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Scaffold_1 9756 . G A 20.0499 PASS DP=7;VDB=0.02;SGB=-0.453602;RPB=0;MQB=1;MQSB=1;BQB=0.875;MQ0F=0;AF1=0.499997;AC1=1;DP4=0,4,2,0;MQ=60;FQ=23.0366;PV4=0.0666667,0.344751,1,1 GT:PL 0/1:50,0,104
Scaffold_1 10928 . C A 28.0137 PASS DP=6;VDB=0.02;SGB=-0.453602;RPB=1;MQB=1;MQSB=0.861511;BQB=0.75;MQ0F=0;AF1=0.5;AC1=1;DP4=1,3,2,0;MQ=60;FQ=31.0185;PV4=0.4,1,1,1 GT:PL 0/1:58,0,119
Scaffold_1 11936 . T C 36.0081 PASS DP=8;VDB=0.0249187;SGB=-0.511536;RPB=0.450401;MQB=0.150134;MQSB=1;BQB=0.750668;MQ0F=0;AF1=0.5;AC1=1;DP4=4,1,3,0;MQ=52;FQ=39.0157;PV4=1,1,0.000238743,1 GT:PL 0/1:66,0,133
Scaffold_1 11942 . G A 41.0074 PASS DP=7;VDB=0.0249187;SGB=-0.511536;RPB=0.607698;MQB=0.202566;BQB=0.607698;MQ0F=0;AF1=0.5;AC1=1;DP4=4,0,3,0;MQ=51;FQ=44.0045;PV4=1,1,0.000939668,1 GT:PL 0/1:71,0,97
Scaffold_1 11958 . G C 14.176 PASS DP=11;VDB=0.02;SGB=-0.453602;RPB=0.5;MQB=0;BQB=0.5;MQ0F=0;AF1=0.49999;AC1=1;DP4=8,0,2,0;MQ=57;FQ=17.1004;PV4=1,1,0,1 GT:PL 0/1:44,0,149
Scaffold_1 11960 . T C 17.0924 PASS DP=11;VDB=0.02;SGB=-0.453602;RPB=0.571429;MQB=0;BQB=0.428571;MQ0F=0;AF1=0.499995;AC1=1;DP4=7,0,2,0;MQ=56;FQ=20.058;PV4=1,1,0,1 GT:PL 0/1:47,0,132
Scaffold_1 11987 . C T 18.0749 PASS DP=13;VDB=0.0312982;SGB=-0.511536;RPB=0.127819;MQB=0.040184;MQSB=0.727273;BQB=0.314383;MQ0F=0;AF1=0.499996;AC1=1;DP4=8,2,3,0;MQ=55;FQ=21.0492;PV4=1,0.0108862,2.79111e-07,1 GT:PL 0/1:48,0,224
Scaffold_1 12020 . T C 21.0411 PASS DP=12;VDB=0.0389723;SGB=-0.511536;RPB=0.0443614;MQB=0.0443614;MQSB=0.7;BQB=0.707404;MQ0F=0;AF1=0.499998;AC1=1;DP4=7,2,3,0;MQ=55;FQ=24.0321;PV4=1,0.300246,1.06745e-06,1 GT:PL 0/1:51,0,202
Scaffold_1 12325 . T C 10.42 PASS DP=13;VDB=0.02;SGB=-0.453602;RPB=0.4;MQB=0;MQSB=0.760054;BQB=0.6;MQ0F=0;AF1=0.499975;AC1=1;DP4=5,5,0,2;MQ=59;FQ=13.2265;PV4=0.469697,1,0,1 GT:PL 0/1:40,0,242
Scaffold_1 12337 . G A 30.0112 PASS DP=11;VDB=0.0649539;SGB=-0.511536;RPB=0.458241;MQB=0.0916482;MQSB=0.503877;BQB=0.641538;MQ0F=0;AF1=0.5;AC1=1;DP4=4,3,0,3;MQ=56;FQ=33.0172;PV4=0.2,0.197513,0.0132892,1 GT:PL 0/1:60,0,189
Scaffold_1 12349 . G A 27.0155 PASS DP=13;VDB=0.0532881;SGB=-0.511536;RPB=0.879351;MQB=0.040184;MQSB=0.470358;BQB=0.748798;MQ0F=0;AF1=0.499999;AC1=1;DP4=6,4,0,3;MQ=57;FQ=30.0194;PV4=0.192308,1,0.00333446,1 GT:PL 0/1:57,0,241
Scaffold_1 12352 . T G 24.0241 PASS DP=14;VDB=0.0532881;SGB=-0.511536;RPB=0.973096;MQB=0.0368832;MQSB=0.428703;BQB=0.693041;MQ0F=0;AF1=0.499999;AC1=1;DP4=7,4,0,3;MQ=57;FQ=27.0236;PV4=0.192308,1,0.00211597,1 GT:PL 0/1:54,0,234
Scaffold_1 12369 . T A 20.0499 PASS DP=14;VDB=0.0481132;SGB=-0.511536;RPB=0.693041;MQB=0.0368832;MQSB=0.301194;BQB=0.505697;MQ0F=0;AF1=0.499997;AC1=1;DP4=8,3,0,3;MQ=57;FQ=23.0366;PV4=0.0549451,1,0.00211597,1 GT:PL 0/1:50,0,241
Scaffold_1 12399 . C T 24.0241 PASS DP=14;VDB=0.0349627;SGB=-0.511536;RPB=0.505697;MQB=0.0368832;MQSB=0.197899;BQB=0.973096;MQ0F=0;AF1=0.499999;AC1=1;DP4=9,2,0,3;MQ=57;FQ=27.0236;PV4=0.0274725,1,0.00211597,1 GT:PL 0/1:54,0,230
Scaffold_1 12400 . C T 24.0241 PASS DP=14;VDB=0.0349627;SGB=-0.511536;RPB=0.505697;MQB=0.0368832;MQSB=0.197899;BQB=0.896649;MQ0F=0;AF1=0.499999;AC1=1;DP4=9,2,0,3;MQ=57;FQ=27.0236;PV4=0.0274725,1,0.00211597,1 GT:PL 0/1:54,0,229
Scaffold_1 12401 . A G 24.0241 PASS DP=14;VDB=0.0349627;SGB=-0.511536;RPB=0.505697;MQB=0.0368832;MQSB=0.197899;BQB=0.973096;MQ0F=0;AF1=0.499999;AC1=1;DP4=9,2,0,3;MQ=57;FQ=27.0236;PV4=0.0274725,1,0.00211597,1 GT:PL 0/1:54,0,228
Scaffold_1 12421 . A G 27.0155 PASS DP=13;VDB=0.0279572;SGB=-0.511536;RPB=0.314383;MQB=0.040184;MQSB=0.213769;BQB=0.879351;MQ0F=0;AF1=0.499999;AC1=1;DP4=8,2,0,3;MQ=57;FQ=30.0194;PV4=0.034965,1,0.00333446,0.346053 GT:PL 0/1:57,0,211
Scaffold_1 12433 . T A 32.0097 PASS DP=12;VDB=0.0221621;SGB=-0.511536;RPB=0.184981;MQB=0.0497871;MQSB=0.200967;BQB=0.877913;MQ0F=0;AF1=0.5;AC1=1;DP4=7,1,0,3;MQ=57;FQ=35.0165;PV4=0.0242424,0.238063,0.00835214,0.0559867 GT:PL 0/1:62,0,185
Scaffold_1 26483 . T G 89.2637 PASS DP=33;VDB=0.626249;SGB=-0.693097;RPB=0.882064;MQB=0.867911;MQSB=0.610852;BQB=0.323223;MQ0F=0.0606061;AF1=1;AC1=2;DP4=0,3,4,26;MQ=20;FQ=-41.9862;PV4=1,0.0924604,0.169211,1 GT:PL 1/1:122,15,0
Scaffold_1 27384 . G C 41.7648 PASS DP=2;VDB=0.02;SGB=-0.453602;MQ0F=0;AF1=1;AC1=2;DP4=0,0,2,0;MQ=40;FQ=-32.988 GT:PL 1/1:73,6,0
Scaffold_1 37924 . G A 16.1143 PASS DP=10;VDB=0.02;SGB=-0.453602;RPB=0;MQB=0;MQSB=0.0916482;BQB=1;MQ0F=0;AF1=0.499994;AC1=1;DP4=7,1,0,2;MQ=54;FQ=19.069;PV4=0.0666667,1,0.0506819,0.00997219 GT:PL 0/1:46,0,187
Scaffold_1 44827 . G T 35.0083 PASS DP=13;VDB=0.0221621;SGB=-0.511536;RPB=0.0740088;MQB=1;MQSB=0.961166;BQB=1;MQ0F=0;AF1=0.5;AC1=1;DP4=6,4,0,3;MQ=60;FQ=38.0158;PV4=0.192308,1,1,1 GT:PL 0/1:65,0,243
Scaffold_1 47735 . C T 25.0205 PASS DP=9;VDB=0.02;SGB=-0.453602;RPB=0;MQB=1;MQSB=1;BQB=0.8;MQ0F=0;AF1=0.499999;AC1=1;DP4=3,2,2,0;MQ=60;FQ=28.0219;PV4=1,0.288066,1,0.0573971 GT:PL 0/1:55,0,177
Scaffold_1 49689 . G A 80.0076 PASS DP=8;VDB=0.863154;SGB=-0.590765;RPB=0.8;MQB=0.6;MQSB=0.8;BQB=0.2;MQ0F=0;AF1=0.500013;AC1=1;DP4=2,0,3,2;MQ=47;FQ=16.1222;PV4=1,0.092899,1,0.205553 GT:PL 0/1:110,0,43
Scaffold_1 49701 . A G 86.0076 PASS DP=9;VDB=0.855578;SGB=-0.590765;RPB=0.600535;MQB=0.600535;MQSB=0.900802;BQB=0.750668;MQ0F=0;AF1=0.5;AC1=1;DP4=2,1,3,2;MQ=45;FQ=44.0152;PV4=1,0.179025,1,0.487427 GT:PL 0/1:116,0,71
Scaffold_1 49770 . T C 54.0072 PASS DP=9;VDB=0.885471;SGB=-0.556411;RPB=0.868321;MQB=0.868321;MQSB=0.900802;BQB=0.868321;MQ0F=0.111111;AF1=0.5;AC1=1;DP4=1,3,2,2;MQ=34;FQ=56.803;PV4=1,1,0.227891,0.302187 GT:PL 0/1:84,0,97
Scaffold_1 49797 . C T 51.0072 PASS DP=8;VDB=0.372756;SGB=-0.556411;RPB=0.992367;MQB=0.868321;MQSB=1;BQB=0.992367;MQ0F=0.125;AF1=0.5;AC1=1;DP4=0,4,1,3;MQ=36;FQ=51.8909;PV4=1,0.419616,0.179098,1 GT:PL 0/1:81,0,83
Scaffold_1 49800 . T C 53.0072 PASS DP=8;VDB=0.372756;SGB=-0.556411;RPB=1.01283;MQB=0.810265;MQSB=1;BQB=1.01283;MQ0F=0.125;AF1=0.5;AC1=1;DP4=0,3,1,3;MQ=37;FQ=42.803;PV4=1,1,0.167384,1 GT:PL 0/1:83,0,70
Scaffold_1 49867 . T C 87.0185 PASS DP=7;VDB=0.82249;SGB=-0.590765;RPB=1;MQB=1;MQSB=0.875;BQB=1;MQ0F=0;AF1=0.501256;AC1=1;DP4=0,1,2,3;MQ=45;FQ=-5.445;PV4=1,0.308383,0.167627,0.352 GT:PL 0/1:117,0,23
Scaffold_1 49928 . C T 91.0077 PASS DP=7;VDB=0.176409;SGB=-0.556411;RPB=1;MQB=1;MQSB=1;BQB=0.75;MQ0F=0;AF1=0.500006;AC1=1;DP4=0,2,2,2;MQ=53;FQ=19.069;PV4=0.466667,0.270735,1,1 GT:PL 0/1:121,0,46
Scaffold_1 49940 . T C 115.008 PASS DP=8;VDB=0.5;SGB=-0.616816;RPB=0.833333;MQB=0.833333;MQSB=0.900802;BQB=0.666667;MQ0F=0;AF1=0.500025;AC1=1;DP4=0,2,3,3;MQ=48;FQ=13.2265;PV4=0.464286,0.270511,1,1 GT:PL 0/1:145,0,40
Scaffold_1 50053 . T C 95.2728 PASS DP=6;VDB=0.349195;SGB=-0.590765;RPB=1;MQB=1;MQSB=1;BQB=1;MQ0F=0;AF1=0.533586;AC1=1;DP4=0,1,5,0;MQ=41;FQ=-18.0541;PV4=0.166667,0.352,1,1 GT:PL 0/1:125,0,9
Scaffold_1 50055 . A G 97.2729 PASS DP=7;VDB=0.336719;SGB=-0.590765;RPB=1;MQB=1;MQSB=1;BQB=1;MQ0F=0;AF1=0.533586;AC1=1;DP4=0,1,5,0;MQ=41;FQ=-18.0541;PV4=0.166667,1,1,1 GT:PL 0/1:127,0,9
Scaffold_1 50086 . T G 134.066 PASS DP=7;VDB=0.798293;SGB=-0.636426;MQSB=0.4;MQ0F=0;AF1=1;AC1=2;DP4=0,0,5,2;MQ=46;FQ=-47.986 GT:PL 1/1:167,21,0
Scaffold_1 51022 . C T 106.066 PASS DP=7;VDB=0.0498254;SGB=-0.636426;MQSB=1;MQ0F=0;AF1=1;AC1=2;DP4=0,0,1,6;MQ=32;FQ=-47.986 GT:PL 1/1:139,21,0
Scaffold_1 51025 . C T 80.2636 PASS DP=7;VDB=0.0385499;SGB=-0.590765;MQ0F=0;AF1=1;AC1=2;DP4=0,0,0,5;MQ=32;FQ=-41.9862 GT:PL 1/1:113,15,0
Scaffold_1 51083 . A G 108.264 PASS DP=5;VDB=0.996545;SGB=-0.590765;MQSB=0.666667;MQ0F=0;AF1=1;AC1=2;DP4=0,0,2,3;MQ=36;FQ=-41.9862 GT:PL 1/1:141,15,0
Scaffold_1 51097 . C T 48.9722 PASS DP=3;VDB=0.935046;SGB=-0.511536;MQSB=1;MQ0F=0;AF1=1;AC1=2;DP4=0,0,1,2;MQ=34;FQ=-35.9869 GT:PL 1/1:81,9,0
Scaffold_1 51149 . A G 81.9726 PASS DP=3;VDB=0.259298;SGB=-0.511536;MQSB=1;MQ0F=0;AF1=1;AC1=2;DP4=0,0,1,2;MQ=46;FQ=-35.9869 GT:PL 1/1:114,9,0
Scaffold_1 51194 . T C 81.9726 PASS DP=3;VDB=0.259298;SGB=-0.511536;MQSB=1;MQ0F=0;AF1=1;AC1=2;DP4=0,0,1,2;MQ=46;FQ=-35.9869 GT:PL 1/1:114,9,0
Scaffold_1 56623 . T C 153.067 PASS DP=8;VDB=0.0513273;SGB=-0.636426;MQSB=1;MQ0F=0;AF1=1;AC1=2;DP4=0,0,6,1;MQ=60;FQ=-47.986 GT:PL 1/1:186,21,0
Scaffold_1 56749 . G C 152.134 PASS DP=7;VDB=0.5;SGB=-0.616816;MQSB=0.861511;MQ0F=0;AF1=1;AC1=2;DP4=0,0,3,3;MQ=60;FQ=-44.9861 GT:PL 1/1:185,18,0
Scaffold_1 56843 . A G 180.067 PASS DP=9;VDB=0.470665;SGB=-0.636426;MQSB=1.01283;MQ0F=0;AF1=1;AC1=2;DP4=0,0,3,4;MQ=60;FQ=-47.986 GT:PL 1/1:213,21,0
Scaffold_1 57322 . T G 222.003 PASS DP=11;VDB=0.63143;SGB=-0.676189;MQSB=0.964642;MQ0F=0;AF1=1;AC1=2;DP4=0,0,7,4;MQ=60;FQ=-59.9861 GT:PL 1/1:255,33,0
Scaffold_1 57323 . G T 222.008 PASS DP=11;VDB=0.585652;SGB=-0.670168;MQSB=0.916482;MQ0F=0;AF1=1;AC1=2;DP4=0,0,7,3;MQ=60;FQ=-56.9861 GT:PL 1/1:255,30,0
Scaffold_1 60353 . C A 13.2188 PASS DP=11;VDB=0.02;SGB=-0.453602;RPB=0.222222;MQB=1;MQSB=0.950952;BQB=0.444444;MQ0F=0;AF1=0.499987;AC1=1;DP4=5,4,0,2;MQ=60;FQ=16.1222;PV4=0.454545,1,1,0.102618 GT:PL 0/1:43,0,220
Scaffold_1 62716 . G T 22.0341 PASS DP=8;VDB=0.02;SGB=-0.453602;RPB=0.5;MQB=1;MQSB=0.900802;BQB=0.5;MQ0F=0;AF1=0.499998;AC1=1;DP4=3,3,2,0;MQ=60;FQ=25.0286;PV4=0.464286,1,1,0.482845 GT:PL 0/1:52,0,153
Scaffold_1 68102 . C A 19.061 PASS DP=8;VDB=0.02;SGB=-0.453602;RPB=1;MQB=1;MQSB=1;BQB=0.916667;MQ0F=0;AF1=0.499997;AC1=1;DP4=4,2,2,0;MQ=60;FQ=22.0421;PV4=1,1,1,1 GT:PL 0/1:49,0,169
Scaffold_1 75470 . T G 24.0241 PASS DP=15;VDB=0.137328;SGB=-0.511536;RPB=0.127819;MQB=0.127819;MQSB=0.679965;BQB=0.649117;MQ0F=0;AF1=0.499999;AC1=1;DP4=5,5,3,0;MQ=43;FQ=27.0236;PV4=0.230769,0.242025,0.0230357,0.413461 GT:PL 0/1:54,0,242
Scaffold_1 75518 . C T 41.0074 PASS DP=15;VDB=0.993012;SGB=-0.511536;RPB=0.862013;MQB=0.738577;MQSB=0.566154;BQB=0.973096;MQ0F=0;AF1=0.5;AC1=1;DP4=7,4,2,1;MQ=49;FQ=44.0154;PV4=1,1,0.18154,0.0057489 GT:PL 0/1:71,0,239
Scaffold_1 75630 . G T 124.008 PASS DP=17;VDB=0.00794932;SGB=-0.616816;RPB=0.134399;MQB=0.0467706;MQSB=0.972604;BQB=0.939413;MQ0F=0;AF1=0.5;AC1=1;DP4=4,5,2,4;MQ=54;FQ=127.016;PV4=1,1,0.00212548,1 GT:PL 0/1:154,0,229
Scaffold_1 80399 . T C 24.0241 PASS DP=9;VDB=0.44;SGB=-0.453602;RPB=0.4;MQB=0.2;MQSB=1;BQB=0.2;MQ0F=0.222222;AF1=0.499999;AC1=1;DP4=3,2,2,0;MQ=33;FQ=27.0064;PV4=1,1,1,1 GT:PL 0/1:54,0,78
Scaffold_1 80487 . C T 70.0074 PASS DP=10;VDB=0.348933;SGB=-0.556411;RPB=0.248092;MQB=0.868321;MQSB=0.750668;BQB=0.248092;MQ0F=0.1;AF1=0.5;AC1=1;DP4=1,3,4,0;MQ=49;FQ=51.981;PV4=0.142857,1,1,1 GT:PL 0/1:100,0,79
Scaffold_1 80517 . A C 109.008 PASS DP=8;VDB=0.507898;SGB=-0.590765;RPB=0.900802;MQB=0.450401;MQSB=0.62023;BQB=0.900802;MQ0F=0;AF1=0.5;AC1=1;DP4=0,3,4,1;MQ=54;FQ=55.0154;PV4=0.142857,1,0.0778762,0.240809 GT:PL 0/1:139,0,82
Scaffold_1 81045 . G C 19.061 PASS DP=10;VDB=0.354794;SGB=-0.511536;RPB=0.924584;MQB=0.809011;MQSB=0.89338;BQB=0.809011;MQ0F=0;AF1=0.499997;AC1=1;DP4=4,2,1,2;MQ=36;FQ=22.0421;PV4=0.52381,1,0.390461,1 GT:PL 0/1:49,0,99
Scaffold_1 81098 . A G 77.0075 PASS DP=14;VDB=0.640324;SGB=-0.636426;RPB=0.966012;MQB=0.834543;MQSB=0.997919;BQB=0.777382;MQ0F=0;AF1=0.5;AC1=1;DP4=4,3,2,5;MQ=36;FQ=79.5007;PV4=0.592075,0.463002,0.242566,1 GT:PL 0/1:107,0,116
Scaffold_1 81180 . C T 88.0076 PASS DP=14;VDB=0.571008;SGB=-0.636426;RPB=0.885987;MQB=0.0857407;MQSB=0.640197;BQB=0.714506;MQ0F=0;AF1=0.5;AC1=1;DP4=4,3,3,4;MQ=41;FQ=91.0158;PV4=1,0.109916,0.00427337,1 GT:PL 0/1:118,0,172
Scaffold_1 81226 . A C 49.0072 PASS DP=11;VDB=0.724522;SGB=-0.616816;RPB=0.895781;MQB=0.0559863;MQSB=0.916482;BQB=0.727822;MQ0F=0.0909091;AF1=0.5;AC1=1;DP4=3,1,4,2;MQ=41;FQ=52.0136;PV4=1,0.137151,0.000625394,0.147389 GT:PL 0/1:79,0,113
Scaffold_1 81275 . T G 13.2188 PASS DP=7;VDB=0.519801;SGB=-0.511536;RPB=1.01283;MQB=0.607698;MQSB=0.810265;BQB=0.607698;MQ0F=0.142857;AF1=0.499987;AC1=1;DP4=2,2,2,1;MQ=41;FQ=16.1222;PV4=1,1,0.155928,1 GT:PL 0/1:43,0,95
Scaffold_1 81290 . C T 31.0104 PASS DP=8;VDB=0.92749;SGB=-0.556411;RPB=0.868321;MQB=0.868321;MQSB=0.666667;BQB=0.62023;MQ0F=0.125;AF1=0.5;AC1=1;DP4=3,1,3,1;MQ=35;FQ=33.8473;PV4=1,0.0669873,0.229519,0.233381 GT:PL 0/1:61,0,75
Scaffold_1 81327 . C T 48.0072 PASS DP=10;VDB=0.345017;SGB=-0.590765;RPB=0.730948;MQB=0.974597;MQSB=0.89338;BQB=0.89338;MQ0F=0.1;AF1=0.5;AC1=1;DP4=1,3,4,1;MQ=37;FQ=44.0421;PV4=0.206349,0.203542,0.481399,1 GT:PL 0/1:78,0,72
Scaffold_1 81340 . A T 41.0074 PASS DP=12;VDB=0.353391;SGB=-0.590765;RPB=0.896474;MQB=0.6821;MQSB=0.760054;BQB=0.40926;MQ0F=0.0833333;AF1=0.5;AC1=1;DP4=1,6,4,1;MQ=43;FQ=44.0148;PV4=0.0719697,1,0.200352,1 GT:PL 0/1:71,0,110
Scaffold_1 81441 . T C 126.008 PASS DP=17;VDB=0.380458;SGB=-0.651104;RPB=0.871214;MQB=0.422455;MQSB=0.260295;BQB=0.96612;MQ0F=0;AF1=0.5;AC1=1;DP4=4,4,3,5;MQ=47;FQ=129.012;PV4=1,0.410712,0.108973,1 GT:PL 0/1:156,0,186
Scaffold_1 82001 . A C 14.176 PASS DP=23;VDB=0.482766;SGB=-0.616816;RPB=0.999387;MQB=0.00445283;MQSB=0.246123;BQB=0.915545;MQ0F=0;AF1=0.49999;AC1=1;DP4=12,5,1,5;MQ=50;FQ=17.1004;PV4=0.051532,0.215443,7.10292e-06,0.104938 GT:PL 0/1:44,0,255
Scaffold_1 82137 . G A 46.0072 PASS DP=20;VDB=0.761128;SGB=-0.590765;RPB=0.761685;MQB=0.00935147;MQSB=0.90252;BQB=0.951229;MQ0F=0;AF1=0.5;AC1=1;DP4=3,9,1,4;MQ=52;FQ=49.0153;PV4=1,0.260837,7.666e-06,1 GT:PL 0/1:76,0,242
Scaffold_1 85871 . C A 31.0104 PASS DP=5;VDB=0.02;SGB=-0.453602;RPB=0;MQB=1;MQSB=1;BQB=0.333333;MQ0F=0;AF1=0.5;AC1=1;DP4=2,1,2,0;MQ=60;FQ=33.9736;PV4=1,1,1,1 GT:PL 0/1:61,0,81
Scaffold_1 96053 . A G 13.2188 PASS DP=7;VDB=0.06;SGB=-0.453602;RPB=0.5;MQB=1;MQSB=1;BQB=0.5;MQ0F=0;AF1=0.499987;AC1=1;DP4=4,1,2,0;MQ=60;FQ=16.1222;PV4=1,0.283247,1,1 GT:PL 0/1:43,0,136
Scaffold_1 96566 . G T 41.0074 PASS DP=13;VDB=0.0221621;SGB=-0.511536;RPB=0.707404;MQB=1;MQSB=1;BQB=0.707404;MQ0F=0;AF1=0.5;AC1=1;DP4=4,5,0,3;MQ=60;FQ=44.0154;PV4=0.490909,1,1,1 GT:PL 0/1:71,0,221
Scaffold_1 107739 . A G 12.272 PASS DP=20;VDB=0.645206;SGB=-0.511536;RPB=0.601066;MQB=0.032027;MQSB=0.697005;BQB=0.979844;MQ0F=0;AF1=0.499984;AC1=1;DP4=8,5,3,0;MQ=56;FQ=15.1496;PV4=0.508929,1,1.30081e-07,1 GT:PL 0/1:42,0,255
Scaffold_1 107884 . T G 33.0091 PASS DP=19;VDB=0.0822145;SGB=-0.511536;RPB=0.602289;MQB=0.0286491;MQSB=0.984335;BQB=0.46131;MQ0F=0;AF1=0.5;AC1=1;DP4=7,8,1,2;MQ=58;FQ=36.0162;PV4=1,1,2.32422e-08,1 GT:PL 0/1:63,0,255
Scaffold_1 107894 . A T 34.0087 PASS DP=19;VDB=0.131948;SGB=-0.511536;RPB=0.27833;MQB=0.334041;MQSB=0.984335;BQB=0.776754;MQ0F=0;AF1=0.5;AC1=1;DP4=7,8,1,2;MQ=58;FQ=37.016;PV4=1,1,0.0463837,0.353787 GT:PL 0/1:64,0,255
Scaffold_1 107896 . A G 34.0087 PASS DP=19;VDB=0.142856;SGB=-0.511536;RPB=0.27833;MQB=0.334041;MQSB=0.984335;BQB=0.776754;MQ0F=0;AF1=0.5;AC1=1;DP4=7,8,1,2;MQ=58;FQ=37.016;PV4=1,1,0.0463837,0.415697 GT:PL 0/1:64,0,255
Scaffold_1 107957 . G A 88.0076 PASS DP=21;VDB=0.078438;SGB=-0.636426;RPB=0.924509;MQB=0.00843378;MQSB=0.981571;BQB=0.25042;MQ0F=0;AF1=0.5;AC1=1;DP4=8,5,4,3;MQ=53;FQ=91.0158;PV4=1,1,0.000110204,1 GT:PL 0/1:118,0,255
Scaffold_1 107962 . G A 49.0072 PASS DP=21;VDB=0.0974253;SGB=-0.616816;RPB=0.782349;MQB=0.0244257;MQSB=0.997478;BQB=0.987952;MQ0F=0;AF1=0.5;AC1=1;DP4=9,6,3,3;MQ=54;FQ=52.0153;PV4=1,1,0.000178899,1 GT:PL 0/1:79,0,255
Scaffold_1 107980 . T G 53.0072 PASS DP=21;VDB=0.0974253;SGB=-0.616816;RPB=0.782349;MQB=0.0244257;MQSB=0.997478;BQB=0.981239;MQ0F=0;AF1=0.5;AC1=1;DP4=9,6,3,3;MQ=54;FQ=56.0154;PV4=1,0.127239,0.000178899,1 GT:PL 0/1:83,0,255
Scaffold_1 107997 . C T 57.0073 PASS DP=19;VDB=0.101965;SGB=-0.616816;RPB=0.94769;MQB=0.0362656;MQSB=0.974693;BQB=0.588192;MQ0F=0;AF1=0.5;AC1=1;DP4=8,4,3,3;MQ=53;FQ=60.0154;PV4=0.626697,1,0.00078863,0.21644 GT:PL 0/1:87,0,241
Scaffold_1 108007 . C T 45.0072 PASS DP=18;VDB=0.0697235;SGB=-0.616816;RPB=0.998904;MQB=0.0193054;MQSB=0.995624;BQB=0.896149;MQ0F=0;AF1=0.5;AC1=1;DP4=8,4,4,2;MQ=54;FQ=48.0153;PV4=1,0.319563,0.000196158,1 GT:PL 0/1:75,0,253
Scaffold_1 108009 . G A 24.0241 PASS DP=18;VDB=0.100421;SGB=-0.556411;RPB=0.88901;MQB=0.135087;MQSB=0.948436;BQB=0.832083;MQ0F=0;AF1=0.499999;AC1=1;DP4=8,4,2,2;MQ=55;FQ=27.0236;PV4=0.604396,1,0.00355168,1 GT:PL 0/1:54,0,255
Scaffold_1 108278 . A G 27.0155 PASS DP=16;VDB=0.0681597;SGB=-0.511536;RPB=0.092944;MQB=0.2628;MQSB=0.967216;BQB=0.782349;MQ0F=0;AF1=0.499999;AC1=1;DP4=4,7,2,1;MQ=56;FQ=30.0194;PV4=0.538462,1,0.00726783,0.244065 GT:PL 0/1:57,0,255
Scaffold_1 108314 . C T 37.0079 PASS DP=19;VDB=0.26019;SGB=-0.556411;RPB=0.823732;MQB=0.629304;MQSB=0.797039;BQB=0.851925;MQ0F=0;AF1=0.5;AC1=1;DP4=7,6,2,2;MQ=54;FQ=40.0156;PV4=1,0.166829,0.0815683,1 GT:PL 0/1:67,0,255
Scaffold_1 108319 . C G 78.0075 PASS DP=19;VDB=0.277213;SGB=-0.590765;RPB=0.645028;MQB=0.814433;MQSB=0.729213;BQB=0.645028;MQ0F=0;AF1=0.5;AC1=1;DP4=7,6,2,3;MQ=54;FQ=81.0157;PV4=1,0.224882,0.14467,1 GT:PL 0/1:108,0,255
Scaffold_1 108396 . A T 213.009 PASS DP=18;VDB=0.345999;SGB=-0.680642;RPB=0.870325;MQB=0.0600547;MQSB=0.0775511;BQB=0.573753;MQ0F=0;AF1=0.5;AC1=1;DP4=2,3,9,3;MQ=51;FQ=87.0157;PV4=0.280058,1,0.00373332,0.498 GT:PL 0/1:243,0,114
Scaffold_1 108403 . T C 211.009 PASS DP=16;VDB=0.195169;SGB=-0.676189;RPB=0.900862;MQB=0.0632055;MQSB=0.0667034;BQB=0.966484;MQ0F=0;AF1=0.5;AC1=1;DP4=2,2,8,3;MQ=50;FQ=81.0157;PV4=0.56044,0.283048,0.00314464,0.474649 GT:PL 0/1:241,0,108
Scaffold_1 108413 . A T 188.009 PASS DP=15;VDB=0.159789;SGB=-0.670168;RPB=0.697676;MQB=0.0391639;MQSB=0.105399;BQB=0.612626;MQ0F=0;AF1=0.5;AC1=1;DP4=2,2,8,2;MQ=49;FQ=64.0155;PV4=0.52048,1,0.000775337,1 GT:PL 0/1:218,0,91
Scaffold_1 108415 . T G 184.009 PASS DP=15;VDB=0.15979;SGB=-0.670168;RPB=0.738968;MQB=0.0391639;MQSB=0.105399;BQB=0.960789;MQ0F=0;AF1=0.5;AC1=1;DP4=2,2,8,2;MQ=49;FQ=83.0157;PV4=0.52048,0.274313,0.000775337,1 GT:PL 0/1:214,0,110
Scaffold_1 108424 . G C 123.008 PASS DP=13;VDB=0.419626;SGB=-0.651104;RPB=0.913799;MQB=0.0591947;MQSB=0.151887;BQB=0.98568;MQ0F=0;AF1=0.5;AC1=1;DP4=1,3,8,0;MQ=49;FQ=71.0155;PV4=0.0181818,1,0.000389411,0.262468 GT:PL 0/1:153,0,98
Scaffold_1 108427 . T C 129.008 PASS DP=13;VDB=0.280204;SGB=-0.662043;RPB=0.540433;MQB=0.0853036;MQSB=0.2;BQB=0.707404;MQ0F=0;AF1=0.5;AC1=1;DP4=1,2,9,0;MQ=48;FQ=54.0154;PV4=0.0454545,0.17132,0.000601771,0.388694 GT:PL 0/1:159,0,81
Scaffold_1 108429 . G A 121.008 PASS DP=13;VDB=0.289496;SGB=-0.651104;RPB=0.360295;MQB=0.100573;MQSB=0.222222;BQB=0.829029;MQ0F=0;AF1=0.5;AC1=1;DP4=1,2,8,0;MQ=48;FQ=57.0154;PV4=0.0545455,0.194642,0.00125129,1 GT:PL 0/1:151,0,84
Scaffold_1 114837 . T A 12.272 PASS DP=14;VDB=0.1;SGB=-0.453602;RPB=0.727273;MQB=0;MQSB=0.961166;BQB=0.636364;MQ0F=0;AF1=0.499984;AC1=1;DP4=5,6,1,1;MQ=57;FQ=15.1496;PV4=1,1,9.24618e-19,1 GT:PL 0/1:42,0,255
Scaffold_1 114844 . C T 12.272 PASS DP=14;VDB=0.14;SGB=-0.453602;RPB=0.727273;MQB=0;MQSB=0.961166;BQB=0.909091;MQ0F=0;AF1=0.499984;AC1=1;DP4=6,5,1,1;MQ=57;FQ=15.1496;PV4=1,1,9.24618e-19,1 GT:PL 0/1:42,0,255
Scaffold_1 114864 . T C 21.0411 PASS DP=12;VDB=0.14;SGB=-0.453602;RPB=1;MQB=0;MQSB=0.916482;BQB=1;MQ0F=0;AF1=0.499998;AC1=1;DP4=6,2,1,1;MQ=57;FQ=24.0321;PV4=1,0.377156,6.21823e-14,1 GT:PL 0/1:51,0,221
Scaffold_1 114865 . T C 21.0411 PASS DP=12;VDB=0.14;SGB=-0.453602;RPB=1;MQB=0;MQSB=0.916482;BQB=1;MQ0F=0;AF1=0.499998;AC1=1;DP4=6,2,1,1;MQ=57;FQ=24.0321;PV4=1,0.398602,6.21823e-14,1 GT:PL 0/1:51,0,217
Scaffold_1 114873 . T G 18.0749 PASS DP=15;VDB=0.913952;SGB=-0.511536;RPB=0.914584;MQB=0.040184;MQSB=0.558035;BQB=0.879351;MQ0F=0;AF1=0.499996;AC1=1;DP4=8,2,1,2;MQ=55;FQ=21.0492;PV4=0.202797,0.190734,0.00013334,1 GT:PL 0/1:48,0,238
Scaffold_1 114882 . C T 15.1417 PASS DP=18;VDB=0.925064;SGB=-0.511536;RPB=0.952672;MQB=0.0368832;MQSB=0.811936;BQB=1;MQ0F=0;AF1=0.499992;AC1=1;DP4=7,4,1,2;MQ=55;FQ=18.0829;PV4=0.538462,1,6.21983e-05,1 GT:PL 0/1:45,0,255
Scaffold_1 114884 . A G 12.272 PASS DP=18;VDB=0.921489;SGB=-0.511536;RPB=0.91051;MQB=0.0342181;MQSB=0.778801;BQB=0.846482;MQ0F=0;AF1=0.499984;AC1=1;DP4=8,4,1,2;MQ=56;FQ=15.1496;PV4=0.525275,1,2.90844e-05,1 GT:PL 0/1:42,0,253
Scaffold_1 118312 . A G 14.176 PASS DP=9;VDB=0.32;SGB=-0.453602;RPB=0.666667;MQB=0;MQSB=0.300267;BQB=0.666667;MQ0F=0;AF1=0.49999;AC1=1;DP4=1,5,2,0;MQ=55;FQ=17.1004;PV4=0.107143,1,3.74453e-06,1 GT:PL 0/1:44,0,158
Scaffold_1 118343 . G A 16.1143 PASS DP=10;VDB=0.28399;SGB=-0.511536;RPB=0.809011;MQB=0.115573;MQSB=0.462292;BQB=0.809011;MQ0F=0;AF1=0.499994;AC1=1;DP4=3,3,3,0;MQ=52;FQ=19.069;PV4=0.464286,1,0.00114862,0.448889 GT:PL 0/1:46,0,172
Scaffold_1 118361 . A G 16.1143 PASS DP=10;VDB=0.292464;SGB=-0.511536;RPB=0.809011;MQB=0.115573;MQSB=0.462292;BQB=0.462292;MQ0F=0;AF1=0.499994;AC1=1;DP4=3,3,3,0;MQ=52;FQ=19.069;PV4=0.464286,1,0.00114862,1 GT:PL 0/1:46,0,164
Scaffold_1 118385 . T G 18.0749 PASS DP=11;VDB=0.309755;SGB=-0.511536;RPB=0.900802;MQB=0.150134;MQSB=0.450401;BQB=0.600535;MQ0F=0;AF1=0.499996;AC1=1;DP4=2,3,3,0;MQ=51;FQ=21.0492;PV4=0.196429,1,0.00289693,1 GT:PL 0/1:48,0,142
Scaffold_1 119615 . C A 24.0241 PASS DP=7;VDB=0.02;SGB=-0.453602;RPB=0.5;MQB=1;MQSB=1;BQB=0.875;MQ0F=0;AF1=0.499999;AC1=1;DP4=2,2,0,2;MQ=60;FQ=27.0236;PV4=0.466667,1,1,1 GT:PL 0/1:54,0,122
Scaffold_1 123366 . T A 33.0091 PASS DP=8;VDB=0.480825;SGB=-0.590765;RPB=0.450401;MQB=0.150134;MQSB=1;BQB=0.900802;MQ0F=0.125;AF1=0.5;AC1=1;DP4=2,1,5,0;MQ=44;FQ=35.9479;PV4=0.375,1,0.0153872,1 GT:PL 0/1:63,0,81
Scaffold_1 123376 . A T 29.0123 PASS DP=8;VDB=0.476318;SGB=-0.590765;RPB=0.450401;MQB=0.150134;MQSB=1;BQB=0.900802;MQ0F=0.125;AF1=0.5;AC1=1;DP4=2,1,5,0;MQ=44;FQ=32.0134;PV4=0.375,0.223777,0.0153872,1 GT:PL 0/1:59,0,89
Scaffold_1 123381 . A G 33.0091 PASS DP=8;VDB=0.471814;SGB=-0.590765;RPB=0.450401;MQB=0.150134;MQSB=1;BQB=0.750668;MQ0F=0.125;AF1=0.5;AC1=1;DP4=2,1,5,0;MQ=44;FQ=36.0053;PV4=0.375,1,0.0153872,0.240809 GT:PL 0/1:63,0,89
Scaffold_1 123386 . T A 28.0137 PASS DP=9;VDB=0.745967;SGB=-0.556411;RPB=0.607698;MQB=0.202566;MQSB=1;BQB=0.810265;MQ0F=0.111111;AF1=0.5;AC1=1;DP4=2,1,4,0;MQ=47;FQ=31.0181;PV4=0.428571,0.215733,0.031626,0.218294 GT:PL 0/1:58,0,99
Scaffold_1 125670 . C T 29.0123 PASS DP=13;VDB=0.220755;SGB=-0.511536;RPB=0.699673;MQB=0.040184;MQSB=0.828239;BQB=0.879351;MQ0F=0;AF1=0.5;AC1=1;DP4=5,5,2,1;MQ=55;FQ=32.0178;PV4=1,1,1.61642e-13,1 GT:PL 0/1:59,0,249
Scaffold_1 125683 . A G 29.0123 PASS DP=14;VDB=0.206307;SGB=-0.511536;RPB=0.699673;MQB=0.040184;MQSB=0.828239;BQB=1;MQ0F=0;AF1=0.5;AC1=1;DP4=5,5,2,1;MQ=55;FQ=32.0178;PV4=1,1,1.61642e-13,1 GT:PL 0/1:59,0,252
Scaffold_1 125702 . C T 31.0104 PASS DP=12;VDB=0.192436;SGB=-0.511536;RPB=0.920044;MQB=0.0497871;MQSB=0.8618;BQB=0.532481;MQ0F=0;AF1=0.5;AC1=1;DP4=4,4,2,1;MQ=54;FQ=34.0168;PV4=1,0.119872,3.27894e-11,1 GT:PL 0/1:61,0,227
Scaffold_1 125725 . C T 20.0499 PASS DP=8;VDB=0.166456;SGB=-0.511536;RPB=0.300267;MQB=0.150134;MQSB=0.450401;BQB=0.150134;MQ0F=0;AF1=0.499997;AC1=1;DP4=1,4,2,1;MQ=52;FQ=23.0366;PV4=0.464286,0.0541362,9.83744e-08,0.315568 GT:PL 0/1:50,0,144
Scaffold_1 125919 . A G 20.0499 PASS DP=9;VDB=0.0714862;SGB=-0.511536;RPB=0.607698;MQB=0.202566;MQSB=0.4;BQB=0.810265;MQ0F=0;AF1=0.499997;AC1=1;DP4=2,2,0,3;MQ=49;FQ=23.0366;PV4=0.428571,1,0.000898735,1 GT:PL 0/1:50,0,111
Scaffold_1 125929 . A C 15.1417 PASS DP=9;VDB=0.0785113;SGB=-0.511536;RPB=0.809011;MQB=0.115573;MQSB=0.577865;BQB=0.462292;MQ0F=0;AF1=0.499992;AC1=1;DP4=3,3,0,3;MQ=52;FQ=18.0829;PV4=0.464286,1,5.74578e-05,1 GT:PL 0/1:45,0,162
Scaffold_1 125943 . G A 20.0499 PASS DP=10;VDB=0.0785113;SGB=-0.511536;RPB=0.810265;MQB=0.202566;BQB=0.607698;MQ0F=0;AF1=0.499997;AC1=1;DP4=0,4,0,3;MQ=49;FQ=23.0365;PV4=1,1,0.000898735,1 GT:PL 0/1:50,0,100
Scaffold_1 125950 . C T 17.0924 PASS DP=9;VDB=0.0785113;SGB=-0.511536;RPB=0.450401;MQB=0.150134;MQSB=1;BQB=0.900802;MQ0F=0;AF1=0.499995;AC1=1;DP4=1,4,0,3;MQ=50;FQ=20.058;PV4=1,0.318155,0.000226236,1 GT:PL 0/1:47,0,137
Scaffold_1 125962 . C G 12.272 PASS DP=11;VDB=0.0785113;SGB=-0.511536;RPB=0.458241;MQB=0.0916482;MQSB=1;BQB=0.274945;MQ0F=0;AF1=0.499984;AC1=1;DP4=1,6,0,3;MQ=52;FQ=15.1496;PV4=1,1,1.4691e-05,1 GT:PL 0/1:42,0,151
Scaffold_1 127842 . A G 24.0241 PASS DP=8;VDB=0.0395055;SGB=-0.556411;RPB=0.868321;MQB=0.248092;MQSB=0.5;BQB=0.62023;MQ0F=0;AF1=0.499999;AC1=1;DP4=2,2,4,0;MQ=49;FQ=27.0236;PV4=0.428571,0.0669873,0.0258845,1 GT:PL 0/1:54,0,127
Scaffold_1 128046 . T C 26.0177 PASS DP=11;VDB=0.02;SGB=-0.453602;RPB=0.0833333;MQB=0;MQSB=0.868321;BQB=0.833333;MQ0F=0;AF1=0.499999;AC1=1;DP4=3,3,1,1;MQ=55;FQ=29.0205;PV4=1,0.449901,3.37904e-07,0.365162 GT:PL 0/1:56,0,186
Scaffold_1 128081 . T C 23.0285 PASS DP=12;VDB=0.348933;SGB=-0.556411;RPB=0.241161;MQB=0.0401934;MQSB=0.950952;BQB=0.643095;MQ0F=0;AF1=0.499999;AC1=1;DP4=3,4,2,2;MQ=51;FQ=26.0258;PV4=1,0.172004,0.000203385,0.112514 GT:PL 0/1:53,0,172
Scaffold_1 128168 . G T 15.1417 PASS DP=12;VDB=0.0714862;SGB=-0.511536;RPB=0.594025;MQB=0.920044;MQSB=0.954207;BQB=0.594025;MQ0F=0;AF1=0.499992;AC1=1;DP4=1,7,2,1;MQ=42;FQ=18.0829;PV4=0.151515,0.213959,0.426619,1 GT:PL 0/1:45,0,128
Scaffold_1 128191 . C T 11.3381 PASS DP=8;VDB=0.28;SGB=-0.453602;RPB=1;MQB=0.8;MQSB=0.5;BQB=0.6;MQ0F=0;AF1=0.49998;AC1=1;DP4=1,4,1,1;MQ=37;FQ=14.1508;PV4=1,1,1,1 GT:PL 0/1:41,0,62
Scaffold_1 128201 . C T 16.1143 PASS DP=9;VDB=0.0714862;SGB=-0.511536;RPB=0.924584;MQB=0.924584;MQSB=0.809011;BQB=0.809011;MQ0F=0;AF1=0.499994;AC1=1;DP4=1,5,2,1;MQ=40;FQ=19.0677;PV4=0.22619,0.230421,1,1 GT:PL 0/1:46,0,81
Scaffold_1 128209 . A C 37.0079 PASS DP=7;VDB=0.0714862;SGB=-0.511536;RPB=0.405132;MQB=1.01283;MQSB=0.9;BQB=0.405132;MQ0F=0;AF1=0.5;AC1=1;DP4=0,4,2,1;MQ=40;FQ=33.044;PV4=0.142857,0.0516624,1,1 GT:PL 0/1:67,0,61
Scaffold_1 128219 . G A 40.0075 PASS DP=7;VDB=0.0714862;SGB=-0.511536;RPB=0.405132;MQB=1.01283;MQSB=0.9;BQB=0.405132;MQ0F=0;AF1=0.5;AC1=1;DP4=0,4,2,1;MQ=40;FQ=33.502;PV4=0.142857,0.0516624,1,0.302945 GT:PL 0/1:70,0,61
Scaffold_1 128423 . A G 22.0341 PASS DP=10;VDB=0.690245;SGB=-0.511536;RPB=0.809011;MQB=0.115573;MQSB=0.142857;BQB=0.346719;MQ0F=0;AF1=0.499998;AC1=1;DP4=6,0,1,2;MQ=52;FQ=25.0286;PV4=0.0833333,0.00922576,3.65025e-05,0.234982 GT:PL 0/1:52,0,140
Scaffold_1 128431 . C A 28.0137 PASS DP=11;VDB=0.857144;SGB=-0.511536;RPB=0.829029;MQB=0.124514;MQSB=0.222222;BQB=0.979382;MQ0F=0;AF1=0.5;AC1=1;DP4=8,0,1,2;MQ=51;FQ=31.0185;PV4=0.0545455,0.403773,0.0110918,0.415424 GT:PL 0/1:58,0,151
Scaffold_1 128444 . G A 16.1143 PASS DP=10;VDB=0.857144;SGB=-0.511536;RPB=0.916482;MQB=0.183296;MQSB=0.25;BQB=0.824834;MQ0F=0;AF1=0.499994;AC1=1;DP4=7,0,1,2;MQ=50;FQ=19.069;PV4=0.0666667,0.136912,0.0184619,1 GT:PL 0/1:46,0,144
Scaffold_1 128460 . G A 34.0087 PASS DP=10;VDB=0.851467;SGB=-0.511536;RPB=0.924584;MQB=0.115573;MQSB=0.142857;BQB=0.577865;MQ0F=0;AF1=0.5;AC1=1;DP4=6,0,1,2;MQ=53;FQ=37.016;PV4=0.0833333,0.0852353,5.02663e-05,0.0852353 GT:PL 0/1:64,0,138
