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Scaffold_1 26483 . T G 13.2188 PASS DP=35;VDB=0.270412;SGB=-0.662043;RPB=0.896555;MQB=0.998791;MQSB=0.500963;BQB=0.906646;MQ0F=0.4;AF1=0.499987;AC1=1;DP4=3,16,3,6;MQ=20;FQ=16.1222;PV4=0.351839,0.166401,0.418377,0.462814 GT:PL 0/1:43,0,111
Scaffold_1 47042 . C A 22.0341 PASS DP=8;VDB=0.02;SGB=-0.453602;RPB=0.666667;MQB=0.666667;MQSB=0.0833333;BQB=0.833333;MQ0F=0;AF1=0.499998;AC1=1;DP4=2,4,0,2;MQ=48;FQ=25.0286;PV4=1,1,0.395734,1 GT:PL 0/1:52,0,176
Scaffold_1 48029 . C A 13.2188 PASS DP=12;VDB=0.02;SGB=-0.453602;RPB=0.888889;MQB=0.666667;MQSB=0.666667;BQB=0.666667;MQ0F=0;AF1=0.499987;AC1=1;DP4=2,7,0,2;MQ=56;FQ=16.1222;PV4=1,1,1,1 GT:PL 0/1:43,0,210
Scaffold_1 49689 . G A 131.066 PASS DP=8;VDB=0.759801;SGB=-0.636426;MQ0F=0;AF1=1;AC1=2;DP4=0,0,0,7;MQ=52;FQ=-47.986 GT:PL 1/1:164,21,0
Scaffold_1 49701 . A G 110.264 PASS DP=6;VDB=0.277213;SGB=-0.590765;MQ0F=0;AF1=1;AC1=2;DP4=0,0,0,5;MQ=49;FQ=-41.9862 GT:PL 1/1:143,15,0
Scaffold_1 49770 . T C 59.0073 PASS DP=5;VDB=0.411594;SGB=-0.511536;RPB=0;MQB=0;MQSB=0;BQB=0.5;MQ0F=0;AF1=0.500001;AC1=1;DP4=2,0,0,3;MQ=51;FQ=26.0247;PV4=0.1,1,0.0115324,0.130028 GT:PL 0/1:89,0,53
Scaffold_1 49797 . C T 35.0083 PASS DP=6;VDB=0.868052;SGB=-0.511536;RPB=0.861511;MQB=0.28717;MQSB=0.125;BQB=0.861511;MQ0F=0;AF1=0.5;AC1=1;DP4=3,0,1,2;MQ=48;FQ=37.9615;PV4=0.4,0.241453,0.0322557,0.217125 GT:PL 0/1:65,0,84
Scaffold_1 49800 . T C 35.0083 PASS DP=6;VDB=0.868052;SGB=-0.511536;RPB=0.861511;MQB=0.28717;MQSB=0.125;BQB=0.861511;MQ0F=0;AF1=0.5;AC1=1;DP4=3,0,1,2;MQ=48;FQ=37.9081;PV4=0.4,0.389411,0.0322557,0.18695 GT:PL 0/1:65,0,81
Scaffold_1 49867 . T C 78.0086 PASS DP=8;VDB=0.0765947;SGB=-0.590765;RPB=0.8;MQB=0.8;MQSB=1;BQB=0.7;MQ0F=0;AF1=0.500125;AC1=1;DP4=2,0,4,1;MQ=46;FQ=6.98503;PV4=1,1,1,1 GT:PL 0/1:108,0,33
Scaffold_1 49928 . C T 120.133 PASS DP=7;VDB=0.799073;SGB=-0.616816;MQ0F=0;AF1=1;AC1=2;DP4=0,0,6,0;MQ=54;FQ=-44.9861 GT:PL 1/1:153,18,0
Scaffold_1 49940 . T C 106.264 PASS DP=6;VDB=0.831179;SGB=-0.590765;MQ0F=0;AF1=1;AC1=2;DP4=0,0,5,0;MQ=56;FQ=-41.9862 GT:PL 1/1:139,15,0
Scaffold_1 50053 . T C 100.008 PASS DP=9;VDB=0.521429;SGB=-0.590765;RPB=0.900802;MQB=0.450401;MQSB=0.900802;BQB=0.750668;MQ0F=0;AF1=0.5;AC1=1;DP4=0,3,3,2;MQ=42;FQ=50.0153;PV4=0.196429,0.167891,1,0.240809 GT:PL 0/1:130,0,77
