FQ=14.1838;PV4=0.466667,1,0.012886,1 GT:PL 0/1:41,0,125
Scaffold_1 467740 . G A 23.0285 PASS DP=6;VDB=0.0481132;SGB=-0.511536;RPB=0.28717;MQB=0.574341;MQSB=0.5;BQB=0.861511;MQ0F=0;AF1=0.499999;AC1=1;DP4=1,2,3,0;MQ=51;FQ=26.0256;PV4=0.4,1,0.0763702,0.0264444 GT:PL 0/1:53,0,95
Scaffold_1 467768 . C A 18.0749 PASS DP=8;VDB=0.0433485;SGB=-0.511536;RPB=0.900802;MQB=0.450401;MQSB=0.900802;BQB=0.900802;MQ0F=0;AF1=0.499996;AC1=1;DP4=2,3,3,0;MQ=51;FQ=21.0492;PV4=0.196429,1,0.0546004,1 GT:PL 0/1:48,0,152
Scaffold_1 467795 . T C 29.0123 PASS DP=13;VDB=0.32;SGB=-0.453602;RPB=0.9;MQB=0.4;MQSB=0.542126;BQB=0.95;MQ0F=0;AF1=0.5;AC1=1;DP4=5,5,1,1;MQ=54;FQ=32.0178;PV4=1,1,0.428788,1 GT:PL 0/1:59,0,236
Scaffold_1 467815 . T G 27.0155 PASS DP=14;VDB=0.0411132;SGB=-0.511536;RPB=0.0443614;MQB=0.432745;MQSB=0.506703;BQB=1;MQ0F=0;AF1=0.499999;AC1=1;DP4=4,5,3,0;MQ=52;FQ=30.0194;PV4=0.204545,1,0.0294335,1 GT:PL 0/1:57,0,250
Scaffold_1 467830 . T G 56.0072 PASS DP=15;VDB=0.199299;SGB=-0.511536;RPB=0.879351;MQB=0.275467;MQSB=0.591555;BQB=0.985816;MQ0F=0;AF1=0.5;AC1=1;DP4=6,4,2,1;MQ=52;FQ=59.0154;PV4=1,1,0.240789,1 GT:PL 0/1:86,0,249
Scaffold_1 467844 . C T 19.061 PASS DP=17;VDB=0.0389723;SGB=-0.511536;RPB=0.0342181;MQB=0.352866;MQSB=0.605479;BQB=0.976835;MQ0F=0;AF1=0.499997;AC1=1;DP4=6,6,3,0;MQ=53;FQ=22.0421;PV4=0.228571,1,0.0103727,1 GT:PL 0/1:49,0,255
Scaffold_1 467845 . T A 29.0123 PASS DP=17;VDB=0.32;SGB=-0.453602;RPB=0.818182;MQB=0.363636;MQSB=0.84246;BQB=0.590909;MQ0F=0;AF1=0.5;AC1=1;DP4=7,4,1,1;MQ=54;FQ=32.0178;PV4=1,1,0.40383,1 GT:PL 0/1:59,0,255
Scaffold_1 467856 . G A 36.0081 PASS DP=17;VDB=0.318564;SGB=-0.511536;RPB=0.092944;MQB=0.952672;MQSB=0.77718;BQB=0.693041;MQ0F=0;AF1=0.5;AC1=1;DP4=5,6,3,0;MQ=55;FQ=39.0157;PV4=0.208791,1,0.256125,0.00294695 GT:PL 0/1:66,0,255
Scaffold_1 467877 . G A 32.0097 PASS DP=15;VDB=0.32;SGB=-0.453602;RPB=0.3;MQB=0.15;MQSB=0.896474;BQB=0.4;MQ0F=0;AF1=0.5;AC1=1;DP4=4,6,1,1;MQ=57;FQ=35.0165;PV4=1,1,0.0694387,0.00809854 GT:PL 0/1:62,0,252
Scaffold_1 467881 . T C 90.0077 PASS DP=14;VDB=0.112085;SGB=-0.556411;RPB=0.898397;MQB=0.0211283;MQSB=0.961166;BQB=0.381255;MQ0F=0;AF1=0.5;AC1=1;DP4=4,5,2,2;MQ=55;FQ=93.0158;PV4=1,1,0.000203045,0.069705 GT:PL 0/1:120,0,233
Scaffold_1 467903 . C A 16.1143 PASS DP=14;VDB=0.28;SGB=-0.453602;RPB=0.909091;MQB=0.272727;MQSB=0.961166;BQB=0.909091;MQ0F=0;AF1=0.499994;AC1=1;DP4=4,7,2,0;MQ=54;FQ=19.069;PV4=0.192308,1,0.242145,1 GT:PL 0/1:46,0,245
Scaffold_1 469280 . C G 12.272 PASS DP=10;VDB=0.0298006;SGB=-0.556411;RPB=0.649731;MQB=0.0812164;MQSB=0.285714;BQB=0.89338;MQ0F=0.1;AF1=0.499984;AC1=1;DP4=2,3,0,4;MQ=46;FQ=15.1496;PV4=0.444444,1,0.00127057,1 GT:PL 0/1:42,0,147
Scaffold_1 484420 . C A 16.1143 PASS DP=11;VDB=0.06;SGB=-0.453602;RPB=0.375;MQB=1;MQSB=1;BQB=0.625;MQ0F=0;AF1=0.499994;AC1=1;DP4=2,6,0,2;MQ=60;FQ=19.069;PV4=1,1,1,1 GT:PL 0/1:46,0,174
Scaffold_1 487658 . G T 27.0155 PASS DP=5;VDB=0.02;SGB=-0.453602;RPB=0;MQB=1;MQSB=1;BQB=1;MQ0F=0;AF1=0.499999;AC1=1;DP4=2,1,0,2;MQ=60;FQ=30.0185;PV4=0.4,1,1,1 GT:PL 0/1:57,0,94
Scaffold_1 496396 . G T 25.0205 PASS DP=7;VDB=0.02;SGB=-0.453602;RPB=0;MQB=1;MQSB=1;BQB=0.8;MQ0F=0;AF1=0.499999;AC1=1;DP4=4,1,2,0;MQ=60;FQ=28.0219;PV4=1,1,1,0.0362778 GT:PL 0/1:55,0,139
Scaffold_1 523835 . G T 19.061 PASS DP=9;VDB=0.02;SGB=-0.453602;RPB=0.285714;MQB=1;MQSB=0.974597;BQB=0.714286;MQ0F=0;AF1=0.499997;AC1=1;DP4=4,3,0,2;MQ=60;FQ=22.0421;PV4=0.444444,1,1,0.485003 GT:PL 0/1:49,0,186
Scaffold_1 530750 . T C 18.0749 PASS DP=7;VDB=0.06;SGB=-0.453602;RPB=0.8;MQB=0.8;MQSB=0.9;BQB=0.6;MQ0F=0.142857;AF1=0.499996;AC1=1;DP4=3,2,2,0;MQ=39;FQ=20.9423;PV4=1,0.466603,1,1 GT:PL 0/1:48,0,64
Scaffold_1 530789 . G T 22.0341 PASS DP=9;VDB=0.06;SGB=-0.453602;RPB=0.666667;MQB=0.666667;MQSB=1;BQB=0.833333;MQ0F=0.111111;AF1=0.499998;AC1=1;DP4=5,1,2,0;MQ=46;FQ=25.0286;PV4=1,1,1,1 GT:PL 0/1:52,0,109
Scaffold_1 530979 . T C 15.1417 PASS DP=9;VDB=0.94;SGB=-0.453602;RPB=0.857143;MQB=0.928571;MQSB=1;BQB=1;MQ0F=0.111111;AF1=0.499992;AC1=1;DP4=1,6,0,2;MQ=43;FQ=18.0829;PV4=1,1,1,0.172699 GT:PL 0/1:45,0,106
Scaffold_1 531023 . T G 31.0104 PASS DP=13;VDB=0.0942182;SGB=-0.590765;RPB=0.163537;MQB=0.0137638;MQSB=0.914584;BQB=0.804959;MQ0F=0.0769231;AF1=0.5;AC1=1;DP4=2,6,1,4;MQ=50;FQ=34.0168;PV4=1,1,4.1551e-05,1 GT:PL 0/1:61,0,184
Scaffold_1 531917 . A G 13.2188 PASS DP=14;VDB=0.154358;SGB=-0.511536;RPB=0.2628;MQB=0.693041;MQSB=0.0857407;BQB=0.862013;MQ0F=0.142857;AF1=0.499987;AC1=1;DP4=7,4,0,3;MQ=45;FQ=16.1222;PV4=0.192308,1,0.302456,1 GT:PL 0/1:43,0,174
Scaffold_1 531959 . T G 28.0137 PASS DP=10;VDB=0.166456;SGB=-0.511536;RPB=0.641538;MQB=0.824834;MQSB=0.333321;BQB=0.824834;MQ0F=0.1;AF1=0.5;AC1=1;DP4=5,2,0,3;MQ=43;FQ=31.0185;PV4=0.166667,1,0.344723,1 GT:PL 0/1:58,0,127
Scaffold_1 536208 . C A 12.272 PASS DP=9;VDB=0.22;SGB=-0.453602;RPB=0.857143;MQB=1;MQSB=0.974597;BQB=0.285714;MQ0F=0;AF1=0.499984;AC1=1;DP4=5,2,0,2;MQ=60;FQ=15.1496;PV4=0.166667,0.313142,1,1 GT:PL 0/1:42,0,188
Scaffold_1 542480 . G T 59.1254 PASS DP=29;VDB=0.695272;SGB=-0.636426;RPB=0.870979;MQB=0.00692263;MQSB=0.00692263;BQB=0.708654;MQ0F=0.586207;AF1=1;AC1=2;DP4=19,1,1,6;MQ=20;FQ=-31.9885;PV4=0.000158778,0.0778772,1,1 GT:PL 1/1:90,5,0
Scaffold_1 542503 . C T 116.46 PASS DP=42;VDB=0.716396;SGB=-0.676189;RPB=0.999513;MQB=0.0037884;MQSB=0.00142687;BQB=0.588395;MQ0F=0.452381;AF1=0.829413;AC1=1;DP4=28,0,5,6;MQ=19;FQ=-25.9966;PV4=0.000141604,1,1,0.463413 GT:PL 0/1:145,0,1
Scaffold_1 544719 . C T 15.1459 PASS DP=39;VDB=0.477568;SGB=-0.670168;RPB=0.826126;MQB=0.216921;MQSB=0.883397;BQB=0.634652;MQ0F=0.461538;AF1=0.500491;AC1=1;DP4=7,19,4,6;MQ=13;FQ=-3.03724;PV4=0.453937,1,1,1 GT:PL 0/1:45,0,27
Scaffold_1 545315 . T A 10.42 PASS DP=14;VDB=0.845044;SGB=-0.590765;RPB=0.0297172;MQB=0.8618;MQSB=0.924449;BQB=0.950952;MQ0F=0.357143;AF1=0.499975;AC1=1;DP4=3,3,4,1;MQ=22;FQ=13.2249;PV4=0.545455,0.298921,0.29132,1 GT:PL 0/1:40,0,74
Scaffold_1 545517 . A C 145.008 PASS DP=16;VDB=0.598931;SGB=-0.651104;RPB=1;MQB=0.141893;MQSB=0.928296;BQB=0.935229;MQ0F=0.1875;AF1=0.500001;AC1=1;DP4=3,2,6,2;MQ=37;FQ=28.0219;PV4=1,0.429205,1,0.390775 GT:PL 0/1:175,0,55
Scaffold_1 545559 . G A 144.011 PASS DP=14;VDB=0.237012;SGB=-0.651104;RPB=0.342519;MQB=0.0762218;MQSB=0.84246;BQB=0.50373;MQ0F=0.142857;AF1=0.500315;AC1=1;DP4=3,2,5,3;MQ=32;FQ=4.13346;PV4=1,1,1,0.226651 GT:PL 0/1:174,0,29
Scaffold_1 545893 . C G 116.013 PASS DP=17;VDB=0.548442;SGB=-0.662043;RPB=0.188548;MQB=0.0621765;MQSB=0.164989;BQB=0.998265;MQ0F=0.411765;AF1=1;AC1=2;DP4=1,5,4,5;MQ=24;FQ=-29.9901;PV4=0.58042,1,1,1 GT:PL 1/1:146,3,0
Scaffold_1 545894 . T A 138.194 PASS DP=17;VDB=0.508631;SGB=-0.670168;RPB=0.140858;MQB=0.105399;MQSB=0.0404015;BQB=0.655406;MQ0F=0.411765;AF1=1;AC1=2;DP4=0,4,5,5;MQ=27;FQ=-34.9872;PV4=0.220779,0.137997,1,1 GT:PL 1/1:170,8,0
Scaffold_1 545913 . G A 127.194 PASS DP=12;VDB=0.408947;SGB=-0.662043;RPB=0.596251;MQB=0.213796;MQSB=0.0974428;BQB=0.485672;MQ0F=0.333333;AF1=1;AC1=2;DP4=0,3,5,4;MQ=28;FQ=-34.9872;PV4=0.204545,0.104863,1,1 GT:PL 1/1:159,8,0
Scaffold_1 546007 . A C 21.1478 PASS DP=4;VDB=0.036923;SGB=-0.511536;RPB=1;MQB=1;MQSB=1;BQB=1;MQ0F=0.25;AF1=0.51285;AC1=1;DP4=0,1,1,2;MQ=27;FQ=-14.1563;PV4=1,1,0.454208,1 GT:PL 0/1:51,0,13
Scaffold_1 546100 . C G 206.018 PASS DP=24;VDB=0.0787609;SGB=-0.680642;RPB=0.674523;MQB=0.00246992;MQSB=0.352032;BQB=0.314383;MQ0F=0.0833333;AF1=0.500997;AC1=1;DP4=7,0,4,8;MQ=40;FQ=-4.75466;PV4=0.0128205,0.0403474,1,0.0643233 GT:PL 0/1:236,0,24
Scaffold_1 546151 . A C 225.044 PASS DP=23;VDB=0.830975;SGB=-0.686358;RPB=0.562801;MQB=0.00328731;MQSB=0.455794;BQB=0.884751;MQ0F=0.130435;AF1=0.503994;AC1=1;DP4=6,0,5,9;MQ=45;FQ=-9.50208;PV4=0.0140867,0.19421,1,1 GT:PL 0/1:255,0,18
Scaffold_1 546302 . G A 35.0083 PASS DP=24;VDB=0.0152419;SGB=-0.590765;RPB=0.692559;MQB=0.62535;MQSB=0.982789;BQB=0.736203;MQ0F=0.0833333;AF1=0.5;AC1=1;DP4=13,5,5,0;MQ=37;FQ=38.0158;PV4=0.545306,1,1,0.340825 GT:PL 0/1:65,0,208
Scaffold_1 546345 . G A 39.0076 PASS DP=33;VDB=0.00529893;SGB=-0.636426;RPB=0.972484;MQB=0.470262;MQSB=1;BQB=0.95394;MQ0F=0.121212;AF1=0.5;AC1=1;DP4=14,10,6,1;MQ=34;FQ=42.0155;PV4=0.371706,0.261605,1,1 GT:PL 0/1:69,0,250
Scaffold_1 546368 . G A 33.0091 PASS DP=40;VDB=0.168254;SGB=-0.636426;RPB=0.990262;MQB=0.252642;MQSB=0.983112;BQB=0.961614;MQ0F=0.15;AF1=0.5;AC1=1;DP4=17,12,7,0;MQ=32;FQ=36.0162;PV4=0.0703985,0.269345,1,0.316086 GT:PL 0/1:63,0,234
Scaffold_1 546374 . G A 24.0241 PASS DP=41;VDB=0.287141;SGB=-0.616816;RPB=0.999099;MQB=0.130987;MQSB=0.981224;BQB=0.672134;MQ0F=0.146341;AF1=0.499999;AC1=1;DP4=16,14,6,0;MQ=31;FQ=27.0236;PV4=0.0624605,1,1,0.295619 GT:PL 0/1:54,0,239
Scaffold_1 546438 . C T 114.008 PASS DP=41;VDB=0.649234;SGB=-0.683931;RPB=0.998226;MQB=0.0113067;MQSB=0.0305652;BQB=0.99723;MQ0F=0.243902;AF1=0.5;AC1=1;DP4=18,8,2,11;MQ=27;FQ=117.005;PV4=0.00219964,0.219066,1,0.472976 GT:PL 0/1:144,0,170
Scaffold_1 546636 . G A 35.0083 PASS DP=25;VDB=0.181258;SGB=-0.636426;RPB=0.994426;MQB=0.508445;MQSB=0.0366434;BQB=0.927599;MQ0F=0.2;AF1=0.5;AC1=1;DP4=10,5,0,7;MQ=37;FQ=38.0158;PV4=0.00534759,0.330037,0.12035,1 GT:PL 0/1:65,0,200
Scaffold_1 546645 . A G 45.0072 PASS DP=21;VDB=0.201452;SGB=-0.662043;RPB=0.0570609;MQB=0.203153;MQSB=0.0489347;BQB=0.993528;MQ0F=0.190476;AF1=0.5;AC1=1;DP4=6,5,1,8;MQ=37;FQ=48.0153;PV4=0.0702786,0.264379,0.0211281,1 GT:PL 0/1:75,0,191
Scaffold_1 546649 . G A 14.176 PASS DP=22;VDB=0.0459681;SGB=-0.616816;RPB=0.445457;MQB=0.396913;MQSB=0.0671455;BQB=0.496108;MQ0F=0.181818;AF1=0.49999;AC1=1;DP4=7,6,0,6;MQ=38;FQ=17.1004;PV4=0.0436017,1,0.0753827,1 GT:PL 0/1:44,0,208
Scaffold_1 546655 . G A 23.0285 PASS DP=22;VDB=0.0235349;SGB=-0.636426;RPB=0.02046;MQB=0.471945;MQSB=0.0671409;BQB=0.977926;MQ0F=0.272727;AF1=0.499999;AC1=1;DP4=6,6,0,7;MQ=37;FQ=26.0258;PV4=0.0436017,0.312483,0.056853,1 GT:PL 0/1:53,0,202
Scaffold_1 546755 . G A 20.0499 PASS DP=30;VDB=0.60156;SGB=-0.590765;RPB=0.769759;MQB=0.936675;MQSB=0.644112;BQB=0.738242;MQ0F=0.166667;AF1=0.499997;AC1=1;DP4=6,19,2,3;MQ=32;FQ=23.0366;PV4=0.589351,0.0702645,1,0.401593 GT:PL 0/1:50,0,224
Scaffold_1 546801 . A G 12.272 PASS DP=22;VDB=0.0221621;SGB=-0.511536;RPB=0.0716361;MQB=0.0242973;MQSB=0.993118;BQB=0.690244;MQ0F=0.181818;AF1=0.499984;AC1=1;DP4=5,14,0,3;MQ=29;FQ=15.1496;PV4=1,1,1,1 GT:PL 0/1:42,0,195
Scaffold_1 546973 . C T 90.0077 PASS DP=9;VDB=0.522837;SGB=-0.556411;RPB=0.868321;MQB=0.124046;MQSB=0.333333;BQB=0.62023;MQ0F=0;AF1=0.5;AC1=1;DP4=0,4,2,2;MQ=42;FQ=54.0148;PV4=0.428571,0.068959,1,1 GT:PL 0/1:120,0,81
Scaffold_1 546976 . G A 29.0123 PASS DP=10;VDB=0.102722;SGB=-0.511536;RPB=0.641538;MQB=0.458241;MQSB=0.183296;BQB=0.733186;MQ0F=0;AF1=0.5;AC1=1;DP4=3,4,0,3;MQ=42;FQ=32.0178;PV4=0.475,0.114757,0.235841,0.352397 GT:PL 0/1:59,0,169
Scaffold_1 547071 . A C 24.0241 PASS DP=9;VDB=0.121629;SGB=-0.511536;RPB=0.600535;MQB=0.150134;MQSB=0.248092;BQB=0.900802;MQ0F=0;AF1=0.499999;AC1=1;DP4=4,1,0,3;MQ=51;FQ=27.0236;PV4=0.142857,0.482324,0.00660393,1 GT:PL 0/1:54,0,133
Scaffold_1 548021 . C A 26.0177 PASS DP=4;VDB=0.02;SGB=-0.453602;RPB=0;MQB=0.5;MQSB=1;BQB=1;MQ0F=0;AF1=0.5;AC1=1;DP4=1,1,0,2;MQ=60;FQ=27.8289;PV4=1,1,0.211325,1 GT:PL 0/1:56,0,61
Scaffold_1 568119 . A G 47.0072 PASS DP=10;VDB=0.193383;SGB=-0.556411;RPB=0.0812164;MQB=0.89338;MQSB=0.924584;BQB=0.89338;MQ0F=0.5;AF1=0.500001;AC1=1;DP4=2,3,4,0;MQ=29;FQ=27.0019;PV4=0.166667,1,1,0.146176 GT:PL 0/1:77,0,54
Scaffold_1 573776 . G A 48.0072 PASS DP=12;VDB=0.714437;SGB=-0.556411;RPB=0.94394;MQB=0.0249144;MQSB=0.186356;BQB=0.98568;MQ0F=0;AF1=0.5;AC1=1;DP4=2,6,4,0;MQ=53;FQ=51.0153;PV4=0.0606061,0.276498,4.68523e-05,1 GT:PL 0/1:78,0,199
Scaffold_1 573788 . T C 46.0072 PASS DP=13;VDB=0.745967;SGB=-0.556411;RPB=0.94394;MQB=0.0249144;MQSB=0.253351;BQB=0.697274;MQ0F=0;AF1=0.5;AC1=1;DP4=3,5,4,0;MQ=53;FQ=49.0153;PV4=0.0808081,0.319138,4.68523e-05,1 GT:PL 0/1:76,0,214
Scaffold_1 573797 . C A 38.0077 PASS DP=12;VDB=0.126715;SGB=-0.511536;RPB=0.707404;MQB=0.0443614;MQSB=0.372712;BQB=0.382304;MQ0F=0;AF1=0.5;AC1=1;DP4=3,6,3,0;MQ=56;FQ=41.0155;PV4=0.181818,1,0,1 GT:PL 0/1:68,0,202
Scaffold_1 573802 . T G 41.0074 PASS DP=11;VDB=0.137328;SGB=-0.511536;RPB=0.829029;MQB=0.0497871;MQSB=0.356607;BQB=0.655816;MQ0F=0;AF1=0.5;AC1=1;DP4=3,5,3,0;MQ=55;FQ=44.0154;PV4=0.181818,1,0,1 GT:PL 0/1:71,0,204
Scaffold_1 573806 . T G 41.0074 PASS DP=11;VDB=0.126715;SGB=-0.511536;RPB=0.829029;MQB=0.0497871;MQSB=0.356607;BQB=0.472367;MQ0F=0;AF1=0.5;AC1=1;DP4=3,5,3,0;MQ=55;FQ=44.0154;PV4=0.181818,1,0,1 GT:PL 0/1:71,0,204
Scaffold_1 573818 . A C 51.0072 PASS DP=12;VDB=0.308689;SGB=-0.556411;RPB=0.838046;MQB=0.0249144;MQSB=0.896474;BQB=1;MQ0F=0;AF1=0.5;AC1=1;DP4=4,4,3,1;MQ=53;FQ=54.0154;PV4=0.575758,1,4.68523e-05,0.454909 GT:PL 0/1:81,0,217
Scaffold_1 573824 . A G 51.0072 PASS DP=12;VDB=0.292086;SGB=-0.556411;RPB=0.878264;MQB=0.0249144;MQSB=0.896474;BQB=0.98568;MQ0F=0;AF1=0.5;AC1=1;DP4=4,4,3,1;MQ=53;FQ=54.0154;PV4=0.575758,1,4.68523e-05,1 GT:PL 0/1:81,0,209
Scaffold_1 573845 . G T 32.0097 PASS DP=13;VDB=0.681156;SGB=-0.556411;RPB=0.803868;MQB=0.0401934;MQSB=0.979382;BQB=0.241161;MQ0F=0;AF1=0.5;AC1=1;DP4=5,2,3,1;MQ=52;FQ=35.0165;PV4=1,0.0400093,4.30487e-05,1 GT:PL 0/1:62,0,179
Scaffold_1 573850 . A T 67.0074 PASS DP=13;VDB=0.754056;SGB=-0.590765;RPB=0.958048;MQB=0.0137638;MQSB=0.97357;BQB=0.976181;MQ0F=0;AF1=0.5;AC1=1;DP4=5,3,4,1;MQ=52;FQ=70.0155;PV4=1,1,9.11059e-06,1 GT:PL 0/1:97,0,204
Scaffold_1 573943 . A T 53.0072 PASS DP=11;VDB=0.885471;SGB=-0.556411;RPB=0.730948;MQB=0.487298;MQSB=0.809011;BQB=0.243649;MQ0F=0;AF1=0.5;AC1=1;DP4=3,2,3,1;MQ=54;FQ=56.0143;PV4=1,1,0.0497796,1 GT:PL 0/1:83,0,119
Scaffold_1 573953 . C A 63.0073 PASS DP=11;VDB=0.598038;SGB=-0.511536;RPB=0.900802;MQB=0.750668;MQSB=0.833333;BQB=0.150134;MQ0F=0;AF1=0.5;AC1=1;DP4=3,2,3,0;MQ=57;FQ=66.0138;PV4=0.464286,1,0.109972,1 GT:PL 0/1:93,0,127
Scaffold_1 573954 . C A 53.0072 PASS DP=11;VDB=0.588406;SGB=-0.511536;RPB=0.924584;MQB=0.809011;MQSB=0.857143;BQB=0.115573;MQ0F=0;AF1=0.5;AC1=1;DP4=4,2,3,0;MQ=57;FQ=56.0154;PV4=0.5,1,0.0852353,1 GT:PL 0/1:83,0,146
Scaffold_1 573956 . T A 60.0073 PASS DP=11;VDB=0.598038;SGB=-0.511536;RPB=0.809011;MQB=0.809011;MQSB=0.809011;BQB=0.346719;MQ0F=0;AF1=0.5;AC1=1;DP4=3,3,3,0;MQ=57;FQ=63.0154;PV4=0.464286,1,0.0852353,1 GT:PL 0/1:90,0,154
Scaffold_1 573993 . A C 120.008 PASS DP=17;VDB=0.733112;SGB=-0.616816;RPB=0.99308;MQB=0.282063;MQSB=0.816632;BQB=0.984496;MQ0F=0;AF1=0.5;AC1=1;DP4=3,6,4,2;MQ=57;FQ=123.016;PV4=0.314685,1,0.0189551,1 GT:PL 0/1:150,0,207
Scaffold_1 574009 . G C 96.0077 PASS DP=16;VDB=0.281015;SGB=-0.590765;RPB=0.723173;MQB=0.50373;MQSB=0.989343;BQB=0.958048;MQ0F=0;AF1=0.5;AC1=1;DP4=2,6,3,2;MQ=57;FQ=99.0159;PV4=0.292929,1,0.0286735,1 GT:PL 0/1:126,0,202
Scaffold_1 574061 . C A 140.008 PASS DP=18;VDB=0.447761;SGB=-0.636426;RPB=0.667136;MQB=0.162817;MQSB=0.930476;BQB=0.571081;MQ0F=0;AF1=0.5;AC1=1;DP4=3,6,3,4;MQ=56;FQ=143.013;PV4=1,1,0.00834158,0.0222401 GT:PL 0/1:170,0,201