Scaffold_1 128462 . A G 37.0079 PASS DP=10;VDB=0.851467;SGB=-0.511536;RPB=0.924584;MQB=0.115573;MQSB=0.142857;BQB=0.924584;MQ0F=0;AF1=0.5;AC1=1;DP4=6,0,1,2;MQ=53;FQ=40.0156;PV4=0.0833333,1,5.02663e-05,0.0852353 GT:PL 0/1:67,0,134
Scaffold_1 128481 . G A 12.272 PASS DP=11;VDB=0.1;SGB=-0.453602;RPB=0.75;MQB=0;MQSB=0.6875;BQB=0.75;MQ0F=0;AF1=0.499984;AC1=1;DP4=7,1,1,1;MQ=56;FQ=15.1496;PV4=0.377778,0.272369,7.33807e-09,1 GT:PL 0/1:42,0,185
Scaffold_1 128493 . G A 41.0074 PASS DP=12;VDB=0.62656;SGB=-0.511536;RPB=0.382304;MQB=0.151887;MQSB=0.760709;BQB=0.983051;MQ0F=0;AF1=0.5;AC1=1;DP4=8,1,1,2;MQ=53;FQ=44.0154;PV4=0.127273,1,0.0196061,0.0407767 GT:PL 0/1:71,0,185
Scaffold_1 128540 . T A 55.0072 PASS DP=9;VDB=0.645206;SGB=-0.511536;RPB=0.900802;MQB=0.150134;MQSB=0.750668;BQB=0.600535;MQ0F=0;AF1=0.5;AC1=1;DP4=4,1,1,2;MQ=53;FQ=58.0154;PV4=0.464286,0.403465,1.00977e-06,1 GT:PL 0/1:85,0,150
Scaffold_1 128609 . G A 26.0177 PASS DP=8;VDB=0.94;SGB=-0.453602;RPB=1;MQB=0.333333;MQSB=0.600535;BQB=0.333333;MQ0F=0;AF1=0.499999;AC1=1;DP4=2,4,1,1;MQ=49;FQ=29.0205;PV4=1,1,0.305666,1 GT:PL 0/1:56,0,121
Scaffold_1 128618 . G A 13.2188 PASS DP=10;VDB=0.94;SGB=-0.453602;RPB=0.333333;MQB=0.666667;MQSB=0.25;BQB=0.75;MQ0F=0;AF1=0.499987;AC1=1;DP4=1,5,1,1;MQ=47;FQ=16.1222;PV4=0.464286,0.240809,0.387755,1 GT:PL 0/1:43,0,118
Scaffold_1 128632 . G A 50.0072 PASS DP=11;VDB=0.977838;SGB=-0.511536;RPB=0.824834;MQB=0.641538;MQSB=0.3125;BQB=0.641538;MQ0F=0;AF1=0.5;AC1=1;DP4=1,6,1,2;MQ=48;FQ=53.0153;PV4=1,1,0.254818,0.168394 GT:PL 0/1:80,0,131
Scaffold_1 128656 . C A 10.42 PASS DP=10;VDB=0.22;SGB=-0.453602;RPB=0.857143;MQB=0.571429;MQSB=0.285714;BQB=0.785714;MQ0F=0;AF1=0.499975;AC1=1;DP4=1,6,1,1;MQ=48;FQ=13.2265;PV4=0.416667,0.335509,0.280998,1 GT:PL 0/1:40,0,135
Scaffold_1 128707 . C T 15.1417 PASS DP=10;VDB=0.22;SGB=-0.453602;RPB=0.9375;MQB=0.5;MQSB=0.25;BQB=0.625;MQ0F=0;AF1=0.499992;AC1=1;DP4=1,7,1,1;MQ=48;FQ=18.0829;PV4=0.377778,1,0.281384,1 GT:PL 0/1:45,0,141
Scaffold_1 130330 . T C 11.3381 PASS DP=11;VDB=0.78;SGB=-0.453602;RPB=0.857143;MQB=0;MQSB=0.487298;BQB=1;MQ0F=0;AF1=0.49998;AC1=1;DP4=2,5,2,0;MQ=57;FQ=14.1838;PV4=0.166667,1,0.0157922,1 GT:PL 0/1:41,0,198
Scaffold_1 130626 . C T 31.0104 PASS DP=13;VDB=0.8442;SGB=-0.556411;RPB=0.838046;MQB=0.397295;MQSB=0.6821;BQB=0.838046;MQ0F=0.0769231;AF1=0.5;AC1=1;DP4=5,3,2,2;MQ=44;FQ=34.0168;PV4=1,1,0.0943778,0.0821043 GT:PL 0/1:61,0,177
Scaffold_1 130634 . T C 12.272 PASS DP=14;VDB=0.02;SGB=-0.453602;RPB=0;MQB=1;MQSB=0.666643;BQB=0.75;MQ0F=0.0714286;AF1=0.499984;AC1=1;DP4=5,3,0,2;MQ=44;FQ=15.1496;PV4=0.444444,0.401218,0.497332,0.00724908 GT:PL 0/1:42,0,159
Scaffold_1 130636 . T C 37.0079 PASS DP=14;VDB=0.852991;SGB=-0.590765;RPB=0.908075;MQB=0.0897512;MQSB=0.84246;BQB=0.958048;MQ0F=0.0714286;AF1=0.5;AC1=1;DP4=5,3,3,2;MQ=45;FQ=40.0156;PV4=1,1,0.00792485,1 GT:PL 0/1:67,0,190
Scaffold_1 130709 . A G 36.0081 PASS DP=14;VDB=0.336719;SGB=-0.590765;RPB=0.945959;MQB=0.011109;MQSB=0.497296;BQB=0.486752;MQ0F=0.0714286;AF1=0.5;AC1=1;DP4=6,3,1,4;MQ=51;FQ=39.0157;PV4=0.265734,0.0324968,7.78999e-06,0.158006 GT:PL 0/1:66,0,230
Scaffold_1 130753 . T C 20.0499 PASS DP=13;VDB=0.0249187;SGB=-0.511536;RPB=0.151887;MQB=0.290822;MQSB=0.47436;BQB=1;MQ0F=0.0769231;AF1=0.499997;AC1=1;DP4=5,4,1,2;MQ=49;FQ=23.0366;PV4=1,0.453274,0.0991066,0.183528 GT:PL 0/1:50,0,212
Scaffold_1 131182 . G C 33.0091 PASS DP=15;VDB=0.377852;SGB=-0.616816;RPB=0.605479;MQB=0.0297292;MQSB=1;BQB=0.431591;MQ0F=0;AF1=0.5;AC1=1;DP4=4,5,2,4;MQ=50;FQ=36.0162;PV4=1,1,0.000117681,1 GT:PL 0/1:63,0,221
Scaffold_1 131265 . C G 50.0072 PASS DP=14;VDB=0.717074;SGB=-0.590765;RPB=0.764228;MQB=0.10274;MQSB=0.875173;BQB=0.980199;MQ0F=0;AF1=0.5;AC1=1;DP4=4,5,4,1;MQ=47;FQ=53.0153;PV4=0.300699,1,0.019734,0.419374 GT:PL 0/1:80,0,198
Scaffold_1 131343 . A G 88.0076 PASS DP=13;VDB=0.396258;SGB=-0.590765;RPB=0.89338;MQB=0.0812164;MQSB=0.462292;BQB=0.974597;MQ0F=0;AF1=0.5;AC1=1;DP4=2,2,4,1;MQ=48;FQ=87.4767;PV4=0.52381,0.398986,0.0001017,1 GT:PL 0/1:118,0,117
Scaffold_1 131360 . C T 34.0087 PASS DP=14;VDB=0.645206;SGB=-0.511536;RPB=0.916482;MQB=0.458241;MQSB=1.00775;BQB=0.641538;MQ0F=0;AF1=0.5;AC1=1;DP4=4,3,2,1;MQ=48;FQ=37.016;PV4=1,1,0.0796278,1 GT:PL 0/1:64,0,165
Scaffold_1 131379 . G A 31.0104 PASS DP=14;VDB=0.382879;SGB=-0.511536;RPB=0.979382;MQB=0.309786;MQSB=0.683497;BQB=0.954207;MQ0F=0;AF1=0.5;AC1=1;DP4=5,3,1,2;MQ=50;FQ=34.0168;PV4=0.545455,0.302923,0.0553984,1 GT:PL 0/1:61,0,202
Scaffold_1 131391 . T C 66.0074 PASS DP=16;VDB=0.552878;SGB=-0.590765;RPB=0.838008;MQB=0.0194886;MQSB=0.813189;BQB=0.95494;MQ0F=0;AF1=0.5;AC1=1;DP4=4,3,2,3;MQ=50;FQ=69.0155;PV4=1,0.24477,7.3884e-06,1 GT:PL 0/1:96,0,201
Scaffold_1 131415 . C G 39.0076 PASS DP=13;VDB=0.382879;SGB=-0.511536;RPB=0.458241;MQB=0.274945;MQSB=0.783809;BQB=0.916482;MQ0F=0;AF1=0.5;AC1=1;DP4=3,4,1,2;MQ=51;FQ=42.0155;PV4=1,1,0.0416819,1 GT:PL 0/1:69,0,190
Scaffold_1 131658 . C T 12.272 PASS DP=12;VDB=0.251321;SGB=-0.511536;RPB=0.824834;MQB=0.0916482;MQSB=0.625;BQB=0.916482;MQ0F=0;AF1=0.499984;AC1=1;DP4=2,5,0,3;MQ=53;FQ=15.1496;PV4=1,0.43176,0.000459604,1 GT:PL 0/1:42,0,195
Scaffold_1 131679 . G A 28.0137 PASS DP=14;VDB=0.249971;SGB=-0.556411;RPB=0.977751;MQB=0.105399;MQSB=1;BQB=0.527292;MQ0F=0.0714286;AF1=0.5;AC1=1;DP4=1,9,0,4;MQ=49;FQ=31.0185;PV4=1,1,0.026733,1 GT:PL 0/1:58,0,182
Scaffold_1 131692 . C T 70.0074 PASS DP=14;VDB=0.602287;SGB=-0.616816;RPB=0.695312;MQB=0.0102252;MQSB=0.818182;BQB=0.623736;MQ0F=0.0714286;AF1=0.5;AC1=1;DP4=1,6,1,5;MQ=49;FQ=73.0156;PV4=1,0.056617,0.00021362,1 GT:PL 0/1:100,0,173
Scaffold_1 131751 . A T 77.0075 PASS DP=8;VDB=0.102049;SGB=-0.590765;RPB=0.900802;MQB=0.150134;MQSB=1;BQB=0.900802;MQ0F=0.125;AF1=0.5;AC1=1;DP4=0,3,1,4;MQ=45;FQ=52.0085;PV4=1,0.431472,0.0120661,0.240809 GT:PL 0/1:107,0,79
Scaffold_1 131762 . A G 11.3381 PASS DP=8;VDB=0.06;SGB=-0.453602;RPB=0.583333;MQB=0.333333;MQSB=1;BQB=0.5;MQ0F=0.125;AF1=0.49998;AC1=1;DP4=1,5,0,2;MQ=48;FQ=14.1838;PV4=1,0.0390704,0.309221,1 GT:PL 0/1:41,0,145
Scaffold_1 134220 . C T 26.0177 PASS DP=7;VDB=0.440791;SGB=-0.511536;RPB=0.861511;MQB=0.28717;MQSB=1;BQB=0.861511;MQ0F=0;AF1=0.499999;AC1=1;DP4=1,2,1,2;MQ=47;FQ=29.0202;PV4=1,0.18695,0.00321459,1 GT:PL 0/1:56,0,99
Scaffold_1 134221 . A G 23.0285 PASS DP=7;VDB=0.450604;SGB=-0.511536;RPB=0.810265;MQB=0.202566;MQSB=0.9;BQB=0.607698;MQ0F=0;AF1=0.499999;AC1=1;DP4=1,3,1,2;MQ=49;FQ=26.0258;PV4=1,1,0.000774702,1 GT:PL 0/1:53,0,118
Scaffold_1 134245 . C T 21.0411 PASS DP=12;VDB=0.497461;SGB=-0.556411;RPB=0.803868;MQB=0.0401934;MQSB=0.803868;BQB=0.361741;MQ0F=0;AF1=0.499998;AC1=1;DP4=3,4,1,3;MQ=50;FQ=24.0321;PV4=1,0.0237984,3.30803e-06,1 GT:PL 0/1:51,0,196
Scaffold_1 134525 . C T 24.0241 PASS DP=6;VDB=0.0221621;SGB=-0.511536;RPB=0.861511;MQB=0.861511;BQB=0.28717;MQ0F=0;AF1=0.499999;AC1=1;DP4=3,0,3,0;MQ=60;FQ=27.0214;PV4=1,0.0244058,1,1 GT:PL 0/1:54,0,87
Scaffold_1 134968 . C T 14.176 PASS DP=7;VDB=0.1;SGB=-0.453602;RPB=0.4;MQB=0;MQSB=1.01283;BQB=1;MQ0F=0;AF1=0.49999;AC1=1;DP4=3,2,1,1;MQ=54;FQ=17.1004;PV4=1,1,0.00294796,1 GT:PL 0/1:44,0,158
Scaffold_1 136285 . G T 13.2188 PASS DP=12;VDB=0.02;SGB=-0.453602;RPB=0.222222;MQB=1;MQSB=1;BQB=0.555556;MQ0F=0;AF1=0.499987;AC1=1;DP4=7,2,2,0;MQ=60;FQ=16.1222;PV4=1,1,1,1 GT:PL 0/1:43,0,204
Scaffold_1 137710 . A G 20.0499 PASS DP=9;VDB=0.02;SGB=-0.453602;RPB=0.333333;MQB=0;MQSB=0.600535;BQB=0.166667;MQ0F=0;AF1=0.499997;AC1=1;DP4=3,3,2,0;MQ=56;FQ=23.0366;PV4=0.464286,1,0,0.102145 GT:PL 0/1:50,0,153
Scaffold_1 137718 . G A 17.0924 PASS DP=9;VDB=0.02;SGB=-0.453602;RPB=0.285714;MQB=0;MQSB=0.809011;BQB=0.857143;MQ0F=0;AF1=0.499995;AC1=1;DP4=4,3,2,0;MQ=56;FQ=20.058;PV4=0.5,1,0,0.383871 GT:PL 0/1:47,0,191
Scaffold_1 137735 . C T 17.0924 PASS DP=10;VDB=0.02;SGB=-0.453602;RPB=0.571429;MQB=0;MQSB=0.809011;BQB=0.714286;MQ0F=0;AF1=0.499995;AC1=1;DP4=4,3,2,0;MQ=56;FQ=20.058;PV4=0.5,1,0,1 GT:PL 0/1:47,0,193
Scaffold_1 137738 . T C 17.0924 PASS DP=9;VDB=0.02;SGB=-0.453602;RPB=0.571429;MQB=0;MQSB=0.809011;BQB=0.714286;MQ0F=0;AF1=0.499995;AC1=1;DP4=4,3,2,0;MQ=56;FQ=20.058;PV4=0.5,1,0,1 GT:PL 0/1:47,0,191
Scaffold_1 137765 . G A 29.0123 PASS DP=5;VDB=0.02;SGB=-0.453602;RPB=0.666667;MQB=0;MQSB=1;BQB=0.666667;MQ0F=0;AF1=0.5;AC1=1;DP4=2,1,2,0;MQ=53;FQ=32.0172;PV4=1,1,0,1 GT:PL 0/1:59,0,98
Scaffold_1 137794 . T C 26.0177 PASS DP=6;VDB=0.02;SGB=-0.453602;RPB=0.5;MQB=0;MQSB=0.5;BQB=0.25;MQ0F=0;AF1=0.499999;AC1=1;DP4=2,2,2,0;MQ=54;FQ=29.0203;PV4=0.466667,1,0,1 GT:PL 0/1:56,0,100
Scaffold_1 137795 . G A 26.0177 PASS DP=6;VDB=0.02;SGB=-0.453602;RPB=0.5;MQB=0;MQSB=0.5;BQB=0.5;MQ0F=0;AF1=0.499999;AC1=1;DP4=2,2,2,0;MQ=54;FQ=29.0205;PV4=0.466667,1,0,1 GT:PL 0/1:56,0,126
Scaffold_1 137800 . G A 26.0177 PASS DP=6;VDB=0.02;SGB=-0.453602;RPB=0.5;MQB=0;MQSB=0.5;BQB=0.5;MQ0F=0;AF1=0.499999;AC1=1;DP4=2,2,2,0;MQ=54;FQ=29.0205;PV4=0.466667,1,0,1 GT:PL 0/1:56,0,122
Scaffold_1 137814 . G A 38.0077 PASS DP=8;VDB=0.964647;SGB=-0.556411;RPB=0.868321;MQB=0.124046;MQSB=0.868321;BQB=0.868321;MQ0F=0;AF1=0.5;AC1=1;DP4=2,2,2,2;MQ=47;FQ=41.0155;PV4=1,1,0.00339577,1 GT:PL 0/1:68,0,120
Scaffold_1 137821 . G A 29.0123 PASS DP=9;VDB=0.964647;SGB=-0.556411;RPB=0.974597;MQB=0.0812164;MQSB=0.730948;BQB=0.89338;MQ0F=0;AF1=0.5;AC1=1;DP4=3,2,2,2;MQ=49;FQ=32.0178;PV4=1,0.391316,0.00124004,1 GT:PL 0/1:59,0,147
Scaffold_1 137833 . T C 38.0077 PASS DP=8;VDB=0.959397;SGB=-0.556411;RPB=0.868321;MQB=0.124046;MQSB=0.868321;BQB=0.62023;MQ0F=0;AF1=0.5;AC1=1;DP4=2,2,2,2;MQ=47;FQ=41.0154;PV4=1,1,0.00339577,0.321613 GT:PL 0/1:68,0,116
Scaffold_1 137881 . C A 26.0177 PASS DP=8;VDB=0.374631;SGB=-0.590765;RPB=0.750668;MQB=0.150134;MQSB=0.833333;BQB=0.450401;MQ0F=0;AF1=0.499999;AC1=1;DP4=1,2,1,4;MQ=47;FQ=29.0196;PV4=1,0.0698417,0.0488441,0.240809 GT:PL 0/1:56,0,93
Scaffold_1 137912 . A G 38.0077 PASS DP=10;VDB=0.374631;SGB=-0.590765;RPB=0.904729;MQB=0.0476173;MQSB=0.916482;BQB=0.857112;MQ0F=0;AF1=0.5;AC1=1;DP4=2,3,1,4;MQ=50;FQ=41.0155;PV4=1,1,0.0154831,1 GT:PL 0/1:68,0,147
Scaffold_1 137925 . A G 38.0077 PASS DP=10;VDB=0.366085;SGB=-0.590765;RPB=0.857112;MQB=0.0476173;MQSB=0.916482;BQB=0.857112;MQ0F=0;AF1=0.5;AC1=1;DP4=2,3,1,4;MQ=50;FQ=41.0155;PV4=1,1,0.0154831,1 GT:PL 0/1:68,0,148
Scaffold_1 137942 . G A 29.0123 PASS DP=10;VDB=0.0941127;SGB=-0.511536;RPB=0.900802;MQB=0.150134;MQSB=0.900802;BQB=0.900802;MQ0F=0;AF1=0.5;AC1=1;DP4=2,3,1,2;MQ=56;FQ=32.0178;PV4=1,1,0.0883964,1 GT:PL 0/1:59,0,153
Scaffold_1 137970 . C T 29.0123 PASS DP=8;VDB=0.0532881;SGB=-0.511536;RPB=0.450401;MQB=0.150134;MQSB=0.666667;BQB=0.900802;MQ0F=0;AF1=0.5;AC1=1;DP4=1,4,1,2;MQ=56;FQ=32.0178;PV4=1,1,0.0883964,1 GT:PL 0/1:59,0,133
Scaffold_1 147667 . C T 41.7648 PASS DP=2;VDB=0.02;SGB=-0.453602;MQ0F=0;AF1=1;AC1=2;DP4=0,0,2,0;MQ=40;FQ=-32.988 GT:PL 1/1:73,6,0
Scaffold_1 147712 . T A 26.0178 PASS DP=6;VDB=0.02;SGB=-0.453602;RPB=0;MQB=0;MQSB=0.25;BQB=0.5;MQ0F=0;AF1=0.500007;AC1=1;DP4=2,2,2,0;MQ=28;FQ=17.7563;PV4=0.466667,1,1,1 GT:PL 0/1:56,0,45
Scaffold_1 153393 . C A 16.1143 PASS DP=10;VDB=0.02;SGB=-0.453602;RPB=0.25;MQB=1;MQSB=0.916482;BQB=1;MQ0F=0;AF1=0.499994;AC1=1;DP4=5,3,2,0;MQ=60;FQ=19.069;PV4=1,1,1,0.104783 GT:PL 0/1:46,0,221
Scaffold_1 154721 . G A 20.0499 PASS DP=9;VDB=0.44;SGB=-0.453602;RPB=0.333333;MQB=0;MQSB=0.666667;BQB=0.833333;MQ0F=0;AF1=0.499997;AC1=1;DP4=4,2,2,0;MQ=56;FQ=23.0366;PV4=1,0.301823,0,1 GT:PL 0/1:50,0,197
Scaffold_1 154727 . C T 20.0499 PASS DP=9;VDB=0.44;SGB=-0.453602;RPB=0.666667;MQB=0;MQSB=0.666667;BQB=1;MQ0F=0;AF1=0.499997;AC1=1;DP4=4,2,2,0;MQ=56;FQ=23.0366;PV4=1,0.351125,0,1 GT:PL 0/1:50,0,192
Scaffold_1 154825 . C T 23.0285 PASS DP=10;VDB=0.98;SGB=-0.453602;RPB=1;MQB=0;MQSB=0.809011;BQB=0.428571;MQ0F=0;AF1=0.499999;AC1=1;DP4=2,5,1,1;MQ=56;FQ=26.0258;PV4=1,1,0,0.00465604 GT:PL 0/1:53,0,195
Scaffold_1 154872 . A G 23.0285 PASS DP=9;VDB=0.26;SGB=-0.453602;RPB=0.2;MQB=0;MQSB=1;BQB=0.8;MQ0F=0;AF1=0.499999;AC1=1;DP4=1,4,0,2;MQ=55;FQ=26.0258;PV4=1,1,0,1 GT:PL 0/1:53,0,135
Scaffold_1 154883 . A C 20.0499 PASS DP=9;VDB=0.28;SGB=-0.453602;RPB=0.5;MQB=0;MQSB=0.666667;BQB=0.5;MQ0F=0;AF1=0.499997;AC1=1;DP4=2,4,0,2;MQ=56;FQ=23.0366;PV4=1,1,0,1 GT:PL 0/1:50,0,156
Scaffold_1 154892 . G T 23.0285 PASS DP=7;VDB=0.26;SGB=-0.453602;RPB=0.75;MQB=0;MQSB=1;BQB=0.75;MQ0F=0;AF1=0.499999;AC1=1;DP4=1,3,0,2;MQ=54;FQ=26.0258;PV4=1,0.316406,0,1 GT:PL 0/1:53,0,124
Scaffold_1 154906 . G C 20.0499 PASS DP=8;VDB=0.28;SGB=-0.453602;RPB=0.5;MQB=0;MQSB=1;BQB=0.5;MQ0F=0;AF1=0.499997;AC1=1;DP4=1,5,0,2;MQ=56;FQ=23.0366;PV4=1,1,0,1 GT:PL 0/1:50,0,155
Scaffold_1 154919 . G C 20.0499 PASS DP=8;VDB=0.28;SGB=-0.453602;RPB=0.166667;MQB=0;MQSB=0.666667;BQB=0.666667;MQ0F=0;AF1=0.499997;AC1=1;DP4=2,4,0,2;MQ=56;FQ=23.0366;PV4=1,1,0,1 GT:PL 0/1:50,0,173
Scaffold_1 154929 . G A 20.0499 PASS DP=8;VDB=0.28;SGB=-0.453602;RPB=0.166667;MQB=0;MQSB=0.666667;BQB=0.5;MQ0F=0;AF1=0.499997;AC1=1;DP4=2,4,0,2;MQ=56;FQ=23.0366;PV4=1,1,0,0.0813581 GT:PL 0/1:50,0,163
Scaffold_1 154930 . C T 14.176 PASS DP=8;VDB=0.32;SGB=-0.453602;RPB=0.166667;MQB=0;MQSB=0.666667;BQB=0.833333;MQ0F=0;AF1=0.49999;AC1=1;DP4=2,4,0,2;MQ=56;FQ=17.1004;PV4=1,0.321709,0,0.0669873 GT:PL 0/1:44,0,167
Scaffold_1 155686 . G A 10.42 PASS DP=10;VDB=0.18;SGB=-0.453602;RPB=0.571429;MQB=0;MQSB=0.730948;BQB=0.857143;MQ0F=0;AF1=0.499975;AC1=1;DP4=3,4,2,0;MQ=55;FQ=13.2265;PV4=0.444444,1,1.08834e-05,1 GT:PL 0/1:40,0,196
Scaffold_1 155756 . A G 10.42 PASS DP=9;VDB=0.18;SGB=-0.453602;RPB=0.285714;MQB=0;MQSB=0.730948;BQB=0.928571;MQ0F=0;AF1=0.499975;AC1=1;DP4=3,4,2,0;MQ=55;FQ=13.2265;PV4=0.444444,1,1.08834e-05,0.237092 GT:PL 0/1:40,0,192
Scaffold_1 155848 . C T 10.42 PASS DP=9;VDB=0.5;SGB=-0.453602;RPB=0;MQB=0;MQSB=0.809011;BQB=1;MQ0F=0;AF1=0.499975;AC1=1;DP4=3,4,0,2;MQ=56;FQ=13.2265;PV4=0.5,1,2.1669e-06,1 GT:PL 0/1:40,0,206
Scaffold_1 155876 . C T 18.0749 PASS DP=6;VDB=0.52;SGB=-0.453602;RPB=0;MQB=0;MQSB=0.5;BQB=0.5;MQ0F=0;AF1=0.499996;AC1=1;DP4=2,2,0,2;MQ=53;FQ=21.0492;PV4=0.466667,1,0.000442182,1 GT:PL 0/1:48,0,113
Scaffold_1 155888 . A G 13.2188 PASS DP=7;VDB=0.52;SGB=-0.453602;RPB=0.4;MQB=0;MQSB=0.607698;BQB=0.7;MQ0F=0;AF1=0.499987;AC1=1;DP4=3,2,0,2;MQ=54;FQ=16.1222;PV4=0.428571,0.256655,7.45456e-05,1 GT:PL 0/1:43,0,155
Scaffold_1 155896 . C T 16.1143 PASS DP=8;VDB=0.52;SGB=-0.453602;RPB=0.4;MQB=0;MQSB=0.607698;BQB=0.6;MQ0F=0;AF1=0.499994;AC1=1;DP4=3,2,0,2;MQ=54;FQ=19.069;PV4=0.428571,1,7.45456e-05,1 GT:PL 0/1:46,0,145
Scaffold_1 155897 . A G 13.2188 PASS DP=8;VDB=0.52;SGB=-0.453602;RPB=0.666667;MQB=0;MQSB=0.750668;BQB=0.666667;MQ0F=0;AF1=0.499987;AC1=1;DP4=3,3,0,2;MQ=55;FQ=16.1222;PV4=0.464286,1,1.26686e-05,1 GT:PL 0/1:43,0,171
Scaffold_1 155909 . G A 13.2188 PASS DP=8;VDB=0.52;SGB=-0.453602;RPB=0.4;MQB=0;MQSB=0.607698;BQB=0.8;MQ0F=0;AF1=0.499987;AC1=1;DP4=3,2,0,2;MQ=54;FQ=16.1222;PV4=0.428571,1,7.45456e-05,1 GT:PL 0/1:43,0,138
Scaffold_1 155915 . A G 18.0749 PASS DP=6;VDB=0.52;SGB=-0.453602;RPB=1;MQB=0;MQSB=0.5;BQB=0.25;MQ0F=0;AF1=0.499996;AC1=1;DP4=2,2,0,2;MQ=53;FQ=21.0492;PV4=0.466667,1,0.000442182,1 GT:PL 0/1:48,0,118
Scaffold_1 157104 . G A 25.0205 PASS DP=10;VDB=0.52;SGB=-0.453602;RPB=0.571429;MQB=0.5;MQSB=0.730948;BQB=0.714286;MQ0F=0;AF1=0.499999;AC1=1;DP4=3,4,1,1;MQ=59;FQ=28.0219;PV4=1,1,0.0261782,0.163072 GT:PL 0/1:55,0,186
Scaffold_1 157141 . A G 24.0241 PASS DP=7;VDB=0.94;SGB=-0.453602;RPB=1;MQB=0;MQSB=0.6;BQB=0.4;MQ0F=0;AF1=0.499999;AC1=1;DP4=3,2,2,0;MQ=56;FQ=27.0236;PV4=1,1,6.14878e-05,1 GT:PL 0/1:54,0,134
Scaffold_1 157151 . A G 27.0155 PASS DP=6;VDB=0.94;SGB=-0.453602;RPB=0.75;MQB=0;MQSB=1;BQB=1;MQ0F=0;AF1=0.499999;AC1=1;DP4=3,1,2,0;MQ=55;FQ=30.0194;PV4=1,1,0.000379137,0.369827 GT:PL 0/1:57,0,127
Scaffold_1 164273 . G T 22.0341 PASS DP=8;VDB=0.02;SGB=-0.453602;RPB=0.666667;MQB=0.833333;MQSB=0.833333;BQB=0.333333;MQ0F=0;AF1=0.499998;AC1=1;DP4=2,4,0,2;MQ=59;FQ=25.0286;PV4=1,1,1,1 GT:PL 0/1:52,0,168
Scaffold_1 168987 . A T 29.0123 PASS DP=21;VDB=0.0196075;SGB=-0.590765;RPB=0.993603;MQB=0.0110379;MQSB=0.697005;BQB=0.366897;MQ0F=0;AF1=0.5;AC1=1;DP4=7,4,4,1;MQ=51;FQ=32.0178;PV4=1,1,1.00282e-05,1 GT:PL 0/1:59,0,198
Scaffold_1 169200 . A G 29.0123 PASS DP=13;VDB=0.121629;SGB=-0.511536;RPB=0.213796;MQB=0.382304;MQSB=0.382304;BQB=0.707404;MQ0F=0;AF1=0.5;AC1=1;DP4=3,6,0,3;MQ=49;FQ=32.0178;PV4=0.509091,1,0.227082,1 GT:PL 0/1:59,0,187
Scaffold_1 169302 . G C 34.0087 PASS DP=20;VDB=0.302039;SGB=-0.616816;RPB=0.0307153;MQB=0.00247875;MQSB=0.25042;BQB=0.902225;MQ0F=0;AF1=0.5;AC1=1;DP4=7,7,0,6;MQ=53;FQ=37.016;PV4=0.0514964,0.246387,4.73706e-08,0.249852 GT:PL 0/1:64,0,255
Scaffold_1 169893 . G A 22.0341 PASS DP=16;VDB=0.102722;SGB=-0.511536;RPB=0.979844;MQB=0.964448;MQSB=0.333524;BQB=0.48045;MQ0F=0.125;AF1=0.499998;AC1=1;DP4=6,7,3,0;MQ=40;FQ=25.0286;PV4=0.2125,1,1,1 GT:PL 0/1:52,0,213
Scaffold_1 169909 . C T 10.42 PASS DP=20;VDB=0.102722;SGB=-0.511536;RPB=0.667136;MQB=0.9986;MQSB=0.382304;BQB=0.729697;MQ0F=0.1;AF1=0.499975;AC1=1;DP4=10,7,3,0;MQ=37;FQ=13.2265;PV4=0.521053,1,1,1 GT:PL 0/1:40,0,246
Scaffold_1 170205 . T C 31.0104 PASS DP=16;VDB=0.0186337;SGB=-0.616816;RPB=0.84472;MQB=0.0672055;MQSB=0.399018;BQB=0.811936;MQ0F=0.1875;AF1=0.5;AC1=1;DP4=3,5,3,3;MQ=40;FQ=34.0168;PV4=1,0.188865,0.00516274,1 GT:PL 0/1:61,0,187
Scaffold_1 170359 . A G 22.0341 PASS DP=11;VDB=0.06;SGB=-0.453602;RPB=0.75;MQB=0.1875;MQSB=0.916482;BQB=0.75;MQ0F=0;AF1=0.499998;AC1=1;DP4=2,6,1,1;MQ=57;FQ=25.0286;PV4=1,1,0.0278833,1 GT:PL 0/1:52,0,197
Scaffold_1 170624 . T C 14.176 PASS DP=17;VDB=0.862672;SGB=-0.511536;RPB=0.964448;MQB=0.601066;MQSB=0.37005;BQB=0.921781;MQ0F=0;AF1=0.49999;AC1=1;DP4=10,3,0,3;MQ=39;FQ=17.1004;PV4=0.0357143,0.1592,0.318412,0.258216 GT:PL 0/1:44,0,217
Scaffold_1 177174 . G T 12.0443 PASS DP=4;VDB=0.68;SGB=-0.453602;MQ0F=0;AF1=1;AC1=2;DP4=0,0,2,0;MQ=60;FQ=-32.9882 GT:PL 1/1:43,6,0
Scaffold_1 178797 . C A 31.7673 PASS DP=2;VDB=0.06;SGB=-0.453602;MQ0F=0;AF1=1;AC1=2;DP4=0,0,0,2;MQ=60;FQ=-32.988 GT:PL 1/1:63,6,0
Scaffold_1 183648 . A G 32.0097 PASS DP=12;VDB=0.0900131;SGB=-0.511536;RPB=0.274945;MQB=0.183296;MQSB=0.895781;BQB=0.641538;MQ0F=0;AF1=0.5;AC1=1;DP4=4,3,2,1;MQ=51;FQ=35.0165;PV4=1,0.272369,0.00250683,1 GT:PL 0/1:62,0,193
Scaffold_1 183897 . A G 27.0155 PASS DP=16;VDB=0.0560361;SGB=-0.511536;RPB=0.334895;MQB=0.0368832;MQSB=1;BQB=0.987952;MQ0F=0;AF1=0.499999;AC1=1;DP4=3,8,1,2;MQ=56;FQ=30.0194;PV4=1,0.441573,1.24282e-06,1 GT:PL 0/1:57,0,255
Scaffold_1 183901 . G A 15.1417 PASS DP=16;VDB=0.0588947;SGB=-0.511536;RPB=0.283536;MQB=0.0342181;MQSB=0.992528;BQB=0.959189;MQ0F=0;AF1=0.499992;AC1=1;DP4=4,8,1,2;MQ=56;FQ=18.0829;PV4=1,0.270066,4.15479e-07,1 GT:PL 0/1:45,0,255
Scaffold_1 184310 . G T 16.1143 PASS DP=10;VDB=0.02;SGB=-0.453602;RPB=0.25;MQB=0.875;MQSB=0.857112;BQB=0.75;MQ0F=0;AF1=0.499994;AC1=1;DP4=3,5,2,0;MQ=58;FQ=19.069;PV4=0.444444,1,1,1 GT:PL 0/1:46,0,216
Scaffold_1 189473 . C A 22.0341 PASS DP=9;VDB=0.02;SGB=-0.453602;RPB=0.333333;MQB=1;MQSB=0.900802;BQB=1;MQ0F=0;AF1=0.499998;AC1=1;DP4=3,3,0,2;MQ=60;FQ=25.0286;PV4=0.464286,0.394243,1,1 GT:PL 0/1:52,0,196
Scaffold_1 190641 . G T 13.2188 PASS DP=10;VDB=0.02;SGB=-0.453602;RPB=0.25;MQB=1;MQSB=0.952347;BQB=0.8125;MQ0F=0;AF1=0.499987;AC1=1;DP4=3,5,2,0;MQ=60;FQ=16.1222;PV4=0.444444,0.443578,1,0.491669 GT:PL 0/1:43,0,214
Scaffold_1 196468 . C T 12.272 PASS DP=10;VDB=0.0707707;SGB=-0.556411;RPB=0.124046;MQB=0.124046;MQSB=0.62023;BQB=0.62023;MQ0F=0;AF1=0.499984;AC1=1;DP4=1,3,3,1;MQ=38;FQ=15.1496;PV4=0.485714,0.0894733,0.00177317,1 GT:PL 0/1:42,0,117
Scaffold_1 197314 . A G 36.0081 PASS DP=30;VDB=0.0866195;SGB=-0.683931;RPB=0.725753;MQB=0.000586449;MQSB=0.997674;BQB=0.753619;MQ0F=0.133333;AF1=0.5;AC1=1;DP4=11,3,12,1;MQ=38;FQ=39.0157;PV4=0.595556,0.186218,9.14001e-07,0.367857 GT:PL 0/1:66,0,227
Scaffold_1 198190 . A T 19.0611 PASS DP=72;VDB=0.497166;SGB=-0.683931;RPB=0.893042;MQB=2.66101e-05;MQSB=0.00279849;BQB=0.544918;MQ0F=0.569444;AF1=0.500005;AC1=1;DP4=29,25,12,1;MQ=17;FQ=16.6543;PV4=0.0112862,1,1,1 GT:PL 0/1:49,0,45
Scaffold_1 198270 . G A 16.1143 PASS DP=71;VDB=0.290319;SGB=-0.683931;RPB=0.99096;MQB=0.00204048;MQSB=0.0176952;BQB=0.779658;MQ0F=0.535211;AF1=0.499994;AC1=1;DP4=26,28,7,6;MQ=16;FQ=18.8067;PV4=0.765161,0.288291,1,0.165756 GT:PL 0/1:46,0,58
Scaffold_1 198303 . G A 13.2188 PASS DP=69;VDB=0.545162;SGB=-0.683931;RPB=0.980821;MQB=0.0371148;MQSB=0.244762;BQB=0.852088;MQ0F=0.463768;AF1=0.499987;AC1=1;DP4=24,28,6,7;MQ=18;FQ=16.1222;PV4=1,1,1,1 GT:PL 0/1:43,0,128
Scaffold_1 198322 . C T 98.0078 PASS DP=63;VDB=0.435229;SGB=-0.689466;RPB=0.0533536;MQB=0.022048;MQSB=0.250391;BQB=0.485576;MQ0F=0.380952;AF1=0.5;AC1=1;DP4=16,27,10,6;MQ=21;FQ=100.994;PV4=0.139119,0.22233,1,1 GT:PL 0/1:128,0,151
Scaffold_1 198802 . A G 23.5605 PASS DP=15;VDB=0.0901918;SGB=-0.616816;RPB=0.676634;MQB=0.0297292;MQSB=0.209611;BQB=0.99308;MQ0F=0.666667;AF1=1;AC1=2;DP4=5,4,1,5;MQ=14;FQ=-28.9912;PV4=0.286713,0.3237,1,0.228954 GT:PL 1/1:53,2,0
Scaffold_1 199555 . C T 14.1764 PASS DP=14;VDB=0.539554;SGB=-0.511536;RPB=0.447727;MQB=0.040184;MQSB=1;BQB=0.944459;MQ0F=0.357143;AF1=0.50004;AC1=1;DP4=1,9,1,2;MQ=20;FQ=9.7151;PV4=0.423077,0.165765,1,0.170296 GT:PL 0/1:44,0,37
Scaffold_1 199570 . C T 89.012 PASS DP=15;VDB=0.622148;SGB=-0.616816;RPB=0.534333;MQB=0.00914595;MQSB=0.501405;BQB=0.711573;MQ0F=0.333333;AF1=0.500499;AC1=1;DP4=1,8,3,3;MQ=23;FQ=3.01767;PV4=0.235165,0.0689044,1,0.0939551 GT:PL 0/1:119,0,27
Scaffold_1 199603 . G T 127.339 PASS DP=15;VDB=0.675225;SGB=-0.670168;RPB=0.778801;MQB=0.367879;MQSB=0.341108;BQB=0.960789;MQ0F=0.333333;AF1=0.543032;AC1=1;DP4=0,4,5,5;MQ=28;FQ=-19.0401;PV4=0.220779,0.282911,1,0.308581 GT:PL 0/1:157,0,8
Scaffold_1 199617 . G T 100.062 PASS DP=13;VDB=0.494358;SGB=-0.590765;RPB=0.148586;MQB=0.0297172;MQSB=0.124514;BQB=0.683497;MQ0F=0.384615;AF1=0.50636;AC1=1;DP4=0,6,3,2;MQ=30;FQ=-11.3185;PV4=0.0606061,1,1,1 GT:PL 0/1:130,0,16
Scaffold_1 199663 . G A 117.646 PASS DP=8;VDB=0.768087;SGB=-0.590765;RPB=0.300267;MQB=0.150134;MQSB=0.62023;BQB=0.450401;MQ0F=0.25;AF1=0.593902;AC1=1;DP4=1,2,3,2;MQ=39;FQ=-22.013;PV4=1,1,1,1 GT:PL 0/1:147,0,5
Scaffold_1 199746 . G A 12.0443 PASS DP=2;VDB=0.8;SGB=-0.453602;MQ0F=0;AF1=1;AC1=2;DP4=0,0,2,0;MQ=40;FQ=-32.9882 GT:PL 1/1:43,6,0
Scaffold_1 199785 . T A 36.9729 PASS DP=3;VDB=0.868052;SGB=-0.511536;MQSB=1;MQ0F=0;AF1=1;AC1=2;DP4=0,0,2,1;MQ=40;FQ=-35.9869 GT:PL 1/1:69,9,0
Scaffold_1 199806 . G A 29.9763 PASS DP=3;VDB=0.868052;SGB=-0.511536;MQSB=1;MQ0F=0;AF1=1;AC1=2;DP4=0,0,2,1;MQ=40;FQ=-35.9869 GT:PL 1/1:62,9,0
Scaffold_1 199840 . C T 32.1277 PASS DP=4;VDB=0.748679;SGB=-0.511536;RPB=1;MQB=1;MQSB=1;BQB=1;MQ0F=0.25;AF1=1;AC1=2;DP4=0,1,1,2;MQ=28;FQ=-31.9885;PV4=1,1,1,0.333333 GT:PL 1/1:63,5,0
Scaffold_1 210775 . T C 11.3381 PASS DP=15;VDB=0.814281;SGB=-0.511536;RPB=0.880202;MQB=0.0492711;MQSB=0.785785;BQB=0.959189;MQ0F=0;AF1=0.49998;AC1=1;DP4=6,6,2,1;MQ=56;FQ=14.1838;PV4=1,0.481844,0.000114487,1 GT:PL 0/1:41,0,255
Scaffold_1 210955 . G A 38.0077 PASS DP=12;VDB=0.965037;SGB=-0.511536;RPB=0.824834;MQB=0.274945;MQSB=0.727822;BQB=0.366593;MQ0F=0;AF1=0.5;AC1=1;DP4=3,4,1,2;MQ=51;FQ=41.0155;PV4=1,1,0.121949,1 GT:PL 0/1:68,0,160
Scaffold_1 210968 . G A 31.0104 PASS DP=10;VDB=0.761018;SGB=-0.556411;RPB=0.783809;MQB=0.111973;MQSB=0.895781;BQB=1.00775;MQ0F=0;AF1=0.5;AC1=1;DP4=2,4,2,2;MQ=48;FQ=34.0168;PV4=1,1,0.00643704,1 GT:PL 0/1:61,0,152
Scaffold_1 210978 . A T 41.0074 PASS DP=10;VDB=0.751039;SGB=-0.556411;RPB=0.868321;MQB=0.124046;MQSB=0.900802;BQB=0.868321;MQ0F=0;AF1=0.5;AC1=1;DP4=1,3,2,2;MQ=48;FQ=44.0153;PV4=1,1,0.00968116,0.177959 GT:PL 0/1:71,0,119
Scaffold_1 211055 . A G 21.0411 PASS DP=10;VDB=0.142856;SGB=-0.511536;RPB=0.733186;MQB=0.366593;MQSB=0.5;BQB=0.458241;MQ0F=0;AF1=0.499998;AC1=1;DP4=1,6,1,2;MQ=48;FQ=24.0321;PV4=1,0.228698,0.112272,0.0664005 GT:PL 0/1:51,0,142
Scaffold_1 211057 . C T 29.0123 PASS DP=10;VDB=0.0506481;SGB=-0.511536;RPB=0.900802;MQB=0.150134;MQSB=0.166667;BQB=0.900802;MQ0F=0;AF1=0.5;AC1=1;DP4=0,5,2,1;MQ=52;FQ=32.0178;PV4=0.107143,0.362302,0.00893458,1 GT:PL 0/1:59,0,122
Scaffold_1 211068 . G T 23.0285 PASS DP=10;VDB=0.0499763;SGB=-0.556411;RPB=0.649731;MQB=0.0812164;MQSB=0.428571;BQB=0.243649;MQ0F=0;AF1=0.499999;AC1=1;DP4=0,5,2,2;MQ=49;FQ=26.0258;PV4=0.166667,0.0170592,0.00361342,0.177826 GT:PL 0/1:53,0,123
Scaffold_1 211753 . A T 26.0178 PASS DP=21;VDB=0.0435222;SGB=-0.590765;RPB=0.331306;MQB=0.6821;MQSB=0.838046;BQB=0.896474;MQ0F=0.285714;AF1=0.500006;AC1=1;DP4=5,2,3,2;MQ=21;FQ=18.6605;PV4=1,1,1,0.11441 GT:PL 0/1:56,0,46
Scaffold_1 211819 . C A 25.0206 PASS DP=13;VDB=0.125998;SGB=-0.590765;RPB=0.0952347;MQB=0.857112;MQSB=0.183296;BQB=0.428556;MQ0F=0.230769;AF1=0.500005;AC1=1;DP4=4,1,3,2;MQ=21;FQ=18.5608;PV4=1,1,1,1 GT:PL 0/1:55,0,46
Scaffold_1 220887 . T C 201.033 PASS DP=8;VDB=0.217232;SGB=-0.651104;MQSB=0.900802;MQ0F=0;AF1=1;AC1=2;DP4=0,0,3,5;MQ=60;FQ=-50.986 GT:PL 1/1:234,24,0
Scaffold_1 225890 . C A 16.1143 PASS DP=11;VDB=0.02;SGB=-0.453602;RPB=0;MQB=1;MQSB=1.00775;BQB=0.75;MQ0F=0;AF1=0.499994;AC1=1;DP4=4,4,0,2;MQ=60;FQ=19.069;PV4=0.466667,1,1,0.0104608 GT:PL 0/1:46,0,220
Scaffold_1 226446 . A T 13.2188 PASS DP=16;VDB=0.0649539;SGB=-0.511536;RPB=0.0368832;MQB=0.0368832;MQSB=0.509156;BQB=0.646383;MQ0F=0;AF1=0.499987;AC1=1;DP4=5,6,3,0;MQ=56;FQ=16.1222;PV4=0.208791,1,0.000286934,1 GT:PL 0/1:43,0,253
Scaffold_1 226466 . G C 10.42 PASS DP=16;VDB=0.0532881;SGB=-0.511536;RPB=0.0342181;MQB=0.0342181;MQSB=0.477935;BQB=0.317132;MQ0F=0;AF1=0.499975;AC1=1;DP4=5,7,3,0;MQ=56;FQ=13.2265;PV4=0.2,1,0.000153219,1 GT:PL 0/1:40,0,254
Scaffold_1 226471 . G A 18.0749 PASS DP=12;VDB=0.0532881;SGB=-0.511536;RPB=0.0443614;MQB=0.0443614;MQSB=0.253351;BQB=0.983051;MQ0F=0;AF1=0.499996;AC1=1;DP4=2,7,3,0;MQ=55;FQ=21.0492;PV4=0.0454545,1,0.00101397,1 GT:PL 0/1:48,0,205
Scaffold_1 226472 . A C 21.0411 PASS DP=12;VDB=0.0481132;SGB=-0.511536;RPB=0.0497871;MQB=0.0497871;MQSB=0.12058;BQB=0.829029;MQ0F=0;AF1=0.499998;AC1=1;DP4=1,7,3,0;MQ=55;FQ=24.0321;PV4=0.0242424,1,0.00191499,1 GT:PL 0/1:51,0,172
Scaffold_1 226476 . T G 20.0499 PASS DP=11;VDB=0.0481132;SGB=-0.511536;RPB=0.0916482;MQB=0.0916482;MQSB=0.333321;BQB=0.458241;MQ0F=0;AF1=0.499997;AC1=1;DP4=2,5,3,0;MQ=55;FQ=23.0366;PV4=0.166667,0.0232248,0.00363067,1 GT:PL 0/1:50,0,190
Scaffold_1 226480 . T C 21.0411 PASS DP=11;VDB=0.0481132;SGB=-0.511536;RPB=0.0497871;MQB=0.0497871;MQSB=0.297172;BQB=0.954207;MQ0F=0;AF1=0.499998;AC1=1;DP4=2,6,3,0;MQ=55;FQ=24.0321;PV4=0.0606061,1,0.00191499,1 GT:PL 0/1:51,0,192
Scaffold_1 226523 . C T 15.1417 PASS DP=16;VDB=0.0312982;SGB=-0.511536;RPB=0.973096;MQB=0.0368832;MQSB=0.606531;BQB=0.693041;MQ0F=0;AF1=0.499992;AC1=1;DP4=6,5,3,0;MQ=56;FQ=18.0829;PV4=0.258242,1,0.000286934,1 GT:PL 0/1:45,0,255