Scaffold_1 50055 . A G 88.0076 PASS DP=9;VDB=0.585652;SGB=-0.556411;RPB=0.868321;MQB=0.372138;MQSB=0.750668;BQB=0.868321;MQ0F=0;AF1=0.5;AC1=1;DP4=0,4,3,1;MQ=39;FQ=61.0111;PV4=0.142857,1,1,0.177959 GT:PL 0/1:118,0,88
Scaffold_1 50086 . T G 128.008 PASS DP=11;VDB=0.697961;SGB=-0.616816;RPB=0.895781;MQB=0.167959;MQSB=0.916482;BQB=0.783809;MQ0F=0;AF1=0.5;AC1=1;DP4=0,4,3,3;MQ=43;FQ=56.0154;PV4=0.2,1,1,0.161 GT:PL 0/1:158,0,83
Scaffold_1 50147 . C A 21.0411 PASS DP=11;VDB=0.045681;SGB=-0.511536;RPB=0.184981;MQB=0.0497871;MQSB=0.361741;BQB=1;MQ0F=0;AF1=0.499998;AC1=1;DP4=4,4,0,3;MQ=50;FQ=24.0321;PV4=0.236364,1,0.00243261,0.0691624 GT:PL 0/1:51,0,207
Scaffold_1 51022 . C T 139.134 PASS DP=7;VDB=0.622148;SGB=-0.616816;MQSB=1;MQ0F=0;AF1=1;AC1=2;DP4=0,0,5,1;MQ=40;FQ=-44.9861 GT:PL 1/1:172,18,0
Scaffold_1 51025 . C T 139.134 PASS DP=7;VDB=0.724522;SGB=-0.616816;MQSB=1;MQ0F=0;AF1=1;AC1=2;DP4=0,0,5,1;MQ=40;FQ=-44.9861 GT:PL 1/1:172,18,0
Scaffold_1 51083 . A G 210.026 PASS DP=13;VDB=0.626886;SGB=-0.676189;RPB=1;MQB=1;MQSB=0.397295;BQB=1;MQ0F=0.230769;AF1=1;AC1=2;DP4=0,1,8,3;MQ=37;FQ=-51.986;PV4=0.333333,0.389363,1,0.294305 GT:PL 1/1:243,25,0
Scaffold_1 51097 . C T 174.211 PASS DP=12;VDB=0.0759488;SGB=-0.662043;RPB=0.555556;MQB=0.111111;MQSB=0.297172;BQB=0.833333;MQ0F=0.333333;AF1=1;AC1=2;DP4=0,2,6,3;MQ=34;FQ=-42.9861;PV4=0.181818,1,1,1 GT:PL 1/1:207,16,0
Scaffold_1 51149 . A G 222.135 PASS DP=15;VDB=0.771088;SGB=-0.680642;RPB=0.846482;MQB=0.0586635;MQSB=0.778801;BQB=0.556584;MQ0F=0.266667;AF1=1;AC1=2;DP4=0,3,6,6;MQ=38;FQ=-44.9861;PV4=0.228571,1,1,0.173352 GT:PL 1/1:255,18,0
Scaffold_1 51194 . T C 222.006 PASS DP=14;VDB=0.971763;SGB=-0.683931;RPB=1;MQB=1;MQSB=0.981425;BQB=1;MQ0F=0.142857;AF1=1;AC1=2;DP4=0,1,6,7;MQ=48;FQ=-57.9861;PV4=1,0.259611,1,0.178471 GT:PL 1/1:255,31,0
Scaffold_1 56623 . T C 222.008 PASS DP=10;VDB=0.529323;SGB=-0.670168;MQSB=1.00775;MQ0F=0;AF1=1;AC1=2;DP4=0,0,6,4;MQ=60;FQ=-56.9861 GT:PL 1/1:255,30,0
Scaffold_1 56749 . G C 174.033 PASS DP=10;VDB=0.342481;SGB=-0.651104;MQSB=0.900802;MQ0F=0;AF1=1;AC1=2;DP4=0,0,5,3;MQ=60;FQ=-50.986 GT:PL 1/1:207,24,0