Scaffold_1 574063 . C A 115.008 PASS DP=16;VDB=0.291224;SGB=-0.636426;RPB=1;MQB=0.180092;MQSB=1;BQB=0.651439;MQ0F=0;AF1=0.5;AC1=1;DP4=3,5,1,6;MQ=55;FQ=118.016;PV4=0.569231,1,0.012105,0.150968 GT:PL 0/1:145,0,187
Scaffold_1 574075 . A G 106.008 PASS DP=17;VDB=0.291224;SGB=-0.636426;RPB=0.92664;MQB=0.148858;MQSB=0.99361;BQB=0.887766;MQ0F=0;AF1=0.5;AC1=1;DP4=3,7,1,6;MQ=56;FQ=109.016;PV4=0.602941,1,0.00576851,1 GT:PL 0/1:136,0,215
Scaffold_1 574106 . A G 38.0077 PASS DP=12;VDB=0.490096;SGB=-0.511536;RPB=0.916482;MQB=0.366593;MQSB=0.75;BQB=0.733186;MQ0F=0;AF1=0.5;AC1=1;DP4=2,5,0,3;MQ=56;FQ=41.0155;PV4=1,1,0.00667453,0.432001 GT:PL 0/1:68,0,187
Scaffold_1 574112 . G T 61.0073 PASS DP=12;VDB=0.43429;SGB=-0.556411;RPB=0.924449;MQB=0.200967;MQSB=0.666667;BQB=0.763675;MQ0F=0;AF1=0.5;AC1=1;DP4=2,5,0,4;MQ=56;FQ=64.0155;PV4=0.490909,1,0.0081904,0.393873 GT:PL 0/1:91,0,183
Scaffold_1 574120 . C T 31.0104 PASS DP=11;VDB=0.37344;SGB=-0.511536;RPB=0.824834;MQB=0.366593;MQSB=0.75;BQB=0.733186;MQ0F=0;AF1=0.5;AC1=1;DP4=2,5,0,3;MQ=58;FQ=34.0168;PV4=1,0.271019,0.0165591,1 GT:PL 0/1:61,0,181
Scaffold_1 574127 . G A 38.0077 PASS DP=8;VDB=0.382879;SGB=-0.511536;RPB=0.810265;MQB=0.405132;MQSB=0.6;BQB=0.405132;MQ0F=0;AF1=0.5;AC1=1;DP4=2,2,0,3;MQ=57;FQ=41.0155;PV4=0.428571,0.0819721,0.0629092,0.332422 GT:PL 0/1:68,0,130
Scaffold_1 576314 . G A 52.198 PASS DP=4;VDB=0.327477;SGB=-0.511536;RPB=1;MQB=1;MQSB=1;BQB=1;MQ0F=0;AF1=0.730437;AC1=1;DP4=1,0,0,3;MQ=32;FQ=-24.9994;PV4=0.25,1,1,1 GT:PL 0/1:81,0,2
Scaffold_1 576320 . C T 45.1981 PASS DP=4;VDB=0.327477;SGB=-0.511536;RPB=1;MQB=1;MQSB=1;BQB=1;MQ0F=0;AF1=0.730437;AC1=1;DP4=1,0,0,3;MQ=32;FQ=-24.9994;PV4=0.25,0.246411,1,1 GT:PL 0/1:74,0,2
Scaffold_1 576371 . T G 31.7673 PASS DP=2;VDB=0.42;SGB=-0.453602;MQ0F=0;AF1=1;AC1=2;DP4=0,0,0,2;MQ=35;FQ=-32.988 GT:PL 1/1:63,6,0
Scaffold_1 576538 . C G 84.1328 PASS DP=6;VDB=0.0697235;SGB=-0.616816;MQ0F=0;AF1=1;AC1=2;DP4=0,0,0,6;MQ=35;FQ=-44.9861 GT:PL 1/1:117,18,0
Scaffold_1 576545 . T A 89.1329 PASS DP=6;VDB=0.0697235;SGB=-0.616816;MQ0F=0;AF1=1;AC1=2;DP4=0,0,0,6;MQ=35;FQ=-44.9861 GT:PL 1/1:122,18,0
Scaffold_1 576547 . C T 82.2636 PASS DP=6;VDB=0.173131;SGB=-0.590765;MQ0F=0;AF1=1;AC1=2;DP4=0,0,0,5;MQ=34;FQ=-41.9862 GT:PL 1/1:115,15,0
Scaffold_1 576598 . C T 88.2637 PASS DP=5;VDB=0.0201525;SGB=-0.590765;MQ0F=0;AF1=1;AC1=2;DP4=0,0,0,5;MQ=37;FQ=-41.9862 GT:PL 1/1:121,15,0
Scaffold_1 576634 . G A 87.5135 PASS DP=5;VDB=0.0320192;SGB=-0.556411;MQ0F=0;AF1=1;AC1=2;DP4=0,0,0,4;MQ=40;FQ=-38.9864 GT:PL 1/1:120,12,0
Scaffold_1 577221 . A C 36.7654 PASS DP=2;VDB=0.1;SGB=-0.453602;MQSB=1;MQ0F=0;AF1=1;AC1=2;DP4=0,0,1,1;MQ=56;FQ=-32.988 GT:PL 1/1:68,6,0
Scaffold_1 577226 . C T 50.7647 PASS DP=2;VDB=0.1;SGB=-0.453602;MQSB=1;MQ0F=0;AF1=1;AC1=2;DP4=0,0,1,1;MQ=56;FQ=-32.988 GT:PL 1/1:82,6,0
Scaffold_1 577307 . C T 97.9728 PASS DP=4;VDB=0.450604;SGB=-0.511536;MQSB=1;MQ0F=0;AF1=1;AC1=2;DP4=0,0,2,1;MQ=51;FQ=-35.9869 GT:PL 1/1:130,9,0
Scaffold_1 577993 . C T 139.134 PASS DP=7;VDB=0.250121;SGB=-0.616816;MQSB=0;MQ0F=0;AF1=1;AC1=2;DP4=0,0,4,2;MQ=45;FQ=-44.9861 GT:PL 1/1:172,18,0
Scaffold_1 578046 . C T 75.2635 PASS DP=5;VDB=0.503385;SGB=-0.590765;MQSB=0;MQ0F=0;AF1=1;AC1=2;DP4=0,0,2,3;MQ=31;FQ=-41.9862 GT:PL 1/1:108,15,0
Scaffold_1 578156 . G A 107.264 PASS DP=5;VDB=0.011063;SGB=-0.590765;MQ0F=0;AF1=1;AC1=2;DP4=0,0,0,5;MQ=40;FQ=-41.9862 GT:PL 1/1:140,15,0
Scaffold_1 578238 . A G 107.264 PASS DP=5;VDB=0.011063;SGB=-0.590765;MQ0F=0;AF1=1;AC1=2;DP4=0,0,0,5;MQ=40;FQ=-41.9862 GT:PL 1/1:140,15,0
Scaffold_1 581571 . A G 17.0925 PASS DP=11;VDB=0.774933;SGB=-0.590765;RPB=0.904729;MQB=0.761877;MQSB=1;BQB=0.666643;MQ0F=0.363636;AF1=0.500011;AC1=1;DP4=4,1,5,0;MQ=21;FQ=13.998;PV4=1,0.0772686,1,1 GT:PL 0/1:47,0,42
Scaffold_1 581672 . G A 18.0749 PASS DP=18;VDB=0.733112;SGB=-0.616816;RPB=0.603475;MQB=0.922371;MQSB=0.0029283;BQB=0.603475;MQ0F=0.444444;AF1=0.499996;AC1=1;DP4=6,5,4,2;MQ=22;FQ=21.0483;PV4=1,1,1,0.0413915 GT:PL 0/1:48,0,85
Scaffold_1 581824 . G T 38.0077 PASS DP=20;VDB=0.0309674;SGB=-0.616816;RPB=0.0577303;MQB=0.261009;MQSB=0.965097;BQB=0.449625;MQ0F=0.2;AF1=0.5;AC1=1;DP4=6,6,4,2;MQ=19;FQ=31.5031;PV4=0.638009,1,1,1 GT:PL 0/1:68,0,59
Scaffold_1 581826 . C T 35.0083 PASS DP=22;VDB=0.0309674;SGB=-0.616816;RPB=0.188669;MQB=0.449625;MQSB=0.848133;BQB=0.281522;MQ0F=0.181818;AF1=0.5;AC1=1;DP4=5,7,4,2;MQ=22;FQ=35.8918;PV4=0.61991,1,1,1 GT:PL 0/1:65,0,67
Scaffold_1 581842 . A G 70.0074 PASS DP=22;VDB=0.0831832;SGB=-0.662043;RPB=0.281535;MQB=0.425993;MQSB=0.970446;BQB=0.6435;MQ0F=0.181818;AF1=0.5;AC1=1;DP4=3,7,7,2;MQ=23;FQ=43.0111;PV4=0.0697785,1,1,1 GT:PL 0/1:100,0,70
Scaffold_1 581905 . G A 59.0073 PASS DP=23;VDB=0.0469269;SGB=-0.636426;RPB=0.0364292;MQB=0.512426;MQSB=0.823708;BQB=0.104305;MQ0F=0.130435;AF1=0.5;AC1=1;DP4=1,13,5,2;MQ=23;FQ=58.4764;PV4=0.00554696,1,1,0.0646332 GT:PL 0/1:89,0,88
Scaffold_1 581922 . G A 102.008 PASS DP=21;VDB=0.317696;SGB=-0.676189;RPB=0.0568667;MQB=0.992359;MQSB=0.324652;BQB=0.488331;MQ0F=0.142857;AF1=0.5;AC1=1;DP4=0,8,4,7;MQ=25;FQ=43.0154;PV4=0.103199,1,1,1 GT:PL 0/1:132,0,70
Scaffold_1 581924 . A G 49.0072 PASS DP=21;VDB=0.0376133;SGB=-0.590765;RPB=0.0600547;MQB=0.573753;MQSB=0.460409;BQB=0.731616;MQ0F=0.142857;AF1=0.5;AC1=1;DP4=1,11,3,2;MQ=26;FQ=52.0044;PV4=0.052521,1,1,0.0888944 GT:PL 0/1:79,0,105
Scaffold_1 587730 . C G 25.0205 PASS DP=10;VDB=0.02;SGB=-0.453602;RPB=0.8;MQB=1;MQSB=1.01283;BQB=0.4;MQ0F=0;AF1=0.499999;AC1=1;DP4=4,1,0,2;MQ=60;FQ=28.0219;PV4=0.142857,1,1,1 GT:PL 0/1:55,0,116
Scaffold_1 608505 . C A 13.2188 PASS DP=11;VDB=0.02;SGB=-0.453602;RPB=0.444444;MQB=1;MQSB=1;BQB=0.777778;MQ0F=0;AF1=0.499987;AC1=1;DP4=3,6,0,2;MQ=60;FQ=16.1222;PV4=1,1,1,1 GT:PL 0/1:43,0,227
Scaffold_1 622310 . G T 10.42 PASS DP=14;VDB=0.02;SGB=-0.453602;RPB=0.4;MQB=1;MQSB=0.982603;BQB=0.6;MQ0F=0;AF1=0.499975;AC1=1;DP4=6,4,0,2;MQ=60;FQ=13.2265;PV4=0.454545,1,1,1 GT:PL 0/1:40,0,236
Scaffold_1 626178 . C T 16.1143 PASS DP=11;VDB=0.199299;SGB=-0.511536;RPB=0.900802;MQB=0.150134;MQSB=0.900802;BQB=0.900802;MQ0F=0;AF1=0.499994;AC1=1;DP4=2,3,1,2;MQ=50;FQ=19.069;PV4=1,0.45271,1.73861e-05,1 GT:PL 0/1:46,0,146
Scaffold_1 626179 . A G 12.272 PASS DP=10;VDB=0.206307;SGB=-0.511536;RPB=0.924584;MQB=0.115573;MQSB=0.89338;BQB=0.809011;MQ0F=0;AF1=0.499984;AC1=1;DP4=3,3,1,2;MQ=51;FQ=15.1496;PV4=1,1,2.85277e-06,0.313142 GT:PL 0/1:42,0,150
Scaffold_1 626189 . G C 35.0083 PASS DP=10;VDB=0.202231;SGB=-0.556411;RPB=0.895781;MQB=0.0559863;MQSB=0.952347;BQB=0.895781;MQ0F=0;AF1=0.5;AC1=1;DP4=3,3,2,2;MQ=49;FQ=38.0158;PV4=1,1,6.41158e-07,0.116916 GT:PL 0/1:65,0,156
Scaffold_1 626195 . T A 14.176 PASS DP=10;VDB=0.185719;SGB=-0.511536;RPB=0.900802;MQB=0.150134;MQSB=0.868321;BQB=0.750668;MQ0F=0;AF1=0.49999;AC1=1;DP4=2,3,2,1;MQ=50;FQ=17.1004;PV4=1,1,1.73861e-05,0.379721 GT:PL 0/1:44,0,128
Scaffold_1 629938 . G A 10.42 PASS DP=12;VDB=0.02;SGB=-0.453602;RPB=0.6;MQB=0.9;MQSB=0.962269;BQB=0.6;MQ0F=0;AF1=0.499975;AC1=1;DP4=7,3,2,0;MQ=58;FQ=13.2265;PV4=1,1,1,1 GT:PL 0/1:40,0,226
Scaffold_1 630866 . C T 49.0072 PASS DP=10;VDB=0.0221621;SGB=-0.511536;RPB=0.115573;MQB=0.924584;MQSB=0.974597;BQB=0.809011;MQ0F=0;AF1=0.5;AC1=1;DP4=1,5,3,0;MQ=60;FQ=52.0153;PV4=0.047619,1,1,1 GT:PL 0/1:79,0,156
Scaffold_1 630874 . G A 43.0073 PASS DP=10;VDB=0.0221621;SGB=-0.511536;RPB=0.274945;MQB=0.916482;MQSB=0.895781;BQB=0.824834;MQ0F=0;AF1=0.5;AC1=1;DP4=1,6,3,0;MQ=58;FQ=46.0153;PV4=0.0333333,1,1,1 GT:PL 0/1:73,0,164
Scaffold_1 630936 . G A 71.0074 PASS DP=12;VDB=0.0707707;SGB=-0.556411;RPB=0.98568;MQB=0.94394;MQSB=0.896474;BQB=0.125315;MQ0F=0;AF1=0.5;AC1=1;DP4=2,6,3,1;MQ=59;FQ=74.0156;PV4=0.222222,0.000596733,1,1 GT:PL 0/1:101,0,208
Scaffold_1 630937 . C T 74.0075 PASS DP=12;VDB=0.0645318;SGB=-0.556411;RPB=0.98568;MQB=0.94394;MQSB=0.896474;BQB=0.793923;MQ0F=0;AF1=0.5;AC1=1;DP4=2,6,3,1;MQ=59;FQ=77.0156;PV4=0.222222,0.0834448,1,1 GT:PL 0/1:104,0,208
Scaffold_1 631190 . T C 87.0076 PASS DP=12;VDB=0.00698754;SGB=-0.590765;RPB=0.0297172;MQB=0.0297172;MQSB=0.950952;BQB=0.8618;MQ0F=0;AF1=0.5;AC1=1;DP4=3,3,2,3;MQ=51;FQ=90.0103;PV4=1,1,0.00018073,0.000122565 GT:PL 0/1:117,0,146
Scaffold_1 631206 . G A 32.0097 PASS DP=12;VDB=0.0221621;SGB=-0.511536;RPB=0.0443614;MQB=0.25042;MQSB=0.931779;BQB=0.962269;MQ0F=0;AF1=0.5;AC1=1;DP4=6,3,0,3;MQ=51;FQ=35.0165;PV4=0.181818,1,0.100238,1 GT:PL 0/1:62,0,196
Scaffold_1 631233 . A C 15.1417 PASS DP=11;VDB=0.02;SGB=-0.453602;RPB=0.285714;MQB=0.142857;MQSB=0.89338;BQB=0.714286;MQ0F=0;AF1=0.499992;AC1=1;DP4=4,3,0,2;MQ=54;FQ=18.0829;PV4=0.444444,1,0.00922576,1 GT:PL 0/1:45,0,168
Scaffold_1 631255 . T C 80.0075 PASS DP=11;VDB=0.00842371;SGB=-0.590765;RPB=0.683497;MQB=0.0297172;MQSB=0.950952;BQB=0.742931;MQ0F=0;AF1=0.5;AC1=1;DP4=3,3,2,3;MQ=51;FQ=83.0157;PV4=1,0.280118,0.00018073,1 GT:PL 0/1:110,0,161
Scaffold_1 631258 . G A 26.0177 PASS DP=11;VDB=0.0221621;SGB=-0.511536;RPB=1;MQB=0.309786;MQSB=0.950952;BQB=0.655816;MQ0F=0;AF1=0.499999;AC1=1;DP4=5,3,0,3;MQ=51;FQ=29.0205;PV4=0.181818,0.278928,0.128876,1 GT:PL 0/1:56,0,189
Scaffold_1 631299 . C T 39.0076 PASS DP=11;VDB=0.0221621;SGB=-0.511536;RPB=0.472367;MQB=0.655816;MQSB=0.683497;BQB=0.954207;MQ0F=0;AF1=0.5;AC1=1;DP4=5,3,0,3;MQ=48;FQ=42.0155;PV4=0.181818,1,0.268014,1 GT:PL 0/1:69,0,182
Scaffold_1 631312 . T C 41.0074 PASS DP=11;VDB=0.0221621;SGB=-0.511536;RPB=0.274945;MQB=0.458241;MQSB=0.895781;BQB=0.916482;MQ0F=0;AF1=0.5;AC1=1;DP4=4,3,0,3;MQ=50;FQ=44.0154;PV4=0.2,1,0.107691,0.243177 GT:PL 0/1:71,0,183
Scaffold_1 631315 . G A 77.0075 PASS DP=10;VDB=0.255054;SGB=-0.556411;RPB=0.0812164;MQB=0.0812164;MQSB=0.89338;BQB=0.89338;MQ0F=0;AF1=0.5;AC1=1;DP4=2,3,2,2;MQ=51;FQ=80.0129;PV4=1,1,0.000167628,0.0175993 GT:PL 0/1:107,0,139
Scaffold_1 631328 . A T 37.0079 PASS DP=10;VDB=0.0221621;SGB=-0.511536;RPB=0.115573;MQB=0.115573;MQSB=0.571429;BQB=0.809011;MQ0F=0;AF1=0.5;AC1=1;DP4=2,4,0,3;MQ=54;FQ=40.0156;PV4=0.5,0.126213,0,0.00732193 GT:PL 0/1:67,0,175
Scaffold_1 631467 . A G 14.176 PASS DP=14;VDB=0.142856;SGB=-0.511536;RPB=0.496585;MQB=0.040184;MQSB=0.997028;BQB=0.968368;MQ0F=0;AF1=0.49999;AC1=1;DP4=7,3,2,1;MQ=55;FQ=17.1004;PV4=1,1,2.1282e-05,0.308534 GT:PL 0/1:44,0,221
Scaffold_1 631492 . T C 11.3381 PASS DP=16;VDB=0.131948;SGB=-0.511536;RPB=0.857404;MQB=0.0443614;MQSB=0.995736;BQB=0.760709;MQ0F=0;AF1=0.49998;AC1=1;DP4=7,2,2,1;MQ=54;FQ=14.1838;PV4=1,1,5.43946e-05,1 GT:PL 0/1:41,0,191
Scaffold_1 631528 . T A 17.0924 PASS DP=17;VDB=0.142856;SGB=-0.511536;RPB=0.447727;MQB=0.040184;MQSB=0.772727;BQB=0.597928;MQ0F=0;AF1=0.499995;AC1=1;DP4=9,1,2,1;MQ=55;FQ=20.058;PV4=0.423077,1,2.1282e-05,1 GT:PL 0/1:47,0,186
Scaffold_1 631535 . G A 14.176 PASS DP=17;VDB=0.142856;SGB=-0.511536;RPB=0.416546;MQB=0.0368832;MQSB=0.973096;BQB=0.505697;MQ0F=0;AF1=0.49999;AC1=1;DP4=9,2,2,1;MQ=55;FQ=17.1004;PV4=1,1,8.35083e-06,1 GT:PL 0/1:44,0,203
Scaffold_1 631543 . T G 17.0924 PASS DP=17;VDB=0.154358;SGB=-0.511536;RPB=0.879351;MQB=0.0496096;MQSB=0.863636;BQB=0.447727;MQ0F=0;AF1=0.499995;AC1=1;DP4=9,1,2,1;MQ=53;FQ=20.058;PV4=0.423077,1,0.000272936,1 GT:PL 0/1:47,0,179
Scaffold_1 631692 . A G 10.42 PASS DP=17;VDB=0.0422968;SGB=-0.556411;RPB=0.0632055;MQB=0.0161635;MQSB=0.581345;BQB=0.926163;MQ0F=0;AF1=0.499975;AC1=1;DP4=7,4,1,3;MQ=53;FQ=13.2265;PV4=0.282051,1,3.61537e-08,0.0490005 GT:PL 0/1:40,0,247
Scaffold_1 631727 . T C 10.42 PASS DP=20;VDB=0.0467807;SGB=-0.556411;RPB=0.579578;MQB=0.0161635;MQSB=0.840624;BQB=0.166643;MQ0F=0;AF1=0.499975;AC1=1;DP4=5,6,1,3;MQ=53;FQ=13.2265;PV4=0.604396,1,3.47474e-08,1 GT:PL 0/1:40,0,222
Scaffold_1 633855 . G T 34.0087 PASS DP=11;VDB=0.810473;SGB=-0.590765;RPB=0.891517;MQB=0.0297172;MQSB=1;BQB=0.950952;MQ0F=0;AF1=0.5;AC1=1;DP4=5,1,5,0;MQ=51;FQ=37.016;PV4=1,0.148333,0.0107342,0.107173 GT:PL 0/1:64,0,151
Scaffold_1 633868 . T C 40.0075 PASS DP=13;VDB=0.810473;SGB=-0.590765;RPB=0.95494;MQB=0.0194886;MQSB=0.5;BQB=0.935451;MQ0F=0;AF1=0.5;AC1=1;DP4=5,2,5,0;MQ=52;FQ=43.0154;PV4=0.469697,0.355696,0.00635683,0.263868 GT:PL 0/1:70,0,184
Scaffold_1 633895 . G A 42.0073 PASS DP=11;VDB=0.459448;SGB=-0.556411;RPB=0.895781;MQB=0.0559863;MQSB=1;BQB=0.895781;MQ0F=0;AF1=0.5;AC1=1;DP4=5,1,4,0;MQ=54;FQ=45.0154;PV4=1,1,0.0264035,0.120752 GT:PL 0/1:72,0,159
Scaffold_1 633912 . G A 51.0072 PASS DP=12;VDB=0.693673;SGB=-0.590765;RPB=0.896474;MQB=0.0974428;MQSB=0.6;BQB=0.95494;MQ0F=0;AF1=0.5;AC1=1;DP4=5,2,5,0;MQ=55;FQ=54.0154;PV4=0.469697,0.322682,0.0326584,0.0387666 GT:PL 0/1:81,0,171
Scaffold_1 633944 . G A 62.0073 PASS DP=14;VDB=0.360777;SGB=-0.556411;RPB=0.924449;MQB=0.924449;MQSB=1;BQB=0.924449;MQ0F=0;AF1=0.5;AC1=1;DP4=5,2,3,1;MQ=52;FQ=65.0155;PV4=1,1,0.48923,1 GT:PL 0/1:92,0,162
Scaffold_1 633994 . G A 109.008 PASS DP=15;VDB=0.361542;SGB=-0.616816;RPB=0.77718;MQB=0.664757;MQSB=0.884706;BQB=0.875173;MQ0F=0;AF1=0.5;AC1=1;DP4=5,3,5,1;MQ=51;FQ=112.016;PV4=0.58042,1,0.336614,1 GT:PL 0/1:139,0,190
Scaffold_1 633995 . C T 114.008 PASS DP=15;VDB=0.348672;SGB=-0.616816;RPB=0.740818;MQB=0.664757;MQSB=0.884706;BQB=0.84472;MQ0F=0;AF1=0.5;AC1=1;DP4=5,3,5,1;MQ=51;FQ=117.016;PV4=0.58042,1,0.336614,1 GT:PL 0/1:144,0,190
Scaffold_1 634032 . A G 140.008 PASS DP=18;VDB=0.145385;SGB=-0.662043;RPB=0.132336;MQB=0.03464;MQSB=0.88901;BQB=0.994413;MQ0F=0;AF1=0.5;AC1=1;DP4=4,3,8,1;MQ=50;FQ=143.006;PV4=0.261538,0.406014,0.00203436,1 GT:PL 0/1:170,0,196
Scaffold_1 634072 . G A 117.008 PASS DP=20;VDB=0.430692;SGB=-0.636426;RPB=0.690645;MQB=0.0694755;MQSB=0.982609;BQB=0.990815;MQ0F=0;AF1=0.5;AC1=1;DP4=8,3,4,3;MQ=50;FQ=120.016;PV4=0.626697,1,0.0429826,1 GT:PL 0/1:147,0,243
Scaffold_1 634081 . G A 106.008 PASS DP=18;VDB=0.810984;SGB=-0.616816;RPB=0.939413;MQB=0.0346967;MQSB=0.99308;BQB=0.399156;MQ0F=0.0555556;AF1=0.5;AC1=1;DP4=6,3,3,3;MQ=51;FQ=109.016;PV4=0.622378,1,0.0450765,0.329315 GT:PL 0/1:136,0,221
Scaffold_1 634088 . G T 103.008 PASS DP=17;VDB=0.796638;SGB=-0.616816;RPB=0.740818;MQB=0.00822975;MQSB=0.927743;BQB=0.967216;MQ0F=0.0588235;AF1=0.5;AC1=1;DP4=5,3,3,3;MQ=52;FQ=106.016;PV4=1,0.36124,0.00197874,0.0119708 GT:PL 0/1:133,0,227
Scaffold_1 634096 . G A 106.008 PASS DP=18;VDB=0.810984;SGB=-0.616816;RPB=0.569783;MQB=0.00632972;MQSB=0.985046;BQB=0.399156;MQ0F=0.0555556;AF1=0.5;AC1=1;DP4=5,4,3,3;MQ=53;FQ=109.016;PV4=1,1,0.00112075,0.0998602 GT:PL 0/1:136,0,234
Scaffold_1 634123 . T C 61.0073 PASS DP=16;VDB=0.417842;SGB=-0.616816;RPB=0.309248;MQB=0.00632972;MQSB=0.692463;BQB=0.150977;MQ0F=0.0625;AF1=0.5;AC1=1;DP4=4,5,1,5;MQ=51;FQ=64.0155;PV4=0.58042,0.00778786,9.53084e-05,1 GT:PL 0/1:91,0,234
Scaffold_1 634136 . A T 96.0077 PASS DP=15;VDB=0.575705;SGB=-0.651104;RPB=0.269146;MQB=0.00524752;MQSB=0.579578;BQB=0.97357;MQ0F=0.0666667;AF1=0.5;AC1=1;DP4=3,4,1,7;MQ=48;FQ=99.0159;PV4=0.282051,1,0.000275026,0.142349 GT:PL 0/1:126,0,180