Scaffold_1 226537 . T A 22.0341 PASS DP=15;VDB=0.0249187;SGB=-0.511536;RPB=0.597928;MQB=0.040184;MQSB=0.748798;BQB=0.597928;MQ0F=0;AF1=0.499998;AC1=1;DP4=7,3,3,0;MQ=56;FQ=25.0286;PV4=0.527972,1,0.000538638,1 GT:PL 0/1:52,0,230
Scaffold_1 238884 . G T 25.0205 PASS DP=9;VDB=0.02;SGB=-0.453602;RPB=0;MQB=1;MQSB=1.01283;BQB=1;MQ0F=0;AF1=0.499999;AC1=1;DP4=2,3,2,0;MQ=60;FQ=28.0219;PV4=0.428571,0.335313,1,0.209498 GT:PL 0/1:55,0,170
Scaffold_1 241082 . G T 31.0104 PASS DP=12;VDB=0.0221621;SGB=-0.511536;RPB=0.962269;MQB=1;MQSB=1;BQB=0.962269;MQ0F=0;AF1=0.5;AC1=1;DP4=4,5,0,3;MQ=60;FQ=34.0168;PV4=0.490909,1,1,1 GT:PL 0/1:61,0,214
Scaffold_1 241359 . G T 28.0137 PASS DP=6;VDB=0.02;SGB=-0.453602;RPB=1;MQB=1;MQSB=0.861511;BQB=0.75;MQ0F=0;AF1=0.5;AC1=1;DP4=3,1,0,2;MQ=60;FQ=31.0185;PV4=0.4,1,1,1 GT:PL 0/1:58,0,117
Scaffold_1 241554 . A G 30.0112 PASS DP=13;VDB=0.104401;SGB=-0.662043;RPB=0.341501;MQB=0.0211283;MQSB=0.920266;BQB=1;MQ0F=0.153846;AF1=0.5;AC1=1;DP4=1,3,6,3;MQ=36;FQ=33.0172;PV4=0.265734,1,9.12037e-06,1 GT:PL 0/1:60,0,109
Scaffold_1 252735 . G A 31.0104 PASS DP=5;VDB=0.02;SGB=-0.453602;RPB=0.666667;MQB=1;MQSB=1;BQB=1;MQ0F=0;AF1=0.5;AC1=1;DP4=2,1,0,2;MQ=60;FQ=34.0164;PV4=0.4,1,1,1 GT:PL 0/1:61,0,101
Scaffold_1 262654 . G T 16.1143 PASS DP=11;VDB=0.02;SGB=-0.453602;RPB=0.25;MQB=0.875;MQSB=0.783809;BQB=1;MQ0F=0;AF1=0.499994;AC1=1;DP4=2,6,2,0;MQ=58;FQ=19.069;PV4=0.133333,0.381243,1,1 GT:PL 0/1:46,0,205
Scaffold_1 277438 . G A 31.0104 PASS DP=18;VDB=0.472095;SGB=-0.556411;RPB=0.236649;MQB=0.346864;MQSB=0.851779;BQB=0.88901;MQ0F=0;AF1=0.5;AC1=1;DP4=7,5,4,0;MQ=58;FQ=34.0168;PV4=0.244505,0.17294,0.00296257,1 GT:PL 0/1:61,0,251
Scaffold_1 277439 . G A 46.0072 PASS DP=18;VDB=0.472095;SGB=-0.556411;RPB=0.188162;MQB=0.356561;MQSB=0.829029;BQB=0.735784;MQ0F=0;AF1=0.5;AC1=1;DP4=6,5,4,0;MQ=58;FQ=49.0153;PV4=0.230769,1,0.00432532,1 GT:PL 0/1:76,0,217
Scaffold_1 277444 . G A 44.0073 PASS DP=20;VDB=0.472095;SGB=-0.556411;RPB=0.486752;MQB=0.324652;MQSB=0.898397;BQB=0.135335;MQ0F=0;AF1=0.5;AC1=1;DP4=10,5,4,0;MQ=58;FQ=47.0153;PV4=0.530444,1,0.000962283,1 GT:PL 0/1:74,0,254
Scaffold_1 277504 . G A 26.0177 PASS DP=17;VDB=0.607612;SGB=-0.511536;RPB=0.851535;MQB=0.67781;MQSB=0.91051;BQB=0.639909;MQ0F=0;AF1=0.499999;AC1=1;DP4=5,9,3,0;MQ=59;FQ=29.0205;PV4=0.0823529,1,0.0126146,1 GT:PL 0/1:56,0,255
Scaffold_1 277513 . G A 32.0097 PASS DP=16;VDB=0.607612;SGB=-0.511536;RPB=0.729713;MQB=0.687289;MQSB=0.868815;BQB=0.976835;MQ0F=0;AF1=0.5;AC1=1;DP4=3,9,3,0;MQ=59;FQ=35.0165;PV4=0.043956,1,0.0200465,1 GT:PL 0/1:62,0,255
Scaffold_1 277627 . A G 81.0075 PASS DP=13;VDB=0.842333;SGB=-0.590765;RPB=0.547344;MQB=0.0137638;MQSB=0.898397;BQB=0.84246;MQ0F=0;AF1=0.5;AC1=1;DP4=2,6,2,3;MQ=53;FQ=84.0157;PV4=1,0.109944,0.000266531,1 GT:PL 0/1:111,0,207
Scaffold_1 277635 . A G 15.1417 PASS DP=10;VDB=0.5;SGB=-0.511536;RPB=0.750668;MQB=0.150134;MQSB=0.900802;BQB=0.450401;MQ0F=0;AF1=0.499992;AC1=1;DP4=2,3,1,2;MQ=52;FQ=18.0829;PV4=1,0.0479499,0.00348109,1 GT:PL 0/1:45,0,157
Scaffold_1 277644 . G A 17.0924 PASS DP=8;VDB=0.5;SGB=-0.511536;RPB=0.861511;MQB=0.28717;MQSB=0.861511;BQB=0.861511;MQ0F=0;AF1=0.499995;AC1=1;DP4=2,1,1,2;MQ=48;FQ=20.0579;PV4=1,1,0.0212902,1 GT:PL 0/1:47,0,98
Scaffold_1 277659 . T C 45.0072 PASS DP=8;VDB=0.292086;SGB=-0.556411;RPB=1.01283;MQB=0.202566;MQSB=0.810265;BQB=0.607698;MQ0F=0;AF1=0.5;AC1=1;DP4=2,1,1,3;MQ=47;FQ=47.981;PV4=0.485714,1,0.0146041,0.218294 GT:PL 0/1:75,0,96
Scaffold_1 277706 . C G 66.0074 PASS DP=12;VDB=0.479322;SGB=-0.616816;RPB=0.47436;MQB=0.0169414;MQSB=0.125315;BQB=0.542126;MQ0F=0;AF1=0.5;AC1=1;DP4=4,2,0,6;MQ=51;FQ=69.0155;PV4=0.0606061,0.10889,0.00283479,1 GT:PL 0/1:96,0,161
Scaffold_1 277707 . G A 65.0073 PASS DP=12;VDB=0.479322;SGB=-0.616816;RPB=0.47436;MQB=0.0169414;MQSB=0.125315;BQB=0.71154;MQ0F=0;AF1=0.5;AC1=1;DP4=4,2,0,6;MQ=51;FQ=68.0155;PV4=0.0606061,0.239154,0.00283479,1 GT:PL 0/1:95,0,155
Scaffold_1 277733 . A G 51.0072 PASS DP=12;VDB=0.444886;SGB=-0.590765;RPB=0.0594345;MQB=0.0297172;MQSB=0.200967;BQB=0.950952;MQ0F=0;AF1=0.5;AC1=1;DP4=4,2,0,5;MQ=52;FQ=54.0154;PV4=0.0606061,0.131158,0.00502864,0.0545066 GT:PL 0/1:81,0,163
Scaffold_1 277738 . T C 67.0074 PASS DP=11;VDB=0.409395;SGB=-0.590765;RPB=0.142852;MQB=0.0476173;MQSB=0.274945;BQB=0.857112;MQ0F=0;AF1=0.5;AC1=1;DP4=3,2,0,5;MQ=51;FQ=70.0128;PV4=0.166667,1,0.00949456,0.192253 GT:PL 0/1:97,0,129
Scaffold_1 277746 . G A 23.0285 PASS DP=9;VDB=0.131948;SGB=-0.511536;RPB=0.346719;MQB=0.115573;MQSB=0.406082;BQB=0.924584;MQ0F=0;AF1=0.499999;AC1=1;DP4=4,2,0,3;MQ=54;FQ=26.0258;PV4=0.166667,1,0.0157356,1 GT:PL 0/1:53,0,163
Scaffold_1 277747 . C T 11.3381 PASS DP=9;VDB=0.137328;SGB=-0.511536;RPB=0.346719;MQB=0.115573;MQSB=0.406082;BQB=0.809011;MQ0F=0;AF1=0.49998;AC1=1;DP4=4,2,0,3;MQ=54;FQ=14.1838;PV4=0.166667,0.32505,0.0157356,1 GT:PL 0/1:41,0,162
Scaffold_1 277748 . A C 15.1417 PASS DP=9;VDB=0.126715;SGB=-0.511536;RPB=0.346719;MQB=0.115573;MQSB=0.406082;BQB=0.809011;MQ0F=0;AF1=0.499992;AC1=1;DP4=4,2,0,3;MQ=54;FQ=18.0829;PV4=0.166667,0.23193,0.0157356,1 GT:PL 0/1:45,0,168
Scaffold_1 277752 . G A 26.0177 PASS DP=9;VDB=0.126715;SGB=-0.511536;RPB=0.346719;MQB=0.115573;MQSB=0.406082;BQB=0.809011;MQ0F=0;AF1=0.499999;AC1=1;DP4=4,2,0,3;MQ=54;FQ=29.0205;PV4=0.166667,1,0.0157356,1 GT:PL 0/1:56,0,165
Scaffold_1 277764 . C T 28.0137 PASS DP=8;VDB=0.121629;SGB=-0.511536;RPB=0.150134;MQB=0.150134;MQSB=0.450401;BQB=0.450401;MQ0F=0;AF1=0.5;AC1=1;DP4=3,2,0,3;MQ=54;FQ=31.0185;PV4=0.196429,1,0.0265118,0.109972 GT:PL 0/1:58,0,130
Scaffold_1 277768 . A G 31.0104 PASS DP=8;VDB=0.11189;SGB=-0.511536;RPB=0.202566;MQB=0.202566;MQSB=0.405132;BQB=0.607698;MQ0F=0;AF1=0.5;AC1=1;DP4=3,1,0,3;MQ=53;FQ=34.0167;PV4=0.142857,1,0.0449814,0.142795 GT:PL 0/1:61,0,107
Scaffold_1 277770 . G A 28.0137 PASS DP=8;VDB=0.121629;SGB=-0.511536;RPB=0.150134;MQB=0.150134;MQSB=0.450401;BQB=0.450401;MQ0F=0;AF1=0.5;AC1=1;DP4=3,2,0,3;MQ=54;FQ=31.0185;PV4=0.196429,1,0.0265118,0.109972 GT:PL 0/1:58,0,119
Scaffold_1 277787 . G A 46.0072 PASS DP=8;VDB=0.235765;SGB=-0.511536;RPB=0.405132;MQB=0.405132;MQSB=0.607698;BQB=0.810265;MQ0F=0;AF1=0.5;AC1=1;DP4=2,2,1,2;MQ=57;FQ=49.0152;PV4=1,0.260862,0.100561,0.142795 GT:PL 0/1:76,0,122
Scaffold_1 278430 . A C 15.1417 PASS DP=8;VDB=0.68;SGB=-0.453602;RPB=0.5;MQB=0;MQSB=0;BQB=0.5;MQ0F=0;AF1=0.499992;AC1=1;DP4=0,4,2,0;MQ=53;FQ=18.0776;PV4=0.0666667,1,0.000548697,0.0889039 GT:PL 0/1:45,0,74
Scaffold_1 278600 . C T 26.0177 PASS DP=17;VDB=0.0860477;SGB=-0.511536;RPB=0.931063;MQB=0.982301;MQSB=0.573029;BQB=0.851535;MQ0F=0;AF1=0.499999;AC1=1;DP4=8,6,3,0;MQ=53;FQ=29.0205;PV4=0.514706,1,1,1 GT:PL 0/1:56,0,255
Scaffold_1 278612 . C G 42.0073 PASS DP=20;VDB=0.197286;SGB=-0.590765;RPB=0.657047;MQB=0.999048;MQSB=0.604224;BQB=0.332554;MQ0F=0;AF1=0.5;AC1=1;DP4=10,5,5,0;MQ=52;FQ=45.0154;PV4=0.266318,0.0214585,1,0.389271 GT:PL 0/1:72,0,255
Scaffold_1 278626 . C T 69.0074 PASS DP=20;VDB=0.184963;SGB=-0.590765;RPB=0.898397;MQB=0.983003;MQSB=0.567346;BQB=0.651439;MQ0F=0;AF1=0.5;AC1=1;DP4=9,5,5,0;MQ=51;FQ=72.0156;PV4=0.256536,1,1,1 GT:PL 0/1:99,0,255
Scaffold_1 278647 . A C 79.0075 PASS DP=19;VDB=0.033316;SGB=-0.636426;RPB=0.122456;MQB=0.0137638;MQSB=0.697274;BQB=0.887766;MQ0F=0;AF1=0.5;AC1=1;DP4=7,3,6,1;MQ=50;FQ=82.0157;PV4=0.602941,1,0.000538089,1 GT:PL 0/1:109,0,233
Scaffold_1 278673 . C T 94.0077 PASS DP=18;VDB=0.311141;SGB=-0.616816;RPB=0.948436;MQB=0.221821;MQSB=0.641825;BQB=0.998531;MQ0F=0;AF1=0.5;AC1=1;DP4=8,2,5,1;MQ=47;FQ=97.0137;PV4=1,0.456742,1,0.103539 GT:PL 0/1:124,0,157
Scaffold_1 278678 . C T 171.009 PASS DP=18;VDB=0.13615;SGB=-0.651104;RPB=0.68614;MQB=0.0289435;MQSB=0.643969;BQB=0.97357;MQ0F=0;AF1=0.5;AC1=1;DP4=6,1,6,2;MQ=48;FQ=84.0157;PV4=1,1,1,1 GT:PL 0/1:201,0,111
Scaffold_1 278739 . G A 24.0241 PASS DP=16;VDB=0.220755;SGB=-0.511536;RPB=0.900802;MQB=0.900802;MQSB=0.62023;BQB=0.300267;MQ0F=0;AF1=0.499999;AC1=1;DP4=2,3,2,1;MQ=51;FQ=27.0236;PV4=1,0.0978886,0.487822,1 GT:PL 0/1:54,0,156
Scaffold_1 278745 . T A 15.1417 PASS DP=16;VDB=0.44;SGB=-0.453602;RPB=0.555556;MQB=0.666667;MQSB=0.954207;BQB=0.5;MQ0F=0;AF1=0.499992;AC1=1;DP4=2,7,1,1;MQ=46;FQ=18.0829;PV4=0.490909,1,1,1 GT:PL 0/1:45,0,191
Scaffold_1 278818 . C A 119.076 PASS DP=13;VDB=0.735946;SGB=-0.616816;RPB=0.833333;MQB=0.166667;MQSB=1;BQB=0;MQ0F=0;AF1=0.508032;AC1=1;DP4=0,2,1,5;MQ=49;FQ=-12.2521;PV4=1,1,1,0.297076 GT:PL 0/1:149,0,15
Scaffold_1 278852 . T C 46.0072 PASS DP=11;VDB=0.131345;SGB=-0.556411;RPB=0.241161;MQB=0.12058;MQSB=1;BQB=0.200967;MQ0F=0;AF1=0.5;AC1=1;DP4=1,6,0,4;MQ=49;FQ=49.0153;PV4=1,1,0.00826233,0.379936 GT:PL 0/1:76,0,160
Scaffold_1 278863 . A T 12.272 PASS DP=10;VDB=0.134765;SGB=-0.556411;RPB=0.335918;MQB=0.167959;MQSB=1;BQB=0.895781;MQ0F=0;AF1=0.499984;AC1=1;DP4=1,5,0,4;MQ=47;FQ=15.1496;PV4=1,1,0.015445,1 GT:PL 0/1:42,0,145
Scaffold_1 278931 . C G 14.176 PASS DP=9;VDB=0.131948;SGB=-0.511536;RPB=0.115573;MQB=0.924584;MQSB=1;BQB=0.924584;MQ0F=0;AF1=0.49999;AC1=1;DP4=1,5,0,3;MQ=46;FQ=17.1004;PV4=1,1,0.40327,1 GT:PL 0/1:44,0,130
Scaffold_1 278938 . T A 18.0749 PASS DP=9;VDB=0.692431;SGB=-0.556411;RPB=0.62023;MQB=0.868321;BQB=0.62023;MQ0F=0;AF1=0.499996;AC1=1;DP4=0,4,0,4;MQ=44;FQ=21.0474;PV4=1,0.224932,0.477087,1 GT:PL 0/1:48,0,82
Scaffold_1 278959 . C A 18.0749 PASS DP=4;VDB=0.02;SGB=-0.453602;RPB=0;MQB=1;MQSB=1;BQB=0.75;MQ0F=0;AF1=0.499996;AC1=1;DP4=1,1,0,2;MQ=47;FQ=20.7199;PV4=1,0.35791,0.253817,1 GT:PL 0/1:48,0,59
Scaffold_1 278991 . T A 33.0091 PASS DP=4;VDB=0.02;SGB=-0.453602;RPB=1;MQB=1;BQB=0.5;MQ0F=0;AF1=0.5;AC1=1;DP4=0,2,0,2;MQ=47;FQ=31.2539;PV4=1,1,0.253817,1 GT:PL 0/1:63,0,60
Scaffold_1 278999 . C T 36.0094 PASS DP=3;VDB=0.02;SGB=-0.453602;RPB=1;MQB=1;BQB=1;MQ0F=0;AF1=0.500158;AC1=1;DP4=0,1,0,2;MQ=49;FQ=6.20321;PV4=1,1,0,1 GT:PL 0/1:66,0,32
Scaffold_1 279258 . C T 43.7647 PASS DP=2;VDB=0.36;SGB=-0.453602;MQ0F=0;AF1=1;AC1=2;DP4=0,0,2,0;MQ=60;FQ=-32.988 GT:PL 1/1:75,6,0
Scaffold_1 279286 . A T 31.0106 PASS DP=5;VDB=0.160333;SGB=-0.511536;RPB=0;MQB=0;MQSB=0;BQB=0;MQ0F=0;AF1=0.500025;AC1=1;DP4=2,0,0,3;MQ=46;FQ=13.1938;PV4=0.1,1,0.0676264,1 GT:PL 0/1:61,0,40
Scaffold_1 279626 . C T 67.9724 PASS DP=3;VDB=0.160332;SGB=-0.511536;MQ0F=0;AF1=1;AC1=2;DP4=0,0,0,3;MQ=60;FQ=-35.9869 GT:PL 1/1:100,9,0
Scaffold_1 280330 . A G 11.1139 PASS DP=2;VDB=0.36;SGB=-0.453602;MQ0F=0.5;AF1=1;AC1=2;DP4=0,0,2,0;MQ=28;FQ=-32.9882 GT:PL 1/1:42,6,0
Scaffold_1 280359 . G T 11.1139 PASS DP=2;VDB=0.36;SGB=-0.453602;MQ0F=0.5;AF1=1;AC1=2;DP4=0,0,2,0;MQ=28;FQ=-32.9882 GT:PL 1/1:42,6,0
Scaffold_1 281037 . G A 10.2001 PASS DP=2;VDB=0.88;SGB=-0.453602;MQ0F=0;AF1=1;AC1=2;DP4=0,0,2,0;MQ=28;FQ=-32.9883 GT:PL 1/1:41,6,0
Scaffold_1 281497 . A C 95.4602 PASS DP=6;VDB=0.0533436;SGB=-0.556411;RPB=0.5;MQB=0;MQSB=0.28717;BQB=0.75;MQ0F=0;AF1=0.829413;AC1=1;DP4=2,0,1,3;MQ=46;FQ=-25.9966;PV4=0.4,1,1,0.130667 GT:PL 0/1:124,0,1
Scaffold_1 281514 . T A 70.0088 PASS DP=7;VDB=0.0533436;SGB=-0.556411;RPB=1.01283;MQB=0.202566;MQSB=0.202566;BQB=0.607698;MQ0F=0;AF1=0.500158;AC1=1;DP4=3,0,1,3;MQ=46;FQ=6.20452;PV4=0.142857,0.167637,1,1 GT:PL 0/1:100,0,32
Scaffold_1 281539 . T G 54.0076 PASS DP=7;VDB=0.0221621;SGB=-0.511536;RPB=0.861511;MQB=0.28717;MQSB=0.28717;BQB=0.861511;MQ0F=0;AF1=0.50004;AC1=1;DP4=3,0,0,3;MQ=47;FQ=11.3456;PV4=0.1,0.18695,1,1 GT:PL 0/1:84,0,38
Scaffold_1 281550 . A T 54.0076 PASS DP=7;VDB=0.0221621;SGB=-0.511536;RPB=0.861511;MQB=0.28717;MQSB=0.28717;BQB=0.861511;MQ0F=0;AF1=0.50004;AC1=1;DP4=3,0,0,3;MQ=47;FQ=11.3456;PV4=0.1,1,1,1 GT:PL 0/1:84,0,38
Scaffold_1 281553 . C A 12.272 PASS DP=7;VDB=0.02;SGB=-0.453602;RPB=0.5;MQB=0;MQSB=0;BQB=0.75;MQ0F=0;AF1=0.499985;AC1=1;DP4=4,0,0,2;MQ=43;FQ=15.0186;PV4=0.0666667,0.328083,1,1 GT:PL 0/1:42,0,57
Scaffold_1 281763 . A C 22.7906 PASS DP=8;VDB=0.0218651;SGB=-0.590765;RPB=0.450401;MQB=0.900802;MQSB=0.300267;BQB=0.300267;MQ0F=0;AF1=1;AC1=2;DP4=1,2,4,1;MQ=18;FQ=-26.9944;PV4=0.464286,1,1,1 GT:PL 0/1:51,0,0
Scaffold_1 281790 . C T 25.0314 PASS DP=11;VDB=0.43429;SGB=-0.556411;RPB=0.974597;MQB=0.89338;MQSB=0.162433;BQB=0.730948;MQ0F=0;AF1=0.501255;AC1=1;DP4=3,2,2,2;MQ=21;FQ=-5.44696;PV4=1,1,1,1 GT:PL 0/1:55,0,23
Scaffold_1 282806 . A G 42.0074 PASS DP=5;VDB=0.327477;SGB=-0.511536;RPB=0.833333;MQB=1;MQSB=1;BQB=0.833333;MQ0F=0;AF1=0.500004;AC1=1;DP4=1,1,3,0;MQ=35;FQ=21.032;PV4=0.4,1,0.40607,1 GT:PL 0/1:72,0,48
Scaffold_1 282826 . T G 40.0075 PASS DP=6;VDB=0.327477;SGB=-0.511536;RPB=0.574341;MQB=0.861511;MQSB=1;BQB=0.861511;MQ0F=0;AF1=0.5;AC1=1;DP4=2,1,3,0;MQ=32;FQ=34.3777;PV4=1,1,1,1 GT:PL 0/1:70,0,62
Scaffold_1 282827 . C T 37.0079 PASS DP=6;VDB=0.327477;SGB=-0.511536;RPB=0.574341;MQB=0.861511;MQSB=1;BQB=0.574341;MQ0F=0;AF1=0.5;AC1=1;DP4=2,1,3,0;MQ=32;FQ=33.8236;PV4=1,0.0856741,1,1 GT:PL 0/1:67,0,62
Scaffold_1 282862 . G A 26.0177 PASS DP=8;VDB=0.814281;SGB=-0.511536;RPB=1.01283;MQB=0.810265;MQSB=1;BQB=0.405132;MQ0F=0;AF1=0.499999;AC1=1;DP4=3,1,3,0;MQ=35;FQ=29.0196;PV4=1,0.0727953,1,0.0466082 GT:PL 0/1:56,0,93
Scaffold_1 283093 . C T 24.1311 PASS DP=7;VDB=0.566962;SGB=-0.556411;RPB=1.01283;MQB=0.810265;MQSB=0.810265;BQB=0.607698;MQ0F=0;AF1=0.512851;AC1=1;DP4=2,1,1,3;MQ=23;FQ=-14.156;PV4=0.485714,1,1,1 GT:PL 0/1:54,0,13
Scaffold_1 283096 . T C 34.4566 PASS DP=7;VDB=0.387565;SGB=-0.590765;RPB=1;MQB=1;MQSB=0.5;BQB=1;MQ0F=0;AF1=1;AC1=2;DP4=1,0,1,4;MQ=24;FQ=-33.9875;PV4=0.333333,0.352,1,0.208923 GT:PL 1/1:66,7,0
Scaffold_1 283173 . C T 50.1276 PASS DP=7;VDB=0.0381671;SGB=-0.556411;RPB=1;MQB=0.5;MQSB=0.25;BQB=0.875;MQ0F=0;AF1=1;AC1=2;DP4=1,1,1,3;MQ=29;FQ=-27.9926;PV4=1,1,1,1 GT:PL 1/1:79,1,0
Scaffold_1 283220 . G A 23.0319 PASS DP=6;VDB=0.0389723;SGB=-0.511536;RPB=0.861511;MQB=0.861511;MQSB=0.25;BQB=0.861511;MQ0F=0;AF1=0.500395;AC1=1;DP4=1,2,1,2;MQ=27;FQ=3.53958;PV4=1,1,1,1 GT:PL 0/1:53,0,28
Scaffold_1 285675 . A G 12.272 PASS DP=8;VDB=0.074936;SGB=-0.511536;RPB=0.750668;MQB=0.750668;MQSB=0.868321;BQB=0.900802;MQ0F=0;AF1=0.499984;AC1=1;DP4=2,3,2,1;MQ=42;FQ=15.1496;PV4=1,0.484601,0.260599,0.321297 GT:PL 0/1:42,0,93
Scaffold_1 285681 . G A 20.0499 PASS DP=13;VDB=0.0550934;SGB=-0.556411;RPB=0.111973;MQB=0.895781;MQSB=0.895781;BQB=0.783809;MQ0F=0.153846;AF1=0.499997;AC1=1;DP4=3,3,1,3;MQ=36;FQ=23.0361;PV4=0.571429,0.322345,0.305493,0.0228783 GT:PL 0/1:50,0,90
Scaffold_1 285707 . C T 53.0072 PASS DP=17;VDB=0.130743;SGB=-0.590765;RPB=0.730199;MQB=0.366897;MQSB=0.238312;BQB=0.663189;MQ0F=0.176471;AF1=0.5;AC1=1;DP4=7,4,2,3;MQ=30;FQ=55.961;PV4=0.596154,1,1,1 GT:PL 0/1:83,0,102
Scaffold_1 285708 . G T 29.0123 PASS DP=18;VDB=0.140618;SGB=-0.670168;RPB=0.650664;MQB=0.195976;MQSB=0.708895;BQB=0.318527;MQ0F=0.166667;AF1=0.5;AC1=1;DP4=4,3,6,4;MQ=33;FQ=32.0177;PV4=1,1,0.0169126,1 GT:PL 0/1:59,0,110
Scaffold_1 285712 . A T 49.0072 PASS DP=21;VDB=0.116872;SGB=-0.590765;RPB=0.381255;MQB=0.406134;MQSB=0.472367;BQB=0.834376;MQ0F=0.142857;AF1=0.5;AC1=1;DP4=8,6,2,3;MQ=30;FQ=52.0153;PV4=0.628483,1,1,1 GT:PL 0/1:79,0,140
Scaffold_1 285804 . T G 30.0112 PASS DP=27;VDB=0.0816572;SGB=-0.636426;RPB=0.0906722;MQB=0.959982;MQSB=0.96464;BQB=0.940815;MQ0F=0.222222;AF1=0.5;AC1=1;DP4=13,4,2,5;MQ=25;FQ=33.0172;PV4=0.0605627,0.261051,1,0.479997 GT:PL 0/1:60,0,156
Scaffold_1 285818 . C T 36.0081 PASS DP=27;VDB=0.0128285;SGB=-0.651104;RPB=0.018063;MQB=0.969233;MQSB=0.705431;BQB=0.998458;MQ0F=0.222222;AF1=0.5;AC1=1;DP4=15,3,2,6;MQ=26;FQ=39.0157;PV4=0.00770991,0.27859,0.452484,0.130661 GT:PL 0/1:66,0,162
Scaffold_1 285870 . A G 41.0074 PASS DP=20;VDB=0.324419;SGB=-0.590765;RPB=0.980754;MQB=0.288308;MQSB=0.814433;BQB=0.76088;MQ0F=0.3;AF1=0.5;AC1=1;DP4=8,5,5,0;MQ=24;FQ=43.9937;PV4=0.24895,0.364854,1,1 GT:PL 0/1:71,0,94
Scaffold_1 285885 . T C 53.0115 PASS DP=17;VDB=0.0646747;SGB=-0.636426;RPB=0.640197;MQB=0.497296;MQSB=0.666667;BQB=0.948864;MQ0F=0.352941;AF1=0.500499;AC1=1;DP4=6,1,6,1;MQ=24;FQ=3.01766;PV4=1,0.325414,1,1 GT:PL 0/1:83,0,27
Scaffold_1 285919 . G A 23.0285 PASS DP=14;VDB=0.0221621;SGB=-0.511536;RPB=0.314383;MQB=0.239651;MQSB=0.898397;BQB=0.968368;MQ0F=0.285714;AF1=0.499999;AC1=1;DP4=6,4,3,0;MQ=25;FQ=26.0241;PV4=0.496504,0.369328,1,0.0486085 GT:PL 0/1:53,0,87
Scaffold_1 285956 . T C 19.061 PASS DP=14;VDB=0.459448;SGB=-0.556411;RPB=1;MQB=0.996401;MQSB=0.594978;BQB=0.543691;MQ0F=0.214286;AF1=0.499997;AC1=1;DP4=4,4,0,4;MQ=29;FQ=22.0421;PV4=0.208081,1,1,1 GT:PL 0/1:49,0,111
Scaffold_1 286137 . T A 56.0072 PASS DP=26;VDB=0.349195;SGB=-0.590765;RPB=0.997886;MQB=0.19028;MQSB=0.885548;BQB=0.981133;MQ0F=0.0769231;AF1=0.5;AC1=1;DP4=13,8,2,3;MQ=31;FQ=59.0154;PV4=0.619565,1,1,1 GT:PL 0/1:86,0,206
Scaffold_1 286145 . G A 58.0073 PASS DP=26;VDB=0.111502;SGB=-0.616816;RPB=0.344154;MQB=0.234136;MQSB=0.885548;BQB=0.782777;MQ0F=0.0769231;AF1=0.5;AC1=1;DP4=12,8,3,3;MQ=31;FQ=61.0154;PV4=1,0.147389,1,0.332451 GT:PL 0/1:88,0,224
Scaffold_1 286154 . G A 221.999 PASS DP=25;VDB=0.00881177;SGB=-0.692914;MQSB=0.739679;MQ0F=0.04;AF1=1;AC1=2;DP4=0,0,15,10;MQ=32;FQ=-101.987 GT:PL 1/1:255,75,0
Scaffold_1 286155 . C T 225.052 PASS DP=26;VDB=0.00286532;SGB=-0.692067;RPB=0.846427;MQB=0.10886;MQSB=0.739679;BQB=0.999423;MQ0F=0.0384615;AF1=0.505038;AC1=1;DP4=4,1,11,9;MQ=32;FQ=-10.4007;PV4=0.614625,0.313102,1,1 GT:PL 0/1:255,0,17
Scaffold_1 286163 . A C 221.999 PASS DP=27;VDB=0.00775732;SGB=-0.692914;MQSB=0.543691;MQ0F=0.037037;AF1=1;AC1=2;DP4=0,0,16,9;MQ=32;FQ=-101.987 GT:PL 1/1:255,75,0
Scaffold_1 286188 . T A 58.0073 PASS DP=28;VDB=0.114818;SGB=-0.616816;RPB=0.888235;MQB=0.246483;MQSB=0.825237;BQB=0.99815;MQ0F=0.0357143;AF1=0.5;AC1=1;DP4=14,6,3,3;MQ=31;FQ=61.0154;PV4=0.62785,1,1,1 GT:PL 0/1:88,0,213
Scaffold_1 286192 . A C 62.0073 PASS DP=28;VDB=0.111502;SGB=-0.616816;RPB=0.797953;MQB=0.172215;MQSB=0.906646;BQB=0.735496;MQ0F=0.0714286;AF1=0.5;AC1=1;DP4=16,6,3,3;MQ=30;FQ=65.0155;PV4=0.351839,1,1,1 GT:PL 0/1:92,0,205
Scaffold_1 286259 . T A 38.0077 PASS DP=17;VDB=0.679639;SGB=-0.616816;RPB=0.256376;MQB=0.465043;MQSB=0.463395;BQB=0.998265;MQ0F=0.0588235;AF1=0.5;AC1=1;DP4=6,3,5,1;MQ=23;FQ=34.0436;PV4=0.604396,1,1,0.0402457 GT:PL 0/1:68,0,62
Scaffold_1 286427 . C T 54.0072 PASS DP=24;VDB=0.0309211;SGB=-0.651104;RPB=0.742584;MQB=0.558035;MQSB=0.111111;BQB=0.764448;MQ0F=0.0833333;AF1=0.5;AC1=1;DP4=2,10,0,8;MQ=22;FQ=48.3764;PV4=0.494737,1,1,1 GT:PL 0/1:84,0,76
Scaffold_1 286457 . G A 29.0123 PASS DP=18;VDB=0.0414745;SGB=-0.590765;RPB=0.0529245;MQB=0.263231;MQSB=1;BQB=0.987578;MQ0F=0.166667;AF1=0.5;AC1=1;DP4=1,11,0,5;MQ=21;FQ=31.3793;PV4=1,1,1,0.0841049 GT:PL 0/1:59,0,67
Scaffold_1 286471 . A T 20.0499 PASS DP=17;VDB=0.0205346;SGB=-0.556411;RPB=0.125315;MQB=0.174611;MQSB=1;BQB=0.66348;MQ0F=0.176471;AF1=0.499998;AC1=1;DP4=1,12,0,4;MQ=21;FQ=22.902;PV4=1,1,1,0.494929 GT:PL 0/1:50,0,65
Scaffold_1 286781 . C T 20.551 PASS DP=4;VDB=0.202231;SGB=-0.556411;MQSB=1;MQ0F=0.25;AF1=1;AC1=2;DP4=0,0,1,3;MQ=19;FQ=-38.9864 GT:PL 1/1:53,12,0
Scaffold_1 286786 . T C 20.551 PASS DP=4;VDB=0.193383;SGB=-0.556411;MQSB=1;MQ0F=0.25;AF1=1;AC1=2;DP4=0,0,1,3;MQ=19;FQ=-38.9864 GT:PL 1/1:53,12,0
Scaffold_1 287218 . T C 98.2729 PASS DP=7;VDB=0.100421;SGB=-0.556411;RPB=0;MQB=0;MQSB=0.28717;BQB=1;MQ0F=0;AF1=0.533586;AC1=1;DP4=2,0,1,3;MQ=50;FQ=-18.0541;PV4=0.4,1,1,1 GT:PL 0/1:128,0,9
Scaffold_1 287227 . T C 114.522 PASS DP=7;VDB=0.0850649;SGB=-0.590765;RPB=0;MQB=0;MQSB=0.607698;BQB=0.6;MQ0F=0;AF1=0.571816;AC1=1;DP4=2,0,2,3;MQ=51;FQ=-21.0201;PV4=0.428571,0.231858,1,0.410944 GT:PL 0/1:144,0,6
Scaffold_1 287486 . A C 86.1425 PASS DP=7;VDB=0.0343724;SGB=-0.556411;RPB=0;MQB=0.25;MQSB=0.861511;BQB=0;MQ0F=0;AF1=0.516288;AC1=1;DP4=1,1,2,2;MQ=41;FQ=-15.1212;PV4=1,1,1,1 GT:PL 0/1:116,0,12
Scaffold_1 287488 . C T 69.0246 PASS DP=7;VDB=0.036866;SGB=-0.556411;RPB=0.202566;MQB=0.202566;MQSB=0.810265;BQB=0.810265;MQ0F=0;AF1=0.501994;AC1=1;DP4=2,1,2,2;MQ=38;FQ=-6.96162;PV4=1,1,1,1 GT:PL 0/1:99,0,21
Scaffold_1 287492 . A C 91.0098 PASS DP=7;VDB=0.184775;SGB=-0.556411;RPB=0.202566;MQB=0.202566;MQSB=0.607698;BQB=0.810265;MQ0F=0;AF1=0.50025;AC1=1;DP4=1,2,3,1;MQ=44;FQ=4.77417;PV4=0.485714,1,1,0.218294 GT:PL 0/1:121,0,30
Scaffold_1 287698 . T C 77.2194 PASS DP=6;VDB=0.472095;SGB=-0.556411;RPB=1;MQB=1;MQSB=1;BQB=1;MQ0F=0;AF1=0.526316;AC1=1;DP4=0,1,4,0;MQ=38;FQ=-17.0717;PV4=0.2,0.342519,1,1 GT:PL 0/1:107,0,10
Scaffold_1 287704 . G T 62.029 PASS DP=6;VDB=0.415588;SGB=-0.556411;RPB=0.5;MQB=0;MQSB=0;BQB=0.625;MQ0F=0;AF1=0.502513;AC1=1;DP4=0,2,4,0;MQ=35;FQ=-7.77799;PV4=0.0666667,0.249732,1,1 GT:PL 0/1:92,0,20
Scaffold_1 287795 . A C 31.7673 PASS DP=4;VDB=0.32;SGB=-0.453602;MQ0F=0;AF1=1;AC1=2;DP4=0,0,0,2;MQ=60;FQ=-32.988 GT:PL 1/1:63,6,0
Scaffold_1 288896 . G T 49.0072 PASS DP=10;VDB=0.0433485;SGB=-0.511536;RPB=0.450401;MQB=0.450401;BQB=0.600535;MQ0F=0;AF1=0.5;AC1=1;DP4=5,0,3,0;MQ=51;FQ=52.0146;PV4=1,1,0.0151486,1 GT:PL 0/1:79,0,117
Scaffold_1 288897 . G A 49.0072 PASS DP=10;VDB=0.0389723;SGB=-0.511536;RPB=0.450401;MQB=0.450401;BQB=0.900802;MQ0F=0;AF1=0.5;AC1=1;DP4=5,0,3,0;MQ=51;FQ=52.0151;PV4=1,1,0.0151486,1 GT:PL 0/1:79,0,122
Scaffold_1 288920 . G T 70.0074 PASS DP=9;VDB=0.0221621;SGB=-0.556411;RPB=0.124046;MQB=0.124046;BQB=0.62023;MQ0F=0;AF1=0.5;AC1=1;DP4=4,0,4,0;MQ=51;FQ=63.5005;PV4=1,1,1.19212e-10,1 GT:PL 0/1:100,0,91
Scaffold_1 288937 . G A 52.0072 PASS DP=8;VDB=0.0433485;SGB=-0.511536;RPB=0.607698;MQB=0.607698;MQSB=1;BQB=1.01283;MQ0F=0;AF1=0.5;AC1=1;DP4=3,1,3,0;MQ=41;FQ=54.988;PV4=1,1,1,1 GT:PL 0/1:82,0,104
Scaffold_1 288959 . C T 35.0083 PASS DP=10;VDB=0.0389723;SGB=-0.511536;RPB=0.641538;MQB=0.641538;MQSB=1;BQB=0.916482;MQ0F=0;AF1=0.5;AC1=1;DP4=6,1,3,0;MQ=41;FQ=38.0158;PV4=1,0.396145,1,1 GT:PL 0/1:65,0,129
Scaffold_1 288984 . A G 41.0074 PASS DP=10;VDB=0.0389723;SGB=-0.511536;RPB=0.274945;MQB=0.641538;MQSB=0.9375;BQB=0.916482;MQ0F=0;AF1=0.5;AC1=1;DP4=5,2,3,0;MQ=41;FQ=44.0154;PV4=1,1,1,1 GT:PL 0/1:71,0,130
Scaffold_1 289016 . C T 22.0341 PASS DP=15;VDB=0.0433485;SGB=-0.511536;RPB=0.040184;MQB=1;MQSB=0.909091;BQB=0.400803;MQ0F=0;AF1=0.499998;AC1=1;DP4=8,2,3,0;MQ=46;FQ=25.0286;PV4=1,0.020787,0.357983,0.0644221 GT:PL 0/1:52,0,194
Scaffold_1 289048 . G A 26.0177 PASS DP=15;VDB=0.745967;SGB=-0.556411;RPB=0.501405;MQB=0.146957;MQSB=0.692463;BQB=0.900862;MQ0F=0.0666667;AF1=0.499999;AC1=1;DP4=6,5,4,0;MQ=50;FQ=29.0205;PV4=0.230769,0.229625,0.0274595,0.111927 GT:PL 0/1:56,0,244
Scaffold_1 289069 . C T 26.0177 PASS DP=15;VDB=0.745967;SGB=-0.556411;RPB=0.426445;MQB=0.046111;MQSB=0.88692;BQB=0.872525;MQ0F=0;AF1=0.499999;AC1=1;DP4=6,5,4,0;MQ=52;FQ=29.0205;PV4=0.230769,1,0.000332501,0.357517 GT:PL 0/1:56,0,253
Scaffold_1 289188 . A G 211.009 PASS DP=21;VDB=0.0588422;SGB=-0.676189;RPB=0.661993;MQB=0.562066;MQSB=0.757384;BQB=0.902014;MQ0F=0;AF1=0.5;AC1=1;DP4=6,2,7,4;MQ=55;FQ=141.016;PV4=1,1,0.0908244,0.204158 GT:PL 0/1:241,0,168
Scaffold_1 289194 . A G 18.0749 PASS DP=22;VDB=0.0481132;SGB=-0.511536;RPB=0.131994;MQB=0.703588;MQSB=0.879351;BQB=0.986036;MQ0F=0;AF1=0.499996;AC1=1;DP4=12,4,0,3;MQ=57;FQ=21.0492;PV4=0.0361197,1,1,1 GT:PL 0/1:48,0,255
Scaffold_1 289207 . C T 175.009 PASS DP=25;VDB=0.835732;SGB=-0.676189;RPB=0.941369;MQB=0.580552;MQSB=0.662419;BQB=0.998323;MQ0F=0;AF1=0.5;AC1=1;DP4=5,8,9,2;MQ=57;FQ=178.017;PV4=0.04718,0.481929,0.0613009,1 GT:PL 0/1:205,0,255
Scaffold_1 289229 . C T 203.009 PASS DP=24;VDB=0.656326;SGB=-0.670168;RPB=0.89609;MQB=0.714623;MQSB=0.736479;BQB=0.993166;MQ0F=0;AF1=0.5;AC1=1;DP4=8,6,5,5;MQ=56;FQ=205.99;PV4=1,1,1,1 GT:PL 0/1:233,0,255
Scaffold_1 289254 . G A 225.009 PASS DP=23;VDB=0.94573;SGB=-0.680642;RPB=0.522986;MQB=0.653027;MQSB=0.933111;BQB=0.998108;MQ0F=0;AF1=0.5;AC1=1;DP4=7,4,6,6;MQ=57;FQ=210.932;PV4=0.680172,0.301926,1,0.416693 GT:PL 0/1:255,0,238
Scaffold_1 289264 . C T 110.008 PASS DP=19;VDB=0.102965;SGB=-0.651104;RPB=0.562066;MQB=0.661993;MQSB=0.716531;BQB=0.00183006;MQ0F=0;AF1=0.5;AC1=1;DP4=5,6,5,3;MQ=59;FQ=113.016;PV4=0.649917,2.59323e-07,0.0560115,1 GT:PL 0/1:140,0,255
Scaffold_1 289282 . C G 188.009 PASS DP=20;VDB=0.326267;SGB=-0.662043;RPB=0.740201;MQB=0.920044;MQSB=0.902014;BQB=0.920044;MQ0F=0;AF1=0.5;AC1=1;DP4=5,5,6,3;MQ=60;FQ=191.014;PV4=0.649917,0.152528,0.152528,0.420367 GT:PL 0/1:218,0,249
Scaffold_1 289295 . T G 193.009 PASS DP=18;VDB=0.242574;SGB=-0.651104;RPB=0.629416;MQB=0.91051;MQSB=0.887766;BQB=0.77073;MQ0F=0;AF1=0.5;AC1=1;DP4=5,4,5,3;MQ=59;FQ=193.007;PV4=1,1,0.151836,1 GT:PL 0/1:223,0,223
Scaffold_1 289323 . G T 172.009 PASS DP=20;VDB=0.936663;SGB=-0.651104;RPB=0.978183;MQB=0.915545;MQSB=0.892753;BQB=0.339296;MQ0F=0;AF1=0.5;AC1=1;DP4=4,4,5,3;MQ=59;FQ=175.013;PV4=1,0.247772,0.167141,0.0332985 GT:PL 0/1:202,0,232
Scaffold_1 289554 . C G 82.0076 PASS DP=20;VDB=0.865618;SGB=-0.590765;RPB=0.674676;MQB=1;MQSB=1;BQB=0.980754;MQ0F=0;AF1=0.5;AC1=1;DP4=5,8,1,4;MQ=60;FQ=85.0157;PV4=0.614846,0.307847,1,0.0176478 GT:PL 0/1:112,0,255
Scaffold_1 289558 . C T 79.0075 PASS DP=20;VDB=0.863154;SGB=-0.590765;RPB=0.674676;MQB=1;MQSB=1;BQB=0.942222;MQ0F=0;AF1=0.5;AC1=1;DP4=5,8,1,4;MQ=60;FQ=82.0157;PV4=0.614846,0.231983,1,0.0152089 GT:PL 0/1:109,0,255
Scaffold_1 289657 . C T 211.009 PASS DP=21;VDB=0.56343;SGB=-0.680642;RPB=0.864302;MQB=1;MQSB=1;BQB=0.466776;MQ0F=0;AF1=0.5;AC1=1;DP4=5,3,3,9;MQ=60;FQ=173.016;PV4=0.167468,0.0681577,1,0.124205 GT:PL 0/1:241,0,200
Scaffold_1 289954 . A G 120.008 PASS DP=11;VDB=0.357605;SGB=-0.590765;RPB=0.89338;MQB=0.162433;MQSB=0.89338;BQB=0.649731;MQ0F=0;AF1=0.5;AC1=1;DP4=2,2,3,2;MQ=55;FQ=89.014;PV4=1,1,0.0157918,1 GT:PL 0/1:150,0,116
Scaffold_1 290031 . T C 209.009 PASS DP=15;VDB=0.623847;SGB=-0.676189;RPB=0.862013;MQB=0.1098;MQSB=0.509156;BQB=0.823708;MQ0F=0;AF1=0.5;AC1=1;DP4=1,2,7,4;MQ=50;FQ=64.0155;PV4=0.538462,0.0328538,0.0395114,0.234819 GT:PL 0/1:239,0,91
Scaffold_1 290273 . A G 159.009 PASS DP=13;VDB=0.480966;SGB=-0.651104;RPB=0.996401;MQB=0.087379;MQSB=0.896474;BQB=0.697274;MQ0F=0;AF1=0.5;AC1=1;DP4=3,1,2,6;MQ=49;FQ=69.0155;PV4=0.222222,1,0.00897277,1 GT:PL 0/1:189,0,96
Scaffold_1 308800 . G A 140.032 PASS DP=8;VDB=0.62634;SGB=-0.651104;MQSB=0;MQ0F=0;AF1=1;AC1=2;DP4=0,0,6,2;MQ=54;FQ=-50.986 GT:PL 1/1:173,24,0
Scaffold_1 311086 . A G 26.0177 PASS DP=21;VDB=0.0221621;SGB=-0.511536;RPB=0.751477;MQB=1;MQSB=1;BQB=0.982301;MQ0F=0;AF1=0.499999;AC1=1;DP4=11,3,0,3;MQ=60;FQ=29.0205;PV4=0.0294118,0.37728,1,1 GT:PL 0/1:56,0,255
Scaffold_1 337944 . C G 13.2188 PASS DP=5;VDB=0.02;SGB=-0.453602;RPB=0.666667;MQB=0;BQB=0.666667;MQ0F=0;AF1=0.499987;AC1=1;DP4=3,0,2,0;MQ=51;FQ=16.1218;PV4=1,1,0.00934398,1 GT:PL 0/1:43,0,83
Scaffold_1 337964 . G A 13.2188 PASS DP=5;VDB=0.02;SGB=-0.453602;RPB=0;MQB=0;MQSB=1;BQB=0.666667;MQ0F=0;AF1=0.499987;AC1=1;DP4=2,1,2,0;MQ=51;FQ=16.1218;PV4=1,1,0.00934398,1 GT:PL 0/1:43,0,83