Scaffold_1 56843 . A G 219.016 PASS DP=13;VDB=0.860992;SGB=-0.662043;MQSB=0.924584;MQ0F=0;AF1=1;AC1=2;DP4=0,0,6,3;MQ=60;FQ=-53.9861 GT:PL 1/1:252,27,0
Scaffold_1 57322 . T G 222 PASS DP=13;VDB=0.537189;SGB=-0.683931;MQSB=0.961166;MQ0F=0;AF1=1;AC1=2;DP4=0,0,7,6;MQ=60;FQ=-65.9862 GT:PL 1/1:255,39,0
Scaffold_1 57323 . G T 222 PASS DP=13;VDB=0.540608;SGB=-0.683931;MQSB=0.961166;MQ0F=0;AF1=1;AC1=2;DP4=0,0,7,6;MQ=60;FQ=-65.9862 GT:PL 1/1:255,39,0
Scaffold_1 68810 . C A 25.0205 PASS DP=7;VDB=0.02;SGB=-0.453602;RPB=0.8;MQB=1;MQSB=1;BQB=0.8;MQ0F=0;AF1=0.499999;AC1=1;DP4=2,3,0,2;MQ=60;FQ=28.0219;PV4=1,1,1,1 GT:PL 0/1:55,0,155
Scaffold_1 73468 . G T 16.1143 PASS DP=10;VDB=0.02;SGB=-0.453602;RPB=0.25;MQB=1;MQSB=0.916482;BQB=0.625;MQ0F=0;AF1=0.499994;AC1=1;DP4=7,1,0,2;MQ=60;FQ=19.069;PV4=0.0666667,1,1,0.244264 GT:PL 0/1:46,0,177
Scaffold_1 75470 . T G 64.0073 PASS DP=17;VDB=0.92749;SGB=-0.556411;RPB=0.872525;MQB=0.808101;MQSB=0.941512;BQB=0.463395;MQ0F=0;AF1=0.5;AC1=1;DP4=4,7,4,0;MQ=43;FQ=67.0155;PV4=0.0769231,1,1,0.0698634 GT:PL 0/1:94,0,235
Scaffold_1 75490 . G A 46.0072 PASS DP=17;VDB=0.748679;SGB=-0.511536;RPB=0.795669;MQB=0.914584;MQSB=0.935229;BQB=0.400803;MQ0F=0;AF1=0.5;AC1=1;DP4=2,8,3,0;MQ=45;FQ=49.0153;PV4=0.034965,1,1,1 GT:PL 0/1:76,0,209
Scaffold_1 75500 . C T 48.0072 PASS DP=15;VDB=0.535497;SGB=-0.556411;RPB=0.826565;MQB=1;MQSB=0.935229;BQB=0.826565;MQ0F=0;AF1=0.5;AC1=1;DP4=2,7,3,1;MQ=45;FQ=51.0153;PV4=0.216783,1,1,1 GT:PL 0/1:78,0,192
Scaffold_1 75518 . C T 25.0205 PASS DP=11;VDB=0.42;SGB=-0.453602;RPB=0.5;MQB=0.75;MQSB=0.916482;BQB=0.25;MQ0F=0;AF1=0.499999;AC1=1;DP4=1,7,2,0;MQ=46;FQ=28.0219;PV4=0.0666667,1,1,1 GT:PL 0/1:55,0,171
Scaffold_1 75521 . T C 35.0083 PASS DP=12;VDB=0.645206;SGB=-0.511536;RPB=0.263597;MQB=0.920044;MQSB=0.763675;BQB=0.954207;MQ0F=0;AF1=0.5;AC1=1;DP4=1,7,3,0;MQ=45;FQ=38.0158;PV4=0.0242424,1,0.436903,0.0980105 GT:PL 0/1:65,0,180
Scaffold_1 75630 . G T 110.008 PASS DP=12;VDB=0.12166;SGB=-0.616816;RPB=0.0847072;MQB=0.372712;MQSB=0.898672;BQB=0.372712;MQ0F=0;AF1=0.5;AC1=1;DP4=2,4,1,5;MQ=55;FQ=113.013;PV4=1,0.0413987,0.0294014,1 GT:PL 0/1:140,0,171