Scaffold_1 634137 . C T 95.0077 PASS DP=15;VDB=0.510343;SGB=-0.616816;RPB=0.939413;MQB=0.134399;MQSB=0.579578;BQB=0.868815;MQ0F=0.0666667;AF1=0.5;AC1=1;DP4=3,6,1,5;MQ=48;FQ=98.0159;PV4=0.604396,1,0.0466116,0.139989 GT:PL 0/1:125,0,208
Scaffold_1 634138 . A G 95.0077 PASS DP=15;VDB=0.573839;SGB=-0.636426;RPB=0.651439;MQB=0.0289435;MQSB=0.579578;BQB=0.985046;MQ0F=0.0666667;AF1=0.5;AC1=1;DP4=3,5,1,6;MQ=48;FQ=98.0159;PV4=0.569231,1,0.000968513,0.16658 GT:PL 0/1:125,0,195
Scaffold_1 634191 . T G 90.0077 PASS DP=17;VDB=0.192892;SGB=-0.636426;RPB=0.295105;MQB=0.00524752;MQSB=0.188548;BQB=0.993326;MQ0F=0.0588235;AF1=0.5;AC1=1;DP4=5,3,1,6;MQ=49;FQ=93.0158;PV4=0.118881,1,9.30887e-05,1 GT:PL 0/1:120,0,197
Scaffold_1 634220 . T C 68.0074 PASS DP=15;VDB=0.337235;SGB=-0.556411;RPB=0.558035;MQB=0.236815;MQSB=0.342519;BQB=0.826565;MQ0F=0;AF1=0.5;AC1=1;DP4=4,5,1,3;MQ=50;FQ=71.0155;PV4=1,1,0.120056,0.393327 GT:PL 0/1:98,0,214
Scaffold_1 634234 . G A 60.0073 PASS DP=16;VDB=0.0587288;SGB=-0.556411;RPB=0.323961;MQB=0.146957;MQSB=0.114218;BQB=0.735784;MQ0F=0;AF1=0.5;AC1=1;DP4=7,4,1,3;MQ=51;FQ=63.0154;PV4=0.282051,0.437916,0.0741668,1 GT:PL 0/1:90,0,228
Scaffold_1 634235 . G A 51.0072 PASS DP=16;VDB=0.0587288;SGB=-0.556411;RPB=0.405555;MQB=0.18452;MQSB=0.0577239;BQB=0.655406;MQ0F=0;AF1=0.5;AC1=1;DP4=7,3,1,3;MQ=51;FQ=54.0154;PV4=0.244755,0.0566675,0.094158,1 GT:PL 0/1:81,0,208
Scaffold_1 634263 . C A 68.0074 PASS DP=14;VDB=0.0587288;SGB=-0.556411;RPB=0.072179;MQB=0.0249144;MQSB=0.203896;BQB=0.397295;MQ0F=0;AF1=0.5;AC1=1;DP4=7,1,1,3;MQ=54;FQ=71.0155;PV4=0.0666667,0.0233578,2.06577e-08,0.0834448 GT:PL 0/1:98,0,185
Scaffold_1 634272 . T C 42.0073 PASS DP=15;VDB=0.0587288;SGB=-0.556411;RPB=0.0391339;MQB=0.0161635;MQSB=0.581345;BQB=0.0391339;MQ0F=0;AF1=0.5;AC1=1;DP4=7,4,1,3;MQ=55;FQ=45.0154;PV4=0.282051,0.00622696,9.27923e-11,0.19243 GT:PL 0/1:72,0,255
Scaffold_1 634275 . T G 13.2188 PASS DP=15;VDB=0.192436;SGB=-0.511536;RPB=0.092944;MQB=0.0368832;MQSB=0.428703;BQB=0.927041;MQ0F=0;AF1=0.499987;AC1=1;DP4=7,4,0,3;MQ=56;FQ=16.1222;PV4=0.192308,0.0626066,5.87483e-10,0.0828571 GT:PL 0/1:43,0,255
Scaffold_1 634281 . G A 49.0072 PASS DP=16;VDB=0.882362;SGB=-0.556411;RPB=0.540226;MQB=0.0161635;MQSB=0.546428;BQB=0.293091;MQ0F=0;AF1=0.5;AC1=1;DP4=7,4,1,3;MQ=55;FQ=52.0153;PV4=0.282051,0.0214887,2.92215e-11,0.0442684 GT:PL 0/1:79,0,255
Scaffold_1 634291 . C T 52.0072 PASS DP=17;VDB=0.879194;SGB=-0.556411;RPB=0.397295;MQB=0.0131237;MQSB=0.600245;BQB=0.730444;MQ0F=0;AF1=0.5;AC1=1;DP4=8,5,1,3;MQ=55;FQ=55.0154;PV4=0.294118,1,6.76648e-13,0.252067 GT:PL 0/1:82,0,255
Scaffold_1 636316 . C T 26.0177 PASS DP=12;VDB=0.267404;SGB=-0.511536;RPB=0.382304;MQB=0.0443614;MQSB=0.506703;BQB=0.811069;MQ0F=0;AF1=0.499999;AC1=1;DP4=4,5,3,0;MQ=55;FQ=29.0205;PV4=0.204545,1,3.66813e-07,0.180226 GT:PL 0/1:56,0,212
Scaffold_1 636337 . C A 32.0097 PASS DP=11;VDB=0.267404;SGB=-0.511536;RPB=0.472367;MQB=0.0497871;MQSB=0.562708;BQB=0.954207;MQ0F=0;AF1=0.5;AC1=1;DP4=4,4,3,0;MQ=55;FQ=35.0165;PV4=0.236364,1,1.56923e-06,1 GT:PL 0/1:62,0,219
Scaffold_1 636340 . A G 32.0097 PASS DP=12;VDB=0.267404;SGB=-0.511536;RPB=0.472367;MQB=0.0497871;MQSB=0.562708;BQB=0.829029;MQ0F=0;AF1=0.5;AC1=1;DP4=4,4,3,0;MQ=55;FQ=35.0165;PV4=0.236364,1,1.56923e-06,1 GT:PL 0/1:62,0,207
Scaffold_1 636350 . T C 32.0097 PASS DP=12;VDB=0.267404;SGB=-0.511536;RPB=0.472367;MQB=0.0497871;MQSB=0.562708;BQB=0.954207;MQ0F=0;AF1=0.5;AC1=1;DP4=4,4,3,0;MQ=55;FQ=35.0165;PV4=0.236364,1,1.56923e-06,1 GT:PL 0/1:62,0,222
Scaffold_1 636366 . A G 32.0097 PASS DP=12;VDB=0.28399;SGB=-0.511536;RPB=0.829029;MQB=0.0497871;MQSB=0.562708;BQB=0.829029;MQ0F=0;AF1=0.5;AC1=1;DP4=4,4,3,0;MQ=55;FQ=35.0165;PV4=0.236364,1,1.56923e-06,1 GT:PL 0/1:62,0,213
Scaffold_1 636369 . G A 29.0123 PASS DP=12;VDB=0.28399;SGB=-0.511536;RPB=0.829029;MQB=0.0497871;MQSB=0.562708;BQB=1;MQ0F=0;AF1=0.5;AC1=1;DP4=4,4,3,0;MQ=55;FQ=32.0178;PV4=0.236364,1,1.56923e-06,1 GT:PL 0/1:59,0,204
Scaffold_1 636380 . C T 15.1417 PASS DP=12;VDB=0.267404;SGB=-0.511536;RPB=0.707404;MQB=0.0443614;MQSB=0.372712;BQB=0.652235;MQ0F=0;AF1=0.499992;AC1=1;DP4=3,6,3,0;MQ=55;FQ=18.0829;PV4=0.181818,0.134638,3.66813e-07,1 GT:PL 0/1:45,0,216
Scaffold_1 636393 . T C 26.0177 PASS DP=13;VDB=0.28399;SGB=-0.511536;RPB=0.707404;MQB=0.0443614;MQSB=0.506703;BQB=0.540433;MQ0F=0;AF1=0.499999;AC1=1;DP4=4,5,3,0;MQ=55;FQ=29.0205;PV4=0.204545,1,3.66813e-07,1 GT:PL 0/1:56,0,216
Scaffold_1 636407 . A G 26.0177 PASS DP=12;VDB=0.301053;SGB=-0.511536;RPB=0.472367;MQB=0.0497871;MQSB=0.562708;BQB=0.994805;MQ0F=0;AF1=0.499999;AC1=1;DP4=4,4,3,0;MQ=55;FQ=29.0205;PV4=0.236364,1,1.56923e-06,0.197995 GT:PL 0/1:56,0,197
Scaffold_1 636606 . C A 51.0072 PASS DP=10;VDB=0.939765;SGB=-0.556411;RPB=0.895781;MQB=0.0559863;MQSB=0.6875;BQB=0.895781;MQ0F=0;AF1=0.5;AC1=1;DP4=1,5,1,3;MQ=51;FQ=54.0153;PV4=1,0.348635,2.40282e-05,0.212037 GT:PL 0/1:81,0,149
Scaffold_1 636633 . A T 41.0074 PASS DP=8;VDB=0.663511;SGB=-0.511536;RPB=0.900802;MQB=0.150134;MQSB=0.900802;BQB=0.750668;MQ0F=0;AF1=0.5;AC1=1;DP4=2,3,1,2;MQ=52;FQ=44.0154;PV4=1,0.265497,0.000405016,0.472781 GT:PL 0/1:71,0,146
Scaffold_1 636680 . G A 12.272 PASS DP=10;VDB=0.02;SGB=-0.453602;RPB=0.75;MQB=0;MQSB=0.666643;BQB=0.5;MQ0F=0;AF1=0.499984;AC1=1;DP4=5,3,0,2;MQ=57;FQ=15.1496;PV4=0.444444,0.0176326,0,1 GT:PL 0/1:42,0,221
Scaffold_1 636707 . A G 17.0924 PASS DP=9;VDB=0.02;SGB=-0.453602;RPB=0.285714;MQB=0;MQSB=0.487298;BQB=0.857143;MQ0F=0;AF1=0.499995;AC1=1;DP4=5,2,0,2;MQ=56;FQ=20.058;PV4=0.166667,1,0,1 GT:PL 0/1:47,0,192
Scaffold_1 665970 . T C 65.2634 PASS DP=8;VDB=0.109713;SGB=-0.636426;RPB=1;MQB=1;MQSB=1;BQB=1;MQ0F=0.125;AF1=1;AC1=2;DP4=1,0,0,7;MQ=23;FQ=-41.9862;PV4=0.125,0.347746,1,1 GT:PL 1/1:98,15,0
Scaffold_1 673474 . T C 12.272 PASS DP=18;VDB=0.327477;SGB=-0.511536;RPB=0.395316;MQB=0.0693617;MQSB=0.447612;BQB=0.776754;MQ0F=0;AF1=0.499984;AC1=1;DP4=8,7,3,0;MQ=55;FQ=15.1496;PV4=0.245098,1,0.00719895,0.0100304 GT:PL 0/1:42,0,255
Scaffold_1 673510 . T C 15.1417 PASS DP=19;VDB=0.327477;SGB=-0.511536;RPB=0.639909;MQB=0.0764263;MQSB=0.30569;BQB=0.639909;MQ0F=0;AF1=0.499992;AC1=1;DP4=6,8,3,0;MQ=55;FQ=18.0829;PV4=0.205882,1,0.00968696,1 GT:PL 0/1:45,0,255
Scaffold_1 673524 . G A 21.0411 PASS DP=15;VDB=0.336489;SGB=-0.511536;RPB=0.997399;MQB=0.0959671;MQSB=0.180092;BQB=0.91051;MQ0F=0;AF1=0.499998;AC1=1;DP4=4,8,3,0;MQ=54;FQ=24.0321;PV4=0.0769231,1,0.0176451,1 GT:PL 0/1:51,0,233
Scaffold_1 673542 . T G 12.272 PASS DP=17;VDB=0.336489;SGB=-0.511536;RPB=0.907354;MQB=0.0764263;MQSB=0.30569;BQB=0.951607;MQ0F=0;AF1=0.499984;AC1=1;DP4=6,8,3,0;MQ=55;FQ=15.1496;PV4=0.205882,1,0.00968696,1 GT:PL 0/1:42,0,255
Scaffold_1 673757 . T C 10.42 PASS DP=16;VDB=0.800701;SGB=-0.511536;RPB=0.895064;MQB=0.032027;MQSB=0.785714;BQB=0.560355;MQ0F=0;AF1=0.499975;AC1=1;DP4=2,11,0,3;MQ=56;FQ=13.2265;PV4=1,0.0979494,1.85036e-12,0.357723 GT:PL 0/1:40,0,239
Scaffold_1 673758 . A G 10.42 PASS DP=16;VDB=0.800701;SGB=-0.511536;RPB=0.945009;MQB=0.032027;MQSB=0.785714;BQB=0.797523;MQ0F=0;AF1=0.499975;AC1=1;DP4=2,11,0,3;MQ=56;FQ=13.2265;PV4=1,0.318662,1.85036e-12,0.399368 GT:PL 0/1:40,0,232
Scaffold_1 677695 . C A 16.1143 PASS DP=10;VDB=0.02;SGB=-0.453602;RPB=0.75;MQB=1;MQSB=0.916482;BQB=0.5;MQ0F=0;AF1=0.499994;AC1=1;DP4=3,5,0,2;MQ=60;FQ=19.069;PV4=1,1,1,1 GT:PL 0/1:46,0,193
Scaffold_1 680397 . G T 10.42 PASS DP=12;VDB=0.02;SGB=-0.453602;RPB=0.444444;MQB=1;MQSB=1;BQB=0.833333;MQ0F=0;AF1=0.499975;AC1=1;DP4=8,1,0,2;MQ=60;FQ=13.2265;PV4=0.0545455,1,1,1 GT:PL 0/1:40,0,178
Scaffold_1 680482 . A G 13.2188 PASS DP=13;VDB=0.48;SGB=-0.453602;RPB=0.555556;MQB=1;MQSB=1;BQB=0.444444;MQ0F=0;AF1=0.499987;AC1=1;DP4=8,1,2,0;MQ=60;FQ=16.1222;PV4=1,1,1,1 GT:PL 0/1:43,0,180
Scaffold_1 680485 . G A 19.061 PASS DP=11;VDB=0.48;SGB=-0.453602;RPB=0.714286;MQB=1;BQB=0.571429;MQ0F=0;AF1=0.499997;AC1=1;DP4=7,0,2,0;MQ=60;FQ=22.0421;PV4=1,1,1,1 GT:PL 0/1:49,0,146
Scaffold_1 680507 . C A 16.1143 PASS DP=13;VDB=0.267404;SGB=-0.511536;RPB=0.995736;MQB=1;MQSB=1;BQB=0.540433;MQ0F=0;AF1=0.499994;AC1=1;DP4=8,1,3,0;MQ=60;FQ=19.069;PV4=1,0.0577297,1,1 GT:PL 0/1:46,0,182
Scaffold_1 680513 . C G 27.0155 PASS DP=13;VDB=0.228191;SGB=-0.511536;RPB=0.995736;MQB=1;MQSB=1;BQB=0.652235;MQ0F=0;AF1=0.499999;AC1=1;DP4=8,1,3,0;MQ=60;FQ=30.0194;PV4=1,0.268377,1,1 GT:PL 0/1:57,0,186
Scaffold_1 680573 . G A 70.0074 PASS DP=18;VDB=0.00992398;SGB=-0.556411;RPB=0.0632055;MQB=1;MQSB=1;BQB=0.236847;MQ0F=0;AF1=0.5;AC1=1;DP4=9,2,2,2;MQ=60;FQ=73.0156;PV4=0.516484,0.140629,1,1 GT:PL 0/1:100,0,255
Scaffold_1 680584 . G A 98.0078 PASS DP=16;VDB=0.00655935;SGB=-0.590765;RPB=0.472367;MQB=1;MQSB=1;BQB=0.581657;MQ0F=0;AF1=0.5;AC1=1;DP4=6,4,2,3;MQ=60;FQ=101.016;PV4=0.608392,0.486099,1,1 GT:PL 0/1:128,0,241
Scaffold_1 680591 . A C 98.0078 PASS DP=17;VDB=0.00895694;SGB=-0.590765;RPB=0.697005;MQB=1;MQSB=1;BQB=0.526391;MQ0F=0;AF1=0.5;AC1=1;DP4=7,4,2,3;MQ=60;FQ=101.016;PV4=0.596154,1,1,1 GT:PL 0/1:128,0,229
Scaffold_1 680616 . A G 125.008 PASS DP=24;VDB=0.145738;SGB=-0.636426;RPB=0.817714;MQB=1;MQSB=1;BQB=0.817714;MQ0F=0;AF1=0.5;AC1=1;DP4=8,7,3,4;MQ=60;FQ=128.016;PV4=1,1,1,0.298018 GT:PL 0/1:155,0,255
Scaffold_1 680636 . G A 138.008 PASS DP=24;VDB=0.132938;SGB=-0.636426;RPB=0.950934;MQB=1;MQSB=1;BQB=0.0991442;MQ0F=0;AF1=0.5;AC1=1;DP4=6,9,3,4;MQ=60;FQ=141.016;PV4=1,1,1,1 GT:PL 0/1:168,0,255
Scaffold_1 680638 . C T 146.008 PASS DP=24;VDB=0.129862;SGB=-0.636426;RPB=0.985816;MQB=1;MQSB=1;BQB=0.839457;MQ0F=0;AF1=0.5;AC1=1;DP4=5,7,3,4;MQ=60;FQ=149.017;PV4=1,1,1,1 GT:PL 0/1:176,0,255
Scaffold_1 680657 . A C 107.008 PASS DP=24;VDB=0.0602347;SGB=-0.590765;RPB=0.76338;MQB=1;MQSB=1;BQB=0.309786;MQ0F=0;AF1=0.5;AC1=1;DP4=6,4,3,2;MQ=60;FQ=110.016;PV4=1,1,1,1 GT:PL 0/1:137,0,227
Scaffold_1 680661 . C T 71.0074 PASS DP=24;VDB=0.125998;SGB=-0.590765;RPB=0.431711;MQB=1;MQSB=1;BQB=0.878409;MQ0F=0;AF1=0.5;AC1=1;DP4=6,8,2,3;MQ=60;FQ=74.0156;PV4=1,0.225773,1,1 GT:PL 0/1:101,0,255
Scaffold_1 680676 . G T 134.008 PASS DP=21;VDB=0.293058;SGB=-0.616816;RPB=0.20529;MQB=0.85394;MQSB=0.85394;BQB=0.644941;MQ0F=0.047619;AF1=0.5;AC1=1;DP4=3,9,3,3;MQ=59;FQ=137.016;PV4=0.344053,1,0.0817427,0.00199099 GT:PL 0/1:164,0,246
Scaffold_1 680683 . C T 102.008 PASS DP=25;VDB=0.218338;SGB=-0.616816;RPB=0.0734307;MQB=0.84037;MQSB=0.84037;BQB=0.997286;MQ0F=0.04;AF1=0.5;AC1=1;DP4=3,13,3,3;MQ=59;FQ=105.016;PV4=0.28286,1,0.0517826,0.30732 GT:PL 0/1:132,0,253
Scaffold_1 680690 . G A 93.0077 PASS DP=26;VDB=0.153613;SGB=-0.590765;RPB=0.0756927;MQB=0.801124;MQSB=0.869574;BQB=0.996936;MQ0F=0.0384615;AF1=0.5;AC1=1;DP4=5,12,2,3;MQ=59;FQ=96.0159;PV4=1,1,0.0316913,0.380214 GT:PL 0/1:123,0,255
Scaffold_1 680704 . C T 13.2188 PASS DP=25;VDB=0.0785113;SGB=-0.511536;RPB=0.110342;MQB=0.659241;MQSB=0.889418;BQB=0.901075;MQ0F=0.04;AF1=0.499987;AC1=1;DP4=6,14,2,1;MQ=59;FQ=16.1222;PV4=0.268775,1,0.00324603,1 GT:PL 0/1:43,0,255
Scaffold_1 680909 . C T 34.0087 PASS DP=12;VDB=0.779245;SGB=-0.511536;RPB=0.962269;MQB=0.707404;MQSB=0.9;BQB=0.933909;MQ0F=0;AF1=0.5;AC1=1;DP4=2,7,0,3;MQ=59;FQ=37.016;PV4=1,1,0.0407767,0.173407 GT:PL 0/1:64,0,200
Scaffold_1 680915 . G A 34.0087 PASS DP=12;VDB=0.779245;SGB=-0.511536;RPB=1;MQB=0.716531;MQSB=1;BQB=0.774755;MQ0F=0;AF1=0.5;AC1=1;DP4=1,7,0,3;MQ=59;FQ=37.016;PV4=1,0.319191,0.0519441,0.0154199 GT:PL 0/1:64,0,174
Scaffold_1 680916 . A G 41.0074 PASS DP=12;VDB=0.78654;SGB=-0.511536;RPB=1;MQB=0.716531;MQSB=1;BQB=0.920044;MQ0F=0;AF1=0.5;AC1=1;DP4=1,7,0,3;MQ=59;FQ=44.0154;PV4=1,1,0.0519441,0.0152729 GT:PL 0/1:71,0,175
Scaffold_1 680930 . C T 16.1143 PASS DP=10;VDB=0.42;SGB=-0.453602;RPB=0.571429;MQB=0.5;MQSB=1;BQB=1;MQ0F=0;AF1=0.499994;AC1=1;DP4=1,6,0,2;MQ=59;FQ=19.069;PV4=1,1,0.0261782,1 GT:PL 0/1:46,0,166
Scaffold_1 680934 . C T 16.1143 PASS DP=10;VDB=0.42;SGB=-0.453602;RPB=0.5;MQB=0.5;MQSB=1;BQB=0.5;MQ0F=0;AF1=0.499994;AC1=1;DP4=1,7,0,2;MQ=59;FQ=19.069;PV4=1,1,0.0176326,1 GT:PL 0/1:46,0,164
Scaffold_1 680935 . C A 19.061 PASS DP=10;VDB=0.38;SGB=-0.453602;RPB=0.571429;MQB=0.5;BQB=1;MQ0F=0;AF1=0.499997;AC1=1;DP4=0,7,0,2;MQ=59;FQ=22.0421;PV4=1,1,0.0261782,1 GT:PL 0/1:49,0,151
Scaffold_1 680936 . A T 16.1143 PASS DP=10;VDB=0.38;SGB=-0.453602;RPB=0.5;MQB=0.5;MQSB=1;BQB=0.625;MQ0F=0;AF1=0.499994;AC1=1;DP4=1,7,0,2;MQ=59;FQ=19.069;PV4=1,1,0.0176326,1 GT:PL 0/1:46,0,185
Scaffold_1 680937 . C T 13.2188 PASS DP=11;VDB=0.38;SGB=-0.453602;RPB=0.666667;MQB=0.5;MQSB=0.888889;BQB=0.888889;MQ0F=0;AF1=0.499987;AC1=1;DP4=2,7,0,2;MQ=59;FQ=16.1222;PV4=1,1,0.0119282,1 GT:PL 0/1:43,0,217
Scaffold_1 680966 . A C 43.0073 PASS DP=10;VDB=0.192436;SGB=-0.511536;RPB=0.916482;MQB=0.366593;MQSB=0.824834;BQB=0.733186;MQ0F=0;AF1=0.5;AC1=1;DP4=3,4,0,3;MQ=59;FQ=46.0153;PV4=0.475,1,0.0176326,1 GT:PL 0/1:73,0,181
Scaffold_1 680974 . G A 34.0087 PASS DP=12;VDB=0.107235;SGB=-0.511536;RPB=0.716531;MQB=0.263597;MQSB=0.763675;BQB=0.716531;MQ0F=0;AF1=0.5;AC1=1;DP4=4,4,0,3;MQ=59;FQ=37.016;PV4=0.236364,0.102044,0.0115166,1 GT:PL 0/1:64,0,238
Scaffold_1 682298 . C A 13.2188 PASS DP=15;VDB=0.02;SGB=-0.453602;RPB=0;MQB=1;MQSB=0.950952;BQB=0.666667;MQ0F=0;AF1=0.499987;AC1=1;DP4=5,4,0,2;MQ=60;FQ=16.1222;PV4=0.454545,1,1,0.000558336 GT:PL 0/1:43,0,232
Scaffold_1 684981 . C G 37.0079 PASS DP=13;VDB=0.873285;SGB=-0.511536;RPB=0.594025;MQB=1;MQSB=0.964642;BQB=0.263597;MQ0F=0;AF1=0.5;AC1=1;DP4=6,2,1,2;MQ=60;FQ=40.0156;PV4=0.490909,1,1,0.269554 GT:PL 0/1:67,0,189
Scaffold_1 691278 . A G 15.1417 PASS DP=19;VDB=0.206745;SGB=-0.556411;RPB=0.767432;MQB=0.0528036;MQSB=0.642857;BQB=0.935966;MQ0F=0;AF1=0.499992;AC1=1;DP4=10,2,4,0;MQ=52;FQ=18.0829;PV4=1,0.365513,0.00216773,1 GT:PL 0/1:45,0,235
Scaffold_1 691286 . G A 34.0087 PASS DP=18;VDB=0.434784;SGB=-0.616816;RPB=0.833753;MQB=0.00408677;MQSB=0.6;BQB=0.425907;MQ0F=0;AF1=0.5;AC1=1;DP4=9,2,6,0;MQ=51;FQ=37.016;PV4=0.514706,0.0984115,9.74258e-07,0.199751 GT:PL 0/1:64,0,235
Scaffold_1 691351 . G A 33.0091 PASS DP=14;VDB=0.172729;SGB=-0.511536;RPB=0.263597;MQB=0.0497871;MQSB=0.666667;BQB=0.994805;MQ0F=0;AF1=0.5;AC1=1;DP4=6,2,3,0;MQ=55;FQ=36.0162;PV4=1,1,0,1 GT:PL 0/1:63,0,185
Scaffold_1 691369 . A G 15.1417 PASS DP=12;VDB=0.32;SGB=-0.453602;RPB=0.857143;MQB=0;MQSB=1;BQB=0.714286;MQ0F=0;AF1=0.499992;AC1=1;DP4=6,1,2,0;MQ=56;FQ=18.0829;PV4=1,1,0,1 GT:PL 0/1:45,0,154
Scaffold_1 691405 . C T 14.176 PASS DP=10;VDB=0.14;SGB=-0.453602;RPB=0.5;MQB=0.5;MQSB=1;BQB=0.75;MQ0F=0;AF1=0.49999;AC1=1;DP4=7,1,2,0;MQ=50;FQ=17.1004;PV4=1,1,0.34443,1 GT:PL 0/1:44,0,141
Scaffold_1 691543 . T G 76.0075 PASS DP=16;VDB=0.83311;SGB=-0.651104;RPB=0.9945;MQB=0.013253;MQSB=0.749585;BQB=0.763211;MQ0F=0;AF1=0.5;AC1=1;DP4=4,4,2,6;MQ=48;FQ=79.0156;PV4=0.608392,0.211276,8.23248e-05,1 GT:PL 0/1:106,0,194
Scaffold_1 691550 . G T 73.0074 PASS DP=14;VDB=0.19611;SGB=-0.616816;RPB=0.813189;MQB=0.0508243;MQSB=0.94394;BQB=0.11859;MQ0F=0;AF1=0.5;AC1=1;DP4=2,4,2,4;MQ=49;FQ=75.9812;PV4=1,1,0.00235994,1 GT:PL 0/1:103,0,124