Scaffold_1 337973 . C T 13.2188 PASS DP=5;VDB=0.02;SGB=-0.453602;RPB=0;MQB=0;MQSB=1;BQB=0.666667;MQ0F=0;AF1=0.499987;AC1=1;DP4=2,1,2,0;MQ=51;FQ=16.1222;PV4=1,1,0.00934398,1 GT:PL 0/1:43,0,93
Scaffold_1 337974 . T A 13.2188 PASS DP=6;VDB=0.02;SGB=-0.453602;RPB=0;MQB=0;MQSB=1;BQB=0.666667;MQ0F=0;AF1=0.499987;AC1=1;DP4=2,1,2,0;MQ=51;FQ=16.1221;PV4=1,1,0.00934398,1 GT:PL 0/1:43,0,88
Scaffold_1 337978 . A G 13.2188 PASS DP=6;VDB=0.02;SGB=-0.453602;RPB=0;MQB=0;MQSB=1;BQB=1;MQ0F=0;AF1=0.499987;AC1=1;DP4=2,1,2,0;MQ=51;FQ=16.1221;PV4=1,1,0.00934398,1 GT:PL 0/1:43,0,88
Scaffold_1 348873 . T C 26.0177 PASS DP=11;VDB=0.102049;SGB=-0.590765;RPB=0.450401;MQB=0.600535;MQSB=0.868321;BQB=0.900802;MQ0F=0.272727;AF1=0.499999;AC1=1;DP4=1,2,3,2;MQ=47;FQ=29.0161;PV4=1,1,0.0734003,0.456587 GT:PL 0/1:56,0,86
Scaffold_1 349099 . A G 16.1146 PASS DP=6;VDB=0.0279572;SGB=-0.511536;RPB=0;MQB=0.333333;MQSB=1;BQB=0.666667;MQ0F=0;AF1=0.500025;AC1=1;DP4=1,1,0,3;MQ=50;FQ=11.5405;PV4=0.4,1,0.134711,1 GT:PL 0/1:46,0,39
Scaffold_1 349140 . C G 35.0083 PASS DP=6;VDB=0.0312982;SGB=-0.511536;RPB=0.861511;MQB=0.574341;MQSB=1;BQB=0.861511;MQ0F=0;AF1=0.5;AC1=1;DP4=1,2,0,3;MQ=52;FQ=38.0115;PV4=1,1,0.0779861,1 GT:PL 0/1:65,0,95
Scaffold_1 349167 . T G 25.0205 PASS DP=6;VDB=0.0349627;SGB=-0.511536;RPB=0;MQB=0.333333;MQSB=0.333333;BQB=1;MQ0F=0;AF1=0.5;AC1=1;DP4=2,0,0,3;MQ=50;FQ=25.9017;PV4=0.1,0.319069,0.134711,1 GT:PL 0/1:55,0,57
Scaffold_1 350428 . C T 20.0499 PASS DP=7;VDB=0.02;SGB=-0.453602;RPB=0;MQB=0.5;MQSB=0.28717;BQB=0.5;MQ0F=0;AF1=0.499997;AC1=1;DP4=3,1,0,2;MQ=50;FQ=23.036;PV4=0.4,0.31573,0.456009,1 GT:PL 0/1:50,0,89
Scaffold_1 350451 . C T 24.0241 PASS DP=8;VDB=0.02;SGB=-0.453602;RPB=0;MQB=0.5;MQSB=0.28717;BQB=0.75;MQ0F=0;AF1=0.499999;AC1=1;DP4=3,1,0,2;MQ=50;FQ=27.0127;PV4=0.4,1,0.456009,1 GT:PL 0/1:54,0,80
Scaffold_1 370422 . C T 225.01 PASS DP=16;VDB=0.559446;SGB=-0.680642;RPB=0.288619;MQB=0.0703402;MQSB=0.994135;BQB=0.998163;MQ0F=0.0625;AF1=0.50002;AC1=1;DP4=4,0,6,6;MQ=45;FQ=14.1838;PV4=0.233516,1,1,1 GT:PL 0/1:255,0,41
Scaffold_1 370613 . G A 12.272 PASS DP=12;VDB=0.0822145;SGB=-0.511536;RPB=0.472367;MQB=0.594025;MQSB=0.414697;BQB=0.829029;MQ0F=0.0833333;AF1=0.499984;AC1=1;DP4=3,5,0,3;MQ=39;FQ=15.1496;PV4=0.490909,1,0.216467,1 GT:PL 0/1:42,0,163
Scaffold_1 371830 . T G 88.0076 PASS DP=8;VDB=0.751039;SGB=-0.556411;RPB=0.810265;MQB=0.810265;MQSB=0.607698;BQB=0.405132;MQ0F=0;AF1=0.5;AC1=1;DP4=2,1,1,3;MQ=52;FQ=59.0127;PV4=0.485714,0.11348,1,0.182969 GT:PL 0/1:118,0,86
Scaffold_1 371835 . G A 38.0077 PASS DP=8;VDB=0.64;SGB=-0.453602;RPB=0.6;MQB=0.8;MQSB=0.607698;BQB=0.3;MQ0F=0;AF1=0.5;AC1=1;DP4=1,4,2,0;MQ=52;FQ=41.0155;PV4=0.142857,1,1,1 GT:PL 0/1:68,0,117
Scaffold_1 371847 . G A 51.0072 PASS DP=9;VDB=0.724364;SGB=-0.511536;RPB=0.450401;MQB=0.900802;MQSB=0.868321;BQB=0.300267;MQ0F=0;AF1=0.5;AC1=1;DP4=1,4,3,0;MQ=49;FQ=54.011;PV4=0.142857,1,0.445601,1 GT:PL 0/1:81,0,111
Scaffold_1 371849 . C A 51.0072 PASS DP=9;VDB=0.71601;SGB=-0.511536;RPB=0.450401;MQB=0.900802;MQSB=0.868321;BQB=0.900802;MQ0F=0;AF1=0.5;AC1=1;DP4=1,4,3,0;MQ=49;FQ=54.015;PV4=0.142857,1,0.445601,1 GT:PL 0/1:81,0,122
Scaffold_1 371881 . T G 88.0076 PASS DP=8;VDB=0.775568;SGB=-0.556411;RPB=0.607698;MQB=1.01283;MQSB=0.5;BQB=1.01283;MQ0F=0;AF1=0.5;AC1=1;DP4=3,0,2,2;MQ=46;FQ=56.014;PV4=0.428571,0.310635,0.423771,1 GT:PL 0/1:118,0,83
Scaffold_1 371896 . T C 45.0072 PASS DP=7;VDB=0.28399;SGB=-0.511536;RPB=0.202566;MQB=0.607698;MQSB=0.3;BQB=1.01283;MQ0F=0.142857;AF1=0.5;AC1=1;DP4=3,1,2,1;MQ=41;FQ=47.3764;PV4=1,0.422836,1,1 GT:PL 0/1:75,0,83
Scaffold_1 371905 . T G 49.0072 PASS DP=7;VDB=0.28399;SGB=-0.511536;RPB=0.202566;MQB=0.607698;MQSB=0.3;BQB=0.607698;MQ0F=0.142857;AF1=0.5;AC1=1;DP4=3,1,2,1;MQ=41;FQ=29.9921;PV4=1,1,1,1 GT:PL 0/1:79,0,57
Scaffold_1 371933 . C G 40.0075 PASS DP=10;VDB=0.292464;SGB=-0.511536;RPB=0.0916482;MQB=0.458241;MQSB=0.274945;BQB=0.916482;MQ0F=0.2;AF1=0.5;AC1=1;DP4=5,2,2,1;MQ=39;FQ=43.0154;PV4=1,0.419876,1,0.120565 GT:PL 0/1:70,0,138
Scaffold_1 372002 . A T 97.7687 PASS DP=10;VDB=0.230436;SGB=-0.636426;RPB=1;MQB=1;MQSB=1;BQB=1;MQ0F=0.3;AF1=1;AC1=2;DP4=1,0,6,1;MQ=31;FQ=-26.9944;PV4=1,0.429062,1,1 GT:PL 0/1:126,0,0
Scaffold_1 372034 . G A 78.9787 PASS DP=10;VDB=0.0697235;SGB=-0.616816;RPB=1;MQB=1;MQSB=1;BQB=1;MQ0F=0.3;AF1=0.667194;AC1=1;DP4=1,0,5,1;MQ=32;FQ=-24.003;PV4=1,0.376015,1,0.339113 GT:PL 0/1:108,0,3
Scaffold_1 372071 . C T 138.013 PASS DP=13;VDB=0.963262;SGB=-0.651104;RPB=1;MQB=1;MQSB=0.577865;BQB=1;MQ0F=0.153846;AF1=1;AC1=2;DP4=1,0,5,3;MQ=36;FQ=-29.9901;PV4=1,0.291489,1,0.21762 GT:PL 1/1:168,3,0
Scaffold_1 372081 . G A 112.008 PASS DP=13;VDB=0.772099;SGB=-0.651104;RPB=0.979382;MQB=0.920044;MQSB=0.208021;BQB=0.532481;MQ0F=0.153846;AF1=0.50001;AC1=1;DP4=1,2,4,4;MQ=32;FQ=17.1004;PV4=1,1,1,0.121864 GT:PL 0/1:142,0,44
Scaffold_1 373438 . C T 212.042 PASS DP=12;VDB=0.505179;SGB=-0.670168;RPB=1;MQB=1;MQSB=0.763675;BQB=1;MQ0F=0;AF1=1;AC1=2;DP4=0,1,4,6;MQ=38;FQ=-49.986;PV4=1,0.328626,1,0.28226 GT:PL 1/1:245,23,0
Scaffold_1 373440 . G T 203.085 PASS DP=12;VDB=0.159195;SGB=-0.662043;RPB=1;MQB=1;MQSB=0.895781;BQB=1;MQ0F=0;AF1=1;AC1=2;DP4=0,1,4,5;MQ=38;FQ=-46.986;PV4=1,0.486908,1,0.295725 GT:PL 1/1:236,20,0
Scaffold_1 373464 . G A 216.026 PASS DP=12;VDB=0.933481;SGB=-0.676189;RPB=1;MQB=1;MQSB=1;BQB=1;MQ0F=0;AF1=1;AC1=2;DP4=0,1,3,8;MQ=39;FQ=-51.986;PV4=1,0.263915,1,0.283676 GT:PL 1/1:249,25,0
Scaffold_1 373494 . G A 129.264 PASS DP=10;VDB=0.447761;SGB=-0.636426;RPB=1;MQB=1;MQSB=1;BQB=1;MQ0F=0;AF1=1;AC1=2;DP4=0,1,1,6;MQ=39;FQ=-41.9862;PV4=1,0.195256,1,0.303986 GT:PL 1/1:162,15,0
Scaffold_1 373538 . G A 149.168 PASS DP=9;VDB=0.195133;SGB=-0.651104;RPB=1;MQB=1;MQSB=1;BQB=1;MQ0F=0;AF1=1;AC1=2;DP4=0,1,1,7;MQ=41;FQ=-43.9861;PV4=1,0.27099,1,1 GT:PL 1/1:182,17,0
Scaffold_1 373952 . G A 97.5136 PASS DP=4;VDB=0.118267;SGB=-0.556411;MQSB=1;MQ0F=0;AF1=1;AC1=2;DP4=0,0,3,1;MQ=42;FQ=-38.9864 GT:PL 1/1:130,12,0
Scaffold_1 374412 . A G 16.1143 PASS DP=10;VDB=0.06;SGB=-0.453602;RPB=0.571429;MQB=0;MQSB=0.809011;BQB=0.571429;MQ0F=0;AF1=0.499994;AC1=1;DP4=4,3,2,0;MQ=56;FQ=19.069;PV4=0.5,1,1.32622e-07,0.319167 GT:PL 0/1:46,0,183
Scaffold_1 374420 . C A 13.2188 PASS DP=10;VDB=0.1;SGB=-0.453602;RPB=0.5;MQB=0;MQSB=0.733186;BQB=0.75;MQ0F=0;AF1=0.499987;AC1=1;DP4=5,3,2,0;MQ=57;FQ=16.1222;PV4=1,1,1.52811e-08,1 GT:PL 0/1:43,0,206
Scaffold_1 374436 . T G 10.42 PASS DP=12;VDB=0.06;SGB=-0.453602;RPB=0.888889;MQB=0;MQSB=0.763675;BQB=0.333333;MQ0F=0;AF1=0.499975;AC1=1;DP4=5,4,2,0;MQ=57;FQ=13.2265;PV4=0.490909,1,1.76845e-09,1 GT:PL 0/1:40,0,189
Scaffold_1 374440 . G A 13.2188 PASS DP=11;VDB=0.1;SGB=-0.453602;RPB=0.75;MQB=0;MQSB=0.733186;BQB=0.75;MQ0F=0;AF1=0.499987;AC1=1;DP4=5,3,2,0;MQ=57;FQ=16.1222;PV4=1,1,1.52811e-08,1 GT:PL 0/1:43,0,213
Scaffold_1 374465 . G A 16.1143 PASS DP=10;VDB=0.06;SGB=-0.453602;RPB=0.571429;MQB=0;MQSB=0.809011;BQB=0.285714;MQ0F=0;AF1=0.499994;AC1=1;DP4=4,3,2,0;MQ=56;FQ=19.069;PV4=0.5,1,1.32622e-07,1 GT:PL 0/1:46,0,175
Scaffold_1 374513 . T C 13.2188 PASS DP=10;VDB=0.06;SGB=-0.453602;RPB=0.25;MQB=0;MQSB=0.733186;BQB=0.625;MQ0F=0;AF1=0.499987;AC1=1;DP4=5,3,2,0;MQ=57;FQ=16.1222;PV4=1,1,1.52811e-08,1 GT:PL 0/1:43,0,206
Scaffold_1 374531 . G A 13.2188 PASS DP=12;VDB=0.1;SGB=-0.453602;RPB=0;MQB=0;MQSB=0.75;BQB=0.6875;MQ0F=0;AF1=0.499987;AC1=1;DP4=6,2,2,0;MQ=57;FQ=16.1222;PV4=1,0.298522,1.52811e-08,0.216036 GT:PL 0/1:43,0,223
Scaffold_1 374750 . A G 14.176 PASS DP=11;VDB=0.166456;SGB=-0.511536;RPB=0.877913;MQB=0.0497871;MQSB=0.924449;BQB=0.979382;MQ0F=0.0909091;AF1=0.49999;AC1=1;DP4=3,5,1,2;MQ=54;FQ=17.1004;PV4=1,1,0.000467691,1 GT:PL 0/1:44,0,204
Scaffold_1 374760 . A G 17.0924 PASS DP=11;VDB=0.166456;SGB=-0.511536;RPB=0.733186;MQB=0.0916482;MQSB=1.00775;BQB=0.733186;MQ0F=0.0909091;AF1=0.499995;AC1=1;DP4=3,4,1,2;MQ=53;FQ=20.058;PV4=1,1,0.00104644,1 GT:PL 0/1:47,0,194
Scaffold_1 386324 . G C 19.061 PASS DP=9;VDB=0.02;SGB=-0.453602;RPB=0.285714;MQB=0.285714;MQSB=0.162433;BQB=0.714286;MQ0F=0;AF1=0.499997;AC1=1;DP4=3,4,2,0;MQ=54;FQ=22.0421;PV4=0.444444,1,0.198158,0.102087 GT:PL 0/1:49,0,191
Scaffold_1 391609 . G A 93.0146 PASS DP=8;VDB=0.149052;SGB=-0.556411;RPB=0.810265;MQB=0.202566;MQSB=1;BQB=0.405132;MQ0F=0;AF1=0.500792;AC1=1;DP4=3,0,3,1;MQ=38;FQ=-4.1155;PV4=1,1,1,1 GT:PL 0/1:123,0,25
Scaffold_1 391694 . C A 50.0181 PASS DP=5;VDB=0.142856;SGB=-0.511536;RPB=0;MQB=0;MQSB=0.333333;BQB=0.666667;MQ0F=0;AF1=0.501256;AC1=1;DP4=2,0,1,2;MQ=49;FQ=-5.44501;PV4=0.4,0.323944,1,1 GT:PL 0/1:80,0,23
Scaffold_1 391854 . T C 34.0087 PASS DP=8;VDB=0.922998;SGB=-0.556411;RPB=0.62023;MQB=0.124046;MQSB=0.916667;BQB=0.992367;MQ0F=0.125;AF1=0.5;AC1=1;DP4=1,3,1,3;MQ=46;FQ=37.016;PV4=1,1,0.00154934,1 GT:PL 0/1:64,0,123
Scaffold_1 391858 . T A 34.0087 PASS DP=9;VDB=0.967212;SGB=-0.590765;RPB=0.406082;MQB=0.0812164;MQSB=0.785714;BQB=0.974597;MQ0F=0.111111;AF1=0.5;AC1=1;DP4=1,3,1,4;MQ=44;FQ=37.016;PV4=1,0.264942,0.000608868,1 GT:PL 0/1:64,0,116
Scaffold_1 391887 . G T 27.0155 PASS DP=5;VDB=0.185719;SGB=-0.511536;RPB=0;MQB=0;MQSB=1;BQB=0.666667;MQ0F=0;AF1=0.5;AC1=1;DP4=0,2,1,2;MQ=44;FQ=28.5657;PV4=1,0.247513,0.0293641,1 GT:PL 0/1:57,0,61
Scaffold_1 391909 . G A 21.0411 PASS DP=7;VDB=0.192436;SGB=-0.511536;RPB=1.01283;MQB=0.202566;MQSB=1;BQB=0.810265;MQ0F=0;AF1=0.499998;AC1=1;DP4=0,4,1,2;MQ=43;FQ=24.0321;PV4=0.428571,1,0.0278544,1 GT:PL 0/1:51,0,102
Scaffold_1 392004 . G A 26.5509 PASS DP=3;VDB=0.02;SGB=-0.453602;RPB=1;MQB=1;BQB=1;MQ0F=0;AF1=1;AC1=2;DP4=0,1,0,2;MQ=33;FQ=-28.9912;PV4=1,0.272814,1,1 GT:PL 1/1:56,2,0
Scaffold_1 392020 . C T 41.7648 PASS DP=2;VDB=0.02;SGB=-0.453602;MQ0F=0;AF1=1;AC1=2;DP4=0,0,0,2;MQ=40;FQ=-32.988 GT:PL 1/1:73,6,0
Scaffold_1 393112 . G A 36.4604 PASS DP=6;VDB=0.935046;SGB=-0.511536;RPB=0.666667;MQB=0.333333;MQSB=1;BQB=0.666667;MQ0F=0;AF1=0.829413;AC1=1;DP4=0,2,1,2;MQ=26;FQ=-25.9966;PV4=1,1,1,0.247513 GT:PL 0/1:65,0,1
Scaffold_1 393140 . C T 13.2192 PASS DP=7;VDB=0.14;SGB=-0.453602;RPB=0.8;MQB=0.2;MQSB=1;BQB=0.6;MQ0F=0;AF1=0.500037;AC1=1;DP4=1,4,0,2;MQ=27;FQ=9.5519;PV4=1,0.329672,1,1 GT:PL 0/1:43,0,37
Scaffold_1 393166 . T C 18.075 PASS DP=8;VDB=0.1;SGB=-0.453602;RPB=1;MQB=0.166667;MQSB=1;BQB=0.416667;MQ0F=0;AF1=0.499999;AC1=1;DP4=2,4,0,2;MQ=28;FQ=18.5371;PV4=1,1,1,1 GT:PL 0/1:48,0,49
Scaffold_1 393175 . C T 19.0879 PASS DP=6;VDB=0.1;SGB=-0.453602;RPB=0.666667;MQB=0;MQSB=1;BQB=0;MQ0F=0;AF1=0.503164;AC1=1;DP4=1,2,0,2;MQ=27;FQ=-8.63014;PV4=1,0.0199083,1,1 GT:PL 0/1:49,0,19
Scaffold_1 393205 . T C 23.0285 PASS DP=7;VDB=0.1;SGB=-0.453602;RPB=0.4;MQB=0.2;MQSB=0.8;BQB=0.2;MQ0F=0;AF1=0.499999;AC1=1;DP4=2,3,0,2;MQ=30;FQ=25.9916;PV4=1,1,1,1 GT:PL 0/1:53,0,74
Scaffold_1 393246 . T A 51.0072 PASS DP=7;VDB=0.431015;SGB=-0.511536;RPB=0.202566;MQB=0.607698;MQSB=0.810265;BQB=0.810265;MQ0F=0;AF1=0.5;AC1=1;DP4=1,3,2,1;MQ=34;FQ=44.5004;PV4=0.485714,0.315426,1,1 GT:PL 0/1:81,0,72
Scaffold_1 393258 . G A 60.2192 PASS DP=5;VDB=0.431015;SGB=-0.511536;RPB=0.166667;MQB=0;MQSB=0.666667;BQB=0.5;MQ0F=0;AF1=0.526316;AC1=1;DP4=1,1,2,1;MQ=32;FQ=-17.0717;PV4=1,1,1,1 GT:PL 0/1:90,0,10
Scaffold_1 393263 . C T 63.4203 PASS DP=5;VDB=0.431015;SGB=-0.511536;RPB=1;MQB=1;MQSB=0;BQB=1;MQ0F=0;AF1=0.555409;AC1=1;DP4=0,1,2,1;MQ=35;FQ=-20.029;PV4=1,1,1,1 GT:PL 0/1:93,0,7
Scaffold_1 394067 . G C 121.514 PASS DP=8;VDB=0.339131;SGB=-0.616816;RPB=1;MQB=1;MQSB=1;BQB=1;MQ0F=0.125;AF1=1;AC1=2;DP4=1,0,0,6;MQ=55;FQ=-38.9864;PV4=0.142857,1,1,0.360486 GT:PL 1/1:154,12,0
Scaffold_1 394073 . C T 129.264 PASS DP=8;VDB=0.252943;SGB=-0.636426;RPB=1;MQB=1;MQSB=1;BQB=1;MQ0F=0.125;AF1=1;AC1=2;DP4=1,0,0,7;MQ=55;FQ=-41.9862;PV4=0.125,0.317929,1,0.367882 GT:PL 1/1:162,15,0
Scaffold_1 394145 . C T 152.134 PASS DP=10;VDB=0.775687;SGB=-0.651104;RPB=1;MQB=1;MQSB=0.142857;BQB=1;MQ0F=0.1;AF1=1;AC1=2;DP4=1,0,1,7;MQ=51;FQ=-44.9861;PV4=0.222222,0.028601,1,1 GT:PL 1/1:185,18,0
Scaffold_1 394151 . T C 164.084 PASS DP=10;VDB=0.948694;SGB=-0.662043;RPB=1;MQB=1;MQSB=0.375;BQB=1;MQ0F=0;AF1=1;AC1=2;DP4=0,1,2,7;MQ=48;FQ=-46.986;PV4=1,0.290651,1,0.270338 GT:PL 1/1:197,20,0
Scaffold_1 394176 . T A 106.973 PASS DP=7;VDB=0.850373;SGB=-0.590765;RPB=1;MQB=1;MQSB=0.5;BQB=1;MQ0F=0;AF1=1;AC1=2;DP4=0,1,2,3;MQ=42;FQ=-35.9869;PV4=1,0.352,1,0.352 GT:PL 1/1:139,9,0
Scaffold_1 394179 . G T 98.042 PASS DP=7;VDB=0.850373;SGB=-0.590765;RPB=0.8;MQB=0.2;MQSB=0.6;BQB=0.6;MQ0F=0;AF1=0.503994;AC1=1;DP4=0,2,2,3;MQ=42;FQ=-9.50208;PV4=1,1,1,0.248673 GT:PL 0/1:128,0,18
Scaffold_1 394191 . A C 112.514 PASS DP=7;VDB=0.789228;SGB=-0.616816;RPB=1;MQB=1;MQSB=0.810265;BQB=1;MQ0F=0;AF1=1;AC1=2;DP4=0,1,3,3;MQ=39;FQ=-38.9864;PV4=1,0.201246,1,0.292851 GT:PL 1/1:145,12,0
Scaffold_1 394222 . T C 162.331 PASS DP=8;VDB=0.86172;SGB=-0.636426;RPB=1;MQB=1;MQSB=0.992367;BQB=1;MQ0F=0;AF1=1;AC1=2;DP4=0,1,4,3;MQ=36;FQ=-40.9862;PV4=1,0.367882,1,0.246363 GT:PL 1/1:195,14,0
Scaffold_1 394240 . T C 103.973 PASS DP=7;VDB=0.400625;SGB=-0.590765;RPB=1;MQB=1;MQSB=0.5;BQB=1;MQ0F=0;AF1=1;AC1=2;DP4=0,1,4,1;MQ=34;FQ=-35.9869;PV4=0.333333,0.352,1,1 GT:PL 1/1:136,9,0
Scaffold_1 394250 . C T 97.9728 PASS DP=7;VDB=0.41821;SGB=-0.590765;RPB=1;MQB=1;MQSB=0.5;BQB=1;MQ0F=0;AF1=1;AC1=2;DP4=0,1,4,1;MQ=34;FQ=-35.9869;PV4=0.333333,0.270735,1,1 GT:PL 1/1:130,9,0
Scaffold_1 394252 . A C 103.973 PASS DP=6;VDB=0.409395;SGB=-0.590765;RPB=1;MQB=1;MQSB=0.5;BQB=1;MQ0F=0;AF1=1;AC1=2;DP4=0,1,4,1;MQ=34;FQ=-35.9869;PV4=0.333333,0.352,1,1 GT:PL 1/1:136,9,0
Scaffold_1 394348 . C T 28.0172 PASS DP=3;VDB=0.1;SGB=-0.453602;RPB=1;MQB=1;MQSB=1;BQB=1;MQ0F=0;AF1=0.500396;AC1=1;DP4=1,0,1,1;MQ=39;FQ=3.54481;PV4=1,0.333333,1,0.152539 GT:PL 0/1:58,0,28
Scaffold_1 394353 . C T 23.0319 PASS DP=3;VDB=0.1;SGB=-0.453602;RPB=1;MQB=1;MQSB=1;BQB=1;MQ0F=0;AF1=0.500395;AC1=1;DP4=1,0,1,1;MQ=39;FQ=3.53958;PV4=1,0.333333,1,0.106148 GT:PL 0/1:53,0,28
Scaffold_1 394376 . C T 25.7758 PASS DP=2;VDB=0.66;SGB=-0.453602;MQ0F=0;AF1=1;AC1=2;DP4=0,0,2,0;MQ=32;FQ=-32.988 GT:PL 1/1:57,6,0
Scaffold_1 394414 . C T 25.7758 PASS DP=3;VDB=0.66;SGB=-0.453602;MQ0F=0;AF1=1;AC1=2;DP4=0,0,2,0;MQ=32;FQ=-32.988 GT:PL 1/1:57,6,0
Scaffold_1 394427 . T C 25.7758 PASS DP=3;VDB=0.64;SGB=-0.453602;MQ0F=0;AF1=1;AC1=2;DP4=0,0,2,0;MQ=32;FQ=-32.988 GT:PL 1/1:57,6,0
Scaffold_1 394438 . G A 31.9747 PASS DP=5;VDB=0.827271;SGB=-0.511536;MQ0F=0;AF1=1;AC1=2;DP4=0,0,3,0;MQ=27;FQ=-35.9869 GT:PL 1/1:64,9,0
Scaffold_1 394444 . G A 15.6608 PASS DP=5;VDB=0.82085;SGB=-0.511536;RPB=1;MQB=1;MQSB=1;BQB=1;MQ0F=0;AF1=1;AC1=2;DP4=0,1,3,0;MQ=23;FQ=-28.9913;PV4=0.25,0.0648059,1,0.211325 GT:PL 1/1:45,2,0
Scaffold_1 394537 . G C 69.0505 PASS DP=6;VDB=0.62656;SGB=-0.511536;RPB=0.28717;MQB=0.28717;MQSB=0;BQB=0.861511;MQ0F=0;AF1=0.505038;AC1=1;DP4=3,0,1,2;MQ=43;FQ=-10.4007;PV4=0.4,1,1,0.136055 GT:PL 0/1:99,0,17
Scaffold_1 394648 . G A 19.061 PASS DP=14;VDB=0.529687;SGB=-0.511536;RPB=0.738577;MQB=0.927041;MQSB=0.852144;BQB=0.782349;MQ0F=0;AF1=0.499997;AC1=1;DP4=7,4,3,0;MQ=38;FQ=22.0421;PV4=0.505495,0.0580622,1,0.450944 GT:PL 0/1:49,0,203
Scaffold_1 394728 . A G 10.42 PASS DP=20;VDB=0.303109;SGB=-0.556411;RPB=0.758573;MQB=0.601139;MQSB=0.863325;BQB=0.331124;MQ0F=0.15;AF1=0.499975;AC1=1;DP4=10,4,3,1;MQ=23;FQ=13.2265;PV4=1,1,1,1 GT:PL 0/1:40,0,118
Scaffold_1 394841 . C T 51.0072 PASS DP=11;VDB=0.368038;SGB=-0.616816;RPB=0.895781;MQB=0.111973;MQSB=0.183296;BQB=0.895781;MQ0F=0;AF1=0.5;AC1=1;DP4=2,2,5,1;MQ=32;FQ=53.961;PV4=0.5,1,0.00174242,0.223407 GT:PL 0/1:81,0,100
Scaffold_1 394876 . A G 73.0074 PASS DP=23;VDB=0.440419;SGB=-0.590765;RPB=0.311374;MQB=0.27354;MQSB=0.997221;BQB=0.118756;MQ0F=0.0434783;AF1=0.5;AC1=1;DP4=11,5,3,2;MQ=33;FQ=76.0156;PV4=1,1,1,1 GT:PL 0/1:103,0,220
Scaffold_1 394902 . G A 21.0411 PASS DP=23;VDB=0.397076;SGB=-0.556411;RPB=0.960618;MQB=0.931063;MQSB=0.988166;BQB=0.470262;MQ0F=0.0434783;AF1=0.499998;AC1=1;DP4=11,5,1,3;MQ=34;FQ=24.0321;PV4=0.255315,0.0170073,1,1 GT:PL 0/1:51,0,249
Scaffold_1 394913 . C T 41.0074 PASS DP=24;VDB=0.0815962;SGB=-0.590765;RPB=0.535261;MQB=0.535261;MQSB=0.998018;BQB=0.999306;MQ0F=0.166667;AF1=0.5;AC1=1;DP4=9,9,5,0;MQ=32;FQ=44.0154;PV4=0.115665,0.418302,1,1 GT:PL 0/1:71,0,229
Scaffold_1 394927 . T A 31.0104 PASS DP=26;VDB=0.102049;SGB=-0.590765;RPB=0.245061;MQB=0.997226;MQSB=0.820031;BQB=0.956529;MQ0F=0.153846;AF1=0.5;AC1=1;DP4=10,8,4,1;MQ=34;FQ=34.0168;PV4=0.610568,1,1,1 GT:PL 0/1:61,0,249
Scaffold_1 394933 . G A 44.0073 PASS DP=29;VDB=0.28128;SGB=-0.616816;RPB=0.526122;MQB=0.800737;MQSB=0.984127;BQB=0.980199;MQ0F=0.137931;AF1=0.5;AC1=1;DP4=10,8,5,1;MQ=32;FQ=47.0153;PV4=0.350947,0.127454,1,0.0929334 GT:PL 0/1:74,0,241
Scaffold_1 394974 . A G 16.1143 PASS DP=32;VDB=0.328499;SGB=-0.590765;RPB=0.999423;MQB=0.990812;MQSB=0.586241;BQB=0.574404;MQ0F=0.1875;AF1=0.499994;AC1=1;DP4=9,11,3,2;MQ=30;FQ=19.069;PV4=0.64472,1,0.480094,1 GT:PL 0/1:46,0,216
Scaffold_1 394977 . C T 42.0073 PASS DP=31;VDB=0.163984;SGB=-0.662043;RPB=0.0257322;MQB=0.541982;MQSB=0.337405;BQB=0.246925;MQ0F=0.193548;AF1=0.5;AC1=1;DP4=7,12,8,1;MQ=30;FQ=45.0154;PV4=0.015735,0.0540708,1,0.000383932 GT:PL 0/1:72,0,196
Scaffold_1 395040 . T C 18.0749 PASS DP=20;VDB=0.484771;SGB=-0.556411;RPB=0.935966;MQB=0.800574;MQSB=0.663189;BQB=0.0923331;MQ0F=0.2;AF1=0.499996;AC1=1;DP4=4,8,1,3;MQ=24;FQ=21.0486;PV4=1,1,1,0.384418 GT:PL 0/1:48,0,87
Scaffold_1 395054 . C G 55.0072 PASS DP=20;VDB=0.658104;SGB=-0.556411;RPB=0.728186;MQB=0.0388472;MQSB=0.885629;BQB=0.868509;MQ0F=0.15;AF1=0.5;AC1=1;DP4=4,10,1,3;MQ=27;FQ=58.0152;PV4=1,1,1,0.370771 GT:PL 0/1:85,0,128
Scaffold_1 395064 . G C 37.0079 PASS DP=19;VDB=0.658104;SGB=-0.556411;RPB=0.728186;MQB=0.0388472;MQSB=0.885629;BQB=0.697047;MQ0F=0.105263;AF1=0.5;AC1=1;DP4=4,10,1,3;MQ=27;FQ=40.0156;PV4=1,0.116983,1,1 GT:PL 0/1:67,0,128
Scaffold_1 395125 . C G 12.272 PASS DP=20;VDB=0.337235;SGB=-0.556411;RPB=0.493254;MQB=0.793923;MQSB=0.94394;BQB=0.310905;MQ0F=0;AF1=0.499984;AC1=1;DP4=4,9,0,4;MQ=34;FQ=15.1496;PV4=0.519328,0.103172,1,0.0339414 GT:PL 0/1:42,0,188
Scaffold_1 395146 . C T 22.0341 PASS DP=21;VDB=0.765925;SGB=-0.556411;RPB=0.843173;MQB=0.913725;MQSB=0.957217;BQB=0.816272;MQ0F=0;AF1=0.499998;AC1=1;DP4=3,11,2,2;MQ=33;FQ=25.0286;PV4=0.53268,0.313322,1,0.423568 GT:PL 0/1:52,0,186
Scaffold_1 395153 . G A 26.0177 PASS DP=22;VDB=0.348933;SGB=-0.556411;RPB=0.937845;MQB=0.844127;MQSB=0.992359;BQB=0.991017;MQ0F=0;AF1=0.499999;AC1=1;DP4=5,12,0,4;MQ=34;FQ=29.0205;PV4=0.532164,1,1,1 GT:PL 0/1:56,0,223
Scaffold_1 395186 . C T 33.0091 PASS DP=21;VDB=0.337235;SGB=-0.556411;RPB=0.955997;MQB=0.782705;MQSB=0.878409;BQB=0.969233;MQ0F=0;AF1=0.5;AC1=1;DP4=5,10,0,4;MQ=33;FQ=36.0162;PV4=0.530444,1,1,1 GT:PL 0/1:63,0,216
Scaffold_1 395210 . G A 38.0077 PASS DP=23;VDB=0.844031;SGB=-0.616816;RPB=0.99915;MQB=0.418638;MQSB=0.978966;BQB=0.537999;MQ0F=0.0869565;AF1=0.5;AC1=1;DP4=4,10,2,4;MQ=32;FQ=41.0155;PV4=1,0.367598,0.123757,1 GT:PL 0/1:68,0,197
Scaffold_1 395260 . C T 14.176 PASS DP=17;VDB=0.131948;SGB=-0.511536;RPB=0.441869;MQB=0.149163;MQSB=0.930476;BQB=0.169694;MQ0F=0.117647;AF1=0.49999;AC1=1;DP4=5,8,1,2;MQ=27;FQ=17.1004;PV4=1,0.0505863,1,0.191488 GT:PL 0/1:44,0,131
Scaffold_1 395394 . T A 21.0681 PASS DP=12;VDB=0.44936;SGB=-0.590765;RPB=0.761877;MQB=0.333321;MQSB=0.375;BQB=0.952347;MQ0F=0.0833333;AF1=0.503165;AC1=1;DP4=3,2,5,0;MQ=18;FQ=-8.62875;PV4=0.444444,0.409984,1,1 GT:PL 0/1:51,0,19
Scaffold_1 395421 . A G 19.2281 PASS DP=12;VDB=0.444909;SGB=-0.636426;RPB=0.924449;MQB=0.361741;MQSB=0.263597;BQB=0.924449;MQ0F=0.0833333;AF1=0.520676;AC1=1;DP4=2,2,6,1;MQ=17;FQ=-16.0943;PV4=0.490909,1,1,1 GT:PL 0/1:49,0,11
Scaffold_1 395745 . A G 86.0618 PASS DP=9;VDB=0.968032;SGB=-0.590765;RPB=0.450401;MQB=0.150134;BQB=0.900802;MQ0F=0.111111;AF1=0.50636;AC1=1;DP4=0,3,0,5;MQ=32;FQ=-11.3185;PV4=1,1,1,1 GT:PL 0/1:116,0,16
Scaffold_1 395806 . G A 62.0346 PASS DP=9;VDB=0.145389;SGB=-0.556411;RPB=0.868321;MQB=0.124046;MQSB=1;BQB=0.868321;MQ0F=0.222222;AF1=0.503167;AC1=1;DP4=1,3,0,4;MQ=27;FQ=-8.62639;PV4=1,1,1,1 GT:PL 0/1:92,0,19
Scaffold_1 395855 . A G 16.1564 PASS DP=4;VDB=0.38;SGB=-0.453602;RPB=1;MQB=0.5;BQB=1;MQ0F=0.25;AF1=0.505032;AC1=1;DP4=0,2,0,2;MQ=26;FQ=-10.4057;PV4=1,1,1,0.211325 GT:PL 0/1:46,0,17
Scaffold_1 397225 . T C 10.4278 PASS DP=9;VDB=0.0098501;SGB=-0.636426;RPB=0.571429;MQB=0.357143;MQSB=0.89338;BQB=0.571429;MQ0F=0;AF1=0.500972;AC1=1;DP4=1,1,3,4;MQ=19;FQ=-4.82665;PV4=1,1,0.0986913,0.273661 GT:PL 0/1:40,0,24
Scaffold_1 397229 . C T 10.4278 PASS DP=9;VDB=0.00947686;SGB=-0.636426;RPB=0.571429;MQB=0.357143;MQSB=0.89338;BQB=0.714286;MQ0F=0;AF1=0.500972;AC1=1;DP4=1,1,3,4;MQ=19;FQ=-4.82665;PV4=1,0.228051,0.0986913,0.391749 GT:PL 0/1:40,0,24
Scaffold_1 398738 . G A 61.1928 PASS DP=6;VDB=0.124686;SGB=-0.556411;RPB=1;MQB=1;BQB=1;MQ0F=0.5;AF1=1;AC1=2;DP4=1,0,4,0;MQ=31;FQ=-34.9872;PV4=1,0.247513,1,0.342519 GT:PL 1/1:93,8,0
Scaffold_1 398797 . C T 32.011 PASS DP=4;VDB=0.36;SGB=-0.453602;RPB=0;MQB=0.5;BQB=1;MQ0F=0.25;AF1=0.500158;AC1=1;DP4=2,0,2,0;MQ=35;FQ=6.20122;PV4=1,1,1,0.211325 GT:PL 0/1:62,0,32
Scaffold_1 398800 . C T 32.011 PASS DP=4;VDB=0.36;SGB=-0.453602;RPB=0.5;MQB=0.5;BQB=1;MQ0F=0.25;AF1=0.500158;AC1=1;DP4=2,0,2,0;MQ=35;FQ=6.20122;PV4=1,1,1,0.211325 GT:PL 0/1:62,0,32
Scaffold_1 398897 . T C 12.7494 PASS DP=4;VDB=0.0162466;SGB=-0.556411;MQSB=0.5;MQ0F=0.75;AF1=1;AC1=2;DP4=0,0,2,2;MQ=20;FQ=-38.9865 GT:PL 1/1:45,12,0
Scaffold_1 398925 . C T 34.0087 PASS DP=14;VDB=0.01126;SGB=-0.556411;RPB=0.968069;MQB=0.793923;MQSB=0.793923;BQB=0.94394;MQ0F=0.285714;AF1=0.5;AC1=1;DP4=5,3,3,1;MQ=29;FQ=37.016;PV4=1,0.311787,1,0.412705 GT:PL 0/1:64,0,121
Scaffold_1 398960 . T C 21.0411 PASS DP=15;VDB=0.0132829;SGB=-0.556411;RPB=0.18452;MQB=0.852144;MQSB=0.965069;BQB=0.527292;MQ0F=0.333333;AF1=0.499998;AC1=1;DP4=6,4,3,1;MQ=27;FQ=24.0321;PV4=1,1,1,1 GT:PL 0/1:51,0,115
Scaffold_1 398994 . G A 47.0072 PASS DP=18;VDB=0.00429937;SGB=-0.590765;RPB=0.700784;MQB=0.263231;MQSB=0.79079;BQB=0.419767;MQ0F=0.444444;AF1=0.5;AC1=1;DP4=9,3,3,2;MQ=24;FQ=49.3764;PV4=0.600032,1,1,1 GT:PL 0/1:77,0,85
Scaffold_1 400012 . G A 21.0582 PASS DP=6;VDB=0.0846253;SGB=-0.556411;RPB=0.25;MQB=1;BQB=0.75;MQ0F=0;AF1=0.501992;AC1=1;DP4=2,0,4,0;MQ=23;FQ=-6.96508;PV4=1,0.270735,0.459149,0.270735 GT:PL 0/1:51,0,21
Scaffold_1 400090 . T C 33.1999 PASS DP=6;VDB=0.0980762;SGB=-0.590765;RPB=1;MQB=1;BQB=1;MQ0F=0;AF1=0.730437;AC1=1;DP4=1,0,5,0;MQ=23;FQ=-24.9994;PV4=1,0.352,1,0.352 GT:PL 0/1:62,0,2
Scaffold_1 400111 . T C 42.5131 PASS DP=4;VDB=0.0751808;SGB=-0.556411;MQ0F=0;AF1=1;AC1=2;DP4=0,0,4,0;MQ=26;FQ=-38.9864 GT:PL 1/1:75,12,0
Scaffold_1 400120 . A T 25.7758 PASS DP=3;VDB=0.38;SGB=-0.453602;MQ0F=0;AF1=1;AC1=2;DP4=0,0,2,0;MQ=32;FQ=-32.988 GT:PL 1/1:57,6,0
Scaffold_1 400124 . G A 25.7758 PASS DP=3;VDB=0.38;SGB=-0.453602;MQ0F=0;AF1=1;AC1=2;DP4=0,0,2,0;MQ=32;FQ=-32.988 GT:PL 1/1:57,6,0
Scaffold_1 400226 . G A 24.0268 PASS DP=7;VDB=0.0860477;SGB=-0.511536;RPB=0.607698;MQB=0.405132;MQSB=1;BQB=0.607698;MQ0F=0.142857;AF1=0.500314;AC1=1;DP4=1,3,0,3;MQ=23;FQ=4.12505;PV4=1,1,1,0.365182 GT:PL 0/1:54,0,29
Scaffold_1 400320 . A G 17.0967 PASS DP=6;VDB=0.036923;SGB=-0.511536;RPB=0.861511;MQB=0.861511;BQB=0.28717;MQ0F=0;AF1=0.500494;AC1=1;DP4=0,3,0,3;MQ=23;FQ=-3.02465;PV4=1,1,1,1 GT:PL 0/1:47,0,27
Scaffold_1 400331 . A G 21.0582 PASS DP=6;VDB=0.709006;SGB=-0.556411;RPB=0;MQB=0.75;BQB=0.625;MQ0F=0;AF1=0.501992;AC1=1;DP4=0,2,0,4;MQ=23;FQ=-6.96508;PV4=1,1,0.461195,1 GT:PL 0/1:51,0,21
Scaffold_1 405475 . G C 12.2733 PASS DP=9;VDB=0.02;SGB=-0.453602;RPB=0;MQB=0;MQSB=0.0812164;BQB=0.142857;MQ0F=0.333333;AF1=0.500142;AC1=1;DP4=2,5,2,0;MQ=22;FQ=5.89344;PV4=0.166667,0.00922576,1,1 GT:PL 0/1:42,0,32
Scaffold_1 405512 . A G 23.1968 PASS DP=7;VDB=0.0949329;SGB=-0.556411;RPB=0.405132;MQB=0.405132;MQSB=0.202566;BQB=1.01283;MQ0F=0.142857;AF1=0.520678;AC1=1;DP4=1,2,2,2;MQ=25;FQ=-16.0939;PV4=1,1,1,1 GT:PL 0/1:53,0,11
Scaffold_1 405559 . C T 11.3884 PASS DP=5;VDB=0.02;SGB=-0.453602;RPB=1;MQB=1;BQB=1;MQ0F=0;AF1=0.50634;AC1=1;DP4=1,0,2,0;MQ=36;FQ=-11.3312;PV4=1,0.333333,1,1 GT:PL 0/1:41,0,16
Scaffold_1 405600 . G A 14.2175 PASS DP=4;VDB=0.02;SGB=-0.453602;RPB=0;MQB=0;BQB=0.5;MQ0F=0.25;AF1=0.505028;AC1=1;DP4=0,2,0,2;MQ=36;FQ=-10.4086;PV4=1,0.351881,1,1 GT:PL 0/1:44,0,17
Scaffold_1 405603 . A G 33.0522 PASS DP=4;VDB=0.02;SGB=-0.453602;RPB=0;MQB=0;BQB=0.5;MQ0F=0.25;AF1=0.505038;AC1=1;DP4=0,2,0,2;MQ=36;FQ=-10.4008;PV4=1,1,1,1 GT:PL 0/1:63,0,17
Scaffold_1 405628 . G C 26.0607 PASS DP=4;VDB=0.02;SGB=-0.453602;RPB=0;MQB=0;BQB=0.5;MQ0F=0.25;AF1=0.505038;AC1=1;DP4=0,2,0,2;MQ=36;FQ=-10.4012;PV4=1,0.211325,1,1 GT:PL 0/1:56,0,17
Scaffold_1 406645 . T C 65.0142 PASS DP=11;VDB=0.339131;SGB=-0.616816;RPB=0.559863;MQB=0.559863;MQSB=1;BQB=0.727822;MQ0F=0.181818;AF1=0.500792;AC1=1;DP4=3,1,6,0;MQ=27;FQ=-4.11551;PV4=0.4,0.175968,1,1 GT:PL 0/1:95,0,25
Scaffold_1 406690 . T C 64.0073 PASS DP=8;VDB=0.308689;SGB=-0.556411;RPB=0.202566;MQB=0.810265;BQB=0.810265;MQ0F=0;AF1=0.5;AC1=1;DP4=3,0,4,0;MQ=41;FQ=49.9295;PV4=1,0.23948,1,1 GT:PL 0/1:94,0,77
Scaffold_1 406694 . C T 11.3381 PASS DP=9;VDB=0.82;SGB=-0.453602;RPB=0.857143;MQB=0.428571;BQB=0.428571;MQ0F=0;AF1=0.49998;AC1=1;DP4=7,0,2,0;MQ=40;FQ=14.1838;PV4=1,1,0.0396488,1 GT:PL 0/1:41,0,138
Scaffold_1 406733 . C G 92.0077 PASS DP=14;VDB=0.138089;SGB=-0.616816;RPB=0.813189;MQB=0.931779;MQSB=1;BQB=0.304946;MQ0F=0.0714286;AF1=0.5;AC1=1;DP4=5,1,6,0;MQ=38;FQ=90.2514;PV4=1,1,1,1 GT:PL 0/1:122,0,119
Scaffold_1 406734 . C T 29.0123 PASS DP=14;VDB=0.360777;SGB=-0.556411;RPB=0.997503;MQB=0.977751;MQSB=0;BQB=0.852144;MQ0F=0.0714286;AF1=0.5;AC1=1;DP4=8,2,4,0;MQ=37;FQ=32.0178;PV4=1,0.29708,1,1 GT:PL 0/1:59,0,158
Scaffold_1 406778 . G A 72.0074 PASS DP=21;VDB=0.419382;SGB=-0.636426;RPB=0.239651;MQB=0.748798;MQSB=0.0556283;BQB=0.991996;MQ0F=0.0952381;AF1=0.5;AC1=1;DP4=10,2,6,1;MQ=38;FQ=75.0155;PV4=1,0.365344,1,0.201147 GT:PL 0/1:102,0,151
Scaffold_1 406781 . C T 26.0177 PASS DP=21;VDB=0.480825;SGB=-0.590765;RPB=0.984877;MQB=0.891154;MQSB=0.015787;BQB=0.925758;MQ0F=0.0952381;AF1=0.499999;AC1=1;DP4=12,3,3,2;MQ=36;FQ=29.0205;PV4=0.559791,0.164455,0.278754,1 GT:PL 0/1:56,0,181
Scaffold_1 406807 . A G 74.0075 PASS DP=25;VDB=0.737297;SGB=-0.662043;RPB=0.740489;MQB=0.92764;MQSB=0.00346442;BQB=0.508648;MQ0F=0.08;AF1=0.5;AC1=1;DP4=11,4,6,3;MQ=35;FQ=77.0156;PV4=1,1,0.315787,0.113562 GT:PL 0/1:104,0,174
Scaffold_1 406831 . A G 140.008 PASS DP=29;VDB=0.630032;SGB=-0.662043;RPB=0.589135;MQB=0.0196653;MQSB=0.60635;BQB=0.558035;MQ0F=0.103448;AF1=0.5;AC1=1;DP4=10,8,5,4;MQ=38;FQ=140.477;PV4=1,1,1,0.204207 GT:PL 0/1:170,0,171