Scaffold_1 80364 . G A 102.008 PASS DP=11;VDB=0.41447;SGB=-0.616816;RPB=0.950952;MQB=0.950952;MQSB=0.964642;BQB=0.0891517;MQ0F=0;AF1=0.5;AC1=1;DP4=1,4,6,0;MQ=40;FQ=89.8806;PV4=0.0151515,1,1,1 GT:PL 0/1:132,0,117
Scaffold_1 80399 . T C 82.0076 PASS DP=10;VDB=0.316324;SGB=-0.590765;RPB=0.761877;MQB=0.857112;MQSB=0.857112;BQB=0.761877;MQ0F=0;AF1=0.5;AC1=1;DP4=0,5,5,0;MQ=42;FQ=78.0424;PV4=0.00793651,1,0.279465,1 GT:PL 0/1:112,0,106
Scaffold_1 80487 . C T 133.008 PASS DP=12;VDB=0.961777;SGB=-0.616816;RPB=0.564628;MQB=0.891517;MQSB=0.891517;BQB=0.950952;MQ0F=0;AF1=0.5;AC1=1;DP4=2,3,4,2;MQ=54;FQ=111.002;PV4=0.5671,1,0.468596,0.449964 GT:PL 0/1:163,0,138
Scaffold_1 80517 . A C 206.009 PASS DP=15;VDB=0.0207625;SGB=-0.670168;RPB=0.309786;MQB=0.859096;MQSB=0.119226;BQB=0.472367;MQ0F=0;AF1=0.5;AC1=1;DP4=3,2,3,7;MQ=52;FQ=104.016;PV4=0.328671,1,0.217105,0.445006 GT:PL 0/1:236,0,131
Scaffold_1 81045 . G C 18.0749 PASS DP=12;VDB=0.138245;SGB=-0.556411;RPB=0.924449;MQB=0.643095;MQSB=0.950952;BQB=0.562708;MQ0F=0.0833333;AF1=0.499996;AC1=1;DP4=3,4,2,2;MQ=36;FQ=21.0492;PV4=1,1,0.135512,1 GT:PL 0/1:48,0,142
Scaffold_1 81441 . T C 89.0077 PASS DP=17;VDB=0.0663189;SGB=-0.616816;RPB=0.686279;MQB=0.994135;MQSB=0.924401;BQB=1;MQ0F=0;AF1=0.5;AC1=1;DP4=6,4,5,1;MQ=54;FQ=92.0158;PV4=0.587912,0.348857,0.398667,1 GT:PL 0/1:119,0,241
Scaffold_1 81934 . G A 33.0091 PASS DP=15;VDB=0.784982;SGB=-0.590765;RPB=0.829029;MQB=0.0189207;MQSB=0.184981;BQB=0.934728;MQ0F=0;AF1=0.5;AC1=1;DP4=5,5,0,5;MQ=45;FQ=36.0162;PV4=0.100899,1,0.000768308,0.141675 GT:PL 0/1:63,0,233
Scaffold_1 82001 . A C 65.0073 PASS DP=15;VDB=0.712859;SGB=-0.616816;RPB=0.961166;MQB=0.194278;MQSB=0.604728;BQB=0.899815;MQ0F=0;AF1=0.5;AC1=1;DP4=4,3,0,6;MQ=48;FQ=68.0155;PV4=0.0699301,0.188687,0.0128078,1 GT:PL 0/1:95,0,201
Scaffold_1 100502 . C A 16.1143 PASS DP=10;VDB=0.02;SGB=-0.453602;RPB=0.5;MQB=1;MQSB=0.916482;BQB=0.5;MQ0F=0;AF1=0.499994;AC1=1;DP4=3,5,0,2;MQ=60;FQ=19.069;PV4=1,1,1,1 GT:PL 0/1:46,0,212
Scaffold_1 107790 . G A 20.0499 PASS DP=7;VDB=0.607612;SGB=-0.511536;RPB=0.810265;MQB=0.202566;MQSB=0.202566;BQB=1.01283;MQ0F=0;AF1=0.499997;AC1=1;DP4=1,3,3,0;MQ=50;FQ=23.0366;PV4=0.142857,0.422836,0.0129285,1 GT:PL 0/1:50,0,116