Scaffold_1 691553 . G A 64.0073 PASS DP=15;VDB=0.306246;SGB=-0.636426;RPB=0.148617;MQB=0.0857407;MQSB=0.991701;BQB=0.360111;MQ0F=0;AF1=0.5;AC1=1;DP4=4,3,2,5;MQ=51;FQ=67.0155;PV4=0.592075,0.0302947,0.00435264,1 GT:PL 0/1:94,0,192
Scaffold_1 691568 . T A 60.0073 PASS DP=15;VDB=0.761128;SGB=-0.590765;RPB=0.584657;MQB=0.935451;MQSB=0.838008;BQB=0.95494;MQ0F=0;AF1=0.5;AC1=1;DP4=5,2,0,5;MQ=52;FQ=63.0154;PV4=0.0277778,0.302035,0.454233,1 GT:PL 0/1:90,0,173
Scaffold_1 691681 . T G 11.3381 PASS DP=14;VDB=0.327477;SGB=-0.511536;RPB=0.230693;MQB=0.782349;MQSB=1;BQB=1;MQ0F=0;AF1=0.49998;AC1=1;DP4=0,11,1,2;MQ=56;FQ=14.1838;PV4=0.214286,1,0.0778643,0.0727316 GT:PL 0/1:41,0,173
Scaffold_1 706038 . T C 16.1143 PASS DP=10;VDB=0.02;SGB=-0.453602;RPB=0;MQB=1;MQSB=1;BQB=0.75;MQ0F=0;AF1=0.499994;AC1=1;DP4=7,1,2,0;MQ=60;FQ=19.069;PV4=1,1,1,0.0404623 GT:PL 0/1:46,0,182
Scaffold_1 706870 . A G 11.3381 PASS DP=7;VDB=0.1;SGB=-0.453602;RPB=0;MQB=0;MQSB=0.25;BQB=0.75;MQ0F=0;AF1=0.49998;AC1=1;DP4=2,2,2,0;MQ=50;FQ=14.1838;PV4=0.466667,1,0.0087075,1 GT:PL 0/1:41,0,117
Scaffold_1 707072 . C T 24.0241 PASS DP=10;VDB=0.275636;SGB=-0.511536;RPB=0.577865;MQB=0.115573;MQSB=0.89338;BQB=0.577865;MQ0F=0;AF1=0.499999;AC1=1;DP4=3,3,1,2;MQ=52;FQ=27.0236;PV4=1,0.133448,1.59698e-05,1 GT:PL 0/1:54,0,184
Scaffold_1 707198 . C T 11.3381 PASS DP=20;VDB=0.497461;SGB=-0.556411;RPB=0.235746;MQB=0.011109;MQSB=0.339596;BQB=0.278037;MQ0F=0;AF1=0.49998;AC1=1;DP4=6,9,4,0;MQ=55;FQ=14.1838;PV4=0.0866873,1,1.54173e-07,0.107754 GT:PL 0/1:41,0,255
Scaffold_1 707204 . G A 11.3381 PASS DP=19;VDB=0.497461;SGB=-0.556411;RPB=0.375311;MQB=0.011109;MQSB=0.339596;BQB=0.988813;MQ0F=0;AF1=0.49998;AC1=1;DP4=6,9,4,0;MQ=55;FQ=14.1838;PV4=0.0866873,1,1.54173e-07,0.120149 GT:PL 0/1:41,0,255
Scaffold_1 707236 . G C 13.2188 PASS DP=19;VDB=0.0587288;SGB=-0.556411;RPB=0.0439369;MQB=0.0340475;MQSB=0.140347;BQB=0.486752;MQ0F=0;AF1=0.499987;AC1=1;DP4=7,8,4,0;MQ=53;FQ=16.1222;PV4=0.103199,1,0.000298757,1 GT:PL 0/1:43,0,255
Scaffold_1 707248 . T C 51.0072 PASS DP=18;VDB=0.236588;SGB=-0.616816;RPB=0.423311;MQB=0.00339922;MQSB=0.102932;BQB=0.806612;MQ0F=0;AF1=0.5;AC1=1;DP4=4,8,6,0;MQ=52;FQ=54.0154;PV4=0.0128205,0.451079,4.99058e-07,1 GT:PL 0/1:81,0,250
Scaffold_1 707259 . G T 17.0924 PASS DP=17;VDB=0.0270423;SGB=-0.590765;RPB=0.66939;MQB=0.00673795;MQSB=0.232624;BQB=0.965874;MQ0F=0;AF1=0.499995;AC1=1;DP4=5,7,5,0;MQ=53;FQ=20.058;PV4=0.0441176,1,2.85622e-06,1 GT:PL 0/1:47,0,255
Scaffold_1 707261 . A C 16.1143 PASS DP=17;VDB=0.0284856;SGB=-0.590765;RPB=0.697005;MQB=0.00780539;MQSB=0.266194;BQB=0.960687;MQ0F=0;AF1=0.499994;AC1=1;DP4=5,6,5,0;MQ=53;FQ=19.069;PV4=0.0934066,0.185121,6.89134e-06,1 GT:PL 0/1:46,0,252
Scaffold_1 707268 . T A 18.0749 PASS DP=17;VDB=0.0516381;SGB=-0.556411;RPB=0.594978;MQB=0.0181986;MQSB=0.232624;BQB=0.823732;MQ0F=0;AF1=0.499996;AC1=1;DP4=6,7,4,0;MQ=53;FQ=21.0492;PV4=0.102941,1,1.27022e-05,1 GT:PL 0/1:48,0,255
Scaffold_1 707275 . C T 21.0411 PASS DP=17;VDB=0.0483573;SGB=-0.556411;RPB=0.697471;MQB=0.0204514;MQSB=0.17984;BQB=0.998163;MQ0F=0;AF1=0.499998;AC1=1;DP4=5,7,4,0;MQ=53;FQ=24.0321;PV4=0.0884615,0.43321,2.74217e-05,1 GT:PL 0/1:51,0,255
Scaffold_1 707296 . A G 40.0075 PASS DP=15;VDB=0.0356013;SGB=-0.556411;RPB=0.878264;MQB=0.0249144;MQSB=0.253351;BQB=0.98568;MQ0F=0;AF1=0.5;AC1=1;DP4=3,5,4,0;MQ=53;FQ=43.0154;PV4=0.0808081,1,0.000412026,1 GT:PL 0/1:70,0,188
Scaffold_1 707297 . A C 49.0072 PASS DP=15;VDB=0.0230738;SGB=-0.590765;RPB=0.976181;MQB=0.0137638;MQSB=0.187475;BQB=0.84246;MQ0F=0;AF1=0.5;AC1=1;DP4=3,5,5,0;MQ=51;FQ=52.0153;PV4=0.0753691,1,9.89566e-05,1 GT:PL 0/1:79,0,181
Scaffold_1 707298 . A T 26.0177 PASS DP=14;VDB=0.0516381;SGB=-0.556411;RPB=0.988166;MQB=0.0320494;MQSB=0.304076;BQB=0.928296;MQ0F=0;AF1=0.499999;AC1=1;DP4=5,4,4,0;MQ=51;FQ=29.0205;PV4=0.227972,1,0.000281283,1 GT:PL 0/1:56,0,206
Scaffold_1 707322 . G A 54.0072 PASS DP=13;VDB=0.0218651;SGB=-0.590765;RPB=0.331306;MQB=0.0194886;MQSB=0.236382;BQB=0.506703;MQ0F=0;AF1=0.5;AC1=1;DP4=3,4,5,0;MQ=50;FQ=57.0154;PV4=0.0808081,1,0.000243039,0.1482 GT:PL 0/1:84,0,158
Scaffold_1 707326 . G C 45.0072 PASS DP=14;VDB=0.0207102;SGB=-0.590765;RPB=0.331306;MQB=0.0194886;MQSB=0.236382;BQB=0.838008;MQ0F=0;AF1=0.5;AC1=1;DP4=3,4,5,0;MQ=50;FQ=48.0153;PV4=0.0808081,0.313315,0.000243039,0.470372 GT:PL 0/1:75,0,170
Scaffold_1 707465 . C T 11.3381 PASS DP=15;VDB=0.327477;SGB=-0.511536;RPB=0.996974;MQB=0.0368832;MQSB=0.99115;BQB=0.952672;MQ0F=0;AF1=0.49998;AC1=1;DP4=4,7,1,2;MQ=55;FQ=14.1838;PV4=1,1,3.66384e-05,1 GT:PL 0/1:41,0,255
Scaffold_1 707535 . T C 11.3381 PASS DP=13;VDB=0.22;SGB=-0.453602;RPB=0.727273;MQB=0;MQSB=0.976181;BQB=0.545455;MQ0F=0;AF1=0.49998;AC1=1;DP4=4,7,1,1;MQ=57;FQ=14.1838;PV4=1,1,0,1 GT:PL 0/1:41,0,250
Scaffold_1 707536 . A T 11.3381 PASS DP=13;VDB=0.22;SGB=-0.453602;RPB=0.8;MQB=0;MQSB=0.935451;BQB=1;MQ0F=0;AF1=0.49998;AC1=1;DP4=4,6,1,1;MQ=57;FQ=14.1838;PV4=1,1,0,1 GT:PL 0/1:41,0,236
Scaffold_1 707560 . A T 63.0073 PASS DP=16;VDB=0.986825;SGB=-0.556411;RPB=0.991513;MQB=0.0161635;MQSB=0.868815;BQB=0.658617;MQ0F=0;AF1=0.5;AC1=1;DP4=5,6,1,3;MQ=55;FQ=66.0155;PV4=0.604396,1,0,0.274895 GT:PL 0/1:93,0,251
Scaffold_1 707632 . G A 56.0072 PASS DP=12;VDB=0.191063;SGB=-0.590765;RPB=0.896474;MQB=0.0194886;MQSB=0.382304;BQB=0.896474;MQ0F=0;AF1=0.5;AC1=1;DP4=3,4,0,5;MQ=50;FQ=59.0154;PV4=0.204545,1,0.000243039,1 GT:PL 0/1:86,0,190
Scaffold_1 714215 . G A 36.0081 PASS DP=14;VDB=0.00835905;SGB=-0.556411;RPB=0.0773047;MQB=0.0183156;MQSB=0.194346;BQB=1;MQ0F=0;AF1=0.5;AC1=1;DP4=3,7,4,0;MQ=54;FQ=39.0157;PV4=0.0699301,1,1.0156e-08,0.115759 GT:PL 0/1:66,0,248
Scaffold_1 714250 . A G 46.0072 PASS DP=10;VDB=0.00835905;SGB=-0.556411;RPB=0.279932;MQB=0.0559863;MQSB=0.366593;BQB=0.895781;MQ0F=0;AF1=0.5;AC1=1;DP4=3,3,4,0;MQ=51;FQ=49.0153;PV4=0.2,1,5.31283e-06,1 GT:PL 0/1:76,0,177
Scaffold_1 714263 . T C 44.0073 PASS DP=11;VDB=0.00835905;SGB=-0.556411;RPB=0.562708;MQB=0.0401934;MQSB=0.472367;BQB=0.562708;MQ0F=0;AF1=0.5;AC1=1;DP4=4,3,4,0;MQ=52;FQ=47.0153;PV4=0.236364,1,1.10023e-06,1 GT:PL 0/1:74,0,190
Scaffold_1 714284 . C T 69.0074 PASS DP=9;VDB=0.233642;SGB=-0.590765;RPB=0.89338;MQB=0.0812164;MQSB=0.285714;BQB=0.89338;MQ0F=0;AF1=0.5;AC1=1;DP4=2,2,5,0;MQ=47;FQ=71.9882;PV4=0.166667,0.342264,9.52632e-05,1 GT:PL 0/1:99,0,121
Scaffold_1 714287 . A C 74.0075 PASS DP=8;VDB=0.233642;SGB=-0.590765;RPB=0.900802;MQB=0.150134;MQSB=1;BQB=0.300267;MQ0F=0;AF1=0.5;AC1=1;DP4=2,1,5,0;MQ=46;FQ=46.0119;PV4=0.375,1,0.000460176,0.240809 GT:PL 0/1:104,0,73
Scaffold_1 714291 . G C 71.0074 PASS DP=8;VDB=0.233642;SGB=-0.590765;RPB=0.900802;MQB=0.150134;MQSB=1;BQB=0.900802;MQ0F=0;AF1=0.5;AC1=1;DP4=2,1,5,0;MQ=46;FQ=61.7497;PV4=0.375,1,0.000460176,0.240809 GT:PL 0/1:101,0,89
Scaffold_1 714307 . C T 70.0074 PASS DP=10;VDB=0.24773;SGB=-0.590765;RPB=0.523791;MQB=0.0476173;MQSB=0.375;BQB=0.857112;MQ0F=0;AF1=0.5;AC1=1;DP4=3,2,5,0;MQ=49;FQ=73.0155;PV4=0.444444,0.173297,2.04741e-05,1 GT:PL 0/1:100,0,151
Scaffold_1 714322 . G A 65.0073 PASS DP=12;VDB=0.233642;SGB=-0.590765;RPB=0.253351;MQB=0.0194886;MQSB=0.382304;BQB=0.253351;MQ0F=0;AF1=0.5;AC1=1;DP4=4,3,5,0;MQ=51;FQ=68.0155;PV4=0.204545,1,1.00418e-06,1 GT:PL 0/1:95,0,167
Scaffold_1 714496 . C T 35.0083 PASS DP=16;VDB=0.509904;SGB=-0.511536;RPB=0.643969;MQB=0.0342181;MQSB=0.581657;BQB=0.989637;MQ0F=0;AF1=0.5;AC1=1;DP4=9,3,1,2;MQ=57;FQ=38.0158;PV4=0.241758,1,2.2263e-08,0.285147 GT:PL 0/1:65,0,251
Scaffold_1 714502 . T A 73.0074 PASS DP=15;VDB=0.303109;SGB=-0.556411;RPB=0.928296;MQB=0.114218;MQSB=0.635922;BQB=0.953497;MQ0F=0;AF1=0.5;AC1=1;DP4=7,2,1,3;MQ=56;FQ=76.0156;PV4=0.216783,1,0.000811234,0.137089 GT:PL 0/1:103,0,211
Scaffold_1 714505 . G A 64.0073 PASS DP=15;VDB=0.303109;SGB=-0.556411;RPB=0.697617;MQB=0.0982429;MQSB=0.581657;BQB=0.426445;MQ0F=0;AF1=0.5;AC1=1;DP4=9,2,1,3;MQ=57;FQ=67.0155;PV4=0.0769231,1,0.000231073,0.0760851 GT:PL 0/1:94,0,212
Scaffold_1 714509 . G A 61.0073 PASS DP=15;VDB=0.292086;SGB=-0.556411;RPB=0.697617;MQB=0.0982429;MQSB=0.581657;BQB=0.872525;MQ0F=0;AF1=0.5;AC1=1;DP4=9,2,1,3;MQ=57;FQ=64.0155;PV4=0.0769231,1,0.000231073,1 GT:PL 0/1:91,0,217
Scaffold_1 714510 . C T 61.0073 PASS DP=15;VDB=0.292086;SGB=-0.556411;RPB=0.735784;MQB=0.0982429;MQSB=0.581657;BQB=0.966484;MQ0F=0;AF1=0.5;AC1=1;DP4=9,2,1,3;MQ=57;FQ=64.0155;PV4=0.0769231,1,0.000231073,1 GT:PL 0/1:91,0,222
Scaffold_1 714553 . C T 135.008 PASS DP=16;VDB=0.707785;SGB=-0.636426;RPB=0.667136;MQB=0.0168394;MQSB=0.943882;BQB=0.360231;MQ0F=0;AF1=0.5;AC1=1;DP4=7,2,4,3;MQ=53;FQ=138.016;PV4=0.596154,0.0145637,0.000277346,0.417117 GT:PL 0/1:165,0,211
Scaffold_1 714561 . C T 116.008 PASS DP=15;VDB=0.358309;SGB=-0.616816;RPB=0.118442;MQB=0.035674;MQSB=0.996974;BQB=0.84472;MQ0F=0;AF1=0.5;AC1=1;DP4=7,1,4,2;MQ=53;FQ=119.009;PV4=0.538462,1,0.00135586,1 GT:PL 0/1:146,0,174
Scaffold_1 714566 . T C 113.008 PASS DP=16;VDB=0.361542;SGB=-0.616816;RPB=0.711573;MQB=0.0297292;MQSB=0.981007;BQB=0.367879;MQ0F=0;AF1=0.5;AC1=1;DP4=7,2,4,2;MQ=54;FQ=116.016;PV4=1,1,0.000738932,1 GT:PL 0/1:143,0,196
Scaffold_1 714567 . G A 111.008 PASS DP=16;VDB=0.361542;SGB=-0.616816;RPB=0.555306;MQB=0.0253122;MQSB=0.992674;BQB=0.266194;MQ0F=0;AF1=0.5;AC1=1;DP4=8,2,4,2;MQ=54;FQ=114.016;PV4=0.604396,1,0.000404487,1 GT:PL 0/1:141,0,207
Scaffold_1 714572 . T G 101.008 PASS DP=16;VDB=0.374572;SGB=-0.616816;RPB=0.555306;MQB=0.0253122;MQSB=0.992674;BQB=0.863243;MQ0F=0;AF1=0.5;AC1=1;DP4=8,2,4,2;MQ=54;FQ=104.016;PV4=0.604396,1,0.000404487,1 GT:PL 0/1:131,0,207
Scaffold_1 714605 . A C 52.0072 PASS DP=11;VDB=0.0483573;SGB=-0.556411;RPB=0.924449;MQB=0.0401934;MQSB=0.924449;BQB=0.924449;MQ0F=0;AF1=0.5;AC1=1;DP4=4,3,3,1;MQ=52;FQ=55.0154;PV4=1,1,0.000109921,1 GT:PL 0/1:82,0,179
Scaffold_1 714612 . T C 46.0072 PASS DP=11;VDB=0.131948;SGB=-0.511536;RPB=0.809011;MQB=0.115573;MQSB=0.89338;BQB=0.809011;MQ0F=0;AF1=0.5;AC1=1;DP4=3,3,2,1;MQ=54;FQ=49.0153;PV4=1,0.366899,2.15988e-12,1 GT:PL 0/1:76,0,169
Scaffold_1 714614 . G C 64.0073 PASS DP=10;VDB=0.0483573;SGB=-0.556411;RPB=0.406082;MQB=0.0812164;MQSB=0.730948;BQB=0.487298;MQ0F=0;AF1=0.5;AC1=1;DP4=2,3,3,1;MQ=50;FQ=67.0155;PV4=0.52381,0.0952238,0.000887515,1 GT:PL 0/1:94,0,154
Scaffold_1 714627 . T C 67.0074 PASS DP=9;VDB=0.0516381;SGB=-0.556411;RPB=0.406082;MQB=0.0812164;MQSB=0.730948;BQB=0.487298;MQ0F=0;AF1=0.5;AC1=1;DP4=2,3,3,1;MQ=50;FQ=70.0121;PV4=0.52381,1,0.000887515,1 GT:PL 0/1:97,0,128
Scaffold_1 714642 . A C 29.0123 PASS DP=9;VDB=0.0481133;SGB=-0.511536;RPB=0.115573;MQB=0.115573;MQSB=0.406082;BQB=0.809011;MQ0F=0;AF1=0.5;AC1=1;DP4=2,4,3,0;MQ=53;FQ=32.0178;PV4=0.166667,0.157481,0.000630938,1 GT:PL 0/1:59,0,174
Scaffold_1 714657 . A G 20.0499 PASS DP=9;VDB=0.98;SGB=-0.453602;RPB=1;MQB=0;MQSB=0.900802;BQB=0.5;MQ0F=0;AF1=0.499997;AC1=1;DP4=2,4,1,1;MQ=56;FQ=23.0366;PV4=1,0.409653,0,0.00315023 GT:PL 0/1:50,0,168
Scaffold_1 714669 . G A 18.0749 PASS DP=12;VDB=0.14;SGB=-0.453602;RPB=0.666667;MQB=0;MQSB=0.950952;BQB=0.666667;MQ0F=0;AF1=0.499996;AC1=1;DP4=5,4,1,1;MQ=57;FQ=21.0492;PV4=1,1,9.00605e-07,0.375663 GT:PL 0/1:48,0,228
Scaffold_1 714703 . T A 53.0072 PASS DP=13;VDB=0.0395055;SGB=-0.556411;RPB=0.466776;MQB=0.0211283;MQSB=0.623736;BQB=0.826565;MQ0F=0;AF1=0.5;AC1=1;DP4=5,4,1,3;MQ=54;FQ=56.0154;PV4=0.559441,0.0924996,9.21484e-06,1 GT:PL 0/1:83,0,223
Scaffold_1 714705 . G A 40.0075 PASS DP=13;VDB=0.0422968;SGB=-0.556411;RPB=0.466776;MQB=0.0211283;MQSB=0.623736;BQB=0.236815;MQ0F=0;AF1=0.5;AC1=1;DP4=5,4,1,3;MQ=54;FQ=43.0154;PV4=0.559441,0.0451831,9.21484e-06,1 GT:PL 0/1:70,0,235
Scaffold_1 714728 . T C 50.0072 PASS DP=14;VDB=0.0422968;SGB=-0.556411;RPB=0.960789;MQB=0.0183156;MQSB=0.703221;BQB=0.738968;MQ0F=0;AF1=0.5;AC1=1;DP4=5,5,1,3;MQ=54;FQ=53.0153;PV4=0.58042,0.229205,3.17835e-06,1 GT:PL 0/1:80,0,241
Scaffold_1 714734 . C A 32.0097 PASS DP=15;VDB=0.0422968;SGB=-0.556411;RPB=0.960789;MQB=0.0183156;MQSB=0.703221;BQB=0.161621;MQ0F=0;AF1=0.5;AC1=1;DP4=5,5,1,3;MQ=54;FQ=35.0165;PV4=0.58042,0.00187042,3.17835e-06,1 GT:PL 0/1:62,0,248
Scaffold_1 714748 . G A 58.0073 PASS DP=16;VDB=0.281015;SGB=-0.590765;RPB=0.960687;MQB=0.00780539;MQSB=0.339296;BQB=0.310516;MQ0F=0;AF1=0.5;AC1=1;DP4=7,4,1,4;MQ=54;FQ=61.0154;PV4=0.282051,0.0355269,3.94158e-07,0.333774 GT:PL 0/1:88,0,243
Scaffold_1 714770 . A G 83.0076 PASS DP=20;VDB=0.867547;SGB=-0.616816;RPB=0.542747;MQB=0.00408677;MQSB=0.377804;BQB=0.483225;MQ0F=0;AF1=0.5;AC1=1;DP4=7,4,1,5;MQ=52;FQ=86.0157;PV4=0.131222,1,8.80403e-09,0.313088 GT:PL 0/1:113,0,248
Scaffold_1 714783 . T C 101.008 PASS DP=22;VDB=0.942381;SGB=-0.651104;RPB=1;MQB=0.00105192;MQSB=0.333737;BQB=0.981571;MQ0F=0;AF1=0.5;AC1=1;DP4=7,5,2,6;MQ=51;FQ=104.016;PV4=0.196809,0.437171,2.51484e-09,1 GT:PL 0/1:131,0,253
Scaffold_1 714830 . A G 54.0072 PASS DP=15;VDB=0.0404803;SGB=-0.590765;RPB=0.998127;MQB=0.00920968;MQSB=0.676634;BQB=0.934728;MQ0F=0;AF1=0.5;AC1=1;DP4=5,5,1,4;MQ=52;FQ=57.0154;PV4=0.58042,1,9.40868e-08,1 GT:PL 0/1:84,0,233
Scaffold_1 714841 . A C 50.0072 PASS DP=16;VDB=0.0483573;SGB=-0.556411;RPB=0.997028;MQB=0.0211283;MQSB=0.908075;BQB=0.928296;MQ0F=0;AF1=0.5;AC1=1;DP4=4,5,1,3;MQ=53;FQ=53.0153;PV4=1,1,1.78829e-06,1 GT:PL 0/1:80,0,219
Scaffold_1 714855 . G A 61.0073 PASS DP=16;VDB=0.0525422;SGB=-0.590765;RPB=0.998127;MQB=0.00920968;MQSB=0.676634;BQB=0.76338;MQ0F=0;AF1=0.5;AC1=1;DP4=5,5,1,4;MQ=52;FQ=64.0155;PV4=0.58042,1,9.40868e-08,1 GT:PL 0/1:91,0,233
Scaffold_1 714870 . A T 24.0241 PASS DP=15;VDB=0.137328;SGB=-0.511536;RPB=0.944459;MQB=0.040184;MQSB=0.651439;BQB=0.447727;MQ0F=0;AF1=0.499999;AC1=1;DP4=4,6,0,3;MQ=55;FQ=27.0236;PV4=0.496504,1,3.94718e-06,1 GT:PL 0/1:54,0,219
Scaffold_1 715306 . C A 16.1143 PASS DP=11;VDB=0.02;SGB=-0.453602;RPB=0.25;MQB=1;MQSB=1.00775;BQB=0.75;MQ0F=0;AF1=0.499994;AC1=1;DP4=2,6,2,0;MQ=60;FQ=19.069;PV4=0.133333,1,1,1 GT:PL 0/1:46,0,206
Scaffold_1 715366 . A G 39.0076 PASS DP=14;VDB=0.0320192;SGB=-0.556411;RPB=0.0773047;MQB=0.0183156;MQSB=0.83527;BQB=0.939413;MQ0F=0;AF1=0.5;AC1=1;DP4=6,4,3,1;MQ=53;FQ=42.0155;PV4=1,1,4.92278e-10,0.0369245 GT:PL 0/1:69,0,247
Scaffold_1 715722 . C A 16.1143 PASS DP=11;VDB=0.02;SGB=-0.453602;RPB=0.571429;MQB=0.714286;MQSB=1;BQB=1;MQ0F=0;AF1=0.499994;AC1=1;DP4=1,6,0,2;MQ=53;FQ=19.069;PV4=1,1,1,0.449552 GT:PL 0/1:46,0,141
Scaffold_1 722448 . A G 49.9722 PASS DP=4;VDB=0.411594;SGB=-0.511536;MQ0F=0;AF1=1;AC1=2;DP4=0,0,0,3;MQ=60;FQ=-35.9869 GT:PL 1/1:82,9,0
Scaffold_1 731065 . G T 13.2188 PASS DP=12;VDB=0.02;SGB=-0.453602;RPB=0.666667;MQB=1;MQSB=0.950952;BQB=1;MQ0F=0;AF1=0.499987;AC1=1;DP4=6,3,0,2;MQ=60;FQ=16.1222;PV4=0.181818,0.372252,1,1 GT:PL 0/1:43,0,248
Scaffold_1 742368 . C A 52.0072 PASS DP=8;VDB=0.0221621;SGB=-0.511536;RPB=0.450401;MQB=0.600535;MQSB=0.583333;BQB=0.600535;MQ0F=0;AF1=0.5;AC1=1;DP4=2,3,0,3;MQ=54;FQ=55.0153;PV4=0.464286,1,0.111452,0.405303 GT:PL 0/1:82,0,134
Scaffold_1 742804 . C T 19.061 PASS DP=5;VDB=0.02;SGB=-0.453602;RPB=1;MQB=0.666667;MQSB=0.666667;BQB=0.666667;MQ0F=0;AF1=0.499997;AC1=1;DP4=0,3,2,0;MQ=54;FQ=21.7123;PV4=0.1,0.189109,1,1 GT:PL 0/1:49,0,60