Scaffold_1 406855 . C T 29.0123 PASS DP=29;VDB=0.132938;SGB=-0.636426;RPB=0.651983;MQB=0.233622;MQSB=0.864302;BQB=0.886283;MQ0F=0.103448;AF1=0.5;AC1=1;DP4=8,11,4,3;MQ=40;FQ=32.0178;PV4=0.665217,0.447984,0.057128,0.236332 GT:PL 0/1:59,0,255
Scaffold_1 406880 . G A 67.0074 PASS DP=29;VDB=0.139238;SGB=-0.636426;RPB=0.858077;MQB=0.937378;MQSB=1;BQB=0.998471;MQ0F=0.0689655;AF1=0.5;AC1=1;DP4=12,8,1,6;MQ=41;FQ=70.0155;PV4=0.0768116,0.332151,1,1 GT:PL 0/1:97,0,255
Scaffold_1 406904 . C T 34.0087 PASS DP=27;VDB=0.0974253;SGB=-0.616816;RPB=0.594025;MQB=0.61171;MQSB=0.942086;BQB=0.345444;MQ0F=0.037037;AF1=0.5;AC1=1;DP4=11,10,0,6;MQ=45;FQ=37.016;PV4=0.053586,1,0.226849,1 GT:PL 0/1:64,0,255
Scaffold_1 406924 . C T 148.008 PASS DP=27;VDB=0.338575;SGB=-0.680642;RPB=0.300727;MQB=0.00130633;MQSB=0.325778;BQB=0.652128;MQ0F=0;AF1=0.5;AC1=1;DP4=7,6,3,9;MQ=48;FQ=151.017;PV4=0.226195,0.0981398,0.000228838,0.434443 GT:PL 0/1:178,0,255
Scaffold_1 406975 . G A 122.008 PASS DP=21;VDB=0.974124;SGB=-0.662043;RPB=0.930391;MQB=0.0744668;MQSB=0.982124;BQB=0.477679;MQ0F=0.047619;AF1=0.5;AC1=1;DP4=6,5,3,6;MQ=47;FQ=125.016;PV4=0.405859,0.0347545,0.0328693,0.35598 GT:PL 0/1:152,0,238
Scaffold_1 407026 . G A 52.0072 PASS DP=19;VDB=0.206846;SGB=-0.590765;RPB=0.66939;MQB=0.510573;MQSB=0.943335;BQB=0.951229;MQ0F=0.0526316;AF1=0.5;AC1=1;DP4=6,6,1,4;MQ=46;FQ=55.0154;PV4=0.338235,1,0.177891,1 GT:PL 0/1:82,0,217
Scaffold_1 407039 . C T 20.0499 PASS DP=17;VDB=0.102722;SGB=-0.511536;RPB=0.992095;MQB=0.452191;MQSB=0.922371;BQB=0.751477;MQ0F=0.0588235;AF1=0.499997;AC1=1;DP4=5,9,1,2;MQ=46;FQ=23.0366;PV4=1,1,0.27986,1 GT:PL 0/1:50,0,236
Scaffold_1 407121 . T A 85.0076 PASS DP=13;VDB=0.3669;SGB=-0.651104;RPB=0.989343;MQB=0.591555;MQSB=0.181818;BQB=0.306895;MQ0F=0;AF1=0.5;AC1=1;DP4=0,5,2,6;MQ=42;FQ=60.0085;PV4=0.487179,1,0.298251,0.133034 GT:PL 0/1:115,0,87
Scaffold_1 407126 . T C 26.0177 PASS DP=13;VDB=0.645206;SGB=-0.511536;RPB=0.795669;MQB=1;MQSB=0.181818;BQB=0.968368;MQ0F=0;AF1=0.499999;AC1=1;DP4=1,9,1,2;MQ=42;FQ=29.0205;PV4=0.423077,1,0.400454,0.269041 GT:PL 0/1:56,0,175
Scaffold_1 407145 . T A 62.0073 PASS DP=14;VDB=0.0190094;SGB=-0.556411;RPB=0.898397;MQB=1;MQSB=1;BQB=0.466776;MQ0F=0.0714286;AF1=0.5;AC1=1;DP4=1,8,0,4;MQ=41;FQ=65.0155;PV4=1,1,1,1 GT:PL 0/1:92,0,154
Scaffold_1 407188 . T A 81.0075 PASS DP=17;VDB=0.712859;SGB=-0.616816;RPB=0.723806;MQB=0.573029;MQSB=1;BQB=0.752698;MQ0F=0.117647;AF1=0.5;AC1=1;DP4=1,10,0,6;MQ=34;FQ=84.002;PV4=1,1,1,1 GT:PL 0/1:111,0,136
Scaffold_1 407194 . C T 169.999 PASS DP=16;VDB=0.58783;SGB=-0.689466;MQSB=1;MQ0F=0.125;AF1=1;AC1=2;DP4=0,0,1,15;MQ=33;FQ=-74.9863 GT:PL 1/1:203,48,0
Scaffold_1 407200 . C T 84.0076 PASS DP=16;VDB=0.712859;SGB=-0.616816;RPB=0.64118;MQB=0.465043;MQSB=1;BQB=0.972604;MQ0F=0.125;AF1=0.5;AC1=1;DP4=1,8,0,6;MQ=34;FQ=86.908;PV4=1,1,1,0.0432434 GT:PL 0/1:114,0,130
Scaffold_1 407209 . C T 65.0073 PASS DP=16;VDB=0.794767;SGB=-0.590765;RPB=0.79702;MQB=0.508203;MQSB=1;BQB=0.472367;MQ0F=0.125;AF1=0.5;AC1=1;DP4=1,9,0,5;MQ=32;FQ=68.0138;PV4=1,1,1,0.0579518 GT:PL 0/1:95,0,129
Scaffold_1 407269 . C T 17.0924 PASS DP=9;VDB=0.28;SGB=-0.453602;RPB=0.571429;MQB=0.142857;BQB=0.857143;MQ0F=0.222222;AF1=0.499995;AC1=1;DP4=0,7,0,2;MQ=26;FQ=19.8901;PV4=1,1,1,0.364128 GT:PL 0/1:47,0,61
Scaffold_1 407655 . C G 11.3382 PASS DP=6;VDB=0.38;SGB=-0.453602;RPB=0.25;MQB=0.625;MQSB=1;BQB=0.625;MQ0F=0;AF1=0.499982;AC1=1;DP4=4,0,1,1;MQ=27;FQ=13.865;PV4=0.333333,0.128478,1,0.101425 GT:PL 0/1:41,0,52
Scaffold_1 407749 . T G 30.0112 PASS DP=12;VDB=0.690245;SGB=-0.511536;RPB=0.472367;MQB=1;MQSB=0.222222;BQB=0.263597;MQ0F=0;AF1=0.5;AC1=1;DP4=7,1,2,1;MQ=35;FQ=33.0172;PV4=0.490909,1,1,0.483196 GT:PL 0/1:60,0,125
Scaffold_1 407781 . T C 60.0073 PASS DP=14;VDB=0.669454;SGB=-0.590765;RPB=0.506703;MQB=0.331306;MQSB=0.2;BQB=0.331306;MQ0F=0;AF1=0.5;AC1=1;DP4=5,2,5,0;MQ=38;FQ=63.0141;PV4=0.469697,0.060271,1,0.281304 GT:PL 0/1:90,0,125
Scaffold_1 407849 . C T 42.0073 PASS DP=13;VDB=0.244943;SGB=-0.556411;RPB=0.125315;MQB=0.203896;MQSB=0.935451;BQB=0.236382;MQ0F=0;AF1=0.5;AC1=1;DP4=4,4,1,3;MQ=47;FQ=45.0154;PV4=0.575758,1,0.0662377,0.312145 GT:PL 0/1:72,0,171
Scaffold_1 408492 . G A 52.0289 PASS DP=5;VDB=0.980333;SGB=-0.511536;RPB=1;MQB=1;BQB=1;MQ0F=0;AF1=0.502513;AC1=1;DP4=1,0,3,0;MQ=39;FQ=-7.77799;PV4=1,1,0.448286,0.274518 GT:PL 0/1:82,0,20
Scaffold_1 408550 . G A 68.0128 PASS DP=5;VDB=0.0550934;SGB=-0.556411;RPB=1;MQB=1;MQSB=0.666667;BQB=1;MQ0F=0;AF1=0.500629;AC1=1;DP4=0,1,2,2;MQ=41;FQ=-3.53091;PV4=1,0.26169,0.0724774,1 GT:PL 0/1:98,0,26
Scaffold_1 408568 . G A 41.0074 PASS DP=6;VDB=0.0649539;SGB=-0.511536;RPB=0;MQB=0;MQSB=1;BQB=0.333333;MQ0F=0;AF1=0.5;AC1=1;DP4=0,2,1,2;MQ=45;FQ=33.603;PV4=1,0.172823,0.0198731,1 GT:PL 0/1:71,0,61
Scaffold_1 408578 . G A 36.0081 PASS DP=6;VDB=0.0649539;SGB=-0.511536;RPB=0;MQB=0;MQSB=1;BQB=0.666667;MQ0F=0;AF1=0.5;AC1=1;DP4=0,2,1,2;MQ=45;FQ=32.824;PV4=1,0.247513,0.0198731,1 GT:PL 0/1:66,0,61
Scaffold_1 408621 . C G 126.008 PASS DP=9;VDB=0.561811;SGB=-0.590765;RPB=0.150134;MQB=0.150134;MQSB=0.62023;BQB=0.750668;MQ0F=0;AF1=0.500001;AC1=1;DP4=1,2,3,2;MQ=51;FQ=26.0258;PV4=1,1,1,1 GT:PL 0/1:156,0,53
Scaffold_1 408833 . G A 153.03 PASS DP=7;VDB=0.503448;SGB=-0.616816;RPB=1;MQB=1;MQSB=1.01283;BQB=1;MQ0F=0;AF1=0.502513;AC1=1;DP4=0,1,3,3;MQ=60;FQ=-7.77799;PV4=1,0.360486,1,1 GT:PL 0/1:183,0,20
Scaffold_1 409121 . T C 61.0107 PASS DP=6;VDB=0.235765;SGB=-0.511536;RPB=1;MQB=1;BQB=1;MQ0F=0;AF1=0.500397;AC1=1;DP4=1,0,3,0;MQ=46;FQ=3.54723;PV4=1,1,1,1 GT:PL 0/1:91,0,28
Scaffold_1 431198 . C T 134.264 PASS DP=5;VDB=0.237122;SGB=-0.590765;MQSB=1;MQ0F=0;AF1=1;AC1=2;DP4=0,0,2,3;MQ=60;FQ=-41.9862 GT:PL 1/1:167,15,0
Scaffold_1 441746 . G C 135.133 PASS DP=6;VDB=0.951477;SGB=-0.616816;MQSB=1;MQ0F=0;AF1=1;AC1=2;DP4=0,0,5,1;MQ=52;FQ=-44.9861 GT:PL 1/1:168,18,0
Scaffold_1 441761 . A C 135.264 PASS DP=5;VDB=0.378928;SGB=-0.590765;MQSB=0.5;MQ0F=0;AF1=1;AC1=2;DP4=0,0,3,2;MQ=41;FQ=-41.9862 GT:PL 1/1:168,15,0
Scaffold_1 441803 . A G 200.016 PASS DP=10;VDB=0.233032;SGB=-0.662043;MQSB=0.5;MQ0F=0;AF1=1;AC1=2;DP4=0,0,7,2;MQ=41;FQ=-53.9861 GT:PL 1/1:233,27,0
Scaffold_1 441807 . T A 222.008 PASS DP=10;VDB=0.147491;SGB=-0.670168;MQSB=0.733186;MQ0F=0;AF1=1;AC1=2;DP4=0,0,7,3;MQ=41;FQ=-56.9861 GT:PL 1/1:255,30,0
Scaffold_1 441813 . A C 222.003 PASS DP=11;VDB=0.154969;SGB=-0.676189;MQSB=0.920044;MQ0F=0;AF1=1;AC1=2;DP4=0,0,8,3;MQ=43;FQ=-59.9861 GT:PL 1/1:255,33,0
Scaffold_1 441823 . C T 204.016 PASS DP=11;VDB=0.319249;SGB=-0.662043;MQSB=0.924584;MQ0F=0;AF1=1;AC1=2;DP4=0,0,6,3;MQ=43;FQ=-53.9861 GT:PL 1/1:237,27,0
Scaffold_1 441841 . A T 222.003 PASS DP=11;VDB=0.0583733;SGB=-0.676189;MQSB=0.877913;MQ0F=0;AF1=1;AC1=2;DP4=0,0,8,3;MQ=44;FQ=-59.9861 GT:PL 1/1:255,33,0
Scaffold_1 453661 . G T 19.061 PASS DP=10;VDB=0.02;SGB=-0.453602;RPB=0.285714;MQB=1;MQSB=0.924584;BQB=0.857143;MQ0F=0;AF1=0.499997;AC1=1;DP4=4,3,2,0;MQ=60;FQ=22.0421;PV4=0.5,1,1,0.172475 GT:PL 0/1:49,0,199
Scaffold_1 460651 . C G 15.1417 PASS DP=9;VDB=0.14;SGB=-0.453602;RPB=1;MQB=0;MQSB=0.666667;BQB=0.833333;MQ0F=0;AF1=0.499992;AC1=1;DP4=2,4,0,2;MQ=56;FQ=18.0829;PV4=1,1,0,1 GT:PL 0/1:45,0,157
Scaffold_1 460656 . A C 11.3381 PASS DP=9;VDB=0.14;SGB=-0.453602;RPB=0.666667;MQB=0;MQSB=0.750668;BQB=0.833333;MQ0F=0;AF1=0.49998;AC1=1;DP4=3,3,0,2;MQ=56;FQ=14.1838;PV4=0.464286,0.478182,0,1 GT:PL 0/1:41,0,156
Scaffold_1 462117 . C G 11.3381 PASS DP=11;VDB=0.58;SGB=-0.453602;RPB=0.5;MQB=0;MQSB=0.824834;BQB=0.625;MQ0F=0;AF1=0.49998;AC1=1;DP4=3,5,0,2;MQ=56;FQ=14.1838;PV4=1,1,1.50057e-09,1 GT:PL 0/1:41,0,199
Scaffold_1 462138 . T A 14.176 PASS DP=10;VDB=0.56;SGB=-0.453602;RPB=0.857143;MQB=0;MQSB=0.714286;BQB=0.285714;MQ0F=0;AF1=0.49999;AC1=1;DP4=2,5,0,2;MQ=56;FQ=17.1004;PV4=1,1,1.74131e-08,1 GT:PL 0/1:44,0,162
Scaffold_1 462150 . G A 14.176 PASS DP=11;VDB=0.52;SGB=-0.453602;RPB=0.714286;MQB=0.285714;MQSB=1;BQB=0.571429;MQ0F=0;AF1=0.49999;AC1=1;DP4=1,6,0,2;MQ=52;FQ=17.1004;PV4=1,1,0.182481,1 GT:PL 0/1:44,0,145
Scaffold_1 464875 . T C 18.0749 PASS DP=10;VDB=0.72;SGB=-0.453602;RPB=0.714286;MQB=0;MQSB=0.974597;BQB=1;MQ0F=0;AF1=0.499996;AC1=1;DP4=3,4,1,1;MQ=57;FQ=21.0492;PV4=1,1,5.43268e-12,0.160465 GT:PL 0/1:48,0,196
Scaffold_1 466333 . C G 24.0241 PASS DP=7;VDB=0.0941127;SGB=-0.511536;RPB=0.607698;MQB=0.202566;MQSB=0.4;BQB=0.810265;MQ0F=0.142857;AF1=0.499999;AC1=1;DP4=2,2,3,0;MQ=50;FQ=27.0236;PV4=0.428571,0.251671,0.0121275,0.260526 GT:PL 0/1:54,0,126
Scaffold_1 466341 . T C 19.061 PASS DP=9;VDB=0.0900131;SGB=-0.511536;RPB=0.924584;MQB=0.115573;MQSB=0.462292;BQB=0.809011;MQ0F=0.111111;AF1=0.499997;AC1=1;DP4=3,3,3,0;MQ=52;FQ=22.0421;PV4=0.464286,1,0.00235268,1 GT:PL 0/1:49,0,161
Scaffold_1 466362 . G T 10.42 PASS DP=11;VDB=0.0860477;SGB=-0.511536;RPB=0.829029;MQB=0.0497871;MQSB=0.562708;BQB=0.360295;MQ0F=0.0909091;AF1=0.499975;AC1=1;DP4=4,4,3,0;MQ=54;FQ=13.2265;PV4=0.236364,0.0237547,0.000467691,1 GT:PL 0/1:40,0,219
Scaffold_1 466398 . T G 28.0137 PASS DP=15;VDB=0.440559;SGB=-0.556411;RPB=0.94394;MQB=0.0249144;MQSB=0.397295;BQB=0.444281;MQ0F=0.0666667;AF1=0.5;AC1=1;DP4=4,4,4,0;MQ=52;FQ=31.0185;PV4=0.208081,0.0814555,9.6309e-05,0.0834448 GT:PL 0/1:58,0,212
Scaffold_1 466731 . A C 12.272 PASS DP=6;VDB=0.18;SGB=-0.453602;RPB=0;MQB=0;BQB=0.5;MQ0F=0;AF1=0.499984;AC1=1;DP4=0,4,0,2;MQ=54;FQ=15.1496;PV4=1,0.0889039,9.87481e-06,0.0889039 GT:PL 0/1:42,0,110
Scaffold_1 466760 . T A 16.1143 PASS DP=7;VDB=0.18;SGB=-0.453602;RPB=0;MQB=0;BQB=0.875;MQ0F=0;AF1=0.499994;AC1=1;DP4=0,4,0,2;MQ=54;FQ=19.069;PV4=1,0.391057,9.87481e-06,1 GT:PL 0/1:46,0,102
Scaffold_1 466814 . C T 18.0749 PASS DP=7;VDB=0.26;SGB=-0.453602;RPB=0;MQB=0;MQSB=0.6;BQB=1;MQ0F=0;AF1=0.499996;AC1=1;DP4=2,3,0,2;MQ=55;FQ=21.0492;PV4=1,1,6.41375e-07,1 GT:PL 0/1:48,0,145
Scaffold_1 466821 . A G 18.0749 PASS DP=8;VDB=0.26;SGB=-0.453602;RPB=0;MQB=0;MQSB=0.750668;BQB=0.833333;MQ0F=0;AF1=0.499996;AC1=1;DP4=3,3,0,2;MQ=55;FQ=21.0492;PV4=0.464286,1,4.19931e-08,1 GT:PL 0/1:48,0,181
Scaffold_1 466848 . C T 144.063 PASS DP=9;VDB=0.329692;SGB=-0.616816;RPB=1;MQB=1;MQSB=0.8;BQB=1;MQ0F=0;AF1=0.50636;AC1=1;DP4=0,1,2,4;MQ=57;FQ=-11.3185;PV4=1,0.234078,1,1 GT:PL 0/1:174,0,16
Scaffold_1 468779 . A T 17.8363 PASS DP=3;VDB=0.14;SGB=-0.453602;MQ0F=0;AF1=1;AC1=2;DP4=0,0,0,2;MQ=54;FQ=-32.988 GT:PL 1/1:49,6,0
Scaffold_1 468783 . T C 35.9731 PASS DP=3;VDB=0.0481132;SGB=-0.511536;MQ0F=0;AF1=1;AC1=2;DP4=0,0,0,3;MQ=50;FQ=-35.9869 GT:PL 1/1:68,9,0
Scaffold_1 479163 . C T 19.061 PASS DP=9;VDB=0.02;SGB=-0.453602;RPB=0.571429;MQB=1;MQSB=0.974597;BQB=0.571429;MQ0F=0;AF1=0.499997;AC1=1;DP4=4,3,0,2;MQ=60;FQ=22.0421;PV4=0.444444,1,1,1 GT:PL 0/1:49,0,189
Scaffold_1 487892 . C A 16.1143 PASS DP=10;VDB=0.02;SGB=-0.453602;RPB=0;MQB=1;MQSB=0.974597;BQB=0.714286;MQ0F=0;AF1=0.499994;AC1=1;DP4=4,3,0,2;MQ=60;FQ=19.069;PV4=0.444444,1,1,1 GT:PL 0/1:46,0,196
Scaffold_1 489119 . G T 16.1143 PASS DP=10;VDB=0.02;SGB=-0.453602;RPB=0.25;MQB=1;MQSB=1.00775;BQB=0.75;MQ0F=0;AF1=0.499994;AC1=1;DP4=4,4,2,0;MQ=60;FQ=19.069;PV4=0.466667,1,1,0.0133459 GT:PL 0/1:46,0,213
Scaffold_1 499200 . T C 22.0341 PASS DP=9;VDB=0.02;SGB=-0.453602;RPB=0.333333;MQB=1;MQSB=1;BQB=0.833333;MQ0F=0;AF1=0.499998;AC1=1;DP4=1,5,0,2;MQ=60;FQ=25.0286;PV4=1,1,1,0.333587 GT:PL 0/1:52,0,161
Scaffold_1 502227 . G T 25.0205 PASS DP=9;VDB=0.02;SGB=-0.453602;RPB=0.8;MQB=1;MQSB=1;BQB=0.4;MQ0F=0;AF1=0.499999;AC1=1;DP4=4,1,2,0;MQ=60;FQ=28.0219;PV4=1,1,1,1 GT:PL 0/1:55,0,130
Scaffold_1 531850 . C T 25.0205 PASS DP=12;VDB=0.0349627;SGB=-0.511536;RPB=0.829029;MQB=0.360295;MQSB=0.742931;BQB=1;MQ0F=0.0833333;AF1=0.499999;AC1=1;DP4=2,6,3,0;MQ=47;FQ=28.0219;PV4=0.0606061,1,0.130019,1 GT:PL 0/1:55,0,175
Scaffold_1 531874 . C T 35.0083 PASS DP=17;VDB=0.176409;SGB=-0.556411;RPB=0.955084;MQB=0.261826;MQSB=0.994135;BQB=0.935966;MQ0F=0.0588235;AF1=0.5;AC1=1;DP4=3,9,3,1;MQ=46;FQ=38.0158;PV4=0.118132,0.35337,0.0772522,1 GT:PL 0/1:65,0,210
Scaffold_1 531885 . G A 46.0072 PASS DP=18;VDB=0.087413;SGB=-0.616816;RPB=0.779947;MQB=0.0659329;MQSB=0.924401;BQB=0.910176;MQ0F=0.0555556;AF1=0.5;AC1=1;DP4=3,7,2,4;MQ=45;FQ=49.0153;PV4=1,0.330238,0.00272387,1 GT:PL 0/1:76,0,209
Scaffold_1 531887 . T C 27.0155 PASS DP=18;VDB=0.16458;SGB=-0.590765;RPB=0.925212;MQB=0.0952341;MQSB=0.982609;BQB=0.266422;MQ0F=0.0555556;AF1=0.499999;AC1=1;DP4=3,10,3,2;MQ=46;FQ=30.0194;PV4=0.268207,0.0518294,0.016024,1 GT:PL 0/1:57,0,231
Scaffold_1 532205 . T C 11.3381 PASS DP=14;VDB=0.14;SGB=-0.453602;RPB=0.444444;MQB=0.222222;MQSB=0.924449;BQB=0.333333;MQ0F=0;AF1=0.49998;AC1=1;DP4=7,2,0,2;MQ=49;FQ=14.1838;PV4=0.109091,1,0.249486,1 GT:PL 0/1:41,0,164
Scaffold_1 532241 . T C 17.0924 PASS DP=14;VDB=0.364077;SGB=-0.511536;RPB=0.599223;MQB=0.150478;MQSB=0.966012;BQB=0.2628;MQ0F=0;AF1=0.499995;AC1=1;DP4=7,4,0,3;MQ=49;FQ=20.058;PV4=0.192308,1,0.0519575,1 GT:PL 0/1:47,0,213
Scaffold_1 532266 . G T 25.0205 PASS DP=11;VDB=0.37344;SGB=-0.511536;RPB=0.979382;MQB=0.0497871;MQSB=0.361741;BQB=0.655816;MQ0F=0;AF1=0.499999;AC1=1;DP4=4,4,0,3;MQ=53;FQ=28.0219;PV4=0.236364,1,0.000145842,1 GT:PL 0/1:55,0,204
Scaffold_1 544525 . G C 23.0285 PASS DP=30;VDB=0.118204;SGB=-0.616816;RPB=0.237392;MQB=0.0354678;MQSB=0.949729;BQB=0.825582;MQ0F=0.3;AF1=0.499999;AC1=1;DP4=13,10,6,0;MQ=20;FQ=25.9403;PV4=0.0676393,0.0840709,1,1 GT:PL 0/1:53,0,70
Scaffold_1 544587 . G A 33.0091 PASS DP=26;VDB=0.0161322;SGB=-0.590765;RPB=0.143593;MQB=0.0502488;MQSB=0.982042;BQB=0.846427;MQ0F=0.307692;AF1=0.5;AC1=1;DP4=7,13,5,0;MQ=24;FQ=36.0162;PV4=0.0149068,1,1,1 GT:PL 0/1:63,0,122
Scaffold_1 544795 . A G 52.0141 PASS DP=20;VDB=0.191063;SGB=-0.590765;RPB=0.33659;MQB=0.0407622;MQSB=0.2;BQB=0.573753;MQ0F=0.4;AF1=0.500792;AC1=1;DP4=2,10,0,5;MQ=21;FQ=-4.11551;PV4=1,1,1,1 GT:PL 0/1:82,0,25
Scaffold_1 544837 . T C 46.1764 PASS DP=11;VDB=0.308315;SGB=-0.590765;RPB=0.950952;MQB=0.297172;BQB=0.356607;MQ0F=0.272727;AF1=0.520679;AC1=1;DP4=0,6,0,5;MQ=22;FQ=-16.0937;PV4=1,1,1,1 GT:PL 0/1:76,0,11
Scaffold_1 545517 . A C 108.522 PASS DP=11;VDB=0.0697235;SGB=-0.616816;RPB=0.115573;MQB=0.346719;MQSB=0.487298;BQB=0.462292;MQ0F=0;AF1=0.571816;AC1=1;DP4=2,1,3,3;MQ=31;FQ=-21.0201;PV4=1,1,1,0.258245 GT:PL 0/1:138,0,6
Scaffold_1 545559 . G A 61.0073 PASS DP=14;VDB=0.807392;SGB=-0.590765;RPB=0.194886;MQB=0.194886;MQSB=0.95494;BQB=0.584657;MQ0F=0;AF1=0.5;AC1=1;DP4=5,2,2,3;MQ=27;FQ=30.0176;PV4=0.558081,0.127159,1,0.406668 GT:PL 0/1:91,0,57
Scaffold_1 545893 . C G 185.178 PASS DP=15;VDB=0.0275968;SGB=-0.676189;RPB=0.0368832;MQB=0.334895;MQSB=0.240074;BQB=0.374629;MQ0F=0;AF1=0.520679;AC1=1;DP4=0,3,7,4;MQ=33;FQ=-16.0937;PV4=0.192308,1,1,1 GT:PL 0/1:215,0,11
Scaffold_1 545894 . T A 190.34 PASS DP=15;VDB=0.0436431;SGB=-0.680642;RPB=0.0342181;MQB=0.283536;MQSB=0.128634;BQB=0.556584;MQ0F=0;AF1=0.543032;AC1=1;DP4=0,3,8,4;MQ=33;FQ=-19.0401;PV4=0.0769231,1,1,1 GT:PL 0/1:220,0,8
Scaffold_1 545913 . G A 215.001 PASS DP=12;VDB=0.0400322;SGB=-0.680642;MQSB=0.352725;MQ0F=0;AF1=1;AC1=2;DP4=0,0,8,4;MQ=35;FQ=-62.9862 GT:PL 1/1:248,36,0
Scaffold_1 545990 . C T 16.1143 PASS DP=12;VDB=0.22;SGB=-0.453602;RPB=0.75;MQB=0.8125;MQSB=0.625;BQB=0.375;MQ0F=0;AF1=0.499994;AC1=1;DP4=7,1,1,1;MQ=38;FQ=19.069;PV4=0.377778,1,1,1 GT:PL 0/1:46,0,154
Scaffold_1 545991 . A C 19.061 PASS DP=12;VDB=0.18;SGB=-0.453602;RPB=0.857143;MQB=0.857143;MQSB=0.642857;BQB=0.571429;MQ0F=0;AF1=0.499997;AC1=1;DP4=6,1,1,1;MQ=38;FQ=22.0421;PV4=0.416667,1,1,1 GT:PL 0/1:49,0,142
Scaffold_1 545992 . C A 16.1143 PASS DP=12;VDB=0.18;SGB=-0.453602;RPB=0.75;MQB=0.8125;MQSB=0.625;BQB=0.5;MQ0F=0;AF1=0.499994;AC1=1;DP4=7,1,1,1;MQ=38;FQ=19.069;PV4=0.377778,1,1,1 GT:PL 0/1:46,0,154
Scaffold_1 545994 . A C 19.061 PASS DP=11;VDB=0.18;SGB=-0.453602;RPB=1;MQB=0.75;MQSB=0.583333;BQB=0.833333;MQ0F=0;AF1=0.499997;AC1=1;DP4=5,1,1,1;MQ=38;FQ=22.0421;PV4=0.464286,0.362302,1,1 GT:PL 0/1:49,0,145
Scaffold_1 545995 . T A 16.1143 PASS DP=11;VDB=0.18;SGB=-0.453602;RPB=0.75;MQB=0.875;MQSB=0.625;BQB=0.5;MQ0F=0;AF1=0.499994;AC1=1;DP4=7,1,1,1;MQ=37;FQ=19.069;PV4=0.377778,1,1,1 GT:PL 0/1:46,0,154
Scaffold_1 545996 . C T 16.1143 PASS DP=11;VDB=0.18;SGB=-0.453602;RPB=0.75;MQB=0.875;MQSB=0.625;BQB=0.5;MQ0F=0;AF1=0.499994;AC1=1;DP4=7,1,1,1;MQ=37;FQ=19.069;PV4=0.377778,1,1,1 GT:PL 0/1:46,0,160
Scaffold_1 545997 . A C 19.061 PASS DP=11;VDB=0.18;SGB=-0.453602;RPB=0.857143;MQB=0.714286;MQSB=0.571429;BQB=0.571429;MQ0F=0;AF1=0.499997;AC1=1;DP4=6,1,1,1;MQ=38;FQ=22.0421;PV4=0.416667,1,1,1 GT:PL 0/1:49,0,141
Scaffold_1 545998 . T A 22.0341 PASS DP=11;VDB=0.18;SGB=-0.453602;RPB=0.666667;MQB=0.75;MQSB=0.583333;BQB=0.666667;MQ0F=0;AF1=0.499998;AC1=1;DP4=5,1,1,1;MQ=38;FQ=25.0286;PV4=0.464286,1,1,1 GT:PL 0/1:52,0,142
Scaffold_1 545999 . A T 25.0205 PASS DP=11;VDB=0.18;SGB=-0.453602;RPB=0.8;MQB=0.8;MQSB=0.6;BQB=0.8;MQ0F=0;AF1=0.499999;AC1=1;DP4=4,1,1,1;MQ=38;FQ=28.0219;PV4=1,1,1,1 GT:PL 0/1:55,0,123
Scaffold_1 546000 . C A 13.2188 PASS DP=11;VDB=0.18;SGB=-0.453602;RPB=0.75;MQB=0.6875;MQSB=0.5625;BQB=0.8125;MQ0F=0;AF1=0.499987;AC1=1;DP4=7,1,1,1;MQ=38;FQ=16.1222;PV4=0.377778,1,0.474206,1 GT:PL 0/1:43,0,148
Scaffold_1 546001 . T C 16.1143 PASS DP=11;VDB=0.18;SGB=-0.453602;RPB=0.75;MQB=0.6875;MQSB=0.5625;BQB=0.375;MQ0F=0;AF1=0.499994;AC1=1;DP4=7,1,1,1;MQ=38;FQ=19.069;PV4=0.377778,1,0.474206,1 GT:PL 0/1:46,0,146
Scaffold_1 546002 . G T 22.0341 PASS DP=11;VDB=0.18;SGB=-0.453602;RPB=0.666667;MQB=0.75;MQSB=0.583333;BQB=0.666667;MQ0F=0;AF1=0.499998;AC1=1;DP4=5,1,1,1;MQ=38;FQ=25.0286;PV4=0.464286,1,1,1 GT:PL 0/1:52,0,134
Scaffold_1 546003 . A G 19.061 PASS DP=11;VDB=0.18;SGB=-0.453602;RPB=0.857143;MQB=0.714286;MQSB=0.571429;BQB=0.571429;MQ0F=0;AF1=0.499997;AC1=1;DP4=6,1,1,1;MQ=38;FQ=22.0421;PV4=0.416667,1,1,1 GT:PL 0/1:49,0,145
Scaffold_1 546004 . C A 16.1143 PASS DP=11;VDB=0.18;SGB=-0.453602;RPB=0.75;MQB=0.875;MQSB=0.625;BQB=0.5;MQ0F=0;AF1=0.499994;AC1=1;DP4=7,1,1,1;MQ=37;FQ=19.069;PV4=0.377778,1,1,1 GT:PL 0/1:46,0,158
Scaffold_1 546007 . A C 44.7647 PASS DP=3;VDB=0.18;SGB=-0.453602;MQSB=1;MQ0F=0;AF1=1;AC1=2;DP4=0,0,1,1;MQ=38;FQ=-32.988 GT:PL 1/1:76,6,0
Scaffold_1 546068 . T C 11.3381 PASS DP=14;VDB=0.0117389;SGB=-0.556411;RPB=0.852144;MQB=0.18452;MQSB=0.583333;BQB=0.960789;MQ0F=0.0714286;AF1=0.49998;AC1=1;DP4=8,2,4,0;MQ=43;FQ=14.1838;PV4=1,1,0.00695224,1 GT:PL 0/1:41,0,201
Scaffold_1 546069 . G A 15.1417 PASS DP=13;VDB=0.0117389;SGB=-0.556411;RPB=1;MQB=0.174611;MQSB=1;BQB=0.878264;MQ0F=0.0769231;AF1=0.499992;AC1=1;DP4=7,1,4,0;MQ=44;FQ=18.0829;PV4=1,1,0.0101203,1 GT:PL 0/1:45,0,165
Scaffold_1 546072 . T G 13.2188 PASS DP=13;VDB=0.0117389;SGB=-0.556411;RPB=0.953497;MQB=0.180092;MQSB=1;BQB=0.953497;MQ0F=0.0769231;AF1=0.499987;AC1=1;DP4=8,1,4,0;MQ=43;FQ=16.1222;PV4=1,1,0.00841132,1 GT:PL 0/1:43,0,175
Scaffold_1 546088 . A G 13.2188 PASS DP=14;VDB=0.0117389;SGB=-0.556411;RPB=0.852144;MQB=0.0773047;MQSB=0.833333;BQB=0.527292;MQ0F=0.0714286;AF1=0.499987;AC1=1;DP4=8,2,4,0;MQ=46;FQ=16.1222;PV4=1,1,0.00285556,1 GT:PL 0/1:43,0,201
Scaffold_1 546100 . C G 138.008 PASS DP=12;VDB=0.116635;SGB=-0.636426;RPB=0.200967;MQB=0.0401934;MQSB=1;BQB=0.924449;MQ0F=0.0833333;AF1=0.500003;AC1=1;DP4=4,0,6,1;MQ=49;FQ=23.0366;PV4=1,0.239498,1,0.152255 GT:PL 0/1:168,0,50
Scaffold_1 546151 . A C 225.016 PASS DP=18;VDB=0.913403;SGB=-0.683931;RPB=0.105848;MQB=0.00590723;MQSB=0.868509;BQB=0.839542;MQ0F=0.0555556;AF1=0.500792;AC1=1;DP4=5,0,9,4;MQ=50;FQ=-4.1155;PV4=0.277778,1,1,1 GT:PL 0/1:255,0,25
Scaffold_1 546337 . T C 21.0411 PASS DP=27;VDB=0.0230738;SGB=-0.590765;RPB=0.974407;MQB=0.660463;MQSB=0.115917;BQB=0.858207;MQ0F=0.0740741;AF1=0.499998;AC1=1;DP4=12,9,3,2;MQ=39;FQ=24.0321;PV4=1,1,0.258703,1 GT:PL 0/1:51,0,255
Scaffold_1 546438 . C T 216.009 PASS DP=43;VDB=0.402539;SGB=-0.692831;RPB=0.710273;MQB=0.0674167;MQSB=0.00919152;BQB=0.773988;MQ0F=0.162791;AF1=0.500002;AC1=1;DP4=12,1,10,14;MQ=27;FQ=24.0321;PV4=0.00425187,0.126064,1,0.445171 GT:PL 0/1:246,0,51
Scaffold_1 546636 . G A 11.3381 PASS DP=14;VDB=0.698947;SGB=-0.511536;RPB=0.699673;MQB=0.944459;MQSB=0.863636;BQB=0.879351;MQ0F=0.142857;AF1=0.49998;AC1=1;DP4=2,8,0,3;MQ=42;FQ=14.1838;PV4=1,1,0.374624,1 GT:PL 0/1:41,0,154
Scaffold_1 546645 . A G 21.0411 PASS DP=12;VDB=0.570714;SGB=-0.590765;RPB=0.838008;MQB=0.331306;MQSB=0.85;BQB=0.896474;MQ0F=0.166667;AF1=0.499998;AC1=1;DP4=1,6,1,4;MQ=42;FQ=24.0321;PV4=1,1,0.038045,1 GT:PL 0/1:51,0,145
Scaffold_1 546649 . G A 14.176 PASS DP=12;VDB=0.690245;SGB=-0.511536;RPB=0.485672;MQB=0.962269;MQSB=0.85;BQB=0.983051;MQ0F=0.166667;AF1=0.49999;AC1=1;DP4=2,7,0,3;MQ=42;FQ=17.1004;PV4=1,1,0.39183,0.0407767 GT:PL 0/1:44,0,137
Scaffold_1 546655 . G A 14.176 PASS DP=12;VDB=0.690245;SGB=-0.511536;RPB=0.485672;MQB=0.962269;MQSB=0.85;BQB=1;MQ0F=0.166667;AF1=0.49999;AC1=1;DP4=2,7,0,3;MQ=42;FQ=17.1004;PV4=1,1,0.39183,0.0407767 GT:PL 0/1:44,0,146
Scaffold_1 546812 . C T 15.1417 PASS DP=16;VDB=0.0516381;SGB=-0.556411;RPB=0.971017;MQB=0.732962;MQSB=1;BQB=0.983592;MQ0F=0.125;AF1=0.499992;AC1=1;DP4=1,11,0,4;MQ=25;FQ=18.0829;PV4=1,1,1,0.395981 GT:PL 0/1:45,0,116
Scaffold_1 546973 . C T 82.0348 PASS DP=10;VDB=0.530999;SGB=-0.616816;RPB=0.333333;MQB=0.333333;MQSB=0.333333;BQB=0.833333;MQ0F=0.1;AF1=0.503167;AC1=1;DP4=0,2,6,0;MQ=41;FQ=-8.62639;PV4=0.0357143,1,1,0.162889 GT:PL 0/1:112,0,19
Scaffold_1 556838 . G T 25.0205 PASS DP=8;VDB=0.02;SGB=-0.453602;RPB=0.4;MQB=1;MQSB=1;BQB=0.6;MQ0F=0;AF1=0.499999;AC1=1;DP4=3,2,2,0;MQ=60;FQ=28.0219;PV4=1,1,1,1 GT:PL 0/1:55,0,152
Scaffold_1 568119 . A G 25.026 PASS DP=9;VDB=0.768087;SGB=-0.590765;RPB=0.487298;MQB=0.89338;MQSB=0.115573;BQB=0.487298;MQ0F=0.666667;AF1=0.500628;AC1=1;DP4=1,3,2,3;MQ=23;FQ=-3.53395;PV4=1,1,1,1 GT:PL 0/1:55,0,26
Scaffold_1 573776 . G A 12.272 PASS DP=10;VDB=0.64;SGB=-0.453602;RPB=0.625;MQB=0;MQSB=0.523791;BQB=0.5625;MQ0F=0;AF1=0.499984;AC1=1;DP4=3,5,2,0;MQ=57;FQ=15.1496;PV4=0.444444,1,1.94104e-11,1 GT:PL 0/1:42,0,169
Scaffold_1 574061 . C A 19.061 PASS DP=15;VDB=0.409395;SGB=-0.556411;RPB=0.558035;MQB=0.0211283;MQSB=0.466776;BQB=0.742584;MQ0F=0;AF1=0.499997;AC1=1;DP4=4,5,0,4;MQ=53;FQ=22.0421;PV4=0.227972,0.246564,0.000542237,1 GT:PL 0/1:49,0,252
Scaffold_1 574063 . C A 16.1143 PASS DP=15;VDB=0.409395;SGB=-0.556411;RPB=0.361741;MQB=0.0401934;MQSB=0.361741;BQB=0.643095;MQ0F=0;AF1=0.499994;AC1=1;DP4=4,3,0,4;MQ=52;FQ=19.069;PV4=0.193939,0.103881,0.00209124,1 GT:PL 0/1:46,0,233
Scaffold_1 574075 . A G 13.2188 PASS DP=14;VDB=0.428037;SGB=-0.556411;RPB=0.697274;MQB=0.0249144;MQSB=0.540433;BQB=0.913799;MQ0F=0;AF1=0.499987;AC1=1;DP4=3,5,0,4;MQ=53;FQ=16.1222;PV4=0.490909,0.241166,0.00106264,1 GT:PL 0/1:43,0,221
Scaffold_1 576314 . G A 80.013 PASS DP=5;VDB=0.541814;SGB=-0.556411;RPB=1;MQB=1;MQSB=1;BQB=1;MQ0F=0;AF1=0.500629;AC1=1;DP4=1,0,0,4;MQ=45;FQ=-3.53091;PV4=0.2,1,1,0.342519 GT:PL 0/1:110,0,26
Scaffold_1 576320 . C T 46.0141 PASS DP=5;VDB=0.199299;SGB=-0.511536;RPB=1;MQB=1;MQSB=1;BQB=1;MQ0F=0;AF1=0.500792;AC1=1;DP4=1,0,0,3;MQ=40;FQ=-4.11553;PV4=0.25,0.435417,0,1 GT:PL 0/1:76,0,25
Scaffold_1 576371 . T G 67.9724 PASS DP=3;VDB=0.185719;SGB=-0.511536;MQ0F=0;AF1=1;AC1=2;DP4=0,0,0,3;MQ=40;FQ=-35.9869 GT:PL 1/1:100,9,0
Scaffold_1 576391 . C T 38.7651 PASS DP=3;VDB=0.42;SGB=-0.453602;MQ0F=0;AF1=1;AC1=2;DP4=0,0,0,2;MQ=40;FQ=-32.988 GT:PL 1/1:70,6,0
Scaffold_1 576674 . C T 43.009 PASS DP=3;VDB=0.32;SGB=-0.453602;RPB=1;MQB=1;MQSB=1;BQB=1;MQ0F=0;AF1=0.500199;AC1=1;DP4=0,1,1,1;MQ=46;FQ=5.46576;PV4=1,1,1,1 GT:PL 0/1:73,0,31
Scaffold_1 577993 . C T 39.9725 PASS DP=4;VDB=0.251321;SGB=-0.511536;MQ0F=0;AF1=1;AC1=2;DP4=0,0,3,0;MQ=45;FQ=-35.9869 GT:PL 1/1:72,9,0
Scaffold_1 578238 . A G 33.9737 PASS DP=3;VDB=0.814281;SGB=-0.511536;MQ0F=0;AF1=1;AC1=2;DP4=0,0,0,3;MQ=33;FQ=-35.9869 GT:PL 1/1:66,9,0
Scaffold_1 581571 . A G 26.4691 PASS DP=14;VDB=0.250121;SGB=-0.616816;RPB=0.301194;MQB=0.0493739;MQSB=0.140858;BQB=1;MQ0F=0.5;AF1=0.829413;AC1=1;DP4=4,4,6,0;MQ=15;FQ=-25.9966;PV4=0.0849151,1,1,1 GT:PL 0/1:55,0,1
Scaffold_1 581839 . A C 12.2722 PASS DP=16;VDB=0.314313;SGB=-0.556411;RPB=0.697593;MQB=0.511891;MQSB=0.968368;BQB=0.953497;MQ0F=0.3125;AF1=0.500009;AC1=1;DP4=3,6,0,4;MQ=18;FQ=11.2305;PV4=0.496504,0.316259,1,1 GT:PL 0/1:42,0,40
Scaffold_1 582056 . T C 41.9723 PASS DP=3;VDB=0.0389723;SGB=-0.511536;MQ0F=0;AF1=1;AC1=2;DP4=0,0,0,3;MQ=30;FQ=-35.9869 GT:PL 1/1:74,9,0
Scaffold_1 582214 . A T 31.7673 PASS DP=2;VDB=0.02;SGB=-0.453602;MQ0F=0;AF1=1;AC1=2;DP4=0,0,0,2;MQ=39;FQ=-32.988 GT:PL 1/1:63,6,0
Scaffold_1 582218 . A C 32.7667 PASS DP=2;VDB=0.02;SGB=-0.453602;MQ0F=0;AF1=1;AC1=2;DP4=0,0,0,2;MQ=39;FQ=-32.988 GT:PL 1/1:64,6,0
Scaffold_1 582267 . A C 28.2043 PASS DP=5;VDB=0.121629;SGB=-0.511536;RPB=0.666667;MQB=0.5;BQB=0.666667;MQ0F=0.4;AF1=0.730437;AC1=1;DP4=0,2,0,3;MQ=25;FQ=-24.9994;PV4=1,1,1,1 GT:PL 0/1:57,0,2
Scaffold_1 582277 . T C 21.7965 PASS DP=5;VDB=0.121629;SGB=-0.511536;RPB=1;MQB=1;BQB=1;MQ0F=0.4;AF1=1;AC1=2;DP4=0,1,0,3;MQ=28;FQ=-26.9944;PV4=1,0.333333,1,1 GT:PL 0/1:50,0,0
Scaffold_1 584472 . G A 36.0132 PASS DP=5;VDB=0.0681597;SGB=-0.511536;RPB=0;MQB=0;BQB=0.333333;MQ0F=0.2;AF1=1;AC1=2;DP4=2,0,3,0;MQ=25;FQ=-29.9901;PV4=1,0.143852,1,1 GT:PL 1/1:66,3,0
Scaffold_1 584726 . G A 30.5452 PASS DP=7;VDB=0.654404;SGB=-0.511536;RPB=0.607698;MQB=0.202566;MQSB=0.202566;BQB=1.01283;MQ0F=0.428571;AF1=1;AC1=2;DP4=4,0,0,3;MQ=21;FQ=-28.9912;PV4=0.0285714,1,1,0.489476 GT:PL 1/1:60,2,0
Scaffold_1 584768 . G T 28.0274 PASS DP=8;VDB=0.732596;SGB=-0.511536;RPB=0.450401;MQB=0.300267;MQSB=0.124046;BQB=0.900802;MQ0F=0.375;AF1=0.501582;AC1=1;DP4=4,1,0,3;MQ=24;FQ=-6.18309;PV4=0.142857,1,1,0.109972 GT:PL 0/1:58,0,22
Scaffold_1 584778 . C T 33.5433 PASS DP=8;VDB=0.740702;SGB=-0.511536;RPB=0.607698;MQB=0.202566;MQSB=0.202566;BQB=1.01283;MQ0F=0.375;AF1=1;AC1=2;DP4=4,0,0,3;MQ=21;FQ=-28.9912;PV4=0.0285714,1,1,0.0814278 GT:PL 1/1:63,2,0
Scaffold_1 585736 . C T 60.9723 PASS DP=3;VDB=0.0411132;SGB=-0.511536;MQ0F=0;AF1=1;AC1=2;DP4=0,0,3,0;MQ=60;FQ=-35.9869 GT:PL 1/1:93,9,0
Scaffold_1 585737 . G A 63.9723 PASS DP=3;VDB=0.0411132;SGB=-0.511536;MQ0F=0;AF1=1;AC1=2;DP4=0,0,3,0;MQ=60;FQ=-35.9869 GT:PL 1/1:96,9,0
Scaffold_1 602050 . C A 32.0097 PASS DP=13;VDB=0.610267;SGB=-0.556411;RPB=0.562708;MQB=0.200967;MQSB=0.950952;BQB=0.361741;MQ0F=0;AF1=0.5;AC1=1;DP4=3,4,3,1;MQ=54;FQ=35.0165;PV4=0.545455,0.0173659,0.00174341,0.354554 GT:PL 0/1:62,0,189
Scaffold_1 602092 . T C 12.272 PASS DP=9;VDB=0.0649539;SGB=-0.511536;RPB=0.150134;MQB=0.150134;MQSB=0.450401;BQB=0.300267;MQ0F=0;AF1=0.499984;AC1=1;DP4=2,3,3,0;MQ=51;FQ=15.1496;PV4=0.196429,0.0276008,7.58614e-05,1 GT:PL 0/1:42,0,146
Scaffold_1 602259 . A T 43.0073 PASS DP=11;VDB=0.0221621;SGB=-0.511536;RPB=0.346719;MQB=0.115573;MQSB=0.924584;BQB=0.115573;MQ0F=0;AF1=0.5;AC1=1;DP4=2,4,1,2;MQ=53;FQ=46.0153;PV4=1,1,1.18422e-05,1 GT:PL 0/1:73,0,155