Scaffold_1 745622 . T C 13.2188 PASS DP=12;VDB=0.11189;SGB=-0.511536;RPB=0.716531;MQB=0.0497871;MQSB=0.950952;BQB=0.877913;MQ0F=0;AF1=0.499987;AC1=1;DP4=4,4,2,1;MQ=53;FQ=16.1222;PV4=1,1,8.95784e-07,1 GT:PL 0/1:43,0,210
Scaffold_1 747516 . T C 14.176 PASS DP=14;VDB=0.568985;SGB=-0.511536;RPB=0.996435;MQB=0.985816;MQSB=0.899815;BQB=0.597928;MQ0F=0.285714;AF1=0.49999;AC1=1;DP4=5,5,2,1;MQ=41;FQ=17.1004;PV4=1,1,0.44327,1 GT:PL 0/1:44,0,155
Scaffold_1 747543 . T C 28.0137 PASS DP=16;VDB=0.757606;SGB=-0.590765;RPB=0.912219;MQB=0.728422;MQSB=0.322486;BQB=0.403532;MQ0F=0.25;AF1=0.5;AC1=1;DP4=6,4,2,3;MQ=36;FQ=31.0185;PV4=0.608392,1,0.208501,1 GT:PL 0/1:58,0,150
Scaffold_1 750334 . G T 17.0924 PASS DP=8;VDB=0.02;SGB=-0.453602;RPB=0.4;MQB=1;MQSB=1.01283;BQB=1;MQ0F=0;AF1=0.499995;AC1=1;DP4=3,2,0,2;MQ=60;FQ=20.058;PV4=0.428571,1,1,1 GT:PL 0/1:47,0,136
Scaffold_1 778712 . C A 12.272 PASS DP=6;VDB=0.02;SGB=-0.453602;RPB=1;MQB=1;MQSB=1;BQB=0.75;MQ0F=0;AF1=0.499984;AC1=1;DP4=3,1,2,0;MQ=60;FQ=15.1496;PV4=1,0.274331,1,1 GT:PL 0/1:42,0,111
Scaffold_1 786986 . G A 16.1143 PASS DP=9;VDB=0.02;SGB=-0.453602;RPB=0.285714;MQB=1;MQSB=0.924584;BQB=0.857143;MQ0F=0;AF1=0.499994;AC1=1;DP4=3,4,0,2;MQ=60;FQ=19.069;PV4=0.5,0.479828,1,1 GT:PL 0/1:46,0,197
Scaffold_1 796343 . G T 11.3381 PASS DP=11;VDB=0.06;SGB=-0.453602;RPB=0.111111;MQB=0;MQSB=0.777778;BQB=0.777778;MQ0F=0;AF1=0.49998;AC1=1;DP4=7,2,2,0;MQ=57;FQ=14.1838;PV4=1,1,0,0.00450461 GT:PL 0/1:41,0,213
Scaffold_1 797374 . C G 56.0072 PASS DP=16;VDB=0.0414745;SGB=-0.590765;RPB=0.281535;MQB=0.00920968;MQSB=0.128634;BQB=0.370881;MQ0F=0;AF1=0.5;AC1=1;DP4=3,7,5,0;MQ=54;FQ=59.0154;PV4=0.025641,1,0.000432628,1 GT:PL 0/1:86,0,208
Scaffold_1 797466 . A G 32.0097 PASS DP=5;VDB=0.44;SGB=-0.453602;RPB=0.333333;MQB=0;MQSB=1;BQB=0.5;MQ0F=0;AF1=0.5;AC1=1;DP4=0,3,1,1;MQ=52;FQ=35.0078;PV4=0.4,0.136114,0.00015356,1 GT:PL 0/1:62,0,89
Scaffold_1 800637 . A T 112.514 PASS DP=8;VDB=0.522837;SGB=-0.556411;MQSB=0;MQ0F=0;AF1=1;AC1=2;DP4=0,0,2,2;MQ=49;FQ=-38.9864 GT:PL 1/1:145,12,0
Scaffold_1 800638 . T C 124.019 PASS DP=8;VDB=0.557348;SGB=-0.590765;RPB=1;MQB=1;MQSB=0.625;BQB=1;MQ0F=0;AF1=0.501256;AC1=1;DP4=0,1,2,3;MQ=53;FQ=-5.445;PV4=1,0.270735,0.181213,0.337959 GT:PL 0/1:154,0,23
Scaffold_1 800639 . C A 136.022 PASS DP=8;VDB=0.660869;SGB=-0.616816;RPB=0.583333;MQB=0.166667;MQSB=0.900802;BQB=0.25;MQ0F=0;AF1=0.501582;AC1=1;DP4=0,2,3,3;MQ=54;FQ=-6.18227;PV4=0.464286,1,0.0968007,1 GT:PL 0/1:166,0,22
Scaffold_1 801557 . G T 13.2188 PASS DP=13;VDB=0.02;SGB=-0.453602;RPB=0.444444;MQB=1;MQSB=0.950952;BQB=0.444444;MQ0F=0;AF1=0.499987;AC1=1;DP4=3,6,2,0;MQ=60;FQ=16.1222;PV4=0.181818,1,1,1 GT:PL 0/1:43,0,217
Scaffold_1 810930 . T C 23.0285 PASS DP=6;VDB=0.22;SGB=-0.453602;RPB=0;MQB=0;MQSB=0.5;BQB=0.5;MQ0F=0;AF1=0.499999;AC1=1;DP4=2,2,2,0;MQ=54;FQ=26.0258;PV4=0.466667,1,0.0022116,1 GT:PL 0/1:53,0,117
Scaffold_1 810932 . G A 23.0285 PASS DP=6;VDB=0.22;SGB=-0.453602;RPB=0;MQB=0;MQSB=0.5;BQB=0.875;MQ0F=0;AF1=0.499999;AC1=1;DP4=2,2,2,0;MQ=54;FQ=26.0258;PV4=0.466667,1,0.0022116,1 GT:PL 0/1:53,0,117
Scaffold_1 810939 . C G 23.0285 PASS DP=7;VDB=0.22;SGB=-0.453602;RPB=0.5;MQB=0;MQSB=0.5;BQB=0.5;MQ0F=0;AF1=0.499999;AC1=1;DP4=2,2,2,0;MQ=54;FQ=26.0258;PV4=0.466667,1,0.0022116,1 GT:PL 0/1:53,0,122
Scaffold_1 810950 . A G 23.0285 PASS DP=6;VDB=0.22;SGB=-0.453602;RPB=0.5;MQB=0;MQSB=0.28717;BQB=0.5;MQ0F=0;AF1=0.499999;AC1=1;DP4=1,3,2,0;MQ=54;FQ=26.0258;PV4=0.4,1,0.0022116,1 GT:PL 0/1:53,0,121
Scaffold_1 810990 . A G 10.42 PASS DP=9;VDB=0.22;SGB=-0.453602;RPB=0.571429;MQB=0;MQSB=0.346719;BQB=0.857143;MQ0F=0;AF1=0.499975;AC1=1;DP4=1,6,2,0;MQ=56;FQ=13.2265;PV4=0.0833333,1,3.67702e-05,1 GT:PL 0/1:40,0,163
Scaffold_1 810995 . T A 17.0924 PASS DP=8;VDB=0.22;SGB=-0.453602;RPB=0.333333;MQB=0;MQSB=0.300267;BQB=0.833333;MQ0F=0;AF1=0.499995;AC1=1;DP4=1,5,2,0;MQ=56;FQ=20.058;PV4=0.107143,1,0.000143063,1 GT:PL 0/1:47,0,151
Scaffold_1 820102 . A G 123.013 PASS DP=28;VDB=0.000594185;SGB=-0.662043;RPB=0.423112;MQB=0.826565;MQSB=1;BQB=0.236815;MQ0F=0.107143;AF1=1;AC1=2;DP4=4,0,8,1;MQ=31;FQ=-29.9901;PV4=1,1,1,0.11808 GT:PL 1/1:153,3,0
Scaffold_1 820361 . A G 93.0077 PASS DP=69;VDB=0.018298;SGB=-0.691153;RPB=0.910334;MQB=0.678921;MQSB=0.810445;BQB=0.678921;MQ0F=0.289855;AF1=0.5;AC1=1;DP4=13,10,11,7;MQ=24;FQ=96.0159;PV4=1,0.243211,0.285687,1 GT:PL 0/1:123,0,184
Scaffold_1 820601 . G C 12.2746 PASS DP=6;VDB=0.06;SGB=-0.453602;RPB=0.125;MQB=0.25;BQB=0.875;MQ0F=0.166667;AF1=0.500299;AC1=1;DP4=0,4,0,2;MQ=23;FQ=4.00431;PV4=1,0.395157,1,1 GT:PL 0/1:42,0,29
Scaffold_1 820622 . C G 24.0292 PASS DP=3;VDB=0.02;SGB=-0.453602;RPB=1;MQB=1;BQB=1;MQ0F=0;AF1=1;AC1=2;DP4=0,1,0,2;MQ=27;FQ=-29.9901;PV4=1,1,1,1 GT:PL 1/1:54,3,0
Scaffold_1 820623 . C T 24.0292 PASS DP=3;VDB=0.02;SGB=-0.453602;RPB=1;MQB=1;BQB=1;MQ0F=0;AF1=1;AC1=2;DP4=0,1,0,2;MQ=27;FQ=-29.9901;PV4=1,0.333333,1,1 GT:PL 1/1:54,3,0
Scaffold_1 820849 . G A 39.0076 PASS DP=31;VDB=0.000105565;SGB=-0.676189;RPB=0.805909;MQB=0.761015;MQSB=0.144493;BQB=0.195564;MQ0F=0.290323;AF1=0.500002;AC1=1;DP4=9,5,9,2;MQ=17;FQ=23.9641;PV4=0.406522,0.0286044,1,1 GT:PL 0/1:69,0,51
Scaffold_1 820986 . C A 146.013 PASS DP=42;VDB=2.15741e-09;SGB=-0.691153;RPB=0.275287;MQB=0.0925878;MQSB=0.91386;BQB=0.971673;MQ0F=0.238095;AF1=0.500499;AC1=1;DP4=9,1,12,6;MQ=26;FQ=3.01767;PV4=0.364244,0.352006,1,0.0220691 GT:PL 0/1:176,0,27
Scaffold_1 821027 . G A 150.008 PASS DP=271;VDB=6.05779e-13;SGB=-0.693147;RPB=0.84725;MQB=0.905118;MQSB=0.901775;BQB=0.317;MQ0F=0.151292;AF1=0.5;AC1=1;DP4=73,36,34,12;MQ=31;FQ=153.017;PV4=0.450377,0.118625,0.31459,1 GT:PL 0/1:180,0,255
Scaffold_1 821028 . C G 196.009 PASS DP=277;VDB=1.31551e-21;SGB=-0.693147;RPB=0.916362;MQB=0.781237;MQSB=0.999398;BQB=0.0347899;MQ0F=0.158845;AF1=0.5;AC1=1;DP4=69,31,42,15;MQ=32;FQ=199.012;PV4=0.587709,0.00599427,1,1 GT:PL 0/1:226,0,255
Scaffold_1 821031 . A G 209.009 PASS DP=295;VDB=3.95012e-10;SGB=-0.693147;RPB=0.382762;MQB=0.00729942;MQSB=0.568381;BQB=0.0150465;MQ0F=0.169492;AF1=0.5;AC1=1;DP4=87,34,29,16;MQ=31;FQ=211.91;PV4=0.349562,0.000501286,1,0.0463884 GT:PL 0/1:239,0,255
Scaffold_1 821036 . T C 58.0073 PASS DP=304;VDB=5.65192e-11;SGB=-0.693141;RPB=0.984578;MQB=0.93206;MQSB=0.663013;BQB=0.0150971;MQ0F=0.167763;AF1=0.5;AC1=1;DP4=92,42,27,10;MQ=31;FQ=61.0154;PV4=0.689694,0.00434265,0.310431,1 GT:PL 0/1:88,0,255
Scaffold_1 821040 . A T 225.009 PASS DP=311;VDB=3.2137e-16;SGB=-0.693147;RPB=0.628239;MQB=0.0302713;MQSB=0.975647;BQB=0.0127346;MQ0F=0.163987;AF1=0.5;AC1=1;DP4=78,25,44,24;MQ=31;FQ=225.007;PV4=0.124396,0.000291423,1,0.135939 GT:PL 0/1:255,0,255
Scaffold_1 821051 . T C 182.009 PASS DP=336;VDB=2.50497e-20;SGB=-0.693147;RPB=0.822607;MQB=0.620568;MQSB=0.94933;BQB=0.0703391;MQ0F=0.175595;AF1=0.5;AC1=1;DP4=91,34,43,14;MQ=31;FQ=185.017;PV4=0.856261,0.0182098,0.164924,1 GT:PL 0/1:212,0,255
Scaffold_1 821053 . C T 225.009 PASS DP=337;VDB=7.01376e-15;SGB=-0.693147;RPB=0.280145;MQB=0.0613196;MQSB=0.51502;BQB=0.944556;MQ0F=0.175074;AF1=0.5;AC1=1;DP4=72,21,68,22;MQ=31;FQ=225.007;PV4=0.861902,0.157542,1,0.216943 GT:PL 0/1:255,0,255
Scaffold_1 821054 . A C 198.009 PASS DP=344;VDB=3.93156e-08;SGB=-0.693147;RPB=0.363602;MQB=0.00243584;MQSB=0.9961;BQB=0.00420666;MQ0F=0.177326;AF1=0.5;AC1=1;DP4=103,31,32,16;MQ=30;FQ=201.009;PV4=0.181578,0.000266876,1,1 GT:PL 0/1:228,0,255
Scaffold_1 821060 . A C 225.009 PASS DP=373;VDB=2.89115e-17;SGB=-0.693147;RPB=0.020264;MQB=0.350735;MQSB=0.898723;BQB=0.365041;MQ0F=0.187668;AF1=0.5;AC1=1;DP4=87,28,58,24;MQ=30;FQ=225.007;PV4=0.512435,0.0889852,0.0653573,1 GT:PL 0/1:255,0,255
Scaffold_1 821068 . G A 225.009 PASS DP=395;VDB=6.57183e-23;SGB=-0.693147;RPB=0.781222;MQB=0.277278;MQSB=0.979836;BQB=0.00613006;MQ0F=0.207595;AF1=0.5;AC1=1;DP4=25,14,129,47;MQ=30;FQ=48.0153;PV4=0.246648,1,0.0241386,1 GT:PL 0/1:255,0,75
Scaffold_1 821149 . T C 25.0205 PASS DP=99;VDB=0.000877404;SGB=-0.688148;RPB=0.998702;MQB=0.999919;MQSB=0.967143;BQB=5.25372e-06;MQ0F=0.0909091;AF1=0.499999;AC1=1;DP4=9,19,9,6;MQ=30;FQ=28.0219;PV4=0.108927,1.83971e-06,1,1 GT:PL 0/1:55,0,226
Scaffold_1 821164 . T C 210.462 PASS DP=78;VDB=4.36958e-06;SGB=-0.693146;RPB=0.608245;MQB=0.952847;MQSB=0.877488;BQB=0.507009;MQ0F=0.128205;AF1=0.829413;AC1=1;DP4=1,7,19,24;MQ=26;FQ=-25.9966;PV4=0.127257,1,0.444831,0.0962135 GT:PL 0/1:239,0,1
Scaffold_1 821173 . A C 180.639 PASS DP=57;VDB=1.19169e-05;SGB=-0.69311;RPB=0.374814;MQB=0.782445;MQSB=0.0634024;BQB=0.736054;MQ0F=0.157895;AF1=1;AC1=2;DP4=3,3,11,20;MQ=25;FQ=-37.9865;PV4=0.653385,0.29742,1,0.442304 GT:PL 1/1:213,11,0
Scaffold_1 821181 . G A 134.766 PASS DP=42;VDB=8.33796e-06;SGB=-0.692976;RPB=0.481828;MQB=0.987103;MQSB=0.0608101;BQB=0.901039;MQ0F=0.119048;AF1=1;AC1=2;DP4=2,3,8,18;MQ=24;FQ=-32.988;PV4=1,0.154598,1,1 GT:PL 1/1:166,6,0
Scaffold_1 821598 . A C 144.008 PASS DP=42;VDB=8.74966e-06;SGB=-0.676189;RPB=0.109954;MQB=0.117745;MQSB=0.690244;BQB=0.694645;MQ0F=0.214286;AF1=0.5;AC1=1;DP4=8,3,11,0;MQ=31;FQ=50.0153;PV4=0.214286,1,1,1 GT:PL 0/1:174,0,77
Scaffold_1 821611 . G T 38.0077 PASS DP=42;VDB=0.0149992;SGB=-0.556411;RPB=0.894396;MQB=0.0301974;MQSB=0.260295;BQB=0.525788;MQ0F=0.214286;AF1=0.5;AC1=1;DP4=13,3,4,0;MQ=31;FQ=41.0155;PV4=1,0.0430204,1,1 GT:PL 0/1:68,0,143
Scaffold_1 821616 . G A 51.0072 PASS DP=40;VDB=0.00868673;SGB=-0.590765;RPB=0.473944;MQB=0.657047;MQSB=0.846482;BQB=0.133289;MQ0F=0.225;AF1=0.5;AC1=1;DP4=13,2,1,4;MQ=31;FQ=54.0153;PV4=0.0139319,0.00662085,1,1 GT:PL 0/1:81,0,152
Scaffold_1 821620 . C T 53.0072 PASS DP=41;VDB=0.000454598;SGB=-0.651104;RPB=0.554308;MQB=0.948282;MQSB=0.976675;BQB=0.249764;MQ0F=0.219512;AF1=0.5;AC1=1;DP4=10,3,3,5;MQ=31;FQ=56.0154;PV4=0.163743,0.00692127,0.372367,0.311093 GT:PL 0/1:83,0,183
Scaffold_1 821632 . G A 16.1143 PASS DP=40;VDB=0.0315649;SGB=-0.590765;RPB=0.779897;MQB=0.987799;MQSB=0.919568;BQB=0.455811;MQ0F=0.225;AF1=0.499994;AC1=1;DP4=10,7,4,1;MQ=31;FQ=19.069;PV4=0.612972,1,0.436402,1 GT:PL 0/1:46,0,217
Scaffold_1 821648 . T G 18.0758 PASS DP=13;VDB=0.0238972;SGB=-0.556411;RPB=0.405132;MQB=1.01283;MQSB=0.8;BQB=0.607698;MQ0F=0.230769;AF1=0.500096;AC1=1;DP4=2,1,3,1;MQ=27;FQ=7.66145;PV4=1,1,1,0.026701 GT:PL 0/1:48,0,34
Scaffold_1 822423 . C T 74.0075 PASS DP=21;VDB=0.00625083;SGB=-0.616816;RPB=0.931779;MQB=0.931779;MQSB=0.94394;BQB=0.186356;MQ0F=0;AF1=0.5;AC1=1;DP4=6,0,2,4;MQ=41;FQ=77.0139;PV4=0.0606061,0.0350912,1,1 GT:PL 0/1:104,0,138
Scaffold_1 822442 . A C 110.008 PASS DP=47;VDB=0.00513213;SGB=-0.616816;RPB=0.860708;MQB=0.159215;MQSB=0.883612;BQB=0.731277;MQ0F=0;AF1=0.5;AC1=1;DP4=17,3,5,1;MQ=45;FQ=113.016;PV4=1,0.254927,1,1 GT:PL 0/1:140,0,255
Scaffold_1 822469 . C T 20.0499 PASS DP=72;VDB=0.0230738;SGB=-0.590765;RPB=0.836464;MQB=0.596861;MQSB=0.402672;BQB=0.399532;MQ0F=0.0138889;AF1=0.499997;AC1=1;DP4=29,7,4,1;MQ=48;FQ=23.0366;PV4=1,0.112875,1,1 GT:PL 0/1:50,0,255
Scaffold_1 822470 . G A 108.008 PASS DP=72;VDB=0.00399191;SGB=-0.670168;RPB=0.660508;MQB=0.452185;MQSB=0.284272;BQB=0.308748;MQ0F=0.0138889;AF1=0.5;AC1=1;DP4=27,4,8,2;MQ=48;FQ=111.016;PV4=0.622117,0.0569123,0.0350359,1 GT:PL 0/1:138,0,255
Scaffold_1 822501 . A G 225.009 PASS DP=75;VDB=0.000710841;SGB=-0.693127;RPB=0.564642;MQB=0.957116;MQSB=0.0249381;BQB=1;MQ0F=0.0133333;AF1=0.5;AC1=1;DP4=7,1,24,9;MQ=48;FQ=105.016;PV4=0.653237,1,0.495016,0.371465 GT:PL 0/1:255,0,132
Scaffold_1 822518 . A T 144.008 PASS DP=69;VDB=0.032944;SGB=-0.670168;RPB=0.989581;MQB=0.91004;MQSB=0.375272;BQB=0.375781;MQ0F=0.0144928;AF1=0.5;AC1=1;DP4=19,10,5,5;MQ=49;FQ=147.017;PV4=0.463306,0.0192221,1,1 GT:PL 0/1:174,0,255
Scaffold_1 822545 . G A 21.0411 PASS DP=54;VDB=0.00981221;SGB=-0.590765;RPB=0.2628;MQB=0.978682;MQSB=0.293758;BQB=0.183176;MQ0F=0.0185185;AF1=0.499998;AC1=1;DP4=18,9,4,1;MQ=48;FQ=24.0321;PV4=1,0.0264861,1,1 GT:PL 0/1:51,0,255
Scaffold_1 822567 . A G 225.009 PASS DP=33;VDB=1.87073e-05;SGB=-0.686358;RPB=0.261513;MQB=0.992095;MQSB=0.479639;BQB=0.851535;MQ0F=0.030303;AF1=0.5;AC1=1;DP4=3,0,9,5;MQ=45;FQ=39.0157;PV4=0.514706,1,0.412094,1 GT:PL 0/1:255,0,66
Scaffold_1 934798 . G A 47.7647 PASS DP=14;VDB=0.00467539;SGB=-0.683931;RPB=1;MQB=1;MQSB=0.434598;BQB=1;MQ0F=0.285714;AF1=1;AC1=2;DP4=0,1,6,7;MQ=18;FQ=-32.988;PV4=1,1,0.0319587,0.38178 GT:PL 1/1:79,6,0
Scaffold_1 939130 . A G 31.0104 PASS DP=19;VDB=0.00474791;SGB=-0.590765;RPB=0.0108952;MQB=0.157651;MQSB=0.491386;BQB=0.970092;MQ0F=0.105263;AF1=0.5;AC1=1;DP4=4,9,5,0;MQ=56;FQ=34.0168;PV4=0.0294118,1,0.00102106,1 GT:PL 0/1:61,0,255
Scaffold_1 939163 . C T 15.1417 PASS DP=19;VDB=0.0143941;SGB=-0.590765;RPB=0.468083;MQB=0.0424635;MQSB=0.206192;BQB=0.645028;MQ0F=0.105263;AF1=0.499992;AC1=1;DP4=5,8,5,0;MQ=53;FQ=18.0829;PV4=0.0359477,0.119378,7.24687e-05,1 GT:PL 0/1:45,0,255
Scaffold_1 939179 . A T 42.0073 PASS DP=21;VDB=0.226058;SGB=-0.616816;RPB=0.425907;MQB=0.0867743;MQSB=0.393241;BQB=0.161503;MQ0F=0.0952381;AF1=0.5;AC1=1;DP4=4,7,6,0;MQ=55;FQ=45.0154;PV4=0.0345023,0.031259,0.00552903,1 GT:PL 0/1:72,0,255
Scaffold_1 939229 . G C 30.0112 PASS DP=12;VDB=0.588406;SGB=-0.511536;RPB=0.994805;MQB=0.716531;MQSB=0.888889;BQB=0.716531;MQ0F=0;AF1=0.5;AC1=1;DP4=6,2,3,0;MQ=60;FQ=33.0172;PV4=1,0.0815569,0.0519441,1 GT:PL 0/1:60,0,223
Scaffold_1 939233 . A G 12.272 PASS DP=11;VDB=0.66;SGB=-0.453602;RPB=0.857143;MQB=0.5;MQSB=0.857143;BQB=0.428571;MQ0F=0;AF1=0.499984;AC1=1;DP4=5,2,2,0;MQ=60;FQ=15.1496;PV4=1,0.192435,0.0261782,1 GT:PL 0/1:42,0,213
Scaffold_1 939240 . A C 15.1417 PASS DP=8;VDB=0.66;SGB=-0.453602;RPB=0.666667;MQB=0.5;MQSB=0.833333;BQB=0.333333;MQ0F=0;AF1=0.499992;AC1=1;DP4=4,2,2,0;MQ=60;FQ=18.0829;PV4=1,0.198254,0.0390704,0.292725 GT:PL 0/1:45,0,171
Scaffold_1 939298 . G T 65.0073 PASS DP=9;VDB=0.828494;SGB=-0.556411;RPB=0.406082;MQB=0.0812164;MQSB=0.577865;BQB=0.89338;MQ0F=0;AF1=0.5;AC1=1;DP4=4,1,2,2;MQ=55;FQ=68.0151;PV4=0.52381,0.303711,0.0487497,1 GT:PL 0/1:95,0,135
Scaffold_1 939308 . A T 53.0072 PASS DP=7;VDB=0.0532881;SGB=-0.511536;RPB=0.202566;MQB=0.202566;MQSB=0.810265;BQB=1.01283;MQ0F=0;AF1=0.5;AC1=1;DP4=3,1,1,2;MQ=54;FQ=56.0147;PV4=0.485714,0.422836,0.0473265,1 GT:PL 0/1:83,0,121
Scaffold_1 939319 . G A 70.0074 PASS DP=8;VDB=0.152777;SGB=-0.556411;RPB=0.124046;MQB=0.248092;MQSB=0.600535;BQB=0.868321;MQ0F=0;AF1=0.5;AC1=1;DP4=3,1,2,2;MQ=55;FQ=72.7498;PV4=1,0.420221,0.0848815,0.456241 GT:PL 0/1:100,0,112
Scaffold_1 939328 . T C 66.0074 PASS DP=8;VDB=0.28399;SGB=-0.511536;RPB=0.202566;MQB=0.405132;MQSB=0.8;BQB=0.202566;MQ0F=0;AF1=0.5;AC1=1;DP4=3,1,2,1;MQ=58;FQ=59.5004;PV4=1,1,0.0750351,1 GT:PL 0/1:96,0,87
Scaffold_1 939330 . G C 87.0076 PASS DP=7;VDB=0.152777;SGB=-0.556411;RPB=0.202566;MQB=0.405132;MQSB=0.2;BQB=0.607698;MQ0F=0;AF1=0.5;AC1=1;DP4=3,0,2,2;MQ=54;FQ=40.0155;PV4=0.428571,1,0.122251,1 GT:PL 0/1:117,0,67
Scaffold_1 939358 . C A 149.008 PASS DP=11;VDB=0.576666;SGB=-0.636426;RPB=0.916482;MQB=0.274945;MQSB=0.238087;BQB=0.641538;MQ0F=0;AF1=0.5;AC1=1;DP4=2,1,3,4;MQ=52;FQ=52.0153;PV4=1,1,0.0621999,1 GT:PL 0/1:179,0,79