Scaffold_1 606874 . C A 41.0074 PASS DP=13;VDB=0.0221621;SGB=-0.511536;RPB=0.151887;MQB=1;MQSB=1;BQB=0.962269;MQ0F=0;AF1=0.5;AC1=1;DP4=4,5,0,3;MQ=60;FQ=44.0154;PV4=0.490909,0.442118,1,0.0313797 GT:PL 0/1:71,0,243
Scaffold_1 609766 . G T 22.0341 PASS DP=6;VDB=0.66;SGB=-0.453602;RPB=1;MQB=1;MQSB=1;BQB=1;MQ0F=0;AF1=0.499999;AC1=1;DP4=1,1,2,0;MQ=60;FQ=23.5786;PV4=1,1,1,1 GT:PL 0/1:52,0,56
Scaffold_1 617812 . G A 16.1143 PASS DP=8;VDB=0.220755;SGB=-0.511536;RPB=0.750668;MQB=0.150134;MQSB=0.833333;BQB=0.450401;MQ0F=0.125;AF1=0.499994;AC1=1;DP4=1,4,1,2;MQ=48;FQ=19.069;PV4=1,1,0.00750593,1 GT:PL 0/1:46,0,131
Scaffold_1 625580 . C A 46.0072 PASS DP=10;VDB=0.0221621;SGB=-0.511536;RPB=0.115573;MQB=0.924584;MQSB=1;BQB=0.924584;MQ0F=0;AF1=0.5;AC1=1;DP4=2,4,0,3;MQ=60;FQ=49.0153;PV4=0.5,1,1,0.268803 GT:PL 0/1:76,0,168
Scaffold_1 626553 . T C 30.0112 PASS DP=11;VDB=0.947001;SGB=-0.556411;RPB=0.89338;MQB=0.0812164;MQSB=0.162433;BQB=0.243649;MQ0F=0;AF1=0.5;AC1=1;DP4=1,4,4,0;MQ=49;FQ=33.0172;PV4=0.047619,1,0.00166663,1 GT:PL 0/1:60,0,112
Scaffold_1 626560 . A G 24.0241 PASS DP=10;VDB=0.959397;SGB=-0.556411;RPB=0.868321;MQB=0.124046;MQSB=0.150134;BQB=0.868321;MQ0F=0;AF1=0.499999;AC1=1;DP4=1,3,4,0;MQ=46;FQ=27.0236;PV4=0.142857,0.459519,0.0016648,1 GT:PL 0/1:54,0,112
Scaffold_1 626622 . C T 36.0081 PASS DP=11;VDB=0.0532881;SGB=-0.511536;RPB=0.221971;MQB=0.221971;MQSB=0.200967;BQB=0.954207;MQ0F=0;AF1=0.5;AC1=1;DP4=4,4,3,0;MQ=50;FQ=39.0157;PV4=0.236364,1,0.0569308,0.152445 GT:PL 0/1:66,0,207
Scaffold_1 626642 . G A 50.0072 PASS DP=14;VDB=0.036866;SGB=-0.556411;RPB=0.746718;MQB=0.543691;MQSB=0.372712;BQB=0.793923;MQ0F=0;AF1=0.5;AC1=1;DP4=2,6,4,0;MQ=48;FQ=53.0153;PV4=0.0606061,0.0834448,0.0964839,1 GT:PL 0/1:80,0,190
Scaffold_1 626643 . C G 54.0072 PASS DP=15;VDB=0.0395055;SGB=-0.556411;RPB=0.816687;MQB=0.444858;MQSB=0.547669;BQB=0.697676;MQ0F=0;AF1=0.5;AC1=1;DP4=4,6,4,0;MQ=49;FQ=57.0154;PV4=0.0849151,1,0.0776451,1 GT:PL 0/1:84,0,215
Scaffold_1 626667 . C T 50.0072 PASS DP=15;VDB=0.0395055;SGB=-0.556411;RPB=0.996401;MQB=0.543691;MQSB=0.6821;BQB=0.913799;MQ0F=0;AF1=0.5;AC1=1;DP4=3,5,4,0;MQ=48;FQ=53.0153;PV4=0.0808081,0.125058,0.0964839,1 GT:PL 0/1:80,0,203
Scaffold_1 626673 . G A 73.0074 PASS DP=17;VDB=0.0478623;SGB=-0.590765;RPB=0.998612;MQB=0.120935;MQSB=0.99881;BQB=0.893597;MQ0F=0;AF1=0.5;AC1=1;DP4=6,6,4,1;MQ=50;FQ=76.0156;PV4=0.338235,1,0.00827797,1 GT:PL 0/1:103,0,255
Scaffold_1 626675 . G A 74.0075 PASS DP=17;VDB=0.0275165;SGB=-0.616816;RPB=0.986852;MQB=0.0187517;MQSB=0.95083;BQB=0.182684;MQ0F=0;AF1=0.5;AC1=1;DP4=5,5,4,2;MQ=51;FQ=77.0156;PV4=0.632867,0.00786168,1.48304e-05,1 GT:PL 0/1:104,0,249
Scaffold_1 626676 . G A 71.0074 PASS DP=17;VDB=0.0478623;SGB=-0.590765;RPB=0.954207;MQB=0.114463;MQSB=0.894839;BQB=0.339596;MQ0F=0;AF1=0.5;AC1=1;DP4=5,5,4,1;MQ=50;FQ=74.0156;PV4=0.58042,0.0773532,0.00924748,1 GT:PL 0/1:101,0,244
Scaffold_1 626679 . G A 123.008 PASS DP=16;VDB=0.0110479;SGB=-0.636426;RPB=0.914264;MQB=0.00385331;MQSB=0.95083;BQB=0.360231;MQ0F=0;AF1=0.5;AC1=1;DP4=5,4,4,3;MQ=51;FQ=126.016;PV4=1,0.0279879,1.06022e-08,1 GT:PL 0/1:153,0,234
Scaffold_1 626684 . T G 52.0072 PASS DP=16;VDB=0.024992;SGB=-0.590765;RPB=0.976181;MQB=0.0137638;MQSB=0.765017;BQB=0.958048;MQ0F=0;AF1=0.5;AC1=1;DP4=4,4,4,1;MQ=53;FQ=55.0154;PV4=0.56488,0.206192,3.51376e-08,1 GT:PL 0/1:82,0,216
Scaffold_1 626687 . C T 52.0072 PASS DP=16;VDB=0.0625499;SGB=-0.556411;RPB=0.939413;MQB=0.0391639;MQSB=0.991701;BQB=0.485537;MQ0F=0;AF1=0.5;AC1=1;DP4=5,5,3,1;MQ=53;FQ=55.0154;PV4=0.58042,0.0339199,7.53639e-05,1 GT:PL 0/1:82,0,254
Scaffold_1 626688 . A G 75.0075 PASS DP=16;VDB=0.0215714;SGB=-0.616816;RPB=0.918449;MQB=0.00632972;MQSB=1;BQB=0.972604;MQ0F=0;AF1=0.5;AC1=1;DP4=5,4,4,2;MQ=52;FQ=78.0156;PV4=1,0.174933,3.83844e-08,1 GT:PL 0/1:105,0,233
Scaffold_1 626691 . C T 67.0074 PASS DP=16;VDB=0.0456508;SGB=-0.590765;RPB=0.993603;MQB=0.044785;MQSB=0.95083;BQB=0.526391;MQ0F=0;AF1=0.5;AC1=1;DP4=5,6,4,1;MQ=51;FQ=70.0155;PV4=0.307692,0.19945,0.000224367,1 GT:PL 0/1:97,0,255
Scaffold_1 626693 . A G 105.008 PASS DP=18;VDB=0.0215714;SGB=-0.616816;RPB=0.968927;MQB=0.00408677;MQSB=0.980001;BQB=0.542747;MQ0F=0;AF1=0.5;AC1=1;DP4=7,4,4,2;MQ=53;FQ=108.016;PV4=1,1,2.16594e-09,1 GT:PL 0/1:135,0,235
Scaffold_1 626696 . G A 50.0072 PASS DP=19;VDB=0.0478623;SGB=-0.590765;RPB=0.733709;MQB=0.0307744;MQSB=0.781682;BQB=0.933727;MQ0F=0;AF1=0.5;AC1=1;DP4=7,7,4,1;MQ=52;FQ=53.0153;PV4=0.337805,0.138227,0.000128254,1 GT:PL 0/1:80,0,255
Scaffold_1 626714 . G A 154.008 PASS DP=20;VDB=0.244443;SGB=-0.651104;RPB=0.998843;MQB=0.00247875;MQSB=0.922371;BQB=0.22313;MQ0F=0;AF1=0.5;AC1=1;DP4=6,3,5,3;MQ=51;FQ=157.016;PV4=1,0.0139448,6.59835e-09,1 GT:PL 0/1:184,0,224
Scaffold_1 626717 . G A 57.0073 PASS DP=20;VDB=0.0501588;SGB=-0.590765;RPB=0.615186;MQB=0.0374702;MQSB=0.636257;BQB=0.555518;MQ0F=0;AF1=0.5;AC1=1;DP4=7,6,4,1;MQ=52;FQ=60.0154;PV4=0.595588,0.0421352,0.000233338,1 GT:PL 0/1:87,0,255
Scaffold_1 626728 . C T 58.0073 PASS DP=20;VDB=0.197286;SGB=-0.590765;RPB=0.980754;MQB=0.0329837;MQSB=0.663573;BQB=0.36007;MQ0F=0;AF1=0.5;AC1=1;DP4=7,6,4,1;MQ=52;FQ=61.0154;PV4=0.595588,0.0486041,0.000204856,1 GT:PL 0/1:88,0,255
Scaffold_1 626805 . T C 56.0072 PASS DP=12;VDB=0.200442;SGB=-0.590765;RPB=0.297172;MQB=0.0297172;MQSB=0.0891517;BQB=0.208021;MQ0F=0;AF1=0.5;AC1=1;DP4=5,1,0,5;MQ=52;FQ=58.7497;PV4=0.0151515,1,0.0109586,1 GT:PL 0/1:86,0,98
Scaffold_1 626808 . A G 25.0205 PASS DP=13;VDB=0.421803;SGB=-0.556411;RPB=0.62023;MQB=0.124046;MQSB=0.300267;BQB=0.124046;MQ0F=0;AF1=0.499999;AC1=1;DP4=3,1,0,4;MQ=53;FQ=27.9537;PV4=0.142857,1,0.0631412,1 GT:PL 0/1:55,0,73
Scaffold_1 626810 . C T 13.2188 PASS DP=13;VDB=0.02;SGB=-0.453602;RPB=0;MQB=0.444444;MQSB=0.0891517;BQB=0.333333;MQ0F=0;AF1=0.499987;AC1=1;DP4=6,3,0,2;MQ=55;FQ=16.1222;PV4=0.181818,1,1,1 GT:PL 0/1:43,0,180
Scaffold_1 626814 . T G 59.0073 PASS DP=12;VDB=0.22001;SGB=-0.590765;RPB=0.297172;MQB=0.0297172;MQSB=0.0891517;BQB=0.0594345;MQ0F=0;AF1=0.5;AC1=1;DP4=5,1,0,5;MQ=52;FQ=62.0151;PV4=0.0151515,1,0.0109586,1 GT:PL 0/1:89,0,130
Scaffold_1 626815 . T C 59.0073 PASS DP=12;VDB=0.206846;SGB=-0.590765;RPB=0.297172;MQB=0.0297172;MQSB=0.0891517;BQB=0.208021;MQ0F=0;AF1=0.5;AC1=1;DP4=5,1,0,5;MQ=52;FQ=62.015;PV4=0.0151515,1,0.0109586,1 GT:PL 0/1:89,0,129
Scaffold_1 626821 . C A 13.2188 PASS DP=12;VDB=0.02;SGB=-0.453602;RPB=0.25;MQB=0.75;MQSB=0.274945;BQB=0.8125;MQ0F=0;AF1=0.499987;AC1=1;DP4=3,5,0,2;MQ=51;FQ=16.1222;PV4=1,1,1,1 GT:PL 0/1:43,0,180
Scaffold_1 626828 . G A 37.0079 PASS DP=13;VDB=0.336489;SGB=-0.511536;RPB=0.655816;MQB=1;MQSB=0.666667;BQB=0.716531;MQ0F=0;AF1=0.5;AC1=1;DP4=2,6,0,3;MQ=51;FQ=40.0156;PV4=1,1,1,1 GT:PL 0/1:67,0,149
Scaffold_1 626836 . T C 102.008 PASS DP=12;VDB=0.329692;SGB=-0.616816;RPB=0.809011;MQB=0.231146;MQSB=0.642857;BQB=0.115573;MQ0F=0;AF1=0.500001;AC1=1;DP4=1,2,1,5;MQ=51;FQ=29.0205;PV4=1,1,0.110053,1 GT:PL 0/1:132,0,56
Scaffold_1 626842 . T A 40.0075 PASS DP=13;VDB=0.553951;SGB=-0.636426;RPB=0.253351;MQB=0.0584657;MQSB=0.760054;BQB=0.506703;MQ0F=0;AF1=0.5;AC1=1;DP4=3,2,2,5;MQ=53;FQ=43.0152;PV4=0.558081,1,0.0551685,1 GT:PL 0/1:70,0,113
Scaffold_1 626850 . A C 127.008 PASS DP=11;VDB=0.553951;SGB=-0.636426;RPB=0.733186;MQB=0.183296;MQSB=0.916482;BQB=0.458241;MQ0F=0;AF1=0.5;AC1=1;DP4=1,2,2,5;MQ=51;FQ=44.0154;PV4=1,1,0.110153,1 GT:PL 0/1:157,0,71
Scaffold_1 626851 . G A 46.0072 PASS DP=11;VDB=0.318564;SGB=-0.511536;RPB=0.924584;MQB=0.924584;MQSB=1;BQB=0.809011;MQ0F=0;AF1=0.5;AC1=1;DP4=1,5,0,3;MQ=51;FQ=49.0099;PV4=1,1,1,1 GT:PL 0/1:76,0,105
Scaffold_1 626859 . G A 101.008 PASS DP=12;VDB=0.462817;SGB=-0.590765;RPB=0.838008;MQB=0.760054;MQSB=0.968069;BQB=0.935451;MQ0F=0;AF1=0.5;AC1=1;DP4=3,4,1,4;MQ=51;FQ=103.93;PV4=0.575758,1,1,0.483278 GT:PL 0/1:131,0,148
Scaffold_1 626867 . G A 50.0072 PASS DP=12;VDB=0.686815;SGB=-0.556411;RPB=0.727822;MQB=0.111973;MQSB=0.458241;BQB=1.00775;MQ0F=0;AF1=0.5;AC1=1;DP4=0,6,3,1;MQ=52;FQ=53.0153;PV4=0.0333333,0.350635,0.0383551,0.284396 GT:PL 0/1:80,0,132
Scaffold_1 626883 . C T 67.0074 PASS DP=12;VDB=0.919254;SGB=-0.590765;RPB=0.950952;MQB=0.0594345;MQSB=0.716531;BQB=0.950952;MQ0F=0;AF1=0.5;AC1=1;DP4=0,6,3,2;MQ=50;FQ=70.0148;PV4=0.0606061,0.450013,0.0159474,0.0437709 GT:PL 0/1:97,0,135
Scaffold_1 626886 . C T 65.0073 PASS DP=13;VDB=0.919254;SGB=-0.590765;RPB=0.935451;MQB=0.0389771;MQSB=0.968069;BQB=0.896474;MQ0F=0;AF1=0.5;AC1=1;DP4=1,6,3,2;MQ=51;FQ=68.0155;PV4=0.222222,1,0.00932783,0.258732 GT:PL 0/1:95,0,171
Scaffold_1 626894 . G A 29.0123 PASS DP=13;VDB=0.131948;SGB=-0.511536;RPB=0.458241;MQB=0.183296;MQSB=0.503877;BQB=0.366593;MQ0F=0;AF1=0.5;AC1=1;DP4=1,6,3,0;MQ=56;FQ=32.0178;PV4=0.0333333,0.00698676,0.0112132,1 GT:PL 0/1:59,0,179
Scaffold_1 626898 . C G 66.0074 PASS DP=11;VDB=0.598008;SGB=-0.556411;RPB=0.643095;MQB=0.924449;MQSB=0.742931;BQB=0.924449;MQ0F=0;AF1=0.5;AC1=1;DP4=5,2,0,4;MQ=56;FQ=69.0155;PV4=0.0606061,1,1,1 GT:PL 0/1:96,0,181
Scaffold_1 626901 . T C 46.0072 PASS DP=11;VDB=0.131948;SGB=-0.511536;RPB=0.458241;MQB=0.183296;MQSB=0.503877;BQB=0.733186;MQ0F=0;AF1=0.5;AC1=1;DP4=1,6,3,0;MQ=56;FQ=49.0153;PV4=0.0333333,1,0.0112132,1 GT:PL 0/1:76,0,170
Scaffold_1 626909 . T C 71.0074 PASS DP=10;VDB=0.585652;SGB=-0.556411;RPB=0.335918;MQB=1.00775;MQSB=0.503877;BQB=0.503877;MQ0F=0;AF1=0.5;AC1=1;DP4=4,2,0,4;MQ=56;FQ=74.0156;PV4=0.0761905,1,1,0.0299189 GT:PL 0/1:101,0,166
Scaffold_1 626922 . C T 52.0072 PASS DP=8;VDB=0.131948;SGB=-0.511536;RPB=0.750668;MQB=0.150134;MQSB=0.248092;BQB=0.900802;MQ0F=0;AF1=0.5;AC1=1;DP4=1,4,3,0;MQ=56;FQ=55.0154;PV4=0.142857,1,0.00855088,1 GT:PL 0/1:82,0,147
Scaffold_1 626924 . C A 49.0072 PASS DP=8;VDB=0.137328;SGB=-0.511536;RPB=0.750668;MQB=0.150134;MQSB=0.248092;BQB=0.900802;MQ0F=0;AF1=0.5;AC1=1;DP4=1,4,3,0;MQ=56;FQ=52.0153;PV4=0.142857,1,0.00855088,1 GT:PL 0/1:79,0,138
Scaffold_1 626926 . T C 52.0072 PASS DP=8;VDB=0.137328;SGB=-0.511536;RPB=0.750668;MQB=0.150134;MQSB=0.248092;BQB=0.600535;MQ0F=0;AF1=0.5;AC1=1;DP4=1,4,3,0;MQ=56;FQ=55.0153;PV4=0.142857,1,0.00855088,1 GT:PL 0/1:82,0,129
Scaffold_1 626928 . G A 105.008 PASS DP=8;VDB=0.0602347;SGB=-0.590765;RPB=0.900802;MQB=0.300267;MQSB=0.248092;BQB=0.450401;MQ0F=0;AF1=0.5;AC1=1;DP4=1,2,3,2;MQ=56;FQ=62.0153;PV4=1,0.0853489,0.0748954,1 GT:PL 0/1:135,0,89
Scaffold_1 626931 . T C 120.008 PASS DP=8;VDB=0.0643982;SGB=-0.590765;RPB=0.900802;MQB=0.300267;MQSB=0.248092;BQB=0.900802;MQ0F=0;AF1=0.5;AC1=1;DP4=1,2,3,2;MQ=56;FQ=47.0153;PV4=1,1,0.0748954,1 GT:PL 0/1:150,0,74
Scaffold_1 626934 . A C 111.008 PASS DP=8;VDB=0.0643982;SGB=-0.590765;RPB=0.2;MQB=0.2;MQSB=0.202566;BQB=1;MQ0F=0;AF1=0.500005;AC1=1;DP4=0,2,3,2;MQ=55;FQ=20.058;PV4=0.428571,1,0.122685,1 GT:PL 0/1:141,0,47
Scaffold_1 626939 . T C 123.008 PASS DP=9;VDB=0.0658346;SGB=-0.590765;RPB=0.89338;MQB=0.162433;MQSB=0.487298;BQB=0.730948;MQ0F=0;AF1=0.5;AC1=1;DP4=2,2,3,2;MQ=57;FQ=94.0131;PV4=1,1,0.0466566,1 GT:PL 0/1:153,0,121
Scaffold_1 626951 . C T 46.0072 PASS DP=9;VDB=0.137328;SGB=-0.511536;RPB=0.809011;MQB=0.346719;MQSB=0.89338;BQB=0.924584;MQ0F=0;AF1=0.5;AC1=1;DP4=2,4,3,0;MQ=54;FQ=49.0153;PV4=0.166667,1,0.261171,1 GT:PL 0/1:76,0,158
Scaffold_1 626957 . G A 39.0076 PASS DP=10;VDB=0.137328;SGB=-0.511536;RPB=0.809011;MQB=0.346719;MQSB=0.89338;BQB=0.924584;MQ0F=0;AF1=0.5;AC1=1;DP4=2,4,3,0;MQ=54;FQ=42.0155;PV4=0.166667,0.264497,0.261171,1 GT:PL 0/1:69,0,168
Scaffold_1 626962 . C T 19.061 PASS DP=12;VDB=0.913952;SGB=-0.511536;RPB=0.924584;MQB=0.924584;MQSB=0.89338;BQB=0.809011;MQ0F=0;AF1=0.499997;AC1=1;DP4=5,1,0,3;MQ=54;FQ=22.0421;PV4=0.047619,0.0811728,0.240054,0.406208 GT:PL 0/1:49,0,142
Scaffold_1 626970 . G T 14.176 PASS DP=10;VDB=0.78;SGB=-0.453602;RPB=1;MQB=0.5;MQSB=0.900802;BQB=0.833333;MQ0F=0;AF1=0.49999;AC1=1;DP4=5,1,0,2;MQ=53;FQ=17.1004;PV4=0.107143,1,0.114831,1 GT:PL 0/1:44,0,153
Scaffold_1 626986 . T C 50.0072 PASS DP=10;VDB=0.663511;SGB=-0.511536;RPB=0.150134;MQB=0.150134;MQSB=0.833333;BQB=0.300267;MQ0F=0;AF1=0.5;AC1=1;DP4=1,4,1,2;MQ=55;FQ=52.8801;PV4=1,1,0.0115679,1 GT:PL 0/1:80,0,95
Scaffold_1 626990 . T C 60.0073 PASS DP=10;VDB=0.654404;SGB=-0.511536;RPB=0.28717;MQB=0.28717;MQSB=1;BQB=0.28717;MQ0F=0;AF1=0.5;AC1=1;DP4=1,2,1,2;MQ=53;FQ=41.9811;PV4=1,1,0.0457178,0.460779 GT:PL 0/1:90,0,69
Scaffold_1 627006 . T C 13.2188 PASS DP=9;VDB=0.76;SGB=-0.453602;RPB=0.8;MQB=0;MQSB=1.01283;BQB=0.2;MQ0F=0;AF1=0.499987;AC1=1;DP4=2,3,1,1;MQ=54;FQ=16.1222;PV4=1,1,2.27886e-08,0.0586934 GT:PL 0/1:43,0,119
Scaffold_1 627018 . T C 10.42 PASS DP=9;VDB=0.78;SGB=-0.453602;RPB=1;MQB=0;MQSB=0.75;BQB=0.166667;MQ0F=0;AF1=0.499975;AC1=1;DP4=1,5,1,1;MQ=54;FQ=13.2265;PV4=0.464286,1,7.65157e-10,0.0390704 GT:PL 0/1:40,0,127
Scaffold_1 627020 . A G 13.2188 PASS DP=9;VDB=0.8;SGB=-0.453602;RPB=1;MQB=0;MQSB=0.8;BQB=0.2;MQ0F=0;AF1=0.499987;AC1=1;DP4=1,4,1,1;MQ=54;FQ=16.1222;PV4=1,1,2.27886e-08,0.0586934 GT:PL 0/1:43,0,113
Scaffold_1 627061 . C T 10.42 PASS DP=11;VDB=0.52;SGB=-0.453602;RPB=0.375;MQB=0;MQSB=0.625;BQB=0.75;MQ0F=0;AF1=0.499975;AC1=1;DP4=1,7,1,1;MQ=57;FQ=13.2265;PV4=0.377778,1,0.00424685,0.149094 GT:PL 0/1:40,0,172
Scaffold_1 627087 . C T 17.0924 PASS DP=10;VDB=0.5;SGB=-0.453602;RPB=0.428571;MQB=0;MQSB=0.642857;BQB=0.714286;MQ0F=0;AF1=0.499995;AC1=1;DP4=1,6,1,1;MQ=57;FQ=20.058;PV4=0.416667,1,0.00770493,1 GT:PL 0/1:47,0,162
Scaffold_1 627094 . C T 45.0072 PASS DP=9;VDB=0.17915;SGB=-0.511536;RPB=0.577865;MQB=0.115573;MQSB=1;BQB=0.924584;MQ0F=0;AF1=0.5;AC1=1;DP4=0,6,1,2;MQ=55;FQ=48.0153;PV4=0.333333,0.313142,0.00325588,1 GT:PL 0/1:75,0,134
Scaffold_1 627099 . T C 55.0072 PASS DP=9;VDB=0.292464;SGB=-0.511536;RPB=0.150134;MQB=0.150134;MQSB=1;BQB=0.750668;MQ0F=0;AF1=0.5;AC1=1;DP4=0,5,1,2;MQ=56;FQ=58.015;PV4=0.375,0.109972,0.0355732,1 GT:PL 0/1:85,0,126
Scaffold_1 627106 . A G 68.0074 PASS DP=9;VDB=0.138245;SGB=-0.556411;RPB=0.162433;MQB=0.0812164;MQSB=1;BQB=0.649731;MQ0F=0;AF1=0.5;AC1=1;DP4=0,5,1,3;MQ=55;FQ=70.2254;PV4=0.444444,1,0.0130644,1 GT:PL 0/1:98,0,105
Scaffold_1 627118 . G A 47.0072 PASS DP=8;VDB=0.185719;SGB=-0.511536;RPB=0.900802;MQB=0.150134;MQSB=0.75;BQB=0.750668;MQ0F=0;AF1=0.5;AC1=1;DP4=1,4,1,2;MQ=54;FQ=50.0153;PV4=1,1,0.00721639,1 GT:PL 0/1:77,0,126
Scaffold_1 627133 . C A 47.0072 PASS DP=8;VDB=0.172729;SGB=-0.511536;RPB=0.150134;MQB=0.150134;MQSB=0.75;BQB=0.900802;MQ0F=0;AF1=0.5;AC1=1;DP4=1,4,1,2;MQ=54;FQ=50.0153;PV4=1,1,0.00721639,1 GT:PL 0/1:77,0,125
Scaffold_1 627134 . C T 26.0177 PASS DP=8;VDB=0.5;SGB=-0.453602;RPB=0.25;MQB=0;MQSB=0.75;BQB=0.75;MQ0F=0;AF1=0.499999;AC1=1;DP4=1,3,1,1;MQ=55;FQ=29.0205;PV4=1,1,0.0477141,0.357871 GT:PL 0/1:56,0,121
Scaffold_1 627150 . G A 20.0499 PASS DP=8;VDB=0.32;SGB=-0.453602;RPB=0.25;MQB=0;MQSB=0.25;BQB=0.5;MQ0F=0;AF1=0.499997;AC1=1;DP4=2,2,0,2;MQ=56;FQ=23.0366;PV4=0.466667,0.0889039,0.0379866,1 GT:PL 0/1:50,0,133
Scaffold_1 627157 . G A 24.0241 PASS DP=8;VDB=0.32;SGB=-0.453602;RPB=0.2;MQB=0;MQSB=0.4;BQB=0.4;MQ0F=0;AF1=0.499999;AC1=1;DP4=2,3,0,2;MQ=56;FQ=27.0236;PV4=1,1,0.0191435,0.274698 GT:PL 0/1:54,0,138
Scaffold_1 627166 . T G 31.0104 PASS DP=7;VDB=0.06;SGB=-0.453602;RPB=0.666667;MQB=0;MQSB=0.333333;BQB=0.666667;MQ0F=0;AF1=0.5;AC1=1;DP4=2,1,0,2;MQ=58;FQ=34.0159;PV4=0.4,1,0.000611201,1 GT:PL 0/1:61,0,98
Scaffold_1 627367 . C G 14.176 PASS DP=8;VDB=0.142856;SGB=-0.511536;RPB=0.900802;MQB=0.150134;MQSB=0.750668;BQB=0.600535;MQ0F=0;AF1=0.49999;AC1=1;DP4=4,1,1,2;MQ=52;FQ=17.1004;PV4=0.464286,0.0830066,0.00385528,1 GT:PL 0/1:44,0,143
Scaffold_1 627398 . G T 24.0241 PASS DP=8;VDB=0.22;SGB=-0.453602;RPB=0.8;MQB=0.4;MQSB=0.4;BQB=1;MQ0F=0;AF1=0.499999;AC1=1;DP4=5,0,0,2;MQ=51;FQ=27.0236;PV4=0.047619,0.311255,0.301923,1 GT:PL 0/1:54,0,111
Scaffold_1 631616 . C T 33.0091 PASS DP=12;VDB=0.340858;SGB=-0.590765;RPB=0.564628;MQB=0.0297172;MQSB=0.683497;BQB=0.297172;MQ0F=0;AF1=0.5;AC1=1;DP4=2,4,3,2;MQ=48;FQ=36.0162;PV4=0.5671,0.0387318,0.000218352,0.219867 GT:PL 0/1:63,0,174
Scaffold_1 631618 . T C 42.0073 PASS DP=12;VDB=0.275479;SGB=-0.616816;RPB=0.372712;MQB=0.0169414;MQSB=0.47436;BQB=0.71154;MQ0F=0;AF1=0.5;AC1=1;DP4=2,4,4,2;MQ=46;FQ=45.0154;PV4=0.5671,0.196561,7.43653e-05,0.281407 GT:PL 0/1:72,0,165
Scaffold_1 631642 . C T 33.0091 PASS DP=11;VDB=0.266887;SGB=-0.616816;RPB=0.564628;MQB=0.0297172;MQSB=0.297172;BQB=0.356607;MQ0F=0;AF1=0.5;AC1=1;DP4=1,4,4,2;MQ=44;FQ=36.0162;PV4=0.242424,0.051569,0.000232035,1 GT:PL 0/1:63,0,137
Scaffold_1 631647 . A G 46.0072 PASS DP=10;VDB=0.275478;SGB=-0.616816;RPB=0.783809;MQB=0.0559863;MQSB=0.428556;BQB=0.503877;MQ0F=0;AF1=0.5;AC1=1;DP4=1,3,4,2;MQ=42;FQ=49.015;PV4=0.52381,0.0612289,0.000742207,1 GT:PL 0/1:76,0,117
Scaffold_1 631663 . G A 39.0076 PASS DP=12;VDB=0.300397;SGB=-0.590765;RPB=0.742931;MQB=0.0297172;MQSB=0.683497;BQB=0.950952;MQ0F=0;AF1=0.5;AC1=1;DP4=2,4,3,2;MQ=48;FQ=42.0155;PV4=0.5671,0.41618,0.000180061,1 GT:PL 0/1:69,0,154
Scaffold_1 631675 . C T 11.3381 PASS DP=11;VDB=0.220638;SGB=-0.556411;RPB=0.649731;MQB=0.0812164;MQSB=0.89338;BQB=0.730948;MQ0F=0;AF1=0.49998;AC1=1;DP4=2,3,2,2;MQ=47;FQ=14.1838;PV4=1,0.139074,0.000239625,1 GT:PL 0/1:41,0,151
Scaffold_1 631721 . A T 30.0112 PASS DP=10;VDB=0.913952;SGB=-0.511536;RPB=0.600535;MQB=0.150134;MQSB=0.62023;BQB=0.900802;MQ0F=0;AF1=0.5;AC1=1;DP4=2,3,2,1;MQ=51;FQ=33.0172;PV4=1,1,0.0057533,1 GT:PL 0/1:60,0,127
Scaffold_1 631727 . T C 32.0097 PASS DP=9;VDB=0.88;SGB=-0.453602;RPB=0.5;MQB=0;MQSB=0.861511;BQB=0.5;MQ0F=0;AF1=0.5;AC1=1;DP4=2,2,1,1;MQ=54;FQ=35.0164;PV4=1,1,0,1 GT:PL 0/1:62,0,117
Scaffold_1 631732 . G A 34.0087 PASS DP=9;VDB=0.928514;SGB=-0.511536;RPB=0.810265;MQB=0.202566;MQSB=0.810265;BQB=0.810265;MQ0F=0;AF1=0.5;AC1=1;DP4=2,2,2,1;MQ=50;FQ=37.016;PV4=1,0.204989,0.0106852,1 GT:PL 0/1:64,0,127
Scaffold_1 631798 . T C 19.061 PASS DP=10;VDB=0.197777;SGB=-0.556411;RPB=0.810265;MQB=0.202566;MQSB=0;BQB=0.202566;MQ0F=0;AF1=0.499997;AC1=1;DP4=3,0,2,2;MQ=43;FQ=21.9743;PV4=0.428571,1,0.00492365,1 GT:PL 0/1:49,0,67
Scaffold_1 631801 . G A 14.176 PASS DP=9;VDB=0.197777;SGB=-0.556411;RPB=0.649731;MQB=0.0812164;MQSB=0.462292;BQB=0.89338;MQ0F=0;AF1=0.49999;AC1=1;DP4=4,1,2,2;MQ=47;FQ=17.1004;PV4=0.52381,1,0.000476518,1 GT:PL 0/1:44,0,138
Scaffold_1 631811 . G A 28.0137 PASS DP=9;VDB=0.284843;SGB=-0.590765;RPB=0.900802;MQB=0.150134;MQSB=0.150134;BQB=0.450401;MQ0F=0;AF1=0.5;AC1=1;DP4=3,0,2,3;MQ=41;FQ=30.0461;PV4=0.196429,1,0.00172264,0.373334 GT:PL 0/1:58,0,64
Scaffold_1 631847 . G A 31.0104 PASS DP=9;VDB=0.251321;SGB=-0.590765;RPB=0.150134;MQB=0.150134;MQSB=0.750668;BQB=0.150134;MQ0F=0;AF1=0.5;AC1=1;DP4=1,2,2,3;MQ=41;FQ=33.227;PV4=1,1,0.00172264,1 GT:PL 0/1:61,0,68
Scaffold_1 631939 . G A 70.0074 PASS DP=10;VDB=0.485334;SGB=-0.590765;RPB=0.238087;MQB=0.142852;MQSB=0.916482;BQB=0.904729;MQ0F=0;AF1=0.5;AC1=1;DP4=2,3,1,4;MQ=53;FQ=73.0145;PV4=1,0.417791,0.0297154,1 GT:PL 0/1:100,0,136
Scaffold_1 631941 . A T 79.0075 PASS DP=10;VDB=0.471814;SGB=-0.590765;RPB=0.238087;MQB=0.142852;MQSB=0.916482;BQB=0.666643;MQ0F=0;AF1=0.5;AC1=1;DP4=2,3,1,4;MQ=53;FQ=81.9614;PV4=1,1,0.0297154,1 GT:PL 0/1:109,0,128
Scaffold_1 631943 . T C 59.0073 PASS DP=11;VDB=0.462817;SGB=-0.590765;RPB=0.406082;MQB=0.162433;MQSB=1;BQB=0.89338;MQ0F=0;AF1=0.5;AC1=1;DP4=1,3,1,4;MQ=52;FQ=62.0086;PV4=1,0.138539,0.0470407,0.285414 GT:PL 0/1:89,0,117
Scaffold_1 631966 . A T 54.0072 PASS DP=10;VDB=0.0821847;SGB=-0.556411;RPB=1.00775;MQB=0.167959;MQSB=0.857112;BQB=1.00775;MQ0F=0;AF1=0.5;AC1=1;DP4=4,2,1,3;MQ=56;FQ=57.0154;PV4=0.52381,0.215771,0.0366196,1 GT:PL 0/1:84,0,162
Scaffold_1 631974 . G C 52.0072 PASS DP=11;VDB=0.109082;SGB=-0.556411;RPB=0.924449;MQB=0.200967;MQSB=0.8618;BQB=0.643095;MQ0F=0;AF1=0.5;AC1=1;DP4=5,2,1,3;MQ=56;FQ=55.0154;PV4=0.242424,0.0613571,0.0254452,1 GT:PL 0/1:82,0,187
Scaffold_1 631996 . A G 35.0083 PASS DP=11;VDB=0.0681597;SGB=-0.511536;RPB=0.809011;MQB=0.346719;MQSB=0.487298;BQB=0.346719;MQ0F=0;AF1=0.5;AC1=1;DP4=5,1,0,3;MQ=57;FQ=38.0158;PV4=0.047619,1,0.0700198,1 GT:PL 0/1:65,0,132
Scaffold_1 632031 . G A 41.0074 PASS DP=10;VDB=0.0560361;SGB=-0.511536;RPB=0.150134;MQB=0.450401;MQSB=0.62023;BQB=0.900802;MQ0F=0;AF1=0.5;AC1=1;DP4=4,1,0,3;MQ=57;FQ=44.0154;PV4=0.142857,0.240809,0.0931835,1 GT:PL 0/1:71,0,164
Scaffold_1 632509 . T G 17.0924 PASS DP=10;VDB=0.58;SGB=-0.453602;RPB=0.875;MQB=0;MQSB=0.952347;BQB=0.6875;MQ0F=0;AF1=0.499995;AC1=1;DP4=4,4,1,1;MQ=57;FQ=20.058;PV4=1,0.36679,0,1 GT:PL 0/1:47,0,220
Scaffold_1 632523 . T C 20.0499 PASS DP=10;VDB=0.58;SGB=-0.453602;RPB=0.875;MQB=0;MQSB=0.895781;BQB=0.875;MQ0F=0;AF1=0.499997;AC1=1;DP4=5,3,1,1;MQ=57;FQ=23.0366;PV4=1,1,0,1 GT:PL 0/1:50,0,219
Scaffold_1 632544 . T C 20.0499 PASS DP=10;VDB=0.6;SGB=-0.453602;RPB=0.625;MQB=0;MQSB=0.952347;BQB=0.75;MQ0F=0;AF1=0.499997;AC1=1;DP4=4,4,1,1;MQ=57;FQ=23.0366;PV4=1,1,0,1 GT:PL 0/1:50,0,212
Scaffold_1 632550 . G A 20.0499 PASS DP=10;VDB=0.6;SGB=-0.453602;RPB=0.625;MQB=0;MQSB=0.952347;BQB=0.75;MQ0F=0;AF1=0.499997;AC1=1;DP4=4,4,1,1;MQ=57;FQ=23.0366;PV4=1,1,0,1 GT:PL 0/1:50,0,218
Scaffold_1 632562 . A C 20.0499 PASS DP=10;VDB=0.6;SGB=-0.453602;RPB=0.5625;MQB=0;MQSB=0.952347;BQB=0.875;MQ0F=0;AF1=0.499997;AC1=1;DP4=4,4,1,1;MQ=57;FQ=23.0366;PV4=1,1,0,1 GT:PL 0/1:50,0,224
Scaffold_1 632563 . A G 23.0285 PASS DP=10;VDB=0.6;SGB=-0.453602;RPB=0.571429;MQB=0;MQSB=0.89338;BQB=0.857143;MQ0F=0;AF1=0.499999;AC1=1;DP4=3,4,1,1;MQ=56;FQ=26.0258;PV4=1,1,0,1 GT:PL 0/1:53,0,202
Scaffold_1 632795 . A T 24.0241 PASS DP=9;VDB=0.76;SGB=-0.453602;RPB=0.857143;MQB=0;MQSB=0.974597;BQB=0.285714;MQ0F=0;AF1=0.499999;AC1=1;DP4=3,4,1,1;MQ=57;FQ=27.0236;PV4=1,1,3.92841e-07,0.116078 GT:PL 0/1:54,0,163
Scaffold_1 632822 . G T 23.0285 PASS DP=8;VDB=0.76;SGB=-0.453602;RPB=1;MQB=0;MQSB=0.992367;BQB=0.666667;MQ0F=0;AF1=0.499999;AC1=1;DP4=3,3,1,1;MQ=56;FQ=26.0258;PV4=1,0.209877,2.9338e-06,1 GT:PL 0/1:53,0,182
Scaffold_1 632825 . T G 30.0112 PASS DP=8;VDB=0.76;SGB=-0.453602;RPB=1;MQB=0;MQSB=1.01283;BQB=0.2;MQ0F=0;AF1=0.5;AC1=1;DP4=2,3,1,1;MQ=56;FQ=33.0172;PV4=1,1,2.20521e-05,1 GT:PL 0/1:60,0,133
Scaffold_1 632826 . T C 21.0411 PASS DP=8;VDB=0.74;SGB=-0.453602;RPB=1;MQB=0;MQSB=1.01283;BQB=0.9;MQ0F=0;AF1=0.499998;AC1=1;DP4=2,3,1,1;MQ=56;FQ=24.0321;PV4=1,0.433761,2.20521e-05,1 GT:PL 0/1:51,0,143
Scaffold_1 632829 . T C 18.0749 PASS DP=9;VDB=0.74;SGB=-0.453602;RPB=1;MQB=0;MQSB=0.992367;BQB=0.916667;MQ0F=0;AF1=0.499996;AC1=1;DP4=3,3,1,1;MQ=56;FQ=21.0492;PV4=1,1,2.9338e-06,1 GT:PL 0/1:48,0,159
Scaffold_1 633146 . C A 28.0137 PASS DP=6;VDB=0.02;SGB=-0.453602;RPB=0.5;MQB=1;MQSB=0.861511;BQB=0.25;MQ0F=0;AF1=0.5;AC1=1;DP4=3,1,0,2;MQ=60;FQ=31.0183;PV4=0.4,1,1,1 GT:PL 0/1:58,0,101
Scaffold_1 633832 . A G 24.0241 PASS DP=14;VDB=0.184775;SGB=-0.556411;RPB=0.367879;MQB=0.0183156;MQSB=0.0561348;BQB=0.99005;MQ0F=0.0714286;AF1=0.499999;AC1=1;DP4=1,9,4,0;MQ=53;FQ=27.0236;PV4=0.00499501,0.429544,2.43245e-05,1 GT:PL 0/1:54,0,197
Scaffold_1 633855 . G T 24.0241 PASS DP=13;VDB=0.138245;SGB=-0.556411;RPB=0.125315;MQB=0.0249144;MQSB=0.0584657;BQB=0.697274;MQ0F=0.0769231;AF1=0.499999;AC1=1;DP4=1,7,4,0;MQ=52;FQ=27.0236;PV4=0.010101,0.307492,0.000136442,0.196324 GT:PL 0/1:54,0,182
Scaffold_1 633868 . T C 43.0073 PASS DP=15;VDB=0.377852;SGB=-0.616816;RPB=0.399156;MQB=0.00632972;MQSB=0.0521764;BQB=0.150977;MQ0F=0.0666667;AF1=0.5;AC1=1;DP4=2,7,6,0;MQ=51;FQ=46.0153;PV4=0.00699301,0.0106027,0.000275042,1 GT:PL 0/1:73,0,206
Scaffold_1 633895 . G A 60.0073 PASS DP=14;VDB=0.377852;SGB=-0.616816;RPB=0.547669;MQB=0.00822975;MQSB=0.0672055;BQB=0.875173;MQ0F=0.0714286;AF1=0.5;AC1=1;DP4=2,6,6,0;MQ=51;FQ=63.0154;PV4=0.00965701,1,0.000552282,1 GT:PL 0/1:90,0,183
Scaffold_1 633912 . G A 48.0072 PASS DP=10;VDB=0.27062;SGB=-0.556411;RPB=0.89338;MQB=0.0812164;MQSB=0.162433;BQB=0.974597;MQ0F=0.1;AF1=0.5;AC1=1;DP4=1,4,4,0;MQ=52;FQ=51.0153;PV4=0.047619,0.439308,0.0248556,1 GT:PL 0/1:78,0,142
Scaffold_1 633944 . G A 57.0073 PASS DP=11;VDB=0.618918;SGB=-0.590765;RPB=0.891517;MQB=0.950952;MQSB=0.222222;BQB=0.950952;MQ0F=0.272727;AF1=0.5;AC1=1;DP4=4,2,5,0;MQ=42;FQ=59.6015;PV4=0.454545,1,1,0.282086 GT:PL 0/1:87,0,97
Scaffold_1 633994 . G A 87.0077 PASS DP=9;VDB=0.682725;SGB=-0.616816;RPB=0.25;MQB=0.916667;MQSB=1;BQB=0.25;MQ0F=0.111111;AF1=0.500008;AC1=1;DP4=2,0,5,1;MQ=43;FQ=18.0829;PV4=1,0.0320856,1,0.295252 GT:PL 0/1:117,0,45
Scaffold_1 633995 . C T 77.0075 PASS DP=9;VDB=0.771524;SGB=-0.590765;RPB=0.2;MQB=0.9;BQB=0.3;MQ0F=0.111111;AF1=0.500005;AC1=1;DP4=2,0,5,0;MQ=46;FQ=20.058;PV4=1,0.043624,1,0.405569 GT:PL 0/1:107,0,47
Scaffold_1 634032 . A G 65.0073 PASS DP=10;VDB=0.247382;SGB=-0.616816;RPB=0.111973;MQB=0.111973;MQSB=0.783809;BQB=0.895781;MQ0F=0.1;AF1=0.5;AC1=1;DP4=1,3,5,1;MQ=47;FQ=67.9882;PV4=0.190476,0.223407,0.0166367,1 GT:PL 0/1:95,0,117
Scaffold_1 634072 . G A 71.0074 PASS DP=10;VDB=0.226058;SGB=-0.616816;RPB=0.503877;MQB=0.111973;MQSB=0.783809;BQB=0.895781;MQ0F=0.1;AF1=0.5;AC1=1;DP4=1,3,5,1;MQ=49;FQ=73.9078;PV4=0.190476,0.223407,0.0202543,0.223407 GT:PL 0/1:101,0,117
Scaffold_1 634081 . G A 61.0073 PASS DP=10;VDB=0.145712;SGB=-0.590765;RPB=0.649731;MQB=0.0812164;MQSB=0.649731;BQB=0.89338;MQ0F=0.1;AF1=0.5;AC1=1;DP4=1,3,4,1;MQ=47;FQ=64.01;PV4=0.206349,0.203542,0.00631383,1 GT:PL 0/1:91,0,120
Scaffold_1 634088 . G T 77.0075 PASS DP=11;VDB=0.670308;SGB=-0.616816;RPB=0.742931;MQB=0.0297172;MQSB=0.475476;BQB=0.564628;MQ0F=0.0909091;AF1=0.5;AC1=1;DP4=1,4,5,1;MQ=48;FQ=79.8804;PV4=0.0800866,1,0.00161367,1 GT:PL 0/1:107,0,122
Scaffold_1 634096 . G A 70.0074 PASS DP=11;VDB=0.670308;SGB=-0.616816;RPB=0.742931;MQB=0.0297172;MQSB=0.475476;BQB=0.891517;MQ0F=0.0909091;AF1=0.5;AC1=1;DP4=1,4,5,1;MQ=48;FQ=73.0134;PV4=0.0800866,0.260886,0.00161367,0.250369 GT:PL 0/1:100,0,133
Scaffold_1 634123 . T C 48.0072 PASS DP=10;VDB=0.877481;SGB=-0.590765;RPB=0.952347;MQB=0.0476173;MQSB=0.952347;BQB=0.952347;MQ0F=0.1;AF1=0.5;AC1=1;DP4=2,3,3,2;MQ=48;FQ=51.0153;PV4=1,0.31269,0.00235542,0.0343645 GT:PL 0/1:78,0,148
Scaffold_1 634136 . A T 20.0499 PASS DP=8;VDB=0.431015;SGB=-0.511536;RPB=0.450401;MQB=0.150134;MQSB=0.868321;BQB=0.900802;MQ0F=0;AF1=0.499997;AC1=1;DP4=2,3,2,1;MQ=51;FQ=23.0366;PV4=1,1,0.00154886,1 GT:PL 0/1:50,0,157
Scaffold_1 634137 . C T 20.0499 PASS DP=8;VDB=0.411594;SGB=-0.511536;RPB=0.450401;MQB=0.150134;MQSB=0.868321;BQB=0.900802;MQ0F=0;AF1=0.499997;AC1=1;DP4=2,3,2,1;MQ=51;FQ=23.0366;PV4=1,1,0.00154886,1 GT:PL 0/1:50,0,157
Scaffold_1 634138 . A G 20.0499 PASS DP=9;VDB=0.421281;SGB=-0.511536;RPB=0.450401;MQB=0.150134;MQSB=0.868321;BQB=0.900802;MQ0F=0;AF1=0.499997;AC1=1;DP4=2,3,2,1;MQ=51;FQ=23.0366;PV4=1,1,0.00154886,1 GT:PL 0/1:50,0,153