Scaffold_1 939364 . G A 128.008 PASS DP=11;VDB=0.733113;SGB=-0.616816;RPB=0.895781;MQB=0.111973;MQSB=0.238087;BQB=0.503877;MQ0F=0;AF1=0.5;AC1=1;DP4=3,1,2,4;MQ=52;FQ=80.0156;PV4=0.52381,1,0.0215712,1 GT:PL 0/1:158,0,107
Scaffold_1 939375 . G C 136.008 PASS DP=11;VDB=0.358309;SGB=-0.616816;RPB=0.895781;MQB=0.279932;MQSB=0.335918;BQB=1.00775;MQ0F=0;AF1=0.5;AC1=1;DP4=3,1,3,3;MQ=55;FQ=83.0157;PV4=0.571429,1,0.0510881,1 GT:PL 0/1:166,0,110
Scaffold_1 939421 . G A 119.008 PASS DP=13;VDB=0.60156;SGB=-0.590765;RPB=0.475476;MQB=0.0891517;MQSB=0.472367;BQB=0.148586;MQ0F=0;AF1=0.5;AC1=1;DP4=2,4,1,4;MQ=54;FQ=121.377;PV4=1,1,0.00622875,1 GT:PL 0/1:149,0,157
Scaffold_1 939445 . T G 110.008 PASS DP=14;VDB=0.300397;SGB=-0.590765;RPB=0.213769;MQB=0.213769;MQSB=0.651439;BQB=0.723173;MQ0F=0;AF1=0.5;AC1=1;DP4=2,6,2,3;MQ=56;FQ=113.016;PV4=1,1,0.00369674,1 GT:PL 0/1:140,0,189
Scaffold_1 939452 . C A 93.0077 PASS DP=15;VDB=0.397076;SGB=-0.556411;RPB=0.727822;MQB=0.167959;MQSB=0.641538;BQB=0.895781;MQ0F=0;AF1=0.5;AC1=1;DP4=2,4,1,3;MQ=54;FQ=96.0158;PV4=1,1,0.00206354,0.120752 GT:PL 0/1:123,0,173
Scaffold_1 939466 . G T 82.0076 PASS DP=15;VDB=0.409395;SGB=-0.556411;RPB=0.241161;MQB=0.442128;MQSB=0.979382;BQB=0.643095;MQ0F=0;AF1=0.5;AC1=1;DP4=2,5,1,3;MQ=52;FQ=85.0157;PV4=1,1,0.158026,0.316663 GT:PL 0/1:112,0,171
Scaffold_1 939527 . C T 54.0072 PASS DP=14;VDB=0.756056;SGB=-0.556411;RPB=0.94394;MQB=0.203896;MQSB=0.3;BQB=0.793923;MQ0F=0.0714286;AF1=0.5;AC1=1;DP4=1,7,1,3;MQ=53;FQ=57.0154;PV4=1,1,0.0171439,1 GT:PL 0/1:84,0,174
Scaffold_1 939533 . G T 15.1417 PASS DP=15;VDB=0.519801;SGB=-0.511536;RPB=0.485672;MQB=0.596251;MQSB=0.493254;BQB=0.707404;MQ0F=0.0666667;AF1=0.499992;AC1=1;DP4=4,5,0,3;MQ=51;FQ=18.0829;PV4=0.490909,1,0.054725,1 GT:PL 0/1:45,0,226
Scaffold_1 939552 . A G 37.0079 PASS DP=13;VDB=0.794767;SGB=-0.590765;RPB=0.742931;MQB=0.0297172;MQSB=0.148586;BQB=0.564628;MQ0F=0.0769231;AF1=0.5;AC1=1;DP4=1,5,4,1;MQ=50;FQ=40.0156;PV4=0.0800866,0.0643625,0.000185048,1 GT:PL 0/1:67,0,154
Scaffold_1 939555 . T A 62.0073 PASS DP=13;VDB=0.740842;SGB=-0.556411;RPB=0.89338;MQB=0.0812164;MQSB=0.406082;BQB=0.89338;MQ0F=0.0769231;AF1=0.5;AC1=1;DP4=1,4,3,1;MQ=52;FQ=65.015;PV4=0.206349,0.328939,2.84642e-08,0.495962 GT:PL 0/1:92,0,132
Scaffold_1 939583 . G C 11.3381 PASS DP=15;VDB=0.868052;SGB=-0.511536;RPB=1;MQB=0.239651;MQSB=0.777113;BQB=0.879351;MQ0F=0.0666667;AF1=0.49998;AC1=1;DP4=7,3,0,3;MQ=49;FQ=14.1838;PV4=0.0699301,1,0.0100118,1 GT:PL 0/1:41,0,232
Scaffold_1 939600 . A G 155.008 PASS DP=13;VDB=0.351291;SGB=-0.651104;RPB=0.793923;MQB=0.0249144;MQSB=0.813189;BQB=0.94394;MQ0F=0.0769231;AF1=0.5;AC1=1;DP4=3,1,3,5;MQ=47;FQ=81.0157;PV4=0.545455,0.349351,0.00438066,0.165656 GT:PL 0/1:185,0,108
Scaffold_1 939603 . T C 45.0072 PASS DP=13;VDB=0.251321;SGB=-0.511536;RPB=0.382304;MQB=0.382304;MQSB=0.40926;BQB=0.707404;MQ0F=0.0769231;AF1=0.5;AC1=1;DP4=5,4,2,1;MQ=47;FQ=48.0153;PV4=1,1,0.288816,1 GT:PL 0/1:75,0,201
Scaffold_1 939617 . T C 175.009 PASS DP=13;VDB=0.316575;SGB=-0.651104;RPB=0.958048;MQB=0.0137638;MQSB=0.84246;BQB=0.273507;MQ0F=0;AF1=0.5;AC1=1;DP4=4,1,4,4;MQ=49;FQ=81.0157;PV4=0.56488,1,7.01307e-08,0.226651 GT:PL 0/1:205,0,108
Scaffold_1 939639 . C T 67.0074 PASS DP=17;VDB=0.349195;SGB=-0.590765;RPB=0.829029;MQB=0.339596;MQSB=0.972604;BQB=0.692463;MQ0F=0;AF1=0.5;AC1=1;DP4=8,2,1,4;MQ=50;FQ=70.0155;PV4=0.0889111,1,0.0334413,1 GT:PL 0/1:97,0,186
Scaffold_1 939673 . G T 25.0205 PASS DP=17;VDB=0.0295886;SGB=-0.511536;RPB=0.0368832;MQB=0.987952;MQSB=0.271965;BQB=0.599223;MQ0F=0;AF1=0.499999;AC1=1;DP4=5,6,3,0;MQ=51;FQ=28.0219;PV4=0.208791,0.211937,1,0.0961593 GT:PL 0/1:55,0,245
Scaffold_1 939696 . A G 223.009 PASS DP=18;VDB=0.810923;SGB=-0.686358;RPB=0.38558;MQB=0.0652634;MQSB=0.364027;BQB=0.236074;MQ0F=0;AF1=0.500006;AC1=1;DP4=3,1,7,7;MQ=51;FQ=19.069;PV4=0.588235,1,0.0260167,0.113758 GT:PL 0/1:253,0,46
Scaffold_1 939707 . G A 128.008 PASS DP=17;VDB=0.257579;SGB=-0.636426;RPB=0.240074;MQB=0.428703;MQSB=0.885987;BQB=0.948864;MQ0F=0;AF1=0.5;AC1=1;DP4=3,4,4,3;MQ=49;FQ=130.043;PV4=1,0.434869,0.0926118,1 GT:PL 0/1:158,0,164
Scaffold_1 939712 . C T 38.0077 PASS DP=16;VDB=0.963077;SGB=-0.511536;RPB=0.693041;MQB=0.987952;MQSB=0.714506;BQB=0.987952;MQ0F=0;AF1=0.5;AC1=1;DP4=6,5,1,2;MQ=51;FQ=41.0155;PV4=1,1,1,0.00692058 GT:PL 0/1:68,0,233
Scaffold_1 939727 . T C 148.008 PASS DP=14;VDB=0.175997;SGB=-0.651104;RPB=0.664757;MQB=0.664757;MQSB=1;BQB=0.77718;MQ0F=0;AF1=0.5;AC1=1;DP4=3,3,5,3;MQ=50;FQ=129.982;PV4=1,0.393909,0.156883,1 GT:PL 0/1:178,0,157
Scaffold_1 939753 . G T 12.272 PASS DP=13;VDB=0.64;SGB=-0.453602;RPB=0.333333;MQB=0.944444;MQSB=0.950952;BQB=0.666667;MQ0F=0;AF1=0.499984;AC1=1;DP4=4,5,2,0;MQ=49;FQ=15.1496;PV4=0.454545,1,1,0.110564 GT:PL 0/1:42,0,204
Scaffold_1 939777 . A G 115.019 PASS DP=10;VDB=0.021281;SGB=-0.590765;RPB=1;MQB=1;MQSB=0.861511;BQB=1;MQ0F=0;AF1=0.501256;AC1=1;DP4=0,1,3,2;MQ=51;FQ=-5.445;PV4=1,0.45817,0.188914,1 GT:PL 0/1:145,0,23
Scaffold_1 939800 . T G 117.019 PASS DP=9;VDB=0.543918;SGB=-0.590765;RPB=1;MQB=1;MQSB=0.875;BQB=1;MQ0F=0;AF1=0.501256;AC1=1;DP4=1,0,3,2;MQ=50;FQ=-5.445;PV4=1,1,0.214137,1 GT:PL 0/1:147,0,23
Scaffold_1 939814 . C T 104.008 PASS DP=11;VDB=0.969631;SGB=-0.616816;RPB=0.783809;MQB=0.503877;MQSB=0.503877;BQB=0.895781;MQ0F=0;AF1=0.5;AC1=1;DP4=2,2,4,2;MQ=51;FQ=75.0129;PV4=1,0.486096,0.150157,0.240594 GT:PL 0/1:134,0,102
Scaffold_1 939826 . G A 92.0077 PASS DP=12;VDB=0.943071;SGB=-0.590765;RPB=0.406082;MQB=0.406082;MQSB=0.730948;BQB=0.974597;MQ0F=0;AF1=0.5;AC1=1;DP4=2,2,2,3;MQ=50;FQ=91.4768;PV4=1,0.272273,0.0399431,0.245627 GT:PL 0/1:122,0,121
Scaffold_1 939840 . T G 103.008 PASS DP=10;VDB=0.200442;SGB=-0.590765;RPB=0.750668;MQB=0.150134;MQSB=0.868321;BQB=0.900802;MQ0F=0;AF1=0.5;AC1=1;DP4=1,2,3,2;MQ=49;FQ=58.0153;PV4=1,1,0.00403264,0.227391 GT:PL 0/1:133,0,85
Scaffold_1 939858 . C T 45.0072 PASS DP=12;VDB=0.142856;SGB=-0.511536;RPB=0.274945;MQB=0.824834;MQSB=0.727822;BQB=0.641538;MQ0F=0;AF1=0.5;AC1=1;DP4=4,3,2,1;MQ=46;FQ=48.0153;PV4=1,0.0697393,0.376676,0.101692 GT:PL 0/1:75,0,174
Scaffold_1 939867 . G A 12.272 PASS DP=13;VDB=0.44;SGB=-0.453602;RPB=0.555556;MQB=0.722222;MQSB=0.475476;BQB=0.555556;MQ0F=0;AF1=0.499984;AC1=1;DP4=4,5,2,0;MQ=48;FQ=15.1496;PV4=0.454545,1,0.368786,0.264967 GT:PL 0/1:42,0,199
Scaffold_1 939875 . T C 133.008 PASS DP=14;VDB=0.347872;SGB=-0.636426;RPB=0.760054;MQB=0.0194886;MQSB=0.542126;BQB=0.760054;MQ0F=0;AF1=0.5;AC1=1;DP4=1,4,5,2;MQ=50;FQ=91.0157;PV4=0.242424,1,7.53288e-05,0.169105 GT:PL 0/1:163,0,118
Scaffold_1 939880 . G A 69.0074 PASS DP=14;VDB=0.535497;SGB=-0.556411;RPB=0.493254;MQB=0.397295;MQSB=0.71154;BQB=0.94394;MQ0F=0;AF1=0.5;AC1=1;DP4=4,4,2,2;MQ=48;FQ=72.0156;PV4=1,1,0.0351828,1 GT:PL 0/1:99,0,203
Scaffold_1 939889 . G A 76.0075 PASS DP=15;VDB=0.855578;SGB=-0.590765;RPB=0.908075;MQB=0.213769;MQSB=0.531709;BQB=0.989343;MQ0F=0;AF1=0.5;AC1=1;DP4=4,4,3,2;MQ=47;FQ=79.0156;PV4=1,1,0.0120492,0.160105 GT:PL 0/1:106,0,206
Scaffold_1 939893 . C G 141.008 PASS DP=17;VDB=0.631876;SGB=-0.662043;RPB=0.980199;MQB=0.011109;MQSB=0.364827;BQB=0.99115;MQ0F=0;AF1=0.5;AC1=1;DP4=1,4,7,2;MQ=49;FQ=79.0156;PV4=0.0909091,1,0.00127748,0.467987 GT:PL 0/1:171,0,106
Scaffold_1 939918 . G A 57.0073 PASS DP=17;VDB=0.771524;SGB=-0.590765;RPB=0.606531;MQB=0.308647;MQSB=0.271965;BQB=0.341108;MQ0F=0;AF1=0.5;AC1=1;DP4=4,5,4,1;MQ=49;FQ=60.0154;PV4=0.300699,0.0526787,0.0260334,1 GT:PL 0/1:87,0,222
Scaffold_1 939957 . G A 76.0075 PASS DP=18;VDB=0.705481;SGB=-0.590765;RPB=0.914947;MQB=0.134585;MQSB=0.398338;BQB=0.987578;MQ0F=0;AF1=0.5;AC1=1;DP4=7,5,4,1;MQ=49;FQ=79.0156;PV4=0.600032,0.474605,0.0764235,1 GT:PL 0/1:106,0,240
Scaffold_1 939960 . C T 48.0072 PASS DP=17;VDB=0.100421;SGB=-0.556411;RPB=0.991513;MQB=0.808101;MQSB=0.534333;BQB=0.236847;MQ0F=0;AF1=0.5;AC1=1;DP4=7,4,2,2;MQ=51;FQ=51.0153;PV4=1,0.187455,0.209471,1 GT:PL 0/1:78,0,255
Scaffold_1 939986 . T C 156.008 PASS DP=16;VDB=0.834894;SGB=-0.670168;RPB=0.544711;MQB=0.0224408;MQSB=0.697617;BQB=0.728422;MQ0F=0;AF1=0.5;AC1=1;DP4=4,1,7,3;MQ=48;FQ=98.0159;PV4=1,0.131028,0.00276643,0.24764 GT:PL 0/1:186,0,125
Scaffold_1 939989 . C T 150.008 PASS DP=16;VDB=0.839156;SGB=-0.670168;RPB=0.544711;MQB=0.0224408;MQSB=0.697617;BQB=0.544711;MQ0F=0;AF1=0.5;AC1=1;DP4=4,1,7,3;MQ=48;FQ=98.0159;PV4=1,0.0933133,0.00276643,0.175044 GT:PL 0/1:180,0,125
Scaffold_1 940004 . G A 165.009 PASS DP=17;VDB=0.683425;SGB=-0.651104;RPB=0.434598;MQB=0.0672055;MQSB=0.811936;BQB=0.740818;MQ0F=0;AF1=0.5;AC1=1;DP4=4,2,4,4;MQ=53;FQ=116.016;PV4=0.62704,1,0.00703618,0.418274 GT:PL 0/1:195,0,143
Scaffold_1 940013 . C T 51.0072 PASS DP=15;VDB=0.472095;SGB=-0.556411;RPB=0.612626;MQB=0.960789;MQSB=0.526122;BQB=0.697676;MQ0F=0;AF1=0.5;AC1=1;DP4=7,3,2,2;MQ=52;FQ=54.0154;PV4=0.58042,0.148684,0.403149,1 GT:PL 0/1:81,0,221
Scaffold_1 940020 . C T 26.0177 PASS DP=14;VDB=0.0560361;SGB=-0.511536;RPB=0.597928;MQB=0.127819;MQSB=0.591555;BQB=0.944459;MQ0F=0;AF1=0.499999;AC1=1;DP4=6,4,2,1;MQ=52;FQ=29.0205;PV4=1,1,0.0105247,1 GT:PL 0/1:56,0,228
Scaffold_1 940058 . A T 15.1417 PASS DP=12;VDB=0.14;SGB=-0.453602;RPB=1;MQB=0;MQSB=0.89338;BQB=0.714286;MQ0F=0;AF1=0.499992;AC1=1;DP4=4,3,1,1;MQ=55;FQ=18.0829;PV4=1,0.150765,1.3686e-05,1 GT:PL 0/1:45,0,196
Scaffold_1 940072 . T C 47.0072 PASS DP=15;VDB=0.775568;SGB=-0.556411;RPB=0.604728;MQB=0.785785;MQSB=0.777113;BQB=0.928296;MQ0F=0;AF1=0.5;AC1=1;DP4=6,3,0,4;MQ=49;FQ=50.0153;PV4=0.0699301,1,0.316478,0.19758 GT:PL 0/1:77,0,201
Scaffold_1 940073 . G A 26.0177 PASS DP=15;VDB=0.901652;SGB=-0.511536;RPB=0.879351;MQB=0.795669;MQSB=0.695312;BQB=0.996435;MQ0F=0;AF1=0.499999;AC1=1;DP4=7,3,0,3;MQ=51;FQ=29.0205;PV4=0.0699301,1,0.347924,0.276982 GT:PL 0/1:56,0,223
Scaffold_1 940098 . C T 110.008 PASS DP=14;VDB=0.823644;SGB=-0.636426;RPB=0.531709;MQB=0.0102252;MQSB=0.41985;BQB=0.695312;MQ0F=0;AF1=0.5;AC1=1;DP4=4,2,1,6;MQ=50;FQ=106.043;PV4=0.102564,1,6.87754e-05,1 GT:PL 0/1:140,0,134
Scaffold_1 940101 . A C 121.008 PASS DP=15;VDB=0.944418;SGB=-0.651104;RPB=0.273507;MQB=0.0137638;MQSB=0.695312;BQB=0.958048;MQ0F=0;AF1=0.5;AC1=1;DP4=4,1,2,6;MQ=47;FQ=106.93;PV4=0.102564,0.28922,0.000349382,1 GT:PL 0/1:151,0,134
Scaffold_1 940116 . G A 24.0241 PASS DP=12;VDB=0.93184;SGB=-0.511536;RPB=0.920044;MQB=0.263597;MQSB=0.920044;BQB=1;MQ0F=0;AF1=0.499999;AC1=1;DP4=2,6,1,2;MQ=50;FQ=27.0236;PV4=1,0.376494,0.0496594,0.30234 GT:PL 0/1:54,0,161
Scaffold_1 940142 . G C 66.0074 PASS DP=11;VDB=0.0424884;SGB=-0.590765;RPB=0.564628;MQB=0.0297172;MQSB=0.444444;BQB=0.950952;MQ0F=0;AF1=0.5;AC1=1;DP4=2,4,0,5;MQ=52;FQ=69.0154;PV4=0.454545,0.42209,0.000516225,1 GT:PL 0/1:96,0,142
Scaffold_1 940150 . C A 27.0155 PASS DP=11;VDB=0.17915;SGB=-0.511536;RPB=0.183296;MQB=0.274945;MQSB=0.375;BQB=0.641538;MQ0F=0;AF1=0.499999;AC1=1;DP4=2,5,0,3;MQ=51;FQ=30.0194;PV4=1,0.151588,0.0457699,1 GT:PL 0/1:57,0,185
Scaffold_1 940181 . T G 60.0073 PASS DP=12;VDB=0.3423;SGB=-0.616816;RPB=0.208021;MQB=0.0891517;MQSB=0.444444;BQB=0.950952;MQ0F=0;AF1=0.5;AC1=1;DP4=1,4,1,5;MQ=50;FQ=63.0154;PV4=1,0.262254,0.00666425,0.10045 GT:PL 0/1:90,0,137
Scaffold_1 940184 . A G 58.0073 PASS DP=13;VDB=0.516921;SGB=-0.590765;RPB=0.683497;MQB=0.0297172;MQSB=0.444444;BQB=0.742931;MQ0F=0;AF1=0.5;AC1=1;DP4=2,4,0,5;MQ=50;FQ=61.0154;PV4=0.454545,1,0.000359317,1 GT:PL 0/1:88,0,153
Scaffold_1 940194 . G A 19.061 PASS DP=16;VDB=0.951887;SGB=-0.511536;RPB=0.987952;MQB=0.782349;MQSB=0.333333;BQB=0.782349;MQ0F=0;AF1=0.499997;AC1=1;DP4=2,9,0,3;MQ=44;FQ=22.0421;PV4=1,1,0.315742,1 GT:PL 0/1:49,0,201
Scaffold_1 940243 . T G 89.0077 PASS DP=17;VDB=0.00907312;SGB=-0.651104;RPB=0.0289435;MQB=0.00524752;MQSB=0.687289;BQB=0.351229;MQ0F=0;AF1=0.5;AC1=1;DP4=2,5,1,7;MQ=47;FQ=92.0158;PV4=0.569231,0.0526067,4.49194e-05,1 GT:PL 0/1:119,0,211
Scaffold_1 940251 . T G 72.0074 PASS DP=16;VDB=0.00710099;SGB=-0.651104;RPB=0.163537;MQB=0.0137638;MQSB=0.447727;BQB=0.50373;MQ0F=0;AF1=0.5;AC1=1;DP4=2,3,1,7;MQ=43;FQ=75.0156;PV4=0.51049,0.0457368,0.00020937,1 GT:PL 0/1:102,0,166
Scaffold_1 940269 . A T 92.0077 PASS DP=14;VDB=0.00724645;SGB=-0.662043;RPB=0.928296;MQB=0.0211283;MQSB=0.590909;BQB=0.180092;MQ0F=0;AF1=0.5;AC1=1;DP4=1,3,1,8;MQ=41;FQ=93.8225;PV4=1,0.0254219,0.000761197,1 GT:PL 0/1:122,0,127
Scaffold_1 940290 . T C 77.0075 PASS DP=14;VDB=0.0101473;SGB=-0.651104;RPB=0.968069;MQB=0.0249144;MQSB=0.55;BQB=0.352725;MQ0F=0;AF1=0.5;AC1=1;DP4=1,3,1,7;MQ=41;FQ=79.9939;PV4=1,0.0515979,0.000440051,1 GT:PL 0/1:107,0,130
Scaffold_1 940301 . C A 17.0924 PASS DP=13;VDB=0.0295886;SGB=-0.511536;RPB=0.382304;MQB=0.811069;MQSB=0.5;BQB=0.0853036;MQ0F=0;AF1=0.499995;AC1=1;DP4=1,8,1,2;MQ=39;FQ=20.058;PV4=0.454545,0.0341283,1,1 GT:PL 0/1:47,0,152
Scaffold_1 940305 . G A 47.0072 PASS DP=13;VDB=0.0295886;SGB=-0.511536;RPB=0.382304;MQB=0.811069;MQSB=0.5;BQB=0.596251;MQ0F=0;AF1=0.5;AC1=1;DP4=1,8,1,2;MQ=39;FQ=50.0153;PV4=0.454545,0.243987,1,1 GT:PL 0/1:77,0,152
Scaffold_1 940334 . C T 48.0072 PASS DP=11;VDB=0.698002;SGB=-0.556411;RPB=0.649731;MQB=0.89338;MQSB=0.5;BQB=0.649731;MQ0F=0;AF1=0.5;AC1=1;DP4=1,4,1,3;MQ=40;FQ=51.0152;PV4=1,0.131867,0.38253,1 GT:PL 0/1:78,0,124
Scaffold_1 940359 . T C 41.0101 PASS DP=5;VDB=0.839667;SGB=-0.511536;RPB=1;MQB=1;MQSB=1;BQB=1;MQ0F=0;AF1=0.500315;AC1=1;DP4=0,1,1,2;MQ=41;FQ=4.1333;PV4=1,1,0.153801,1 GT:PL 0/1:71,0,29
Scaffold_1 940362 . T G 32.0165 PASS DP=4;VDB=0.909987;SGB=-0.511536;RPB=1;MQB=1;BQB=1;MQ0F=0;AF1=0.500792;AC1=1;DP4=0,1,0,3;MQ=41;FQ=-4.11604;PV4=1,1,0.153801,1 GT:PL 0/1:62,0,25
Scaffold_1 940382 . C T 12.0443 PASS DP=2;VDB=0.38;SGB=-0.453602;MQ0F=0;AF1=1;AC1=2;DP4=0,0,0,2;MQ=29;FQ=-32.9882 GT:PL 1/1:43,6,0
Scaffold_1 940404 . T C 12.0443 PASS DP=2;VDB=0.38;SGB=-0.453602;MQ0F=0;AF1=1;AC1=2;DP4=0,0,0,2;MQ=29;FQ=-32.9882 GT:PL 1/1:43,6,0
Scaffold_1 940412 . G A 12.0443 PASS DP=2;VDB=0.38;SGB=-0.453602;MQ0F=0;AF1=1;AC1=2;DP4=0,0,0,2;MQ=29;FQ=-32.9882 GT:PL 1/1:43,6,0
Scaffold_1 940427 . A G 101.264 PASS DP=5;VDB=0.946848;SGB=-0.590765;MQSB=1;MQ0F=0;AF1=1;AC1=2;DP4=0,0,3,2;MQ=34;FQ=-41.9862 GT:PL 1/1:134,15,0
Scaffold_1 940441 . C T 93.2637 PASS DP=5;VDB=0.950423;SGB=-0.590765;MQSB=1;MQ0F=0;AF1=1;AC1=2;DP4=0,0,3,2;MQ=34;FQ=-41.9862 GT:PL 1/1:126,15,0
Scaffold_1 940446 . C G 103.264 PASS DP=5;VDB=0.953804;SGB=-0.590765;MQSB=1;MQ0F=0;AF1=1;AC1=2;DP4=0,0,3,2;MQ=34;FQ=-41.9862 GT:PL 1/1:136,15,0
Scaffold_1 940458 . G A 35.514 PASS DP=4;VDB=0.579441;SGB=-0.556411;MQSB=1;MQ0F=0;AF1=1;AC1=2;DP4=0,0,3,1;MQ=38;FQ=-38.9864 GT:PL 1/1:68,12,0
Scaffold_1 940492 . C T 57.0127 PASS DP=5;VDB=0.127985;SGB=-0.556411;RPB=1;MQB=1;BQB=1;MQ0F=0;AF1=0.500629;AC1=1;DP4=1,0,4,0;MQ=44;FQ=-3.53091;PV4=1,0.194419,0.0156373,1 GT:PL 0/1:87,0,26
Scaffold_1 940501 . C G 66.0128 PASS DP=5;VDB=0.118267;SGB=-0.556411;RPB=1;MQB=1;BQB=1;MQ0F=0;AF1=0.500629;AC1=1;DP4=1,0,4,0;MQ=44;FQ=-3.53091;PV4=1,0.189109,0.0156373,1 GT:PL 0/1:96,0,26
Scaffold_1 940529 . C T 53.0099 PASS DP=5;VDB=0.220755;SGB=-0.511536;RPB=1;MQB=1;BQB=1;MQ0F=0;AF1=0.500315;AC1=1;DP4=1,0,3,0;MQ=45;FQ=4.13345;PV4=1,0.333333,0.0468916,1 GT:PL 0/1:83,0,29
Scaffold_1 940564 . T C 60.9723 PASS DP=5;VDB=0.154358;SGB=-0.511536;MQ0F=0;AF1=1;AC1=2;DP4=0,0,3,0;MQ=39;FQ=-35.9869 GT:PL 1/1:93,9,0
Scaffold_1 940566 . A G 57.0504 PASS DP=5;VDB=0.0533436;SGB=-0.556411;RPB=1;MQB=1;BQB=1;MQ0F=0;AF1=0.505038;AC1=1;DP4=1,0,4,0;MQ=44;FQ=-10.4007;PV4=1,1,0.0156373,0.136114 GT:PL 0/1:87,0,17
Scaffold_1 940624 . C T 151.134 PASS DP=6;VDB=0.00722648;SGB=-0.616816;MQSB=1;MQ0F=0;AF1=1;AC1=2;DP4=0,0,2,4;MQ=37;FQ=-44.9861 GT:PL 1/1:184,18,0
Scaffold_1 940635 . C T 134.03 PASS DP=7;VDB=0.00722648;SGB=-0.616816;RPB=1;MQB=1;MQSB=0.810265;BQB=1;MQ0F=0;AF1=0.502513;AC1=1;DP4=1,0,2,4;MQ=41;FQ=-7.77799;PV4=0.428571,1,0.000798319,1 GT:PL 0/1:164,0,20
Scaffold_1 940677 . A G 126.008 PASS DP=10;VDB=0.00595258;SGB=-0.616816;RPB=0.0559863;MQB=0.0559863;MQSB=0.666643;BQB=1.00775;MQ0F=0;AF1=0.5;AC1=1;DP4=3,1,2,4;MQ=48;FQ=83.0156;PV4=0.52381,1,5.42535e-07,1 GT:PL 0/1:156,0,110
Scaffold_1 940685 . G A 128.008 PASS DP=10;VDB=0.00625083;SGB=-0.616816;RPB=0.0559863;MQB=0.0559863;MQSB=0.666643;BQB=0.167959;MQ0F=0;AF1=0.5;AC1=1;DP4=3,1,2,4;MQ=48;FQ=79.0156;PV4=0.52381,1,5.42535e-07,1 GT:PL 0/1:158,0,106
Scaffold_1 940686 . G T 128.008 PASS DP=10;VDB=0.00688729;SGB=-0.616816;RPB=0.0559863;MQB=0.0559863;MQSB=0.666643;BQB=0.503877;MQ0F=0;AF1=0.5;AC1=1;DP4=3,1,2,4;MQ=48;FQ=67.0155;PV4=0.52381,1,5.42535e-07,1 GT:PL 0/1:158,0,94
Scaffold_1 940720 . T A 123.008 PASS DP=14;VDB=0.168254;SGB=-0.636426;RPB=0.0511259;MQB=0.0102252;MQSB=0.635922;BQB=0.920266;MQ0F=0;AF1=0.5;AC1=1;DP4=5,1,3,4;MQ=48;FQ=122.477;PV4=0.265734,0.323117,8.84965e-05,1 GT:PL 0/1:153,0,152
Scaffold_1 940721 . T C 125.008 PASS DP=14;VDB=0.17561;SGB=-0.636426;RPB=0.0511259;MQB=0.0102252;MQSB=0.635922;BQB=0.777113;MQ0F=0;AF1=0.5;AC1=1;DP4=5,1,3,4;MQ=48;FQ=109.948;PV4=0.265734,1,8.84965e-05,1 GT:PL 0/1:155,0,137
Scaffold_1 940729 . C G 116.008 PASS DP=14;VDB=0.168254;SGB=-0.636426;RPB=0.0400123;MQB=0.00571605;MQSB=0.526122;BQB=0.428703;MQ0F=0;AF1=0.5;AC1=1;DP4=6,1,3,4;MQ=49;FQ=113.561;PV4=0.265734,1,3.03333e-05,0.317356 GT:PL 0/1:146,0,142
Scaffold_1 940738 . G C 91.0077 PASS DP=13;VDB=0.266887;SGB=-0.616816;RPB=0.0715762;MQB=0.0102252;MQSB=0.547344;BQB=0.961166;MQ0F=0;AF1=0.5;AC1=1;DP4=6,1,2,4;MQ=50;FQ=94.0158;PV4=0.102564,0.457518,4.60317e-05,0.0100227 GT:PL 0/1:121,0,169
Scaffold_1 940889 . A G 30.0112 PASS DP=11;VDB=0.327477;SGB=-0.511536;RPB=0.594025;MQB=0.263597;MQSB=0.263597;BQB=0.360295;MQ0F=0;AF1=0.5;AC1=1;DP4=7,1,1,2;MQ=56;FQ=33.0172;PV4=0.151515,0.0250664,0.0033436,0.155999 GT:PL 0/1:60,0,182
Scaffold_1 940905 . T C 33.0091 PASS DP=12;VDB=0.327477;SGB=-0.511536;RPB=0.594025;MQB=0.263597;MQSB=0.263597;BQB=0.360295;MQ0F=0;AF1=0.5;AC1=1;DP4=7,1,1,2;MQ=56;FQ=36.0162;PV4=0.151515,0.0133286,0.0033436,1 GT:PL 0/1:63,0,183
Scaffold_1 940914 . G A 59.0073 PASS DP=12;VDB=0.164317;SGB=-0.556411;RPB=0.310905;MQB=0.125315;MQSB=0.125315;BQB=0.444281;MQ0F=0;AF1=0.5;AC1=1;DP4=7,1,1,3;MQ=55;FQ=62.0154;PV4=0.0666667,0.17639,0.000895859,1 GT:PL 0/1:89,0,177
Scaffold_1 940924 . A T 74.0075 PASS DP=12;VDB=0.172317;SGB=-0.556411;RPB=0.763675;MQB=0.200967;MQSB=0.297172;BQB=0.924449;MQ0F=0;AF1=0.5;AC1=1;DP4=5,2,1,3;MQ=55;FQ=77.0156;PV4=0.242424,0.312092,0.00179653,1 GT:PL 0/1:104,0,186
Scaffold_1 940948 . C T 103.008 PASS DP=12;VDB=0.216674;SGB=-0.590765;RPB=0.475476;MQB=0.297172;MQSB=0.297172;BQB=0.950952;MQ0F=0;AF1=0.5;AC1=1;DP4=4,2,2,3;MQ=55;FQ=106.009;PV4=0.5671,0.420114,0.0140885,0.349652 GT:PL 0/1:133,0,161
Scaffold_1 940991 . C T 88.0076 PASS DP=15;VDB=0.548401;SGB=-0.590765;RPB=0.764228;MQB=0.486752;MQSB=0.586646;BQB=0.83527;MQ0F=0;AF1=0.5;AC1=1;DP4=5,4,3,2;MQ=57;FQ=91.0158;PV4=1,1,0.0242515,1 GT:PL 0/1:118,0,195
Scaffold_1 941070 . G T 39.0076 PASS DP=16;VDB=0.635923;SGB=-0.511536;RPB=0.601066;MQB=0.682254;MQSB=0.948436;BQB=0.832553;MQ0F=0;AF1=0.5;AC1=1;DP4=4,9,2,1;MQ=60;FQ=42.0155;PV4=0.517857,1,0.0158886,1 GT:PL 0/1:69,0,255
Scaffold_1 941219 . A T 42.0073 PASS DP=9;VDB=0.954319;SGB=-0.511536;RPB=0.750668;MQB=0.300267;MQSB=0.750668;BQB=0.600535;MQ0F=0;AF1=0.5;AC1=1;DP4=3,2,2,1;MQ=51;FQ=45.0154;PV4=1,0.31785,0.0217957,1 GT:PL 0/1:72,0,139
Scaffold_1 941233 . T C 53.0072 PASS DP=6;VDB=0.131948;SGB=-0.511536;RPB=0.28717;MQB=0.28717;MQSB=0.875;BQB=0.574341;MQ0F=0;AF1=0.5;AC1=1;DP4=2,1,2,1;MQ=51;FQ=55.8802;PV4=1,0.0856741,1.51952e-05,1 GT:PL 0/1:83,0,98
Scaffold_1 941234 . G A 29.0123 PASS DP=6;VDB=0.42;SGB=-0.453602;RPB=0.25;MQB=0.125;MQSB=0.875;BQB=1;MQ0F=0;AF1=0.5;AC1=1;DP4=3,1,1,1;MQ=51;FQ=32.0178;PV4=1,1,0.0471777,1 GT:PL 0/1:59,0,126
Scaffold_1 941235 . G A 29.0123 PASS DP=6;VDB=0.42;SGB=-0.453602;RPB=0.25;MQB=0.125;MQSB=0.875;BQB=0.5;MQ0F=0;AF1=0.5;AC1=1;DP4=3,1,1,1;MQ=51;FQ=32.0171;PV4=1,1,0.0471777,1 GT:PL 0/1:59,0,97
Scaffold_1 941270 . G A 10.42 PASS DP=8;VDB=0.44;SGB=-0.453602;RPB=0.666667;MQB=0.0833333;MQSB=0.916667;BQB=0.916667;MQ0F=0;AF1=0.499975;AC1=1;DP4=5,1,1,1;MQ=53;FQ=13.2265;PV4=0.464286,1,0.0125575,1 GT:PL 0/1:40,0,140
Scaffold_1 941281 . G A 70.0074 PASS DP=9;VDB=0.503808;SGB=-0.556411;RPB=0.974597;MQB=0.0812164;MQSB=0.809011;BQB=0.730948;MQ0F=0;AF1=0.5;AC1=1;DP4=4,1,2,2;MQ=52;FQ=72.9473;PV4=0.52381,1,4.19839e-09,0.290325 GT:PL 0/1:100,0,118
Scaffold_1 941286 . T G 70.0074 PASS DP=10;VDB=0.516498;SGB=-0.556411;RPB=0.649731;MQB=0.0812164;MQSB=0.974597;BQB=0.89338;MQ0F=0;AF1=0.5;AC1=1;DP4=3,2,2,2;MQ=52;FQ=73.0019;PV4=1,1,4.19839e-09,1 GT:PL 0/1:100,0,125
Scaffold_1 941299 . G T 51.0072 PASS DP=10;VDB=0.771809;SGB=-0.511536;RPB=0.733186;MQB=0.0916482;MQSB=0.895781;BQB=0.366593;MQ0F=0;AF1=0.5;AC1=1;DP4=5,2,1,2;MQ=53;FQ=54.0154;PV4=0.5,1,0.00202686,1 GT:PL 0/1:81,0,160
Scaffold_1 941332 . C T 63.0073 PASS DP=11;VDB=0.765925;SGB=-0.556411;RPB=0.783809;MQB=0.167959;MQSB=0.333321;BQB=0.0559863;MQ0F=0;AF1=0.5;AC1=1;DP4=4,2,1,3;MQ=56;FQ=66.0155;PV4=0.52381,0.000917884,0.00735081,0.0866847 GT:PL 0/1:93,0,172
Scaffold_1 941354 . C T 76.0075 PASS DP=11;VDB=0.765925;SGB=-0.556411;RPB=0.924449;MQB=0.200967;MQSB=0.475476;BQB=0.763675;MQ0F=0;AF1=0.5;AC1=1;DP4=4,3,1,3;MQ=56;FQ=79.0156;PV4=0.545455,1,0.00403486,0.322666 GT:PL 0/1:106,0,172
Scaffold_1 941365 . T C 77.0075 PASS DP=11;VDB=0.765925;SGB=-0.556411;RPB=0.924449;MQB=0.200967;MQSB=0.475476;BQB=0.924449;MQ0F=0;AF1=0.5;AC1=1;DP4=4,3,1,3;MQ=56;FQ=80.0157;PV4=0.545455,1,0.00403486,0.112334 GT:PL 0/1:107,0,183
Scaffold_1 941399 . A G 147.008 PASS DP=15;VDB=0.416565;SGB=-0.636426;RPB=0.381255;MQB=0.180092;MQSB=0.957526;BQB=0.816632;MQ0F=0;AF1=0.5;AC1=1;DP4=4,4,5,2;MQ=56;FQ=149.948;PV4=0.608392,1,0.00811362,1 GT:PL 0/1:177,0,195
Scaffold_1 941468 . G A 15.1417 PASS DP=15;VDB=0.22;SGB=-0.453602;RPB=0.3;MQB=0.8;MQSB=0.40926;BQB=0.9;MQ0F=0;AF1=0.499992;AC1=1;DP4=6,4,1,1;MQ=54;FQ=18.0829;PV4=1,1,0.337731,1 GT:PL 0/1:45,0,251
Scaffold_1 941480 . G A 75.0075 PASS DP=13;VDB=0.119109;SGB=-0.590765;RPB=0.40926;MQB=0.506703;MQSB=0.186356;BQB=0.760054;MQ0F=0;AF1=0.5;AC1=1;DP4=1,6,5,0;MQ=54;FQ=78.0156;PV4=0.0151515,0.25901,0.0600385,1 GT:PL 0/1:105,0,168
Scaffold_1 941483 . A G 119.008 PASS DP=13;VDB=0.12166;SGB=-0.616816;RPB=0.931779;MQB=0.372712;MQSB=0.372712;BQB=0.931779;MQ0F=0;AF1=0.5;AC1=1;DP4=1,5,5,1;MQ=56;FQ=115.823;PV4=0.0800866,1,0.0246661,1 GT:PL 0/1:149,0,144
Scaffold_1 941487 . C T 40.0075 PASS DP=13;VDB=0.235052;SGB=-0.556411;RPB=0.793923;MQB=0.272074;MQSB=0.186356;BQB=0.444281;MQ0F=0;AF1=0.5;AC1=1;DP4=2,6,4,0;MQ=54;FQ=43.0154;PV4=0.0606061,0.0759763,0.0157488,1 GT:PL 0/1:70,0,189
Scaffold_1 941489 . G A 81.0075 PASS DP=13;VDB=0.119109;SGB=-0.590765;RPB=0.40926;MQB=0.506703;MQSB=0.186356;BQB=0.896474;MQ0F=0;AF1=0.5;AC1=1;DP4=1,6,5,0;MQ=54;FQ=84.0157;PV4=0.0151515,1,0.0600385,1 GT:PL 0/1:111,0,164
Scaffold_1 941500 . T C 62.0073 PASS DP=13;VDB=0.244943;SGB=-0.556411;RPB=0.562708;MQB=0.643095;MQSB=0.356607;BQB=0.924449;MQ0F=0;AF1=0.5;AC1=1;DP4=2,5,4,0;MQ=55;FQ=65.0155;PV4=0.0606061,1,0.120654,1 GT:PL 0/1:92,0,157
Scaffold_1 941508 . G A 73.0074 PASS DP=13;VDB=0.110342;SGB=-0.590765;RPB=0.40926;MQB=0.506703;MQSB=0.253351;BQB=0.331306;MQ0F=0;AF1=0.5;AC1=1;DP4=2,5,5,0;MQ=54;FQ=76.0156;PV4=0.0277778,0.0464439,0.0600385,0.126484 GT:PL 0/1:103,0,195
Scaffold_1 941536 . C A 55.0072 PASS DP=11;VDB=0.102722;SGB=-0.511536;RPB=0.458241;MQB=0.366593;MQSB=0.274945;BQB=0.733186;MQ0F=0;AF1=0.5;AC1=1;DP4=1,6,2,1;MQ=57;FQ=58.0154;PV4=0.183333,1,0.00506536,1 GT:PL 0/1:85,0,167
Scaffold_1 941553 . T C 14.176 PASS DP=11;VDB=0.22;SGB=-0.453602;RPB=0.25;MQB=0;MQSB=0.503877;BQB=0.5;MQ0F=0;AF1=0.49999;AC1=1;DP4=2,6,2,0;MQ=57;FQ=17.1004;PV4=0.133333,1,0,1 GT:PL 0/1:44,0,187
Scaffold_1 941641 . A T 127.008 PASS DP=16;VDB=0.00575495;SGB=-0.636426;RPB=0.143152;MQB=0.378331;MQSB=0.269146;BQB=0.899815;MQ0F=0;AF1=0.5;AC1=1;DP4=2,4,2,5;MQ=54;FQ=129.93;PV4=1,0.153655,0.023126,1 GT:PL 0/1:157,0,174
Scaffold_1 941709 . A T 141.008 PASS DP=10;VDB=0.00575495;SGB=-0.636426;RPB=0.285714;MQB=0.642857;MQSB=0.231146;BQB=0.571429;MQ0F=0;AF1=0.500001;AC1=1;DP4=1,1,2,5;MQ=51;FQ=28.0219;PV4=1,0.210577,0.167606,0.313142 GT:PL 0/1:171,0,55
Scaffold_1 941713 . T A 116.008 PASS DP=10;VDB=0.00324086;SGB=-0.616816;RPB=0.333333;MQB=0.75;MQSB=0.333333;BQB=0.75;MQ0F=0;AF1=0.500031;AC1=1;DP4=1,1,1,5;MQ=53;FQ=12.2797;PV4=0.464286,1,0.221475,0.301823 GT:PL 0/1:146,0,39
Scaffold_1 941737 . A C 96.0077 PASS DP=10;VDB=0.00923447;SGB=-0.590765;RPB=0.300267;MQB=0.750668;MQSB=1;BQB=0.750668;MQ0F=0.1;AF1=0.5;AC1=1;DP4=1,2,0,5;MQ=53;FQ=58.015;PV4=0.375,1,1,0.441445 GT:PL 0/1:126,0,85
Scaffold_1 941746 . G A 55.0072 PASS DP=10;VDB=0.0205346;SGB=-0.556411;RPB=0.162433;MQB=0.89338;MQSB=1;BQB=0.974597;MQ0F=0.1;AF1=0.5;AC1=1;DP4=1,4,0,4;MQ=50;FQ=58.0045;PV4=1,0.440354,1,0.0703512 GT:PL 0/1:85,0,111
Scaffold_1 941851 . C T 15.147 PASS DP=5;VDB=0.26019;SGB=-0.556411;RPB=1;MQB=1;MQSB=1;BQB=1;MQ0F=0.4;AF1=0.500621;AC1=1;DP4=0,1,1,3;MQ=29;FQ=-3.56123;PV4=1,0.153643,0.200149,1 GT:PL 0/1:45,0,26
Scaffold_1 941859 . T C 64.2634 PASS DP=5;VDB=0.480825;SGB=-0.590765;MQSB=1;MQ0F=0.4;AF1=1;AC1=2;DP4=0,0,1,4;MQ=29;FQ=-41.9862 GT:PL 1/1:97,15,0
Scaffold_1 941860 . A G 14.177 PASS DP=5;VDB=0.38;SGB=-0.453602;RPB=0;MQB=0.666667;MQSB=1;BQB=0.166667;MQ0F=0.4;AF1=0.500115;AC1=1;DP4=1,2,0,2;MQ=29;FQ=6.72159;PV4=1,0.0672357,1,1 GT:PL 0/1:44,0,33
Scaffold_1 942006 . C A 32.4619 PASS DP=3;VDB=0.02;SGB=-0.453602;RPB=1;MQB=1;BQB=1;MQ0F=0;AF1=0.829413;AC1=1;DP4=1,0,2,0;MQ=32;FQ=-25.9966;PV4=1,1,1,1 GT:PL 0/1:61,0,1
Scaffold_1 942024 . T C 58.9723 PASS DP=3;VDB=0.121629;SGB=-0.511536;MQ0F=0;AF1=1;AC1=2;DP4=0,0,3,0;MQ=47;FQ=-35.9869 GT:PL 1/1:91,9,0
Scaffold_1 942025 . A T 62.9723 PASS DP=3;VDB=0.121629;SGB=-0.511536;MQ0F=0;AF1=1;AC1=2;DP4=0,0,3,0;MQ=47;FQ=-35.9869 GT:PL 1/1:95,9,0
Scaffold_1 942264 . A G 31.0104 PASS DP=12;VDB=0.193383;SGB=-0.556411;RPB=0.0803868;MQB=0.803868;MQSB=0.716531;BQB=0.200967;MQ0F=0;AF1=0.5;AC1=1;DP4=5,2,3,1;MQ=58;FQ=34.0168;PV4=1,0.02253,0.100197,0.12472 GT:PL 0/1:61,0,205
Scaffold_1 942274 . G A 72.0074 PASS DP=14;VDB=0.161792;SGB=-0.590765;RPB=0.187475;MQB=0.50373;MQSB=0.898397;BQB=0.989343;MQ0F=0;AF1=0.5;AC1=1;DP4=5,3,4,1;MQ=58;FQ=75.0156;PV4=1,0.289551,0.0783378,0.0858752 GT:PL 0/1:102,0,199
Scaffold_1 942327 . A C 109.008 PASS DP=15;VDB=0.200927;SGB=-0.616816;RPB=0.899815;MQB=0.623736;MQSB=0.958048;BQB=0.112477;MQ0F=0;AF1=0.5;AC1=1;DP4=3,4,5,1;MQ=58;FQ=112.014;PV4=0.265734,1,0.116409,1 GT:PL 0/1:139,0,172
Scaffold_1 942378 . A T 88.0076 PASS DP=17;VDB=0.605618;SGB=-0.616816;RPB=0.342303;MQB=0.863243;MQSB=0.960687;BQB=0.976745;MQ0F=0;AF1=0.5;AC1=1;DP4=5,5,6,0;MQ=60;FQ=91.0158;PV4=0.0934066,1,0.103539,0.461211 GT:PL 0/1:118,0,233
Scaffold_1 942403 . G C 68.0074 PASS DP=18;VDB=0.636041;SGB=-0.590765;RPB=0.412539;MQB=0.814433;MQSB=0.951002;BQB=0.703975;MQ0F=0;AF1=0.5;AC1=1;DP4=6,7,5,0;MQ=60;FQ=71.0155;PV4=0.101307,1,0.0542735,0.412394 GT:PL 0/1:98,0,255
Scaffold_1 942413 . G A 35.0083 PASS DP=16;VDB=0.539554;SGB=-0.511536;RPB=0.896649;MQB=0.693041;MQSB=0.927743;BQB=0.505697;MQ0F=0;AF1=0.5;AC1=1;DP4=5,6,3,0;MQ=60;FQ=38.0158;PV4=0.208791,1,0.0253411,1 GT:PL 0/1:65,0,237
Scaffold_1 942502 . C T 48.0072 PASS DP=13;VDB=0.988067;SGB=-0.511536;RPB=0.546855;MQB=0.879351;MQSB=0.623736;BQB=0.447727;MQ0F=0;AF1=0.5;AC1=1;DP4=6,4,1,2;MQ=57;FQ=51.0153;PV4=0.559441,1,0.386074,0.0773324 GT:PL 0/1:78,0,234
Scaffold_1 942523 . G A 16.1143 PASS DP=9;VDB=0.14;SGB=-0.453602;RPB=0.285714;MQB=0.714286;MQSB=0.649731;BQB=0.785714;MQ0F=0;AF1=0.499994;AC1=1;DP4=4,3,0,2;MQ=56;FQ=19.069;PV4=0.444444,1,0.376455,1 GT:PL 0/1:46,0,182
Scaffold_1 942536 . A G 57.0073 PASS DP=11;VDB=0.714437;SGB=-0.556411;RPB=0.763675;MQB=0.200967;MQSB=0.562708;BQB=0.924449;MQ0F=0;AF1=0.5;AC1=1;DP4=4,3,0,4;MQ=56;FQ=60.0154;PV4=0.193939,0.133028,0.00371551,1 GT:PL 0/1:87,0,198
Scaffold_1 942640 . C A 51.0072 PASS DP=14;VDB=0.836818;SGB=-0.590765;RPB=0.83527;MQB=0.011109;MQSB=0.583333;BQB=0.375311;MQ0F=0;AF1=0.5;AC1=1;DP4=2,7,0,5;MQ=53;FQ=54.0154;PV4=0.505495,0.0213607,2.71583e-05,0.0950757 GT:PL 0/1:81,0,214
Scaffold_1 942660 . A G 31.0104 PASS DP=14;VDB=0.45314;SGB=-0.556411;RPB=0.960789;MQB=0.0183156;MQSB=0.666667;BQB=0.33204;MQ0F=0;AF1=0.5;AC1=1;DP4=2,8,0,4;MQ=54;FQ=34.0168;PV4=1,0.0710486,3.20048e-06,0.47198 GT:PL 0/1:61,0,224
Scaffold_1 964650 . G T 38.0077 PASS DP=16;VDB=0.0221621;SGB=-0.511536;RPB=0.879351;MQB=1;MQSB=1;BQB=0.447727;MQ0F=0;AF1=0.5;AC1=1;DP4=3,7,0,3;MQ=60;FQ=41.0155;PV4=0.527972,1,1,1 GT:PL 0/1:68,0,222
Scaffold_1 975078 . C T 25.0205 PASS DP=8;VDB=0.02;SGB=-0.453602;RPB=0.4;MQB=0.5;MQSB=0.810265;BQB=0;MQ0F=0;AF1=0.499999;AC1=1;DP4=1,4,2,0;MQ=59;FQ=28.0219;PV4=0.142857,1,0.0586934,1 GT:PL 0/1:55,0,117
Scaffold_1 975117 . G A 51.0072 PASS DP=8;VDB=0.126715;SGB=-0.511536;RPB=0.861511;MQB=0.861511;MQSB=0.75;BQB=0.574341;MQ0F=0;AF1=0.5;AC1=1;DP4=1,2,3,0;MQ=58;FQ=53.9471;PV4=0.4,0.0580583,0.18695,1 GT:PL 0/1:81,0,99
Scaffold_1 975167 . T G 46.0072 PASS DP=9;VDB=0.348933;SGB=-0.556411;RPB=0.406082;MQB=0.89338;MQSB=1;BQB=0.89338;MQ0F=0;AF1=0.5;AC1=1;DP4=4,1,4,0;MQ=59;FQ=49.0152;PV4=1,0.256387,0.146176,0.146176 GT:PL 0/1:76,0,122
Scaffold_1 975170 . A G 40.0075 PASS DP=9;VDB=0.336489;SGB=-0.511536;RPB=0.810265;MQB=1.01283;MQSB=1;BQB=0.810265;MQ0F=0;AF1=0.5;AC1=1;DP4=3,1,3,0;MQ=60;FQ=43.0151;PV4=1,0.310574,1,1 GT:PL 0/1:70,0,111
Scaffold_1 975184 . A G 33.0091 PASS DP=9;VDB=0.345596;SGB=-0.511536;RPB=0.666667;MQB=1;MQSB=1;BQB=0;MQ0F=0;AF1=0.5;AC1=1;DP4=1,1,3,0;MQ=60;FQ=34.5612;PV4=0.4,0.00787865,1,0.247513 GT:PL 0/1:63,0,67
Scaffold_1 975219 . C G 16.1143 PASS DP=8;VDB=0.941105;SGB=-0.511536;RPB=0.810265;MQB=1.01283;BQB=0.607698;MQ0F=0;AF1=0.499994;AC1=1;DP4=4,0,3,0;MQ=60;FQ=19.0682;PV4=1,0.16007,1,0.165048 GT:PL 0/1:46,0,83