Scaffold_1 634191 . T G 39.0076 PASS DP=14;VDB=0.311141;SGB=-0.616816;RPB=0.927743;MQB=0.00822975;MQSB=0.278037;BQB=0.811936;MQ0F=0;AF1=0.5;AC1=1;DP4=7,1,2,4;MQ=48;FQ=42.0155;PV4=0.0909091,1,3.34241e-06,0.471158 GT:PL 0/1:69,0,177
Scaffold_1 634220 . T C 66.0074 PASS DP=16;VDB=0.410943;SGB=-0.636426;RPB=0.993326;MQB=0.00524752;MQSB=0.23222;BQB=0.87319;MQ0F=0;AF1=0.5;AC1=1;DP4=7,1,2,5;MQ=48;FQ=69.0155;PV4=0.0405594,0.236905,7.63426e-06,0.426325 GT:PL 0/1:96,0,179
Scaffold_1 634234 . G A 46.0072 PASS DP=14;VDB=0.469001;SGB=-0.616816;RPB=0.967216;MQB=0.035674;MQSB=0.0672055;BQB=0.94925;MQ0F=0;AF1=0.5;AC1=1;DP4=7,1,1,5;MQ=47;FQ=49.0153;PV4=0.025641,0.287397,0.00585008,1 GT:PL 0/1:76,0,149
Scaffold_1 634235 . G A 30.0112 PASS DP=14;VDB=0.409395;SGB=-0.590765;RPB=0.958048;MQB=0.0452104;MQSB=0.0897512;BQB=0.997325;MQ0F=0;AF1=0.5;AC1=1;DP4=7,1,1,4;MQ=47;FQ=33.0172;PV4=0.031857,0.467694,0.00524751,1 GT:PL 0/1:60,0,152
Scaffold_1 634263 . C A 76.0075 PASS DP=14;VDB=0.286294;SGB=-0.636426;RPB=0.623736;MQB=0.0102252;MQSB=0.112477;BQB=0.920266;MQ0F=0;AF1=0.5;AC1=1;DP4=6,0,1,6;MQ=47;FQ=79.0019;PV4=0.004662,0.323117,0.000227271,1 GT:PL 0/1:106,0,131
Scaffold_1 634272 . T C 65.0073 PASS DP=15;VDB=0.286294;SGB=-0.636426;RPB=0.885987;MQB=0.00571605;MQSB=0.194346;BQB=0.948864;MQ0F=0;AF1=0.5;AC1=1;DP4=6,1,1,6;MQ=48;FQ=68.0155;PV4=0.0291375,0.205163,8.651e-05,1 GT:PL 0/1:95,0,165
Scaffold_1 634275 . T G 68.0074 PASS DP=15;VDB=0.547491;SGB=-0.651104;RPB=0.785785;MQB=0.00524752;MQSB=0.144386;BQB=0.581345;MQ0F=0;AF1=0.5;AC1=1;DP4=6,1,1,7;MQ=47;FQ=71.0155;PV4=0.010101,0.0576989,5.39838e-05,0.434913 GT:PL 0/1:98,0,163
Scaffold_1 634281 . G A 82.0076 PASS DP=15;VDB=0.568173;SGB=-0.636426;RPB=0.785785;MQB=0.039122;MQSB=0.144386;BQB=0.985046;MQ0F=0;AF1=0.5;AC1=1;DP4=6,2,1,6;MQ=47;FQ=85.0157;PV4=0.0405594,0.339178,0.0106164,0.421936 GT:PL 0/1:112,0,168
Scaffold_1 634291 . C T 65.0073 PASS DP=19;VDB=0.565216;SGB=-0.616816;RPB=0.64118;MQB=0.105399;MQSB=0.269146;BQB=0.745722;MQ0F=0;AF1=0.5;AC1=1;DP4=7,2,1,5;MQ=51;FQ=68.0155;PV4=0.0405594,0.193074,0.0440353,1 GT:PL 0/1:95,0,185
Scaffold_1 634329 . G T 133.008 PASS DP=15;VDB=0.879559;SGB=-0.662043;RPB=0.676634;MQB=0.0183156;MQSB=0.829029;BQB=0.711573;MQ0F=0;AF1=0.5;AC1=1;DP4=3,3,2,7;MQ=49;FQ=131.252;PV4=0.328671,0.0873905,0.00174597,1 GT:PL 0/1:163,0,160
Scaffold_1 634343 . C T 142.008 PASS DP=13;VDB=0.668412;SGB=-0.651104;RPB=0.397295;MQB=0.0591947;MQSB=0.382304;BQB=0.98568;MQ0F=0;AF1=0.5;AC1=1;DP4=2,2,1,7;MQ=49;FQ=77.0156;PV4=0.236364,1,0.00092441,0.244957 GT:PL 0/1:172,0,104
Scaffold_1 634436 . T A 14.176 PASS DP=12;VDB=0.93184;SGB=-0.511536;RPB=0.979382;MQB=0.0497871;MQSB=0.562708;BQB=0.954207;MQ0F=0;AF1=0.49999;AC1=1;DP4=4,4,0,3;MQ=54;FQ=17.1004;PV4=0.236364,1,0.000217199,1 GT:PL 0/1:44,0,205
Scaffold_1 634439 . T C 16.1143 PASS DP=11;VDB=0.93184;SGB=-0.511536;RPB=0.824834;MQB=0.0916482;MQSB=0.503877;BQB=0.916482;MQ0F=0;AF1=0.499994;AC1=1;DP4=4,3,0,3;MQ=53;FQ=19.069;PV4=0.2,1,0.000531351,1 GT:PL 0/1:46,0,185
Scaffold_1 634496 . C A 24.0241 PASS DP=15;VDB=0.281254;SGB=-0.556411;RPB=0.367879;MQB=0.105399;MQSB=0.428703;BQB=0.977751;MQ0F=0;AF1=0.499999;AC1=1;DP4=7,3,0,4;MQ=55;FQ=27.0236;PV4=0.0699301,1,0.000889607,0.409932 GT:PL 0/1:54,0,216
Scaffold_1 635203 . T C 22.0341 PASS DP=8;VDB=0.02;SGB=-0.453602;RPB=0.333333;MQB=0;MQSB=0.5;BQB=0.666667;MQ0F=0;AF1=0.499998;AC1=1;DP4=4,2,2,0;MQ=56;FQ=25.0286;PV4=1,1,0.0118125,1 GT:PL 0/1:52,0,170
Scaffold_1 635223 . C A 19.061 PASS DP=9;VDB=0.02;SGB=-0.453602;RPB=0.571429;MQB=0;MQSB=0.809011;BQB=0.714286;MQ0F=0;AF1=0.499997;AC1=1;DP4=4,3,2,0;MQ=55;FQ=22.0421;PV4=0.5,1,0.0147753,1 GT:PL 0/1:49,0,200
Scaffold_1 635256 . A G 33.0091 PASS DP=10;VDB=0.02;SGB=-0.453602;RPB=1;MQB=0;MQSB=0.600535;BQB=0;MQ0F=0;AF1=0.5;AC1=1;DP4=3,3,2,0;MQ=55;FQ=36.0162;PV4=0.464286,1,0.0252578,1 GT:PL 0/1:63,0,171
Scaffold_1 635262 . C A 36.0081 PASS DP=10;VDB=0.02;SGB=-0.453602;RPB=0.8;MQB=0;MQSB=0.6;BQB=0;MQ0F=0;AF1=0.5;AC1=1;DP4=3,2,2,0;MQ=54;FQ=39.0157;PV4=1,1,0.0434187,1 GT:PL 0/1:66,0,155
Scaffold_1 635295 . G A 16.1143 PASS DP=10;VDB=0.02;SGB=-0.453602;RPB=0.5;MQB=0;MQSB=0.111973;BQB=0.625;MQ0F=0;AF1=0.499994;AC1=1;DP4=6,2,0,2;MQ=55;FQ=19.069;PV4=0.133333,1,0.00593541,1 GT:PL 0/1:46,0,198
Scaffold_1 635309 . A G 13.2188 PASS DP=11;VDB=0.02;SGB=-0.453602;RPB=0.444444;MQB=0;MQSB=0.0803868;BQB=0.666667;MQ0F=0;AF1=0.499987;AC1=1;DP4=7,2,0,2;MQ=56;FQ=16.1222;PV4=0.109091,1,0.00340659,1 GT:PL 0/1:43,0,195
Scaffold_1 635352 . C T 10.42 PASS DP=13;VDB=0.02;SGB=-0.453602;RPB=0.222222;MQB=0;MQSB=0.200967;BQB=0.888889;MQ0F=0;AF1=0.499975;AC1=1;DP4=7,2,0,2;MQ=57;FQ=13.2265;PV4=0.109091,1,4.57604e-05,1 GT:PL 0/1:40,0,203
Scaffold_1 635677 . C T 20.0499 PASS DP=13;VDB=0.0625499;SGB=-0.556411;RPB=0.94394;MQB=0.0249144;MQSB=0.540433;BQB=0.793923;MQ0F=0;AF1=0.499997;AC1=1;DP4=5,3,4,0;MQ=52;FQ=23.0366;PV4=0.490909,1,2.4567e-05,1 GT:PL 0/1:50,0,207
Scaffold_1 635869 . C T 41.0074 PASS DP=12;VDB=0.281254;SGB=-0.556411;RPB=0.913799;MQB=0.125315;MQSB=0.372712;BQB=0.94394;MQ0F=0;AF1=0.5;AC1=1;DP4=5,3,1,3;MQ=54;FQ=44.0154;PV4=0.545455,1,0.00257024,1 GT:PL 0/1:71,0,210
Scaffold_1 636911 . A T 84.0076 PASS DP=23;VDB=0.00506968;SGB=-0.590765;RPB=0.311403;MQB=0.909156;MQSB=0.651439;BQB=0.551431;MQ0F=0;AF1=0.5;AC1=1;DP4=8,7,4,1;MQ=58;FQ=87.0157;PV4=0.602683,1,1,1 GT:PL 0/1:114,0,255
Scaffold_1 636959 . A C 173.009 PASS DP=22;VDB=0.000658567;SGB=-0.676189;RPB=0.551198;MQB=0.370932;MQSB=0.93882;BQB=0.900548;MQ0F=0;AF1=0.5;AC1=1;DP4=4,6,8,3;MQ=56;FQ=176.008;PV4=0.198381,0.214311,0.0273702,1 GT:PL 0/1:203,0,230
Scaffold_1 636968 . C A 76.0075 PASS DP=23;VDB=0.00444448;SGB=-0.590765;RPB=1;MQB=0.711124;MQSB=0.977529;BQB=0.946915;MQ0F=0;AF1=0.5;AC1=1;DP4=8,8,4,1;MQ=55;FQ=79.0156;PV4=0.338346,1,1,1 GT:PL 0/1:106,0,255
Scaffold_1 636978 . G C 37.0079 PASS DP=24;VDB=0.00444448;SGB=-0.590765;RPB=0.981001;MQB=0.73572;MQSB=0.991342;BQB=0.0133551;MQ0F=0;AF1=0.5;AC1=1;DP4=8,9,4,1;MQ=56;FQ=40.0156;PV4=0.323308,0.000339294,1,1 GT:PL 0/1:67,0,255
Scaffold_1 637002 . G A 70.0074 PASS DP=24;VDB=0.232635;SGB=-0.636426;RPB=0.995472;MQB=0.0261774;MQSB=0.954207;BQB=0.987474;MQ0F=0;AF1=0.5;AC1=1;DP4=11,6,5,2;MQ=56;FQ=73.0156;PV4=1,0.312794,1.93594e-05,1 GT:PL 0/1:100,0,255
Scaffold_1 637014 . C T 81.0075 PASS DP=27;VDB=0.0149992;SGB=-0.556411;RPB=0.270368;MQB=0.593488;MQSB=0.997519;BQB=0.103883;MQ0F=0;AF1=0.5;AC1=1;DP4=12,6,3,1;MQ=54;FQ=84.0157;PV4=1,1,1,1 GT:PL 0/1:111,0,255
Scaffold_1 637018 . C G 108.008 PASS DP=27;VDB=0.00474791;SGB=-0.590765;RPB=0.0390978;MQB=0.73572;MQSB=0.993905;BQB=0.369955;MQ0F=0;AF1=0.5;AC1=1;DP4=12,5,4,1;MQ=55;FQ=111.016;PV4=1,1,1,1 GT:PL 0/1:138,0,255
Scaffold_1 637045 . A T 22.0341 PASS DP=22;VDB=0.865924;SGB=-0.556411;RPB=0.762744;MQB=0.397295;MQSB=0.91051;BQB=0.526752;MQ0F=0.0454545;AF1=0.499998;AC1=1;DP4=5,8,4,0;MQ=56;FQ=25.0286;PV4=0.0823529,1,0.00359574,0.276803 GT:PL 0/1:52,0,255
Scaffold_1 637046 . T A 30.0112 PASS DP=22;VDB=0.851686;SGB=-0.556411;RPB=0.793923;MQB=1;MQSB=0.743567;BQB=0.823732;MQ0F=0.0454545;AF1=0.5;AC1=1;DP4=9,4,0,4;MQ=56;FQ=33.0172;PV4=0.0294118,0.0714781,1,1 GT:PL 0/1:60,0,247
Scaffold_1 637056 . T G 36.0081 PASS DP=18;VDB=0.0729503;SGB=-0.556411;RPB=0.604728;MQB=0.898397;MQSB=0.0762218;BQB=0.97357;MQ0F=0.0555556;AF1=0.5;AC1=1;DP4=4,5,1,3;MQ=50;FQ=39.0157;PV4=1,1,0.32692,1 GT:PL 0/1:66,0,193
Scaffold_1 637061 . G A 32.0097 PASS DP=17;VDB=0.0686416;SGB=-0.556411;RPB=0.346864;MQB=0.624635;MQSB=0.607926;BQB=0.800574;MQ0F=0.0588235;AF1=0.5;AC1=1;DP4=7,5,1,3;MQ=54;FQ=35.0165;PV4=0.569231,1,0.164173,1 GT:PL 0/1:62,0,239
Scaffold_1 637072 . T A 37.0079 PASS DP=17;VDB=0.0707707;SGB=-0.556411;RPB=0.426445;MQB=0.808101;MQSB=0.244651;BQB=0.188162;MQ0F=0.0588235;AF1=0.5;AC1=1;DP4=6,5,1,3;MQ=52;FQ=40.0156;PV4=0.569231,1,0.251863,1 GT:PL 0/1:67,0,209
Scaffold_1 637098 . C A 51.0072 PASS DP=17;VDB=0.304345;SGB=-0.590765;RPB=0.762523;MQB=0.697005;MQSB=0.844114;BQB=0.993603;MQ0F=0.0588235;AF1=0.5;AC1=1;DP4=6,5,1,4;MQ=51;FQ=54.0154;PV4=0.307692,1,0.194388,1 GT:PL 0/1:81,0,209
Scaffold_1 637101 . G A 22.0341 PASS DP=17;VDB=0.931778;SGB=-0.556411;RPB=0.872525;MQB=0.146957;MQSB=0.676634;BQB=0.356561;MQ0F=0.0588235;AF1=0.499998;AC1=1;DP4=4,7,2,2;MQ=51;FQ=25.0286;PV4=1,0.0707827,0.0660166,0.00766357 GT:PL 0/1:52,0,226
Scaffold_1 637108 . T G 32.0097 PASS DP=17;VDB=0.931778;SGB=-0.556411;RPB=0.793923;MQB=0.0988549;MQSB=0.944865;BQB=0.526752;MQ0F=0.0588235;AF1=0.5;AC1=1;DP4=6,7,2,2;MQ=52;FQ=35.0165;PV4=1,1,0.0405732,0.0186575 GT:PL 0/1:62,0,255
Scaffold_1 637111 . C T 119.008 PASS DP=17;VDB=0.618905;SGB=-0.662043;RPB=0.352866;MQB=0.026526;MQSB=0.944865;BQB=0.600245;MQ0F=0.0588235;AF1=0.5;AC1=1;DP4=5,3,3,6;MQ=52;FQ=122.009;PV4=0.346935,1,0.00556339,0.324617 GT:PL 0/1:149,0,177
Scaffold_1 637120 . C T 17.0924 PASS DP=16;VDB=0.663511;SGB=-0.511536;RPB=0.252182;MQB=0.22313;MQSB=0.99308;BQB=0.729713;MQ0F=0.0625;AF1=0.499995;AC1=1;DP4=5,7,1,2;MQ=53;FQ=20.058;PV4=1,1,0.139168,1 GT:PL 0/1:47,0,228
Scaffold_1 637122 . T A 109.008 PASS DP=16;VDB=0.461975;SGB=-0.651104;RPB=0.136585;MQB=0.0417327;MQSB=0.994413;BQB=0.422455;MQ0F=0.0625;AF1=0.5;AC1=1;DP4=5,3,2,6;MQ=53;FQ=112.002;PV4=0.314685,1,0.0111157,1 GT:PL 0/1:139,0,164
Scaffold_1 637125 . T G 117.008 PASS DP=15;VDB=0.461975;SGB=-0.651104;RPB=0.221641;MQB=0.0521764;MQSB=0.97357;BQB=0.101079;MQ0F=0.0666667;AF1=0.5;AC1=1;DP4=5,2,2,6;MQ=53;FQ=113.043;PV4=0.131935,1,0.0162642,1 GT:PL 0/1:147,0,141
Scaffold_1 637141 . T G 23.0285 PASS DP=16;VDB=0.663511;SGB=-0.511536;RPB=0.2628;MQB=0.2628;MQSB=0.925999;BQB=0.646383;MQ0F=0.0625;AF1=0.499999;AC1=1;DP4=6,5,1,2;MQ=52;FQ=26.0258;PV4=1,1,0.162222,1 GT:PL 0/1:53,0,248
Scaffold_1 637159 . T C 28.0137 PASS DP=9;VDB=0.18;SGB=-0.453602;RPB=0.5;MQB=0;MQSB=1;BQB=1;MQ0F=0.111111;AF1=0.5;AC1=1;DP4=1,3,0,2;MQ=57;FQ=31.0185;PV4=1,1,0.0178057,1 GT:PL 0/1:58,0,121
Scaffold_1 637161 . T C 31.0104 PASS DP=9;VDB=0.18;SGB=-0.453602;RPB=0;MQB=0;MQSB=1;BQB=0.666667;MQ0F=0.111111;AF1=0.5;AC1=1;DP4=1,2,0,2;MQ=56;FQ=34.0168;PV4=1,0.247513,0.0415595,1 GT:PL 0/1:61,0,120
Scaffold_1 637175 . G A 23.0285 PASS DP=9;VDB=0.779245;SGB=-0.511536;RPB=0.577865;MQB=0.577865;MQSB=1;BQB=0.462292;MQ0F=0.111111;AF1=0.499999;AC1=1;DP4=1,5,0,3;MQ=48;FQ=26.0258;PV4=1,1,0.249854,1 GT:PL 0/1:53,0,121
Scaffold_1 637207 . C T 49.0072 PASS DP=10;VDB=0.885471;SGB=-0.556411;RPB=0.559863;MQB=0.167959;MQSB=1;BQB=0.503877;MQ0F=0;AF1=0.5;AC1=1;DP4=1,5,0,4;MQ=51;FQ=52.0153;PV4=1,1,0.031928,1 GT:PL 0/1:79,0,138
Scaffold_1 637214 . G C 43.0073 PASS DP=13;VDB=0.863154;SGB=-0.590765;RPB=0.0643861;MQB=0.0137638;MQSB=1;BQB=0.0897512;MQ0F=0;AF1=0.5;AC1=1;DP4=1,7,0,5;MQ=53;FQ=46.0153;PV4=1,1,0.00251682,1 GT:PL 0/1:73,0,166
Scaffold_1 637228 . G A 12.272 PASS DP=13;VDB=0.748679;SGB=-0.511536;RPB=0.400803;MQB=0.0740088;MQSB=1;BQB=0.879351;MQ0F=0;AF1=0.499984;AC1=1;DP4=1,9,0,3;MQ=55;FQ=15.1496;PV4=1,1,0.0058845,1 GT:PL 0/1:42,0,199
Scaffold_1 641319 . G T 36.0094 PASS DP=3;VDB=0.02;SGB=-0.453602;RPB=1;MQB=1;BQB=1;MQ0F=0;AF1=0.500158;AC1=1;DP4=0,1,0,2;MQ=60;FQ=6.20321;PV4=1,1,1,1 GT:PL 0/1:66,0,32
Scaffold_1 650703 . C A 22.0341 PASS DP=8;VDB=0.48;SGB=-0.453602;RPB=0.833333;MQB=1;MQSB=0.900802;BQB=0.833333;MQ0F=0;AF1=0.499998;AC1=1;DP4=3,3,0,2;MQ=60;FQ=25.0286;PV4=0.464286,1,1,1 GT:PL 0/1:52,0,178
Scaffold_1 658337 . G C 12.272 PASS DP=8;VDB=0.02;SGB=-0.453602;RPB=1;MQB=1;MQSB=1;BQB=0.125;MQ0F=0;AF1=0.499984;AC1=1;DP4=1,3,0,2;MQ=60;FQ=15.1496;PV4=1,0.0394144,1,1 GT:PL 0/1:42,0,124
Scaffold_1 673010 . G A 86.7651 PASS DP=9;VDB=0.749879;SGB=-0.616816;RPB=0.924584;MQB=0.115573;MQSB=0.571429;BQB=0.809011;MQ0F=0.222222;AF1=1;AC1=2;DP4=2,1,5,1;MQ=27;FQ=-32.988;PV4=1,0.157945,1,0.29743 GT:PL 1/1:118,6,0
Scaffold_1 675111 . T C 13.2188 PASS DP=11;VDB=0.02;SGB=-0.453602;RPB=0.666667;MQB=1;MQSB=1;BQB=0.333333;MQ0F=0;AF1=0.499987;AC1=1;DP4=2,7,0,2;MQ=60;FQ=16.1222;PV4=1,1,1,1 GT:PL 0/1:43,0,192
Scaffold_1 675415 . C A 31.0104 PASS DP=6;VDB=0.02;SGB=-0.453602;RPB=0.666667;MQB=1;MQSB=1;BQB=1;MQ0F=0;AF1=0.5;AC1=1;DP4=2,1,2,0;MQ=60;FQ=34.0164;PV4=1,1,1,1 GT:PL 0/1:61,0,101
Scaffold_1 680463 . C G 16.1143 PASS DP=10;VDB=0.18;SGB=-0.453602;RPB=0.285714;MQB=1;MQSB=1;BQB=0.928571;MQ0F=0;AF1=0.499994;AC1=1;DP4=5,2,2,0;MQ=60;FQ=19.069;PV4=1,1,1,1 GT:PL 0/1:46,0,171
Scaffold_1 680482 . A G 76.0075 PASS DP=8;VDB=0.131345;SGB=-0.556411;RPB=0.248092;MQB=0.992367;MQSB=1;BQB=0.62023;MQ0F=0;AF1=0.5;AC1=1;DP4=2,2,4,0;MQ=60;FQ=78.8461;PV4=0.428571,1,1,0.0717066 GT:PL 0/1:106,0,120
Scaffold_1 680485 . G A 54.0072 PASS DP=8;VDB=0.160333;SGB=-0.511536;RPB=0.202566;MQB=1.01283;MQSB=1;BQB=0.607698;MQ0F=0;AF1=0.5;AC1=1;DP4=2,2,3,0;MQ=60;FQ=57.014;PV4=0.428571,1,1,0.0377433 GT:PL 0/1:84,0,119
Scaffold_1 680498 . A C 68.0074 PASS DP=9;VDB=0.0896691;SGB=-0.556411;RPB=0.992367;MQB=0.992367;MQSB=1;BQB=0.992367;MQ0F=0;AF1=0.5;AC1=1;DP4=3,1,4,0;MQ=60;FQ=70.9812;PV4=1,0.258928,1,1 GT:PL 0/1:98,0,119
Scaffold_1 680507 . C A 46.0072 PASS DP=10;VDB=0.116687;SGB=-0.511536;RPB=0.924584;MQB=0.924584;MQSB=1;BQB=0.924584;MQ0F=0;AF1=0.5;AC1=1;DP4=4,2,3,0;MQ=60;FQ=49.0153;PV4=0.5,0.313142,1,1 GT:PL 0/1:76,0,174
Scaffold_1 680513 . C G 83.0076 PASS DP=11;VDB=0.22001;SGB=-0.590765;RPB=0.950952;MQB=0.950952;MQSB=1;BQB=0.891517;MQ0F=0;AF1=0.5;AC1=1;DP4=4,2,5,0;MQ=60;FQ=86.0152;PV4=0.454545,1,1,0.457757 GT:PL 0/1:113,0,152
Scaffold_1 680542 . G A 41.0074 PASS DP=9;VDB=0.0560361;SGB=-0.511536;RPB=0.607698;MQB=1.01283;MQSB=1;BQB=0.405132;MQ0F=0;AF1=0.5;AC1=1;DP4=3,1,3,0;MQ=60;FQ=44.0154;PV4=1,0.0727953,1,1 GT:PL 0/1:71,0,124
Scaffold_1 680573 . G A 99.0078 PASS DP=14;VDB=0.0041585;SGB=-0.590765;RPB=0.646905;MQB=1;MQSB=1;BQB=0.99115;MQ0F=0;AF1=0.5;AC1=1;DP4=5,4,3,2;MQ=60;FQ=102.016;PV4=1,1,1,1 GT:PL 0/1:129,0,220
Scaffold_1 680584 . G A 101.008 PASS DP=15;VDB=0.00791855;SGB=-0.590765;RPB=0.99115;MQB=1;MQSB=1;BQB=0.83527;MQ0F=0;AF1=0.5;AC1=1;DP4=5,4,3,2;MQ=60;FQ=104.016;PV4=1,0.166961,1,1 GT:PL 0/1:131,0,238
Scaffold_1 680591 . A C 117.008 PASS DP=15;VDB=0.0131987;SGB=-0.590765;RPB=0.945959;MQB=1;MQSB=1;BQB=0.726149;MQ0F=0;AF1=0.5;AC1=1;DP4=5,4,3,2;MQ=60;FQ=120.016;PV4=1,1,1,1 GT:PL 0/1:147,0,221
Scaffold_1 680616 . A G 138.008 PASS DP=18;VDB=0.252876;SGB=-0.616816;RPB=0.633936;MQB=1;MQSB=1;BQB=0.694267;MQ0F=0;AF1=0.5;AC1=1;DP4=6,5,4,2;MQ=60;FQ=141.016;PV4=1,1,1,0.47667 GT:PL 0/1:168,0,250
Scaffold_1 680634 . G A 95.0077 PASS DP=18;VDB=0.413797;SGB=-0.590765;RPB=0.762523;MQB=1;MQSB=1;BQB=0.730199;MQ0F=0;AF1=0.5;AC1=1;DP4=6,5,4,1;MQ=60;FQ=98.0159;PV4=0.587912,1,1,1 GT:PL 0/1:125,0,255
Scaffold_1 680636 . G A 124.008 PASS DP=19;VDB=0.625428;SGB=-0.616816;RPB=0.994962;MQB=1;MQSB=1;BQB=0.542747;MQ0F=0;AF1=0.5;AC1=1;DP4=6,5,4,2;MQ=60;FQ=127.016;PV4=1,0.408517,1,0.379675 GT:PL 0/1:154,0,255
Scaffold_1 680638 . C T 116.008 PASS DP=19;VDB=0.651328;SGB=-0.616816;RPB=0.994962;MQB=1;MQSB=1;BQB=0.25284;MQ0F=0;AF1=0.5;AC1=1;DP4=6,5,4,2;MQ=60;FQ=119.016;PV4=1,0.397019,1,0.395761 GT:PL 0/1:146,0,255
Scaffold_1 680657 . A C 129.008 PASS DP=22;VDB=0.919254;SGB=-0.616816;RPB=0.588192;MQB=1;MQSB=1;BQB=0.875749;MQ0F=0;AF1=0.5;AC1=1;DP4=8,4,3,3;MQ=60;FQ=132.016;PV4=0.626697,1,1,0.0915183 GT:PL 0/1:159,0,255
Scaffold_1 680661 . C T 108.008 PASS DP=22;VDB=0.551573;SGB=-0.616816;RPB=0.879827;MQB=1;MQSB=1;BQB=0.80337;MQ0F=0;AF1=0.5;AC1=1;DP4=8,7,2,4;MQ=60;FQ=111.016;PV4=0.635117,0.297135,1,0.147681 GT:PL 0/1:138,0,255
Scaffold_1 680683 . C T 97.0078 PASS DP=22;VDB=0.394382;SGB=-0.616816;RPB=0.906807;MQB=1;MQSB=1;BQB=0.934321;MQ0F=0;AF1=0.5;AC1=1;DP4=8,8,2,4;MQ=60;FQ=100.016;PV4=0.646174,0.270613,1,0.270613 GT:PL 0/1:127,0,255
Scaffold_1 680704 . C T 66.0074 PASS DP=21;VDB=0.670308;SGB=-0.616816;RPB=0.307929;MQB=1;MQSB=1;BQB=0.470553;MQ0F=0;AF1=0.5;AC1=1;DP4=7,6,0,6;MQ=60;FQ=69.0155;PV4=0.0436017,0.0353269,1,0.096995 GT:PL 0/1:96,0,255
Scaffold_1 680705 . G A 70.0074 PASS DP=21;VDB=0.353391;SGB=-0.590765;RPB=0.983003;MQB=1;MQSB=1;BQB=0.539484;MQ0F=0;AF1=0.5;AC1=1;DP4=7,7,1,4;MQ=60;FQ=73.0156;PV4=0.337805,0.0311633,1,1 GT:PL 0/1:100,0,255
Scaffold_1 680718 . C T 54.0072 PASS DP=22;VDB=0.127985;SGB=-0.556411;RPB=0.397295;MQB=1;MQSB=1;BQB=0.960728;MQ0F=0;AF1=0.5;AC1=1;DP4=7,6,1,3;MQ=60;FQ=57.0154;PV4=0.576471,0.346475,1,1 GT:PL 0/1:84,0,255
Scaffold_1 680751 . T C 55.0072 PASS DP=18;VDB=0.0896691;SGB=-0.556411;RPB=0.826565;MQB=1;MQSB=1;BQB=0.826565;MQ0F=0;AF1=0.5;AC1=1;DP4=4,5,0,4;MQ=60;FQ=58.0154;PV4=0.227972,1,1,1 GT:PL 0/1:85,0,212
Scaffold_1 680753 . C T 44.0073 PASS DP=18;VDB=0.0797974;SGB=-0.556411;RPB=0.658617;MQB=1;MQSB=1;BQB=0.997872;MQ0F=0;AF1=0.5;AC1=1;DP4=6,5,0,4;MQ=60;FQ=47.0153;PV4=0.103297,0.418736,1,1 GT:PL 0/1:74,0,240
Scaffold_1 680754 . T G 47.0072 PASS DP=18;VDB=0.0846253;SGB=-0.556411;RPB=0.624635;MQB=1;MQSB=1;BQB=0.479364;MQ0F=0;AF1=0.5;AC1=1;DP4=7,5,0,4;MQ=60;FQ=50.0153;PV4=0.0884615,1,1,1 GT:PL 0/1:77,0,224
Scaffold_1 680762 . C G 77.0075 PASS DP=16;VDB=0.12166;SGB=-0.616816;RPB=0.490777;MQB=0.555306;MQSB=0.809155;BQB=0.65377;MQ0F=0;AF1=0.5;AC1=1;DP4=6,4,0,6;MQ=57;FQ=80.0157;PV4=0.0338412,1,0.0298231,0.225929 GT:PL 0/1:107,0,219
Scaffold_1 680765 . G A 63.0073 PASS DP=16;VDB=0.233642;SGB=-0.590765;RPB=0.581657;MQB=0.829029;MQSB=0.939413;BQB=0.954207;MQ0F=0;AF1=0.5;AC1=1;DP4=6,4,0,5;MQ=58;FQ=66.0155;PV4=0.043956,1,0.0824117,1 GT:PL 0/1:93,0,239
Scaffold_1 680777 . G A 63.0073 PASS DP=18;VDB=0.114666;SGB=-0.590765;RPB=0.89683;MQB=0.83527;MQSB=0.945959;BQB=0.923116;MQ0F=0;AF1=0.5;AC1=1;DP4=5,4,0,5;MQ=58;FQ=66.0155;PV4=0.0859141,1,0.0950757,1 GT:PL 0/1:93,0,218
Scaffold_1 680790 . T C 50.0072 PASS DP=15;VDB=0.0625499;SGB=-0.556411;RPB=0.988166;MQB=0.785785;MQSB=0.899815;BQB=0.304076;MQ0F=0;AF1=0.5;AC1=1;DP4=6,3,0,4;MQ=58;FQ=53.0153;PV4=0.0699301,1,0.069705,1 GT:PL 0/1:80,0,203
Scaffold_1 680792 . T C 55.0072 PASS DP=11;VDB=0.0550934;SGB=-0.556411;RPB=0.562708;MQB=0.803868;MQSB=0.891517;BQB=0.763675;MQ0F=0;AF1=0.5;AC1=1;DP4=5,2,0,4;MQ=57;FQ=58.0154;PV4=0.0606061,1,0.100197,1 GT:PL 0/1:85,0,177
Scaffold_1 680794 . A G 55.0072 PASS DP=11;VDB=0.0467807;SGB=-0.556411;RPB=0.562708;MQB=0.803868;MQSB=0.891517;BQB=0.361741;MQ0F=0;AF1=0.5;AC1=1;DP4=5,2,0,4;MQ=57;FQ=58.0154;PV4=0.0606061,1,0.100197,1 GT:PL 0/1:85,0,166
Scaffold_1 680798 . G A 58.0073 PASS DP=10;VDB=0.0320192;SGB=-0.556411;RPB=0.279932;MQB=0.783809;MQSB=0.895781;BQB=0.727822;MQ0F=0;AF1=0.5;AC1=1;DP4=4,2,0,4;MQ=57;FQ=61.0154;PV4=0.0761905,1,0.120752,1 GT:PL 0/1:88,0,165
Scaffold_1 681820 . A T 13.2188 PASS DP=11;VDB=0.02;SGB=-0.453602;RPB=0.666667;MQB=1;MQSB=1;BQB=0.333333;MQ0F=0;AF1=0.499987;AC1=1;DP4=8,1,2,0;MQ=60;FQ=16.1222;PV4=1,1,1,1 GT:PL 0/1:43,0,170
Scaffold_1 682092 . C T 35.0083 PASS DP=13;VDB=0.0221621;SGB=-0.511536;RPB=0.040184;MQB=0.040184;MQSB=0.31698;BQB=0.597928;MQ0F=0;AF1=0.5;AC1=1;DP4=3,7,3,0;MQ=56;FQ=38.0158;PV4=0.0699301,1,0,0.000806644 GT:PL 0/1:65,0,216
Scaffold_1 682096 . G A 33.0091 PASS DP=13;VDB=0.0221621;SGB=-0.511536;RPB=0.040184;MQB=0.040184;MQSB=0.31698;BQB=0.968368;MQ0F=0;AF1=0.5;AC1=1;DP4=3,7,3,0;MQ=56;FQ=36.0162;PV4=0.0699301,1,0,0.0144726 GT:PL 0/1:63,0,235
Scaffold_1 682129 . A G 27.0155 PASS DP=13;VDB=0.0437511;SGB=-0.556411;RPB=0.096972;MQB=0.0211283;MQSB=0.245404;BQB=0.898397;MQ0F=0;AF1=0.499999;AC1=1;DP4=3,6,4,0;MQ=53;FQ=30.0194;PV4=0.0699301,0.409331,0.000189539,1 GT:PL 0/1:57,0,211
Scaffold_1 682171 . C T 35.0083 PASS DP=15;VDB=0.0356013;SGB=-0.556411;RPB=1;MQB=0.0183156;MQSB=0.301194;BQB=0.939413;MQ0F=0;AF1=0.5;AC1=1;DP4=4,6,4,0;MQ=54;FQ=38.0158;PV4=0.0849151,1,8.75085e-05,1 GT:PL 0/1:65,0,232
Scaffold_1 682182 . G A 40.0075 PASS DP=13;VDB=0.0395055;SGB=-0.556411;RPB=0.793923;MQB=0.0249144;MQSB=0.397295;BQB=0.98568;MQ0F=0;AF1=0.5;AC1=1;DP4=4,4,4,0;MQ=53;FQ=43.0154;PV4=0.208081,1,0.000412026,1 GT:PL 0/1:70,0,205
Scaffold_1 682209 . C T 35.0083 PASS DP=13;VDB=0.0320192;SGB=-0.556411;RPB=0.304076;MQB=0.0211283;MQSB=0.342519;BQB=0.558035;MQ0F=0;AF1=0.5;AC1=1;DP4=4,5,4,0;MQ=53;FQ=38.0158;PV4=0.104895,0.0733249,0.000189539,1 GT:PL 0/1:65,0,238
Scaffold_1 682211 . A G 37.0079 PASS DP=13;VDB=0.0356013;SGB=-0.556411;RPB=0.304076;MQB=0.0211283;MQSB=0.342519;BQB=0.953497;MQ0F=0;AF1=0.5;AC1=1;DP4=4,5,4,0;MQ=53;FQ=40.0156;PV4=0.104895,1,0.000189539,0.393327 GT:PL 0/1:67,0,230
Scaffold_1 682215 . A G 39.0076 PASS DP=13;VDB=0.0320192;SGB=-0.556411;RPB=0.304076;MQB=0.0211283;MQSB=0.342519;BQB=0.928296;MQ0F=0;AF1=0.5;AC1=1;DP4=4,5,4,0;MQ=53;FQ=42.0155;PV4=0.104895,0.280723,0.000189539,0.201243 GT:PL 0/1:69,0,238
Scaffold_1 682316 . A C 44.0073 PASS DP=11;VDB=0.00872848;SGB=-0.556411;RPB=0.0401934;MQB=0.0401934;MQSB=0.361741;BQB=0.924449;MQ0F=0;AF1=0.5;AC1=1;DP4=4,3,0,4;MQ=52;FQ=47.0153;PV4=0.193939,1,0.000899651,0.0330582 GT:PL 0/1:74,0,198
Scaffold_1 682318 . C T 24.0241 PASS DP=11;VDB=0.00872848;SGB=-0.556411;RPB=0.0401934;MQB=0.0401934;MQSB=0.361741;BQB=0.562708;MQ0F=0;AF1=0.499999;AC1=1;DP4=4,3,0,4;MQ=52;FQ=27.0236;PV4=0.193939,0.0312773,0.000899651,0.109334 GT:PL 0/1:54,0,198
Scaffold_1 682351 . G A 51.0072 PASS DP=9;VDB=0.00872848;SGB=-0.556411;RPB=0.124046;MQB=0.124046;MQSB=1;BQB=0.992367;MQ0F=0;AF1=0.5;AC1=1;DP4=1,3,0,4;MQ=49;FQ=54.0151;PV4=1,1,0.00975575,1 GT:PL 0/1:81,0,123
Scaffold_1 682353 . A G 49.0072 PASS DP=9;VDB=0.00872848;SGB=-0.556411;RPB=0.0812164;MQB=0.0812164;MQSB=0.428571;BQB=0.649731;MQ0F=0;AF1=0.5;AC1=1;DP4=2,3,0,4;MQ=50;FQ=52.0153;PV4=0.444444,1,0.00436828,1 GT:PL 0/1:79,0,133
Scaffold_1 682356 . A T 49.0072 PASS DP=9;VDB=0.00872848;SGB=-0.556411;RPB=0.0812164;MQB=0.0812164;MQSB=0.428571;BQB=0.89338;MQ0F=0;AF1=0.5;AC1=1;DP4=2,3,0,4;MQ=50;FQ=52.0153;PV4=0.444444,1,0.00436828,1 GT:PL 0/1:79,0,151
Scaffold_1 682370 . C T 49.0072 PASS DP=9;VDB=0.00992398;SGB=-0.556411;RPB=0.0812164;MQB=0.0812164;MQSB=0.428571;BQB=0.89338;MQ0F=0;AF1=0.5;AC1=1;DP4=2,3,0,4;MQ=50;FQ=52.0153;PV4=0.444444,1,0.00436828,1 GT:PL 0/1:79,0,138
Scaffold_1 682371 . C T 49.0072 PASS DP=9;VDB=0.00872848;SGB=-0.556411;RPB=0.0812164;MQB=0.0812164;MQSB=0.428571;BQB=0.649731;MQ0F=0;AF1=0.5;AC1=1;DP4=2,3,0,4;MQ=50;FQ=52.0153;PV4=0.444444,1,0.00436828,1 GT:PL 0/1:79,0,139
Scaffold_1 682379 . T C 49.0072 PASS DP=9;VDB=0.00872848;SGB=-0.556411;RPB=0.0812164;MQB=0.0812164;MQSB=0.428571;BQB=0.89338;MQ0F=0;AF1=0.5;AC1=1;DP4=2,3,0,4;MQ=50;FQ=52.0153;PV4=0.444444,1,0.00436828,1 GT:PL 0/1:79,0,151
Scaffold_1 682389 . C T 51.0072 PASS DP=9;VDB=0.00872848;SGB=-0.556411;RPB=0.124046;MQB=0.124046;MQSB=1;BQB=0.992367;MQ0F=0;AF1=0.5;AC1=1;DP4=1,3,0,4;MQ=49;FQ=54.0151;PV4=1,1,0.00975575,1 GT:PL 0/1:81,0,123
Scaffold_1 682392 . C T 49.0072 PASS DP=8;VDB=0.00872848;SGB=-0.556411;RPB=0.124046;MQB=0.124046;MQSB=1;BQB=0.868321;MQ0F=0;AF1=0.5;AC1=1;DP4=1,3,0,4;MQ=49;FQ=52.0142;PV4=1,1,0.00975575,1 GT:PL 0/1:79,0,115
Scaffold_1 682407 . C A 23.0285 PASS DP=7;VDB=0.02;SGB=-0.453602;RPB=1;MQB=0.6;MQSB=1;BQB=1;MQ0F=0;AF1=0.499999;AC1=1;DP4=1,4,0,2;MQ=47;FQ=26.0258;PV4=1,1,0.407105,1 GT:PL 0/1:53,0,124
Scaffold_1 682413 . G C 51.0072 PASS DP=8;VDB=0.00872848;SGB=-0.556411;RPB=0.992367;MQB=0.124046;MQSB=0.333333;BQB=0.868321;MQ0F=0;AF1=0.5;AC1=1;DP4=2,2,0,4;MQ=49;FQ=54.0148;PV4=0.428571,1,0.00975575,1 GT:PL 0/1:81,0,120
Scaffold_1 682433 . G A 53.0072 PASS DP=7;VDB=0.00992398;SGB=-0.556411;RPB=0.202566;MQB=0.202566;MQSB=0.2;BQB=0.810265;MQ0F=0;AF1=0.5;AC1=1;DP4=2,1,0,4;MQ=47;FQ=54.822;PV4=0.142857,1,0.0221075,1 GT:PL 0/1:83,0,88
Scaffold_1 682436 . C T 53.0072 PASS DP=7;VDB=0.00992398;SGB=-0.556411;RPB=0.202566;MQB=0.202566;MQSB=0.2;BQB=0.810265;MQ0F=0;AF1=0.5;AC1=1;DP4=2,1,0,4;MQ=47;FQ=55.5004;PV4=0.142857,1,0.0221075,0.349773 GT:PL 0/1:83,0,92
Scaffold_1 691120 . T C 20.0499 PASS DP=5;VDB=0.18;SGB=-0.453602;RPB=1;MQB=0.666667;MQSB=0.833333;BQB=0.666667;MQ0F=0;AF1=0.499998;AC1=1;DP4=2,1,1,1;MQ=44;FQ=23.0094;PV4=1,1,0.322015,1 GT:PL 0/1:50,0,72
Scaffold_1 691127 . A G 29.0123 PASS DP=5;VDB=0.192436;SGB=-0.511536;RPB=0.333333;MQB=0;MQSB=0.833333;BQB=1;MQ0F=0;AF1=0.5;AC1=1;DP4=1,1,2,1;MQ=44;FQ=30.5634;PV4=1,0.412556,0.0245349,0.247513 GT:PL 0/1:59,0,63
Scaffold_1 691148 . G A 11.3381 PASS DP=8;VDB=0.18;SGB=-0.453602;RPB=0.5;MQB=0.333333;MQSB=0.833333;BQB=0.666667;MQ0F=0;AF1=0.49998;AC1=1;DP4=5,1,1,1;MQ=50;FQ=14.1838;PV4=0.464286,1,0.126949,1 GT:PL 0/1:41,0,147
Scaffold_1 691153 . G A 11.3381 PASS DP=8;VDB=0.18;SGB=-0.453602;RPB=0.5;MQB=0.333333;MQSB=0.833333;BQB=0.666667;MQ0F=0;AF1=0.49998;AC1=1;DP4=5,1,1,1;MQ=50;FQ=14.1838;PV4=0.464286,1,0.126949,1 GT:PL 0/1:41,0,147
Scaffold_1 691169 . T C 10.42 PASS DP=10;VDB=0.78654;SGB=-0.511536;RPB=0.824834;MQB=0.183296;MQSB=1;BQB=0.916482;MQ0F=0;AF1=0.499975;AC1=1;DP4=7,0,2,1;MQ=49;FQ=13.2265;PV4=0.3,1,0.0232971,0.437739 GT:PL 0/1:40,0,136
Scaffold_1 691181 . A G 46.0072 PASS DP=12;VDB=0.904828;SGB=-0.590765;RPB=0.6821;MQB=0.0194886;MQSB=1;BQB=0.6821;MQ0F=0;AF1=0.5;AC1=1;DP4=7,0,4,1;MQ=49;FQ=49.0153;PV4=0.416667,1,6.71897e-05,1 GT:PL 0/1:76,0,137
Scaffold_1 691202 . A G 34.0087 PASS DP=14;VDB=0.88811;SGB=-0.511536;RPB=0.596251;MQB=0.213796;MQSB=1;BQB=0.540433;MQ0F=0;AF1=0.5;AC1=1;DP4=9,0,2,1;MQ=51;FQ=37.016;PV4=0.25,1,0.0880896,0.449773 GT:PL 0/1:64,0,151
Scaffold_1 691204 . G T 28.0137 PASS DP=14;VDB=0.878371;SGB=-0.511536;RPB=0.416546;MQB=0.150478;MQSB=0.996974;BQB=0.646383;MQ0F=0;AF1=0.5;AC1=1;DP4=9,2,2,1;MQ=52;FQ=31.0185;PV4=1,1,0.0530745,1 GT:PL 0/1:58,0,195
Scaffold_1 691226 . T C 62.0073 PASS DP=14;VDB=0.570714;SGB=-0.590765;RPB=0.876998;MQB=0.0137638;MQSB=1;BQB=0.547344;MQ0F=0;AF1=0.5;AC1=1;DP4=7,1,5,0;MQ=52;FQ=65.0155;PV4=1,1,0.000142141,0.19955 GT:PL 0/1:92,0,166
Scaffold_1 691278 . A G 27.0155 PASS DP=18;VDB=0.803107;SGB=-0.556411;RPB=0.463395;MQB=0.166643;MQSB=0.461538;BQB=0.997872;MQ0F=0;AF1=0.499999;AC1=1;DP4=9,2,4,0;MQ=50;FQ=30.0194;PV4=1,1,0.0230694,0.385679 GT:PL 0/1:57,0,191
Scaffold_1 691286 . G A 68.0074 PASS DP=18;VDB=0.90274;SGB=-0.636426;RPB=0.110671;MQB=0.0029283;MQSB=0.533333;BQB=0.989343;MQ0F=0;AF1=0.5;AC1=1;DP4=8,2,7,0;MQ=51;FQ=71.0155;PV4=0.485294,0.454821,5.48501e-06,1 GT:PL 0/1:98,0,207
Scaffold_1 691351 . G A 52.0072 PASS DP=16;VDB=0.303109;SGB=-0.556411;RPB=0.211556;MQB=0.0851732;MQSB=0.317132;BQB=0.991513;MQ0F=0;AF1=0.5;AC1=1;DP4=8,3,4,0;MQ=51;FQ=55.0154;PV4=0.516484,1,0.0600524,1 GT:PL 0/1:82,0,237
Scaffold_1 691369 . A G 162.009 PASS DP=19;VDB=0.754296;SGB=-0.670168;RPB=0.965097;MQB=0.0452869;MQSB=0.144538;BQB=0.0361623;MQ0F=0;AF1=0.5;AC1=1;DP4=3,5,9,1;MQ=53;FQ=133.014;PV4=0.0429864,1,0.0036487,1 GT:PL 0/1:192,0,160
Scaffold_1 691378 . G A 86.0076 PASS DP=20;VDB=0.149847;SGB=-0.616816;RPB=0.522046;MQB=0.984733;MQSB=0.447727;BQB=1;MQ0F=0;AF1=0.5;AC1=1;DP4=7,6,5,1;MQ=52;FQ=89.0158;PV4=0.333075,1,0.351942,1 GT:PL 0/1:116,0,255