Scaffold_1 975243 . G A 54.0072 PASS DP=7;VDB=0.897278;SGB=-0.511536;RPB=0.607698;MQB=1.01283;BQB=0.202566;MQ0F=0;AF1=0.5;AC1=1;DP4=4,0,3,0;MQ=60;FQ=55.251;PV4=1,1,1,0.441406 GT:PL 0/1:84,0,87
Scaffold_1 975278 . A G 85.0076 PASS DP=10;VDB=0.0550934;SGB=-0.556411;RPB=0.62023;MQB=0.992367;MQSB=1;BQB=0.868321;MQ0F=0;AF1=0.5;AC1=1;DP4=4,0,3,1;MQ=60;FQ=81.0424;PV4=1,0.324737,1,1 GT:PL 0/1:115,0,109
Scaffold_1 975299 . A T 105.008 PASS DP=10;VDB=0.0718299;SGB=-0.590765;RPB=0.89338;MQB=0.974597;MQSB=1;BQB=0.89338;MQ0F=0;AF1=0.5;AC1=1;DP4=3,1,4,1;MQ=60;FQ=82.0048;PV4=1,1,1,0.203542 GT:PL 0/1:135,0,109
Scaffold_1 975331 . T A 134.008 PASS DP=12;VDB=0.204971;SGB=-0.636426;RPB=0.896474;MQB=0.95494;MQSB=1;BQB=0.95494;MQ0F=0;AF1=0.5;AC1=1;DP4=4,1,5,2;MQ=60;FQ=84.0157;PV4=1,1,1,1 GT:PL 0/1:164,0,111
Scaffold_1 975336 . C T 126.008 PASS DP=12;VDB=0.236588;SGB=-0.616816;RPB=0.895781;MQB=1.00775;MQSB=1;BQB=0.727822;MQ0F=0;AF1=0.5;AC1=1;DP4=3,1,5,1;MQ=60;FQ=76.0156;PV4=1,1,1,1 GT:PL 0/1:156,0,103
Scaffold_1 975339 . C A 146.008 PASS DP=12;VDB=0.190922;SGB=-0.636426;RPB=0.896474;MQB=0.95494;MQSB=1;BQB=0.896474;MQ0F=0;AF1=0.5;AC1=1;DP4=4,1,5,2;MQ=60;FQ=91.0158;PV4=1,1,1,1 GT:PL 0/1:176,0,118
Scaffold_1 975418 . C T 199.009 PASS DP=16;VDB=0.690639;SGB=-0.670168;RPB=1;MQB=1;MQSB=1;BQB=0.161621;MQ0F=0;AF1=0.5;AC1=1;DP4=1,3,7,3;MQ=60;FQ=53.0153;PV4=0.244755,1,1,1 GT:PL 0/1:229,0,80
Scaffold_1 975432 . G T 161.009 PASS DP=13;VDB=0.322751;SGB=-0.662043;RPB=0.857404;MQB=1;MQSB=1;BQB=0.898672;MQ0F=0;AF1=0.5;AC1=1;DP4=2,1,6,3;MQ=60;FQ=42.0155;PV4=1,0.244935,1,0.294225 GT:PL 0/1:191,0,69
Scaffold_1 975461 . G C 178.009 PASS DP=16;VDB=0.331571;SGB=-0.662043;RPB=0.953497;MQB=1;MQSB=0.961166;BQB=0.785785;MQ0F=0;AF1=0.5;AC1=1;DP4=1,3,5,4;MQ=60;FQ=68.0155;PV4=0.559441,0.431798,1,1 GT:PL 0/1:208,0,95
Scaffold_1 975496 . C A 207.009 PASS DP=15;VDB=0.172586;SGB=-0.662043;RPB=0.096972;MQB=1;MQSB=0.961166;BQB=0.558035;MQ0F=0;AF1=0.5;AC1=1;DP4=2,2,4,5;MQ=60;FQ=79.0156;PV4=1,1,1,1 GT:PL 0/1:237,0,106
Scaffold_1 975515 . T C 211.009 PASS DP=20;VDB=0.945331;SGB=-0.670168;RPB=0.342519;MQB=1;MQSB=1;BQB=0.765017;MQ0F=0;AF1=0.5;AC1=1;DP4=3,4,5,5;MQ=60;FQ=138.016;PV4=1,1,1,1 GT:PL 0/1:241,0,165
Scaffold_1 975546 . A T 171.009 PASS DP=21;VDB=0.530978;SGB=-0.662043;RPB=0.984526;MQB=1;MQSB=1;BQB=0.848133;MQ0F=0;AF1=0.5;AC1=1;DP4=6,3,7,2;MQ=60;FQ=173.378;PV4=1,1,1,1 GT:PL 0/1:201,0,209
Scaffold_1 975647 . C A 225.009 PASS DP=31;VDB=0.542044;SGB=-0.691153;RPB=0.945235;MQB=1;MQSB=1;BQB=0.772116;MQ0F=0;AF1=0.5;AC1=1;DP4=6,4,14,4;MQ=60;FQ=187.017;PV4=0.400426,0.424178,1,1 GT:PL 0/1:255,0,214
Scaffold_1 975667 . G T 211.009 PASS DP=24;VDB=0.268133;SGB=-0.680642;RPB=0.334958;MQB=1;MQSB=1;BQB=0.914584;MQ0F=0;AF1=0.5;AC1=1;DP4=5,2,9,3;MQ=60;FQ=127.016;PV4=1,1,1,1 GT:PL 0/1:241,0,154
Scaffold_1 975712 . A G 188.009 PASS DP=22;VDB=0.149496;SGB=-0.670168;RPB=0.153355;MQB=1;MQSB=1;BQB=0.869825;MQ0F=0;AF1=0.5;AC1=1;DP4=7,4,5,5;MQ=60;FQ=190.995;PV4=0.669921,0.148509,1,1 GT:PL 0/1:218,0,241
Scaffold_1 975779 . C G 154.008 PASS DP=24;VDB=0.726608;SGB=-0.651104;RPB=0.936543;MQB=1;MQSB=1;BQB=0.8274;MQ0F=0;AF1=0.5;AC1=1;DP4=7,6,4,4;MQ=60;FQ=157.017;PV4=1,1,1,1 GT:PL 0/1:184,0,255
Scaffold_1 975789 . T A 79.0075 PASS DP=21;VDB=0.206846;SGB=-0.590765;RPB=0.978023;MQB=1;MQSB=1;BQB=0.99446;MQ0F=0;AF1=0.5;AC1=1;DP4=6,6,3,2;MQ=60;FQ=82.0157;PV4=1,0.323847,1,1 GT:PL 0/1:109,0,255
Scaffold_1 975791 . A T 90.0077 PASS DP=20;VDB=0.148314;SGB=-0.590765;RPB=1;MQB=1;MQSB=1;BQB=1;MQ0F=0;AF1=0.5;AC1=1;DP4=6,4,3,2;MQ=60;FQ=93.0158;PV4=1,1,1,1 GT:PL 0/1:120,0,222
Scaffold_1 975841 . C A 98.0078 PASS DP=25;VDB=0.715796;SGB=-0.616816;RPB=0.743365;MQB=1;MQSB=1;BQB=0.970422;MQ0F=0;AF1=0.5;AC1=1;DP4=7,10,3,3;MQ=60;FQ=101.016;PV4=1,1,1,1 GT:PL 0/1:128,0,255
Scaffold_1 975981 . C T 171.009 PASS DP=24;VDB=0.917907;SGB=-0.686358;RPB=0.892142;MQB=1;MQSB=1;BQB=0.450604;MQ0F=0;AF1=0.5;AC1=1;DP4=2,6,1,13;MQ=60;FQ=167.044;PV4=0.527273,0.0711314,1,0.255847 GT:PL 0/1:201,0,195
Scaffold_1 976004 . G A 209.009 PASS DP=23;VDB=0.790183;SGB=-0.686358;RPB=0.393893;MQB=1;MQSB=1;BQB=0.592107;MQ0F=0;AF1=0.5;AC1=1;DP4=2,6,2,12;MQ=60;FQ=168.017;PV4=0.601914,0.134392,1,0.23317 GT:PL 0/1:239,0,195
Scaffold_1 976131 . A C 70.0074 PASS DP=14;VDB=0.0277111;SGB=-0.556411;RPB=0.039122;MQB=0.785785;MQSB=0.899815;BQB=0.898397;MQ0F=0;AF1=0.5;AC1=1;DP4=5,4,2,2;MQ=59;FQ=73.0156;PV4=1,0.19256,0.069705,0.128592 GT:PL 0/1:100,0,250
Scaffold_1 976636 . T G 54.0072 PASS DP=8;VDB=0.5;SGB=-0.511536;RPB=0.810265;MQB=0.810265;MQSB=1;BQB=0.202566;MQ0F=0;AF1=0.5;AC1=1;DP4=3,1,3,0;MQ=58;FQ=57.0045;PV4=1,1,0.142795,1 GT:PL 0/1:84,0,110
Scaffold_1 976643 . G A 41.0074 PASS DP=8;VDB=0.5;SGB=-0.511536;RPB=0.810265;MQB=0.810265;MQSB=1;BQB=1.01283;MQ0F=0;AF1=0.5;AC1=1;DP4=3,1,3,0;MQ=58;FQ=44.0145;PV4=1,0.395921,0.142795,1 GT:PL 0/1:71,0,108
Scaffold_1 976656 . T A 49.0072 PASS DP=9;VDB=0.5;SGB=-0.511536;RPB=0.900802;MQB=0.750668;MQSB=0.833333;BQB=0.900802;MQ0F=0;AF1=0.5;AC1=1;DP4=3,2,3,0;MQ=58;FQ=52.0153;PV4=0.464286,1,0.109972,1 GT:PL 0/1:79,0,140
Scaffold_1 976672 . T G 19.061 PASS DP=9;VDB=0.32;SGB=-0.453602;RPB=0.666667;MQB=1;MQSB=0.992367;BQB=0.583333;MQ0F=0;AF1=0.499997;AC1=1;DP4=2,4,2,0;MQ=60;FQ=22.0421;PV4=0.428571,1,1,1 GT:PL 0/1:49,0,152
Scaffold_1 976695 . G A 20.0499 PASS DP=10;VDB=0.32;SGB=-0.453602;RPB=0.75;MQB=1;MQSB=0.861511;BQB=0;MQ0F=0;AF1=0.499998;AC1=1;DP4=1,3,2,0;MQ=60;FQ=23.015;PV4=0.4,1,1,1 GT:PL 0/1:50,0,73
Scaffold_1 976705 . C A 22.0341 PASS DP=11;VDB=0.36;SGB=-0.453602;RPB=0.6;MQB=1;MQSB=1.01283;BQB=0.1;MQ0F=0;AF1=0.499998;AC1=1;DP4=1,4,2,0;MQ=60;FQ=25.0286;PV4=0.142857,1,1,1 GT:PL 0/1:52,0,102
Scaffold_1 976739 . T C 34.0087 PASS DP=12;VDB=0.771809;SGB=-0.511536;RPB=0.809011;MQB=0.924584;MQSB=0.974597;BQB=0.346719;MQ0F=0;AF1=0.5;AC1=1;DP4=2,4,2,1;MQ=60;FQ=37.016;PV4=0.52381,0.0637751,1,1 GT:PL 0/1:64,0,168
Scaffold_1 976743 . T G 16.1143 PASS DP=13;VDB=0.82;SGB=-0.453602;RPB=1;MQB=1;MQSB=1.00775;BQB=0.375;MQ0F=0;AF1=0.499994;AC1=1;DP4=2,6,2,0;MQ=60;FQ=19.069;PV4=0.133333,1,1,1 GT:PL 0/1:46,0,193
Scaffold_1 976831 . T A 93.0077 PASS DP=13;VDB=0.26019;SGB=-0.556411;RPB=0.272074;MQB=1;MQSB=0.982603;BQB=0.646425;MQ0F=0;AF1=0.5;AC1=1;DP4=4,4,2,2;MQ=60;FQ=96.0159;PV4=1,1,1,1 GT:PL 0/1:123,0,202
Scaffold_1 976838 . A C 97.0078 PASS DP=12;VDB=0.249971;SGB=-0.556411;RPB=0.0803868;MQB=0.964642;MQSB=0.950952;BQB=0.924449;MQ0F=0;AF1=0.5;AC1=1;DP4=4,3,2,2;MQ=60;FQ=100.016;PV4=1,1,1,0.279042 GT:PL 0/1:127,0,180
Scaffold_1 983221 . C T 24.144 PASS DP=20;VDB=0.0498254;SGB=-0.636426;RPB=0.0018363;MQB=0.0740088;MQSB=0.0686612;BQB=0.0894312;MQ0F=0.65;AF1=1;AC1=2;DP4=1,11,4,3;MQ=14;FQ=-27.9926;PV4=0.0379257,1,1,0.147747 GT:PL 1/1:53,1,0
Scaffold_1 983377 . T A 12.2733 PASS DP=8;VDB=0.23997;SGB=-0.556411;RPB=0.202566;MQB=0.810265;MQSB=1;BQB=0.607698;MQ0F=0.25;AF1=0.500142;AC1=1;DP4=1,2,0,4;MQ=22;FQ=5.89344;PV4=0.428571,1,0.432303,0.101817 GT:PL 0/1:42,0,32
Scaffold_1 983903 . C A 24.0241 PASS DP=8;VDB=0.02;SGB=-0.453602;RPB=0.5;MQB=0.5;MQSB=0.75;BQB=0.5;MQ0F=0.125;AF1=0.499999;AC1=1;DP4=2,2,0,2;MQ=42;FQ=27.0235;PV4=0.466667,0.0889039,1,1 GT:PL 0/1:54,0,101
Scaffold_1 985398 . C T 40.5407 PASS DP=19;VDB=0.219617;SGB=-0.636426;RPB=0.00575813;MQB=0.040184;MQSB=0.42089;BQB=0.999108;MQ0F=0.736842;AF1=1;AC1=2;DP4=8,4,5,2;MQ=17;FQ=-30.9892;PV4=1,1,1,1 GT:PL 1/1:71,4,0
Scaffold_1 985526 . G A 10.5275 PASS DP=21;VDB=0.154358;SGB=-0.511536;RPB=0.0301974;MQB=0.0301974;MQSB=0.591555;BQB=0.525788;MQ0F=0.809524;AF1=1;AC1=2;DP4=7,7,0,3;MQ=15;FQ=-31.9889;PV4=0.227941,1,1,1 GT:PL 1/1:41,5,0
Scaffold_1 985530 . G A 10.2218 PASS DP=22;VDB=0.421803;SGB=-0.556411;RPB=0.110251;MQB=0.0795595;MQSB=0.61207;BQB=0.809572;MQ0F=0.818182;AF1=1;AC1=2;DP4=8,7,0,4;MQ=14;FQ=-36.987;PV4=0.103199,0.303185,1,1 GT:PL 1/1:42,10,0
Scaffold_1 985540 . G A 25.5249 PASS DP=24;VDB=0.730433;SGB=-0.556411;RPB=0.150358;MQB=0.0086517;MQSB=0.463369;BQB=0.870245;MQ0F=0.833333;AF1=1;AC1=2;DP4=10,9,0,4;MQ=15;FQ=-38.9864;PV4=0.104461,1,1,0.260683 GT:PL 1/1:58,12,0
Scaffold_1 993499 . T C 32.0097 PASS DP=12;VDB=0.0279572;SGB=-0.511536;RPB=0.274945;MQB=0.0916482;MQSB=0.641538;BQB=0.366593;MQ0F=0;AF1=0.5;AC1=1;DP4=4,3,3,0;MQ=54;FQ=35.0165;PV4=0.475,1,2.28772e-05,1 GT:PL 0/1:62,0,187
Scaffold_1 993504 . A C 27.0155 PASS DP=12;VDB=0.0312982;SGB=-0.511536;RPB=0.382304;MQB=0.0443614;MQSB=0.397295;BQB=0.707404;MQ0F=0;AF1=0.499999;AC1=1;DP4=5,4,3,0;MQ=54;FQ=30.0194;PV4=0.490909,1,8.29221e-05,1 GT:PL 0/1:57,0,223
Scaffold_1 993508 . G A 24.0241 PASS DP=12;VDB=0.0295886;SGB=-0.511536;RPB=0.432745;MQB=0.0443614;MQSB=0.397295;BQB=0.596251;MQ0F=0;AF1=0.499999;AC1=1;DP4=5,4,3,0;MQ=54;FQ=27.0236;PV4=0.490909,1,8.29221e-05,1 GT:PL 0/1:54,0,214
Scaffold_1 993520 . A C 14.176 PASS DP=13;VDB=0.0330887;SGB=-0.511536;RPB=0.748798;MQB=0.040184;MQSB=0.304076;BQB=0.649117;MQ0F=0;AF1=0.49999;AC1=1;DP4=6,4,3,0;MQ=54;FQ=17.1004;PV4=0.496504,0.403285,3.62786e-05,1 GT:PL 0/1:44,0,231
Scaffold_1 993738 . C T 19.061 PASS DP=8;VDB=0.206307;SGB=-0.511536;RPB=0.405132;MQB=0.202566;MQSB=1.01283;BQB=1.01283;MQ0F=0;AF1=0.499997;AC1=1;DP4=2,2,1,2;MQ=49;FQ=22.0421;PV4=1,0.273778,0.00252333,0.301102 GT:PL 0/1:49,0,123
Scaffold_1 993761 . T A 21.0411 PASS DP=8;VDB=0.160409;SGB=-0.556411;RPB=0.868321;MQB=0.124046;MQSB=0.900802;BQB=0.62023;MQ0F=0;AF1=0.499998;AC1=1;DP4=2,2,1,3;MQ=48;FQ=24.0321;PV4=1,0.108567,0.00264357,1 GT:PL 0/1:51,0,112
Scaffold_1 993791 . G A 44.0073 PASS DP=8;VDB=0.160409;SGB=-0.556411;RPB=0.62023;MQB=0.124046;MQSB=0.75;BQB=0.868321;MQ0F=0;AF1=0.5;AC1=1;DP4=1,3,1,3;MQ=48;FQ=47.0146;PV4=1,1,0.00264357,1 GT:PL 0/1:74,0,112
Scaffold_1 993807 . G T 37.0079 PASS DP=9;VDB=0.152777;SGB=-0.556411;RPB=0.487298;MQB=0.0812164;MQSB=0.714286;BQB=0.730948;MQ0F=0;AF1=0.5;AC1=1;DP4=1,4,1,3;MQ=49;FQ=40.0152;PV4=1,1,0.000920865,1 GT:PL 0/1:67,0,107
Scaffold_1 996626 . T G 46.0072 PASS DP=10;VDB=0.0249187;SGB=-0.511536;RPB=0.115573;MQB=0.115573;MQSB=0.162433;BQB=0.462292;MQ0F=0;AF1=0.5;AC1=1;DP4=1,5,3,0;MQ=56;FQ=49.0153;PV4=0.047619,1,0.000814679,0.0183646 GT:PL 0/1:76,0,132
Scaffold_1 996631 . A G 45.0072 PASS DP=10;VDB=0.0249187;SGB=-0.511536;RPB=0.0916482;MQB=0.0916482;MQSB=0.333321;BQB=0.366593;MQ0F=0;AF1=0.5;AC1=1;DP4=2,5,3,0;MQ=56;FQ=48.0153;PV4=0.166667,1,0.000308614,0.0356428 GT:PL 0/1:75,0,169
Scaffold_1 996649 . G A 47.0072 PASS DP=10;VDB=0.0312982;SGB=-0.511536;RPB=0.115573;MQB=0.115573;MQSB=0.162433;BQB=0.809011;MQ0F=0;AF1=0.5;AC1=1;DP4=1,5,3,0;MQ=56;FQ=50.0153;PV4=0.047619,1,0.000814679,1 GT:PL 0/1:77,0,154
Scaffold_1 996657 . G A 27.0155 PASS DP=10;VDB=0.036923;SGB=-0.511536;RPB=0.115573;MQB=0.115573;MQSB=0.162433;BQB=0.462292;MQ0F=0;AF1=0.499999;AC1=1;DP4=1,5,3,0;MQ=56;FQ=30.0194;PV4=0.047619,0.0152684,0.000814679,1 GT:PL 0/1:57,0,162
Scaffold_1 996682 . T C 20.0499 PASS DP=9;VDB=0.02;SGB=-0.453602;RPB=0;MQB=0;MQSB=0.300267;BQB=0.5;MQ0F=0;AF1=0.499997;AC1=1;DP4=1,5,2,0;MQ=57;FQ=23.0366;PV4=0.107143,1,0.000912026,1 GT:PL 0/1:50,0,143
Scaffold_1 996683 . G A 44.0073 PASS DP=9;VDB=0.045681;SGB=-0.511536;RPB=0.115573;MQB=0.115573;MQSB=0.162433;BQB=0.924584;MQ0F=0;AF1=0.5;AC1=1;DP4=1,5,3,0;MQ=56;FQ=47.0153;PV4=0.047619,1,0.000814679,1 GT:PL 0/1:74,0,145
Scaffold_1 996699 . A G 47.0072 PASS DP=8;VDB=0.0588947;SGB=-0.511536;RPB=0.300267;MQB=0.150134;MQSB=0.150134;BQB=0.450401;MQ0F=0;AF1=0.5;AC1=1;DP4=0,5,3,0;MQ=56;FQ=50.0119;PV4=0.0178571,1,0.002164,1 GT:PL 0/1:77,0,108
Scaffold_1 996733 . A G 23.0285 PASS DP=8;VDB=0.06;SGB=-0.453602;RPB=1;MQB=0;MQSB=0.607698;BQB=1;MQ0F=0;AF1=0.499999;AC1=1;DP4=2,3,2,0;MQ=56;FQ=26.0258;PV4=0.428571,1,0.00261069,1 GT:PL 0/1:53,0,159
Scaffold_1 996740 . T C 17.0924 PASS DP=7;VDB=0.06;SGB=-0.453602;RPB=1;MQB=0;MQSB=0.607698;BQB=0.5;MQ0F=0;AF1=0.499995;AC1=1;DP4=2,3,2,0;MQ=56;FQ=20.058;PV4=0.428571,0.0586934,0.00261069,1 GT:PL 0/1:47,0,159
Scaffold_1 996742 . G A 23.0285 PASS DP=7;VDB=0.06;SGB=-0.453602;RPB=1;MQB=0;MQSB=0.607698;BQB=0.8;MQ0F=0;AF1=0.499999;AC1=1;DP4=2,3,2,0;MQ=56;FQ=26.0258;PV4=0.428571,1,0.00261069,1 GT:PL 0/1:53,0,155
Scaffold_1 996743 . C A 17.0924 PASS DP=7;VDB=0.06;SGB=-0.453602;RPB=1;MQB=0;MQSB=0.607698;BQB=0.6;MQ0F=0;AF1=0.499995;AC1=1;DP4=2,3,2,0;MQ=56;FQ=20.058;PV4=0.428571,0.116786,0.00261069,1 GT:PL 0/1:47,0,155
Scaffold_1 996976 . A G 61.021 PASS DP=7;VDB=0.0846985;SGB=-0.616816;RPB=1;MQB=1;MQSB=0.810265;BQB=1;MQ0F=0;AF1=0.501582;AC1=1;DP4=1,0,3,3;MQ=38;FQ=-6.18227;PV4=1,0.238206,0.0655674,0.290834 GT:PL 0/1:91,0,22
Scaffold_1 996984 . G T 60.0073 PASS DP=7;VDB=0.100421;SGB=-0.556411;RPB=1;MQB=0.25;MQSB=0.861511;BQB=0.5;MQ0F=0;AF1=0.500006;AC1=1;DP4=2,0,1,3;MQ=41;FQ=19.0689;PV4=0.4,1,0.124121,1 GT:PL 0/1:90,0,46
Scaffold_1 996988 . G T 59.0073 PASS DP=7;VDB=0.112085;SGB=-0.556411;RPB=1;MQB=0.25;MQSB=0.861511;BQB=0.75;MQ0F=0;AF1=0.5;AC1=1;DP4=2,0,1,3;MQ=41;FQ=30.0166;PV4=0.4,0.270735,0.124121,1 GT:PL 0/1:89,0,57
Scaffold_1 997001 . A G 38.0104 PASS DP=4;VDB=0.126715;SGB=-0.511536;RPB=1;MQB=1;MQSB=1;BQB=1;MQ0F=0;AF1=0.500315;AC1=1;DP4=1,0,1,2;MQ=41;FQ=4.13313;PV4=1,0.333333,0.147089,0.333333 GT:PL 0/1:68,0,29
Scaffold_1 997003 . T C 36.0108 PASS DP=5;VDB=0.131948;SGB=-0.511536;RPB=1;MQB=1;MQSB=1;BQB=1;MQ0F=0;AF1=0.500315;AC1=1;DP4=1,0,1,2;MQ=41;FQ=4.13293;PV4=1,0.333333,0.147089,0.333333 GT:PL 0/1:66,0,29
Scaffold_1 997308 . G T 19.061 PASS DP=10;VDB=0.02;SGB=-0.453602;RPB=0.571429;MQB=0.714286;MQSB=0.649731;BQB=0.571429;MQ0F=0;AF1=0.499997;AC1=1;DP4=5,2,0,2;MQ=55;FQ=22.0421;PV4=0.166667,1,1,1 GT:PL 0/1:49,0,171
Scaffold_1 998609 . G A 124.133 PASS DP=6;VDB=0.0769344;SGB=-0.616816;MQSB=0.5;MQ0F=0.166667;AF1=1;AC1=2;DP4=0,0,2,4;MQ=55;FQ=-44.9861 GT:PL 1/1:157,18,0
Scaffold_1 998618 . G A 117.79 PASS DP=6;VDB=0.0385499;SGB=-0.590765;RPB=1;MQB=1;MQSB=0.5;BQB=1;MQ0F=0.166667;AF1=1;AC1=2;DP4=1,0,1,4;MQ=55;FQ=-36.9867;PV4=0.333333,0.352,1,0.17995 GT:PL 1/1:150,10,0
Scaffold_1 998843 . C G 57.1254 PASS DP=4;VDB=0.878371;SGB=-0.511536;RPB=1;MQB=1;MQSB=1;BQB=1;MQ0F=0.25;AF1=1;AC1=2;DP4=0,1,1,2;MQ=39;FQ=-31.9885;PV4=1,0.224071,1,1 GT:PL 1/1:88,5,0
Scaffold_1 999046 . C T 37.5136 PASS DP=4;VDB=0.794163;SGB=-0.556411;MQSB=1;MQ0F=0;AF1=1;AC1=2;DP4=0,0,1,3;MQ=26;FQ=-38.9864 GT:PL 1/1:70,12,0
Scaffold_1 999130 . T C 92.2637 PASS DP=6;VDB=0.516921;SGB=-0.590765;MQSB=1;MQ0F=0;AF1=1;AC1=2;DP4=0,0,4,1;MQ=36;FQ=-41.9862 GT:PL 1/1:125,15,0
Scaffold_1 999144 . T G 148.134 PASS DP=7;VDB=0.0959456;SGB=-0.616816;MQSB=0;MQ0F=0;AF1=1;AC1=2;DP4=0,0,4,2;MQ=42;FQ=-44.9861 GT:PL 1/1:181,18,0
Scaffold_1 999172 . T A 133.066 PASS DP=8;VDB=0.266982;SGB=-0.636426;MQSB=0;MQ0F=0;AF1=1;AC1=2;DP4=0,0,5,2;MQ=45;FQ=-47.986 GT:PL 1/1:166,21,0
Scaffold_1 1000270 . G A 106.008 PASS DP=26;VDB=0.693968;SGB=-0.651104;RPB=0.303735;MQB=0.0321904;MQSB=0.415821;BQB=0.317569;MQ0F=0.230769;AF1=0.5;AC1=1;DP4=15,2,5,3;MQ=29;FQ=49.0153;PV4=0.283267,1,1,1 GT:PL 0/1:136,0,76