Scaffold_1 691405 . C T 15.1417 PASS DP=24;VDB=0.794163;SGB=-0.556411;RPB=0.350954;MQB=0.0427204;MQSB=0.672875;BQB=0.999095;MQ0F=0;AF1=0.499992;AC1=1;DP4=9,9,3,1;MQ=53;FQ=18.0829;PV4=0.593985,0.27689,0.00314646,0.485823 GT:PL 0/1:45,0,255
Scaffold_1 691410 . C T 11.3381 PASS DP=24;VDB=0.37344;SGB=-0.511536;RPB=0.0867743;MQB=0.132629;MQSB=0.441233;BQB=0.955563;MQ0F=0;AF1=0.49998;AC1=1;DP4=9,9,3,0;MQ=53;FQ=14.1838;PV4=0.228571,0.469525,0.0998712,0.102089 GT:PL 0/1:41,0,255
Scaffold_1 691418 . G A 120.008 PASS DP=24;VDB=0.012598;SGB=-0.616816;RPB=0.828232;MQB=0.908324;MQSB=0.807887;BQB=0.732319;MQ0F=0;AF1=0.5;AC1=1;DP4=6,7,4,2;MQ=53;FQ=123.016;PV4=0.628483,1,0.464985,1 GT:PL 0/1:150,0,255
Scaffold_1 691419 . C G 117.008 PASS DP=24;VDB=0.0137686;SGB=-0.616816;RPB=0.823708;MQB=0.823708;MQSB=0.799507;BQB=0.297565;MQ0F=0;AF1=0.5;AC1=1;DP4=7,8,4,2;MQ=54;FQ=120.016;PV4=0.635117,1,0.425916,1 GT:PL 0/1:147,0,255
Scaffold_1 691430 . G A 118.008 PASS DP=27;VDB=0.162869;SGB=-0.636426;RPB=0.914166;MQB=0.348212;MQSB=0.849513;BQB=0.498362;MQ0F=0;AF1=0.5;AC1=1;DP4=8,10,4,3;MQ=54;FQ=121.016;PV4=0.672769,1,0.0817249,1 GT:PL 0/1:148,0,255
Scaffold_1 691525 . T C 36.0081 PASS DP=25;VDB=0.89732;SGB=-0.556411;RPB=0.964547;MQB=0.45562;MQSB=0.951033;BQB=0.984085;MQ0F=0;AF1=0.5;AC1=1;DP4=9,8,1,3;MQ=52;FQ=39.0157;PV4=0.586466,0.383654,0.276456,0.202503 GT:PL 0/1:66,0,255
Scaffold_1 691543 . T G 20.0499 PASS DP=25;VDB=0.621812;SGB=-0.651104;RPB=0.70694;MQB=0.018525;MQSB=0.818054;BQB=0.685489;MQ0F=0;AF1=0.499997;AC1=1;DP4=7,6,4,4;MQ=53;FQ=23.0366;PV4=1,0.0860739,0.00023695,1 GT:PL 0/1:50,0,255
Scaffold_1 691553 . G A 85.0076 PASS DP=22;VDB=0.311328;SGB=-0.636426;RPB=0.839457;MQB=0.040184;MQSB=0.618783;BQB=1;MQ0F=0;AF1=0.5;AC1=1;DP4=6,6,4,3;MQ=54;FQ=88.0158;PV4=1,0.151735,0.000719453,1 GT:PL 0/1:115,0,255
Scaffold_1 691588 . C T 42.0073 PASS DP=22;VDB=0.568985;SGB=-0.511536;RPB=0.893793;MQB=0.998247;MQSB=0.319567;BQB=0.917626;MQ0F=0;AF1=0.5;AC1=1;DP4=7,8,1,2;MQ=55;FQ=45.0154;PV4=1,1,1,1 GT:PL 0/1:72,0,255
Scaffold_1 691612 . T A 93.0077 PASS DP=23;VDB=0.764622;SGB=-0.590765;RPB=0.781682;MQB=0.884505;MQSB=0.776837;BQB=0.992359;MQ0F=0;AF1=0.5;AC1=1;DP4=8,8,1,4;MQ=54;FQ=96.0159;PV4=0.338346,1,1,1 GT:PL 0/1:123,0,255
Scaffold_1 691637 . C G 36.0081 PASS DP=22;VDB=0.303109;SGB=-0.556411;RPB=0.904595;MQB=0.937845;MQSB=0.999305;BQB=0.904595;MQ0F=0;AF1=0.5;AC1=1;DP4=7,10,0,4;MQ=54;FQ=39.0157;PV4=0.254971,1,1,1 GT:PL 0/1:66,0,255
Scaffold_1 691678 . A G 55.0072 PASS DP=16;VDB=0.0343724;SGB=-0.556411;RPB=0.767432;MQB=0.514992;MQSB=0.236017;BQB=1;MQ0F=0;AF1=0.5;AC1=1;DP4=5,7,0,4;MQ=55;FQ=58.0154;PV4=0.244505,1,1,1 GT:PL 0/1:85,0,255
Scaffold_1 691699 . A G 82.0076 PASS DP=15;VDB=0.0411825;SGB=-0.616816;RPB=0.105399;MQB=0.0297292;MQSB=0.128634;BQB=0.957526;MQ0F=0;AF1=0.5;AC1=1;DP4=7,2,0,6;MQ=56;FQ=85.0157;PV4=0.00699301,1,0.0173264,1 GT:PL 0/1:112,0,210
Scaffold_1 691705 . A G 47.0072 PASS DP=16;VDB=0.0411825;SGB=-0.616816;RPB=0.0747118;MQB=0.0253122;MQSB=0.17984;BQB=0.749585;MQ0F=0;AF1=0.5;AC1=1;DP4=7,3,0,6;MQ=56;FQ=50.0153;PV4=0.0113636,0.0979189,0.0127747,0.408798 GT:PL 0/1:77,0,236
Scaffold_1 691708 . T C 67.0074 PASS DP=16;VDB=0.0411825;SGB=-0.616816;RPB=0.0747118;MQB=0.0253122;MQSB=0.17984;BQB=0.555306;MQ0F=0;AF1=0.5;AC1=1;DP4=7,3,0,6;MQ=56;FQ=70.0155;PV4=0.0113636,0.0778669,0.0127747,0.252491 GT:PL 0/1:97,0,239
Scaffold_1 695877 . C T 19.061 PASS DP=10;VDB=0.02;SGB=-0.453602;RPB=0.285714;MQB=1;MQSB=1;BQB=0.428571;MQ0F=0;AF1=0.499997;AC1=1;DP4=2,5,0,2;MQ=60;FQ=22.0421;PV4=1,1,1,1 GT:PL 0/1:49,0,179
Scaffold_1 721309 . G T 13.2188 PASS DP=14;VDB=0.02;SGB=-0.453602;RPB=0.222222;MQB=1;MQSB=0.950952;BQB=1;MQ0F=0;AF1=0.499987;AC1=1;DP4=4,5,2,0;MQ=60;FQ=16.1222;PV4=0.454545,0.284042,1,1 GT:PL 0/1:43,0,255
Scaffold_1 722448 . A G 222.016 PASS DP=11;VDB=0.418469;SGB=-0.662043;MQSB=0.974597;MQ0F=0;AF1=1;AC1=2;DP4=0,0,5,4;MQ=60;FQ=-53.9861 GT:PL 1/1:255,27,0
Scaffold_1 741284 . C G 17.0924 PASS DP=7;VDB=0.28;SGB=-0.453602;RPB=0;MQB=0.5;MQSB=1;BQB=0.333333;MQ0F=0;AF1=0.499995;AC1=1;DP4=2,1,2,0;MQ=55;FQ=20.0577;PV4=1,1,0.136114,0.136114 GT:PL 0/1:47,0,89
Scaffold_1 741303 . A G 67.0074 PASS DP=8;VDB=0.0452455;SGB=-0.556411;RPB=0.62023;MQB=0.868321;MQSB=0.833333;BQB=0.62023;MQ0F=0;AF1=0.5;AC1=1;DP4=2,2,4,0;MQ=57;FQ=65.8911;PV4=0.428571,1,0.177959,1 GT:PL 0/1:97,0,95
Scaffold_1 741328 . A C 58.0073 PASS DP=10;VDB=0.0949329;SGB=-0.556411;RPB=0.730948;MQB=0.487298;MQSB=0.809011;BQB=0.730948;MQ0F=0;AF1=0.5;AC1=1;DP4=2,3,4,0;MQ=56;FQ=61.015;PV4=0.166667,1,0.0869954,1 GT:PL 0/1:88,0,128
Scaffold_1 741343 . A C 81.0075 PASS DP=10;VDB=0.0376133;SGB=-0.590765;RPB=0.761877;MQB=0.666643;MQSB=0.733186;BQB=0.428556;MQ0F=0;AF1=0.5;AC1=1;DP4=2,3,5,0;MQ=57;FQ=83.2256;PV4=0.166667,1,0.115174,1 GT:PL 0/1:111,0,118
Scaffold_1 741411 . C T 67.0074 PASS DP=7;VDB=0.0343724;SGB=-0.556411;RPB=0.202566;MQB=0.810265;MQSB=0.8;BQB=0.810265;MQ0F=0;AF1=0.5;AC1=1;DP4=1,2,4,0;MQ=59;FQ=52.9295;PV4=0.142857,1,0.218294,0.0808398 GT:PL 0/1:97,0,80
Scaffold_1 741586 . A G 56.0072 PASS DP=14;VDB=0.304345;SGB=-0.590765;RPB=0.923116;MQB=0.011109;MQSB=0.035674;BQB=0.278037;MQ0F=0;AF1=0.5;AC1=1;DP4=8,1,0,5;MQ=53;FQ=59.0154;PV4=0.002997,0.10951,9.05926e-08,1 GT:PL 0/1:86,0,188
Scaffold_1 741608 . A C 61.0073 PASS DP=15;VDB=0.308315;SGB=-0.590765;RPB=1;MQB=0.0137638;MQSB=0.0511259;BQB=0.935229;MQ0F=0;AF1=0.5;AC1=1;DP4=7,1,0,5;MQ=52;FQ=64.0155;PV4=0.004662,0.246635,3.79592e-07,1 GT:PL 0/1:91,0,176
Scaffold_1 741622 . A G 49.0072 PASS DP=14;VDB=0.535497;SGB=-0.556411;RPB=0.746718;MQB=0.0249144;MQSB=0.0974428;BQB=0.697274;MQ0F=0;AF1=0.5;AC1=1;DP4=7,1,0,4;MQ=53;FQ=52.0153;PV4=0.010101,1,1.34284e-06,1 GT:PL 0/1:79,0,167
Scaffold_1 741638 . G A 64.0073 PASS DP=15;VDB=0.332598;SGB=-0.590765;RPB=0.342519;MQB=0.0137638;MQSB=0.112477;BQB=0.935229;MQ0F=0;AF1=0.5;AC1=1;DP4=6,2,0,5;MQ=52;FQ=67.0155;PV4=0.020979,0.41385,3.79592e-07,1 GT:PL 0/1:94,0,193
Scaffold_1 741649 . G A 49.0072 PASS DP=14;VDB=0.292086;SGB=-0.556411;RPB=0.826565;MQB=0.0211283;MQSB=0.143152;BQB=0.697593;MQ0F=0;AF1=0.5;AC1=1;DP4=7,2,0,4;MQ=54;FQ=52.0153;PV4=0.020979,1,3.37762e-07,1 GT:PL 0/1:79,0,189
Scaffold_1 741650 . C T 51.0072 PASS DP=14;VDB=0.292086;SGB=-0.556411;RPB=0.466776;MQB=0.0211283;MQSB=0.143152;BQB=0.466776;MQ0F=0;AF1=0.5;AC1=1;DP4=7,2,0,4;MQ=54;FQ=54.0154;PV4=0.020979,1,3.37762e-07,1 GT:PL 0/1:81,0,198
Scaffold_1 741664 . A G 46.0072 PASS DP=11;VDB=0.220755;SGB=-0.511536;RPB=0.809011;MQB=0.115573;MQSB=0.406082;BQB=0.462292;MQ0F=0;AF1=0.5;AC1=1;DP4=4,2,0,3;MQ=54;FQ=49.0153;PV4=0.166667,1,0,1 GT:PL 0/1:76,0,155
Scaffold_1 741707 . T C 20.0499 PASS DP=12;VDB=0.14;SGB=-0.453602;RPB=0.166667;MQB=0;MQSB=0.666667;BQB=0.333333;MQ0F=0;AF1=0.499997;AC1=1;DP4=2,4,0,2;MQ=56;FQ=23.0366;PV4=1,1,0,0.296459 GT:PL 0/1:50,0,142
Scaffold_1 747209 . C A 43.0073 PASS DP=18;VDB=0.0896691;SGB=-0.556411;RPB=0.397295;MQB=0.924478;MQSB=0.393241;BQB=0.66348;MQ0F=0.0555556;AF1=0.5;AC1=1;DP4=6,7,4,0;MQ=44;FQ=46.0153;PV4=0.102941,1,1,1 GT:PL 0/1:73,0,206
Scaffold_1 747236 . C T 35.0083 PASS DP=19;VDB=0.0896691;SGB=-0.556411;RPB=0.816272;MQB=0.843173;MQSB=0.422203;BQB=0.913725;MQ0F=0.0526316;AF1=0.5;AC1=1;DP4=7,7,4,0;MQ=44;FQ=38.0158;PV4=0.119281,0.292146,1,1 GT:PL 0/1:65,0,247
Scaffold_1 747250 . A T 38.0077 PASS DP=18;VDB=0.0896691;SGB=-0.556411;RPB=1;MQB=0.924478;MQSB=0.542747;BQB=0.99361;MQ0F=0.111111;AF1=0.5;AC1=1;DP4=7,6,4,0;MQ=44;FQ=41.0155;PV4=0.237395,1,1,1 GT:PL 0/1:68,0,221
Scaffold_1 747517 . T C 72.0074 PASS DP=18;VDB=0.0390351;SGB=-0.636426;RPB=0.273507;MQB=0.010294;MQSB=0.92664;BQB=0.943335;MQ0F=0.166667;AF1=0.5;AC1=1;DP4=4,6,3,4;MQ=47;FQ=75.0156;PV4=1,1,0.000292342,1 GT:PL 0/1:102,0,229
Scaffold_1 747519 . A T 39.0076 PASS DP=18;VDB=0.100421;SGB=-0.556411;RPB=0.913864;MQB=0.119433;MQSB=0.978183;BQB=0.935966;MQ0F=0.166667;AF1=0.5;AC1=1;DP4=6,6,2,2;MQ=49;FQ=42.0155;PV4=1,1,0.0900611,1 GT:PL 0/1:69,0,234
Scaffold_1 747546 . G A 87.0076 PASS DP=21;VDB=0.421219;SGB=-0.616816;RPB=0.669812;MQB=0.738577;MQSB=0.572438;BQB=0.940481;MQ0F=0.238095;AF1=0.5;AC1=1;DP4=6,9,4,2;MQ=43;FQ=90.0158;PV4=0.361455,1,0.462364,1 GT:PL 0/1:117,0,219
Scaffold_1 747746 . T C 46.0072 PASS DP=14;VDB=0.101965;SGB=-0.616816;RPB=0.471383;MQB=0.035674;MQSB=0.875173;BQB=0.740818;MQ0F=0.0714286;AF1=0.5;AC1=1;DP4=5,3,3,3;MQ=51;FQ=49.0153;PV4=1,1,0.00170172,1 GT:PL 0/1:76,0,209
Scaffold_1 747753 . C T 39.0076 PASS DP=13;VDB=0.325692;SGB=-0.556411;RPB=0.466776;MQB=0.511891;MQSB=0.935229;BQB=0.997028;MQ0F=0.0769231;AF1=0.5;AC1=1;DP4=7,2,1,3;MQ=50;FQ=42.0155;PV4=0.216783,1,0.272557,1 GT:PL 0/1:69,0,176
Scaffold_1 791754 . T A 10.42 PASS DP=12;VDB=0.02;SGB=-0.453602;RPB=0;MQB=1;MQSB=1;BQB=1;MQ0F=0;AF1=0.499975;AC1=1;DP4=8,2,0,2;MQ=60;FQ=13.2265;PV4=0.0909091,1,1,0.0385412 GT:PL 0/1:40,0,225
Scaffold_1 796458 . A G 20.0499 PASS DP=12;VDB=0.78;SGB=-0.453602;RPB=0.875;MQB=0;MQSB=0.625;BQB=0.875;MQ0F=0;AF1=0.499997;AC1=1;DP4=7,1,1,1;MQ=57;FQ=23.0366;PV4=0.377778,0.334458,0,1 GT:PL 0/1:50,0,212
Scaffold_1 796472 . T G 13.2188 PASS DP=12;VDB=0.78;SGB=-0.453602;RPB=0.666667;MQB=0;MQSB=0.666667;BQB=0.416667;MQ0F=0;AF1=0.499987;AC1=1;DP4=5,1,1,1;MQ=56;FQ=16.1222;PV4=0.464286,0.0975747,0,0.268482 GT:PL 0/1:43,0,191
Scaffold_1 800060 . G T 30.0112 PASS DP=8;VDB=0.14;SGB=-0.453602;RPB=0;MQB=0;MQSB=0.8;BQB=0.8;MQ0F=0;AF1=0.5;AC1=1;DP4=1,4,1,1;MQ=57;FQ=33.0172;PV4=1,0.288066,0.0126937,1 GT:PL 0/1:60,0,166
Scaffold_1 800109 . A G 27.0155 PASS DP=8;VDB=0.18;SGB=-0.453602;RPB=0.916667;MQB=0;MQSB=0.75;BQB=0.666667;MQ0F=0;AF1=0.499999;AC1=1;DP4=1,5,1,1;MQ=57;FQ=30.0194;PV4=0.464286,1,0.00614256,1 GT:PL 0/1:57,0,158
Scaffold_1 800114 . A T 24.0241 PASS DP=9;VDB=0.18;SGB=-0.453602;RPB=0.857143;MQB=0;MQSB=0.924584;BQB=0.714286;MQ0F=0;AF1=0.499999;AC1=1;DP4=2,5,1,1;MQ=58;FQ=27.0236;PV4=1,1,0.00299198,1 GT:PL 0/1:54,0,192
Scaffold_1 800637 . A T 97.2638 PASS DP=8;VDB=0.0190751;SGB=-0.590765;MQ0F=0;AF1=1;AC1=2;DP4=0,0,5,0;MQ=47;FQ=-41.9862 GT:PL 1/1:130,15,0
Scaffold_1 800638 . T C 116.133 PASS DP=8;VDB=0.293058;SGB=-0.616816;MQ0F=0;AF1=1;AC1=2;DP4=0,0,6,0;MQ=53;FQ=-44.9861 GT:PL 1/1:149,18,0
Scaffold_1 800639 . C A 133.032 PASS DP=8;VDB=0.391871;SGB=-0.651104;MQ0F=0;AF1=1;AC1=2;DP4=0,0,8,0;MQ=50;FQ=-50.986 GT:PL 1/1:166,24,0
Scaffold_1 801063 . G T 116.264 PASS DP=6;VDB=0.717074;SGB=-0.590765;MQSB=1;MQ0F=0;AF1=1;AC1=2;DP4=0,0,1,4;MQ=60;FQ=-41.9862 GT:PL 1/1:149,15,0
Scaffold_1 804315 . T C 179.033 PASS DP=10;VDB=0.369149;SGB=-0.651104;MQSB=0.833333;MQ0F=0;AF1=1;AC1=2;DP4=0,0,6,2;MQ=56;FQ=-50.986 GT:PL 1/1:212,24,0
Scaffold_1 810524 . G T 22.0341 PASS DP=8;VDB=0.02;SGB=-0.453602;RPB=0.666667;MQB=1;MQSB=0.900802;BQB=0.666667;MQ0F=0;AF1=0.499998;AC1=1;DP4=3,3,2,0;MQ=60;FQ=25.0286;PV4=0.464286,1,1,0.487461 GT:PL 0/1:52,0,177
Scaffold_1 813761 . C T 26.0177 PASS DP=6;VDB=0.42;SGB=-0.453602;RPB=0;MQB=0;BQB=0.5;MQ0F=0;AF1=0.499999;AC1=1;DP4=4,0,2,0;MQ=54;FQ=29.0202;PV4=1,1,0,0.275429 GT:PL 0/1:56,0,99
Scaffold_1 813787 . G A 11.3381 PASS DP=6;VDB=0.38;SGB=-0.453602;RPB=0.5;MQB=0;MQSB=1;BQB=0.75;MQ0F=0;AF1=0.49998;AC1=1;DP4=3,1,2,0;MQ=54;FQ=14.1838;PV4=1,0.274331,0,1 GT:PL 0/1:41,0,114
Scaffold_1 813803 . C A 22.0341 PASS DP=5;VDB=0.38;SGB=-0.453602;RPB=0.666667;MQB=0;MQSB=1;BQB=1;MQ0F=0;AF1=0.499998;AC1=1;DP4=2,1,2,0;MQ=53;FQ=25.0279;PV4=1,0.487102,0,1 GT:PL 0/1:52,0,90
Scaffold_1 813822 . G C 20.0499 PASS DP=8;VDB=0.38;SGB=-0.453602;RPB=0.333333;MQB=0;MQSB=0.666667;BQB=1;MQ0F=0;AF1=0.499997;AC1=1;DP4=4,2,2,0;MQ=56;FQ=23.0366;PV4=1,1,0,1 GT:PL 0/1:50,0,179
Scaffold_1 813823 . A G 14.176 PASS DP=8;VDB=0.38;SGB=-0.453602;RPB=0.333333;MQB=0;MQSB=0.666667;BQB=0.5;MQ0F=0;AF1=0.49999;AC1=1;DP4=4,2,2,0;MQ=56;FQ=17.1004;PV4=1,0.0390704,0,1 GT:PL 0/1:44,0,179
Scaffold_1 813841 . G A 36.0081 PASS DP=10;VDB=0.800701;SGB=-0.511536;RPB=1.01283;MQB=0.202566;MQSB=0.4;BQB=0.810265;MQ0F=0;AF1=0.5;AC1=1;DP4=2,2,3,0;MQ=52;FQ=39.0157;PV4=0.428571,0.173583,0,0.464415 GT:PL 0/1:66,0,119
Scaffold_1 813843 . T A 44.0073 PASS DP=10;VDB=0.800701;SGB=-0.511536;RPB=0.924584;MQB=0.115573;MQSB=0.571429;BQB=0.346719;MQ0F=0;AF1=0.5;AC1=1;DP4=4,2,3,0;MQ=54;FQ=47.0153;PV4=0.5,1,0,0.442851 GT:PL 0/1:74,0,145
Scaffold_1 814123 . G A 10.42 PASS DP=12;VDB=0.94;SGB=-0.453602;RPB=0.944444;MQB=0;MQSB=0.683497;BQB=0.888889;MQ0F=0;AF1=0.499975;AC1=1;DP4=5,4,0,2;MQ=57;FQ=13.2265;PV4=0.454545,1,7.1493e-09,0.286673 GT:PL 0/1:40,0,221
Scaffold_1 814166 . C G 13.2188 PASS DP=11;VDB=0.44;SGB=-0.453602;RPB=0.277778;MQB=0.5;MQSB=0.891517;BQB=0.555556;MQ0F=0;AF1=0.499987;AC1=1;DP4=5,4,0,2;MQ=59;FQ=16.1222;PV4=0.454545,1,0.0119282,1 GT:PL 0/1:43,0,211
Scaffold_1 814189 . A G 12.272 PASS DP=10;VDB=0.44;SGB=-0.453602;RPB=0.5;MQB=0.5;MQSB=0.809011;BQB=0.928571;MQ0F=0;AF1=0.499984;AC1=1;DP4=6,1,0,2;MQ=59;FQ=15.1496;PV4=0.0833333,1,0.0261782,1 GT:PL 0/1:42,0,162
Scaffold_1 814192 . G A 25.0205 PASS DP=11;VDB=0.44;SGB=-0.453602;RPB=0.7;MQB=0.5;MQSB=0.810265;BQB=0.6;MQ0F=0;AF1=0.499999;AC1=1;DP4=4,1,0,2;MQ=58;FQ=28.0219;PV4=0.142857,1,0.0586934,1 GT:PL 0/1:55,0,133
Scaffold_1 817000 . A C 16.1143 PASS DP=9;VDB=0.0588947;SGB=-0.511536;RPB=0.150134;MQB=0.150134;MQSB=0.450401;BQB=0.600535;MQ0F=0;AF1=0.499994;AC1=1;DP4=3,2,0,3;MQ=50;FQ=19.069;PV4=0.196429,1,0.000773711,1 GT:PL 0/1:46,0,142
Scaffold_1 817018 . T C 18.0749 PASS DP=8;VDB=0.0649539;SGB=-0.511536;RPB=0.202566;MQB=0.202566;MQSB=0.4;BQB=0.607698;MQ0F=0;AF1=0.499996;AC1=1;DP4=2,2,0,3;MQ=49;FQ=21.0492;PV4=0.428571,1,0.00248331,1 GT:PL 0/1:48,0,123
Scaffold_1 817019 . C T 18.0749 PASS DP=8;VDB=0.0588947;SGB=-0.511536;RPB=0.202566;MQB=0.202566;MQSB=0.4;BQB=0.810265;MQ0F=0;AF1=0.499996;AC1=1;DP4=2,2,0,3;MQ=49;FQ=21.0492;PV4=0.428571,1,0.00248331,1 GT:PL 0/1:48,0,118
Scaffold_1 817039 . G T 16.1143 PASS DP=9;VDB=0.0649539;SGB=-0.511536;RPB=0.900802;MQB=0.150134;MQSB=1;BQB=0.600535;MQ0F=0;AF1=0.499994;AC1=1;DP4=1,4,0,3;MQ=50;FQ=19.069;PV4=1,1,0.000773711,1 GT:PL 0/1:46,0,128
Scaffold_1 817052 . C T 18.0749 PASS DP=7;VDB=0.0588947;SGB=-0.511536;RPB=0.607698;MQB=0.202566;MQSB=1;BQB=0.202566;MQ0F=0;AF1=0.499996;AC1=1;DP4=1,3,0,3;MQ=49;FQ=21.0491;PV4=1,1,0.00248331,1 GT:PL 0/1:48,0,100
Scaffold_1 820102 . A G 57.0615 PASS DP=18;VDB=0.00284673;SGB=-0.636426;RPB=0.442128;MQB=0.361741;MQSB=1;BQB=0.562708;MQ0F=0.333333;AF1=0.50636;AC1=1;DP4=4,0,6,1;MQ=24;FQ=-11.3185;PV4=1,1,1,0.454053 GT:PL 0/1:87,0,16
Scaffold_1 820250 . A G 127.008 PASS DP=60;VDB=0.000368435;SGB=-0.686358;RPB=0.69016;MQB=0.853103;MQSB=0.566691;BQB=0.745026;MQ0F=0.283333;AF1=0.5;AC1=1;DP4=16,7,8,6;MQ=26;FQ=129.043;PV4=0.49484,0.327026,1,1 GT:PL 0/1:157,0,163
Scaffold_1 820277 . C A 82.0076 PASS DP=119;VDB=0.00195232;SGB=-0.692717;RPB=0.137418;MQB=0.570945;MQSB=0.822664;BQB=0.0862691;MQ0F=0.252101;AF1=0.5;AC1=1;DP4=46,18,10,13;MQ=22;FQ=85.0157;PV4=0.0219224,0.0643331,1,1 GT:PL 0/1:112,0,215
Scaffold_1 820322 . A G 39.0076 PASS DP=120;VDB=0.000196925;SGB=-0.690438;RPB=0.417814;MQB=0.23401;MQSB=0.999953;BQB=0.963019;MQ0F=0.266667;AF1=0.5;AC1=1;DP4=39,26,14,3;MQ=22;FQ=42.0155;PV4=0.0977343,0.481976,1,1 GT:PL 0/1:69,0,221
Scaffold_1 820332 . G A 68.0074 PASS DP=105;VDB=3.21425e-06;SGB=-0.689466;RPB=0.704349;MQB=0.481307;MQSB=0.875092;BQB=0.961806;MQ0F=0.238095;AF1=0.5;AC1=1;DP4=25,23,12,4;MQ=24;FQ=71.0155;PV4=0.147288,0.362442,1,1 GT:PL 0/1:98,0,250
Scaffold_1 820342 . A G 84.0076 PASS DP=96;VDB=0.0392371;SGB=-0.692562;RPB=0.934331;MQB=0.701938;MQSB=0.974778;BQB=0.118038;MQ0F=0.208333;AF1=0.5;AC1=1;DP4=19,17,12,10;MQ=25;FQ=87.0157;PV4=1,0.0213167,0.197478,0.474019 GT:PL 0/1:114,0,255
Scaffold_1 820361 . A G 48.0072 PASS DP=84;VDB=0.000719314;SGB=-0.689466;RPB=0.893455;MQB=0.983204;MQSB=0.99996;BQB=0.941001;MQ0F=0.214286;AF1=0.5;AC1=1;DP4=17,20,10,6;MQ=23;FQ=51.0153;PV4=0.371753,1,0.44835,1 GT:PL 0/1:78,0,176
Scaffold_1 820381 . G A 33.0091 PASS DP=71;VDB=0.0185294;SGB=-0.688148;RPB=0.924532;MQB=0.996252;MQSB=0.980253;BQB=0.00540733;MQ0F=0.267606;AF1=0.5;AC1=1;DP4=19,10,2,13;MQ=22;FQ=36.0162;PV4=0.00135755,0.00084951,0.373102,1 GT:PL 0/1:63,0,176
Scaffold_1 820830 . G A 46.0072 PASS DP=28;VDB=0.0849961;SGB=-0.651104;RPB=0.954391;MQB=0.101528;MQSB=0.887766;BQB=0.75484;MQ0F=0.321429;AF1=0.500003;AC1=1;DP4=15,3,6,2;MQ=18;FQ=22.0335;PV4=0.62785,1,1,0.366091 GT:PL 0/1:76,0,49
Scaffold_1 820832 . T C 39.0076 PASS DP=27;VDB=0.000116042;SGB=-0.676189;RPB=0.277953;MQB=0.486669;MQSB=0.945303;BQB=0.983099;MQ0F=0.333333;AF1=0.5;AC1=1;DP4=7,5,11,0;MQ=19;FQ=36.5607;PV4=0.0372671,1,1,1 GT:PL 0/1:69,0,65
Scaffold_1 820834 . C T 41.0074 PASS DP=26;VDB=0.000261893;SGB=-0.680642;RPB=0.20156;MQB=0.530598;MQSB=0.938795;BQB=1;MQ0F=0.346154;AF1=0.500001;AC1=1;DP4=7,5,12,0;MQ=18;FQ=28.8854;PV4=0.0372671,0.485919,1,1 GT:PL 0/1:71,0,56
Scaffold_1 820986 . C A 178.043 PASS DP=43;VDB=1.95907e-08;SGB=-0.692067;RPB=0.57548;MQB=0.252195;MQSB=0.554723;BQB=0.675814;MQ0F=0.139535;AF1=0.503994;AC1=1;DP4=3,4,13,7;MQ=29;FQ=-9.50208;PV4=0.391304,1,1,0.402772 GT:PL 0/1:208,0,18
Scaffold_1 821008 . G A 11.3381 PASS DP=147;VDB=8.49827e-06;SGB=-0.686358;RPB=0.120259;MQB=0.0347615;MQSB=0.250649;BQB=0.48914;MQ0F=0.0816327;AF1=0.49998;AC1=1;DP4=46,37,11,3;MQ=34;FQ=14.1838;PV4=0.144364,0.0495669,1,0.00347801 GT:PL 0/1:41,0,255
Scaffold_1 821027 . G A 64.0073 PASS DP=215;VDB=1.98405e-07;SGB=-0.692976;RPB=0.459212;MQB=0.975421;MQSB=0.0158762;BQB=0.40184;MQ0F=0.116279;AF1=0.5;AC1=1;DP4=66,37,18,8;MQ=33;FQ=67.0155;PV4=0.818234,0.0663887,1,1 GT:PL 0/1:94,0,255
Scaffold_1 821028 . C G 74.0075 PASS DP=221;VDB=4.28308e-09;SGB=-0.69311;RPB=0.162704;MQB=0.982997;MQSB=0.423076;BQB=0.374742;MQ0F=0.126697;AF1=0.5;AC1=1;DP4=64,37,21,10;MQ=34;FQ=77.0156;PV4=0.830514,0.126761,0.426184,1 GT:PL 0/1:104,0,255
Scaffold_1 821031 . A G 225.009 PASS DP=238;VDB=2.72946e-25;SGB=-0.693147;RPB=0.727746;MQB=0.132452;MQSB=0.0626348;BQB=0.729024;MQ0F=0.155462;AF1=0.5;AC1=1;DP4=57,26,37,17;MQ=32;FQ=225.007;PV4=1,0.171224,1,1 GT:PL 0/1:255,0,255
Scaffold_1 821036 . T C 21.0411 PASS DP=252;VDB=4.46502e-07;SGB=-0.692914;RPB=0.209939;MQB=0.90332;MQSB=0.142116;BQB=0.0126556;MQ0F=0.174603;AF1=0.499998;AC1=1;DP4=82,37,13,12;MQ=32;FQ=24.0321;PV4=0.111406,0.000620723,1,1 GT:PL 0/1:51,0,255
Scaffold_1 821040 . A T 225.009 PASS DP=258;VDB=4.47841e-20;SGB=-0.693147;RPB=0.534036;MQB=0.00151716;MQSB=0.0275676;BQB=0.282807;MQ0F=0.170543;AF1=0.5;AC1=1;DP4=46,26,52,18;MQ=33;FQ=225.007;PV4=0.206568,0.0796146,1,1 GT:PL 0/1:255,0,255
Scaffold_1 821051 . T C 64.0073 PASS DP=282;VDB=1.52355e-08;SGB=-0.693139;RPB=0.241133;MQB=0.747205;MQSB=0.0395145;BQB=0.601649;MQ0F=0.170213;AF1=0.5;AC1=1;DP4=88,41,23,13;MQ=33;FQ=67.0155;PV4=0.689035,0.187614,0.18726,1 GT:PL 0/1:94,0,255
Scaffold_1 821053 . C T 225.009 PASS DP=282;VDB=3.14649e-16;SGB=-0.693147;RPB=0.887014;MQB=0.293113;MQSB=0.0731597;BQB=0.766857;MQ0F=0.170213;AF1=0.5;AC1=1;DP4=45,23,68,27;MQ=33;FQ=225.007;PV4=0.493893,0.119243,1,0.216993 GT:PL 0/1:255,0,255
Scaffold_1 821054 . A C 225.009 PASS DP=289;VDB=3.65951e-18;SGB=-0.693147;RPB=0.955921;MQB=0.0152263;MQSB=0.225138;BQB=0.16151;MQ0F=0.16955;AF1=0.5;AC1=1;DP4=71,36,43,16;MQ=33;FQ=225.007;PV4=0.48471,0.00585333,1,1 GT:PL 0/1:255,0,255
Scaffold_1 821060 . A C 155.008 PASS DP=311;VDB=1.21501e-11;SGB=-0.693147;RPB=0.0382034;MQB=0.0228523;MQSB=0.335463;BQB=0.961689;MQ0F=0.189711;AF1=0.5;AC1=1;DP4=81,39,38,18;MQ=33;FQ=158.017;PV4=1,1,0.0015453,1 GT:PL 0/1:185,0,255
Scaffold_1 821068 . G A 225.009 PASS DP=325;VDB=3.43596e-26;SGB=-0.693147;RPB=0.410379;MQB=0.947891;MQSB=0.555083;BQB=0.00439887;MQ0F=0.206154;AF1=0.5;AC1=1;DP4=24,16,99,50;MQ=32;FQ=96.0159;PV4=0.460064,1,0.343718,1 GT:PL 0/1:255,0,123
Scaffold_1 821164 . T C 194.144 PASS DP=59;VDB=0.000635138;SGB=-0.693144;RPB=0.607464;MQB=0.464241;MQSB=0.596777;BQB=0.663367;MQ0F=0.118644;AF1=0.516288;AC1=1;DP4=3,2,10,29;MQ=28;FQ=-15.1212;PV4=0.144052,0.347921,0.143895,1 GT:PL 0/1:224,0,12
Scaffold_1 821173 . A C 191.265 PASS DP=54;VDB=9.50936e-05;SGB=-0.693132;RPB=0.371495;MQB=0.957686;MQSB=0.996534;BQB=0.861468;MQ0F=0.12963;AF1=1;AC1=2;DP4=2,3,7,27;MQ=30;FQ=-41.9862;PV4=0.571616,1,1,1 GT:PL 1/1:224,15,0
Scaffold_1 821181 . G A 186.999 PASS DP=39;VDB=1.32769e-06;SGB=-0.69311;RPB=0.387097;MQB=0.870968;MQSB=0.870254;BQB=0.967742;MQ0F=0.179487;AF1=1;AC1=2;DP4=0,2,5,26;MQ=27;FQ=-73.9863;PV4=1,1,1,1 GT:PL 1/1:220,47,0
Scaffold_1 821208 . C A 129.008 PASS DP=27;VDB=0.000629224;SGB=-0.689466;RPB=1;MQB=1;MQSB=0.940565;BQB=0.247811;MQ0F=0.185185;AF1=0.500005;AC1=1;DP4=3,4,3,13;MQ=25;FQ=20.058;PV4=0.318494,1,1,1 GT:PL 0/1:159,0,47
Scaffold_1 821551 . T C 46.0072 PASS DP=28;VDB=0.9428;SGB=-0.636426;RPB=0.695312;MQB=0.31698;MQSB=0.985816;BQB=0.470358;MQ0F=0.25;AF1=0.5;AC1=1;DP4=6,0,4,3;MQ=39;FQ=49.0153;PV4=0.192308,0.040484,0.0329806,1 GT:PL 0/1:76,0,146
Scaffold_1 821598 . A C 151.008 PASS DP=40;VDB=7.84851e-06;SGB=-0.676189;RPB=0.203355;MQB=0.0383179;MQSB=0.801556;BQB=0.0859022;MQ0F=0.325;AF1=0.5;AC1=1;DP4=6,6,11,0;MQ=32;FQ=48.0153;PV4=0.01373,1,1,1 GT:PL 0/1:181,0,75
Scaffold_1 821601 . A T 49.0072 PASS DP=40;VDB=0.0230738;SGB=-0.590765;RPB=0.919406;MQB=0.513061;MQSB=0.819936;BQB=0.513061;MQ0F=0.325;AF1=0.5;AC1=1;DP4=14,4,3,2;MQ=30;FQ=52.0153;PV4=0.575619,0.140227,1,1 GT:PL 0/1:79,0,162
Scaffold_1 821611 . G T 57.0073 PASS DP=40;VDB=0.0299925;SGB=-0.590765;RPB=0.642786;MQB=0.478385;MQSB=0.993905;BQB=0.73572;MQ0F=0.3;AF1=0.5;AC1=1;DP4=12,5,4,1;MQ=31;FQ=60.0154;PV4=1,0.205057,1,1 GT:PL 0/1:87,0,185
Scaffold_1 821616 . G A 24.0241 PASS DP=38;VDB=0.014407;SGB=-0.556411;RPB=0.722624;MQB=0.798036;MQSB=0.201035;BQB=0.937845;MQ0F=0.263158;AF1=0.499999;AC1=1;DP4=13,4,4,0;MQ=31;FQ=27.0236;PV4=0.54553,1,1,1 GT:PL 0/1:54,0,186
Scaffold_1 821620 . C T 71.0074 PASS DP=35;VDB=0.00296109;SGB=-0.590765;RPB=0.948854;MQB=0.165122;MQSB=0.83527;BQB=0.962163;MQ0F=0.257143;AF1=0.5;AC1=1;DP4=11,3,4,1;MQ=30;FQ=74.0153;PV4=1,0.374203,1,1 GT:PL 0/1:101,0,143
Scaffold_1 822423 . C T 109.008 PASS DP=18;VDB=0.000959055;SGB=-0.616816;RPB=0.950952;MQB=0.891517;MQSB=0.888889;BQB=0.683497;MQ0F=0.0555556;AF1=0.5;AC1=1;DP4=3,2,6,0;MQ=44;FQ=99.7502;PV4=0.181818,1,1,0.103382 GT:PL 0/1:139,0,127
Scaffold_1 822432 . T C 59.0073 PASS DP=30;VDB=0.303109;SGB=-0.556411;RPB=0.145151;MQB=0.843173;MQSB=0.644941;BQB=0.28117;MQ0F=0.133333;AF1=0.5;AC1=1;DP4=10,4,2,2;MQ=42;FQ=62.0154;PV4=0.568627,0.0393206,1,1 GT:PL 0/1:89,0,236
Scaffold_1 822501 . A G 225.009 PASS DP=73;VDB=0.00532137;SGB=-0.693132;RPB=0.989249;MQB=0.751351;MQSB=0.951097;BQB=0.945094;MQ0F=0.0684932;AF1=0.5;AC1=1;DP4=4,1,26,8;MQ=42;FQ=50.0153;PV4=1,1,0.256649,0.245288 GT:PL 0/1:255,0,77
Scaffold_1 822508 . C T 44.0073 PASS DP=75;VDB=0.192892;SGB=-0.636426;RPB=0.987253;MQB=0.973589;MQSB=0.996434;BQB=0.0341843;MQ0F=0.04;AF1=0.5;AC1=1;DP4=27,6,5,2;MQ=43;FQ=47.0153;PV4=0.611151,0.00122463,0.466598,1 GT:PL 0/1:74,0,255
Scaffold_1 822518 . A T 147.008 PASS DP=85;VDB=0.010438;SGB=-0.676189;RPB=0.951019;MQB=0.946965;MQSB=0.625216;BQB=0.999651;MQ0F=0.0823529;AF1=0.5;AC1=1;DP4=26,8,9,2;MQ=39;FQ=150.017;PV4=1,0.471825,1,1 GT:PL 0/1:177,0,255
Scaffold_1 822534 . C A 65.0073 PASS DP=75;VDB=0.146847;SGB=-0.651104;RPB=0.664164;MQB=0.41165;MQSB=0.443252;BQB=0.018276;MQ0F=0.12;AF1=0.5;AC1=1;DP4=28,5,4,4;MQ=39;FQ=68.0155;PV4=0.0544096,0.000267202,1,1 GT:PL 0/1:95,0,255
Scaffold_1 822545 . G A 114.008 PASS DP=66;VDB=0.00972359;SGB=-0.670168;RPB=0.988935;MQB=0.828574;MQSB=0.545545;BQB=0.167769;MQ0F=0.121212;AF1=0.5;AC1=1;DP4=23,5,9,1;MQ=39;FQ=117.016;PV4=1,0.00758972,1,1 GT:PL 0/1:144,0,255
Scaffold_1 822567 . A G 222.974 PASS DP=38;VDB=3.98072e-05;SGB=-0.69168;RPB=0.789474;MQB=0.789474;MQSB=0.121895;BQB=0.131579;MQ0F=0.0526316;AF1=1;AC1=2;DP4=1,1,13,6;MQ=40;FQ=-35.9869;PV4=1,1,0.318724,0.143788 GT:PL 1/1:255,9,0
Scaffold_1 822573 . T A 23.0285 PASS DP=33;VDB=0.121629;SGB=-0.511536;RPB=0.994413;MQB=0.260295;MQSB=0.662613;BQB=0.759945;MQ0F=0.0606061;AF1=0.499999;AC1=1;DP4=11,6,3,0;MQ=41;FQ=26.0258;PV4=0.521053,0.454708,1,1 GT:PL 0/1:53,0,255
Scaffold_1 822599 . C T 105.008 PASS DP=13;VDB=0.175312;SGB=-0.616816;RPB=0.783809;MQB=0.727822;MQSB=0.733186;BQB=0.783809;MQ0F=0;AF1=0.5;AC1=1;DP4=1,3,2,4;MQ=35;FQ=37.016;PV4=1,0.243021,1,0.42941 GT:PL 0/1:135,0,64
Scaffold_1 822600 . G A 88.0076 PASS DP=13;VDB=0.149847;SGB=-0.616816;RPB=0.475476;MQB=0.8618;MQSB=0.716531;BQB=0.8618;MQ0F=0;AF1=0.5;AC1=1;DP4=2,3,1,5;MQ=34;FQ=60.012;PV4=0.545455,1,1,1 GT:PL 0/1:118,0,87
Scaffold_1 822609 . C T 66.0074 PASS DP=10;VDB=0.202231;SGB=-0.556411;RPB=0.487298;MQB=0.649731;MQSB=0.809011;BQB=0.406082;MQ0F=0;AF1=0.5;AC1=1;DP4=2,3,1,3;MQ=32;FQ=56.7497;PV4=1,1,1,1 GT:PL 0/1:96,0,84
Scaffold_1 822625 . T C 41.9723 PASS DP=3;VDB=0.0279572;SGB=-0.511536;MQ0F=0;AF1=1;AC1=2;DP4=0,0,0,3;MQ=33;FQ=-35.9869 GT:PL 1/1:74,9,0
Scaffold_1 934798 . G A 29.0365 PASS DP=8;VDB=0.0023421;SGB=-0.651104;MQSB=0.833333;MQ0F=0.125;AF1=1;AC1=2;DP4=0,0,6,2;MQ=14;FQ=-50.986 GT:PL 1/1:62,24,0
Scaffold_1 938111 . G A 11.3381 PASS DP=11;VDB=0.26;SGB=-0.453602;RPB=0.555556;MQB=0;MQSB=0.442128;BQB=0.666667;MQ0F=0;AF1=0.49998;AC1=1;DP4=2,7,2,0;MQ=57;FQ=14.1838;PV4=0.109091,1,0,1 GT:PL 0/1:41,0,213
Scaffold_1 938154 . C T 12.272 PASS DP=10;VDB=0.26;SGB=-0.453602;RPB=0.125;MQB=0;MQSB=0.523791;BQB=0.9375;MQ0F=0;AF1=0.499984;AC1=1;DP4=3,5,2,0;MQ=57;FQ=15.1496;PV4=0.444444,1,0,0.0243307 GT:PL 0/1:42,0,208
Scaffold_1 938160 . C A 17.0924 PASS DP=11;VDB=0.26;SGB=-0.453602;RPB=0.142857;MQB=0;MQSB=0.487298;BQB=0.857143;MQ0F=0;AF1=0.499995;AC1=1;DP4=2,5,2,0;MQ=56;FQ=20.058;PV4=0.166667,1,0,0.06909 GT:PL 0/1:47,0,187
Scaffold_1 939328 . T C 13.2188 PASS DP=8;VDB=0.707536;SGB=-0.511536;RPB=0.810265;MQB=0.405132;MQSB=0.810265;BQB=0.810265;MQ0F=0.125;AF1=0.499987;AC1=1;DP4=2,2,2,1;MQ=53;FQ=16.1222;PV4=1,0.142795,0.0652865,1 GT:PL 0/1:43,0,130
Scaffold_1 939330 . G C 15.1417 PASS DP=8;VDB=0.71601;SGB=-0.511536;RPB=0.900802;MQB=0.450401;MQSB=0.992367;BQB=0.900802;MQ0F=0.125;AF1=0.499992;AC1=1;DP4=2,3,2,1;MQ=54;FQ=18.0829;PV4=1,0.362302,0.0419323,1 GT:PL 0/1:45,0,146
Scaffold_1 939358 . C A 24.0241 PASS DP=9;VDB=0.690245;SGB=-0.511536;RPB=0.924584;MQB=0.809011;MQSB=0.89338;BQB=0.809011;MQ0F=0.111111;AF1=0.499999;AC1=1;DP4=3,3,2,1;MQ=57;FQ=27.0236;PV4=1,1,0.0852353,1 GT:PL 0/1:54,0,179
Scaffold_1 939375 . G C 14.176 PASS DP=10;VDB=0.690245;SGB=-0.511536;RPB=0.916482;MQB=0.733186;MQSB=0.857112;BQB=0.916482;MQ0F=0.1;AF1=0.49999;AC1=1;DP4=3,4,2,1;MQ=57;FQ=17.1004;PV4=1,0.454293,0.0664005,1 GT:PL 0/1:44,0,191