Scaffold_1 107791 . A G 24.0241 PASS DP=7;VDB=0.607612;SGB=-0.511536;RPB=0.810265;MQB=0.202566;MQSB=0.202566;BQB=0.810265;MQ0F=0;AF1=0.499999;AC1=1;DP4=1,3,3,0;MQ=50;FQ=27.0236;PV4=0.142857,0.142795,0.0129285,1 GT:PL 0/1:54,0,125
Scaffold_1 107800 . C T 24.0241 PASS DP=8;VDB=0.598038;SGB=-0.511536;RPB=0.810265;MQB=0.202566;MQSB=0.202566;BQB=0.405132;MQ0F=0;AF1=0.499999;AC1=1;DP4=1,3,3,0;MQ=50;FQ=27.0236;PV4=0.142857,0.0311762,0.0129285,1 GT:PL 0/1:54,0,125
Scaffold_1 108396 . A T 143.34 PASS DP=12;VDB=0.577201;SGB=-0.670168;RPB=1;MQB=1;MQSB=0.888889;BQB=1;MQ0F=0.0833333;AF1=0.543032;AC1=1;DP4=1,0,1,9;MQ=44;FQ=-19.0401;PV4=0.181818,1,0.0805591,1 GT:PL 0/1:173,0,8
Scaffold_1 108403 . T C 141.177 PASS DP=13;VDB=0.74989;SGB=-0.662043;RPB=1;MQB=1;MQSB=0.875;BQB=1;MQ0F=0.0769231;AF1=0.520679;AC1=1;DP4=1,0,1,8;MQ=45;FQ=-16.0937;PV4=0.2,1,0.0981519,0.283673 GT:PL 0/1:171,0,11
Scaffold_1 108413 . A T 155.199 PASS DP=14;VDB=0.885039;SGB=-0.680642;RPB=1;MQB=1;MQSB=0.818182;BQB=1;MQ0F=0.0714286;AF1=0.730437;AC1=1;DP4=1,0,1,11;MQ=47;FQ=-24.9994;PV4=0.153846,1,0.133904,0.292845 GT:PL 0/1:184,0,2
Scaffold_1 108415 . T G 157.199 PASS DP=14;VDB=0.885039;SGB=-0.680642;RPB=1;MQB=1;MQSB=0.818182;BQB=1;MQ0F=0.0714286;AF1=0.730437;AC1=1;DP4=1,0,1,11;MQ=47;FQ=-24.9994;PV4=0.153846,1,0.133904,0.294578 GT:PL 0/1:186,0,2
Scaffold_1 108424 . G C 131.129 PASS DP=14;VDB=0.799441;SGB=-0.683931;RPB=1;MQB=1;MQSB=1;BQB=1;MQ0F=0.0714286;AF1=1;AC1=2;DP4=1,0,0,13;MQ=48;FQ=-27.9926;PV4=0.0714286,0.274313,0.188053,0.277728 GT:PL 1/1:160,1,0
Scaffold_1 108427 . T C 129.199 PASS DP=14;VDB=0.830975;SGB=-0.680642;RPB=1;MQB=1;MQSB=1;BQB=1;MQ0F=0.0714286;AF1=0.730437;AC1=1;DP4=1,0,0,12;MQ=49;FQ=-24.9994;PV4=0.0769231,0.323609,0.205906,0.258591 GT:PL 0/1:158,0,2
Scaffold_1 108429 . G A 96.6453 PASS DP=14;VDB=0.665619;SGB=-0.676189;RPB=1;MQB=1;MQSB=1;BQB=1;MQ0F=0.0714286;AF1=0.593902;AC1=1;DP4=1,0,0,11;MQ=45;FQ=-22.013;PV4=0.0833333,0.0870477,0.151156,0.28548 GT:PL 0/1:126,0,5
Scaffold_1 108686 . A C 11.3381 PASS DP=8;VDB=0.88;SGB=-0.453602;RPB=0.5;MQB=0;MQSB=0.900802;BQB=0.916667;MQ0F=0;AF1=0.49998;AC1=1;DP4=2,4,1,1;MQ=55;FQ=14.1838;PV4=1,1,0.000118872,0.445294 GT:PL 0/1:41,0,167
Scaffold_1 108690 . C T 14.176 PASS DP=7;VDB=0.88;SGB=-0.453602;RPB=0.6;MQB=0;MQSB=0.6;BQB=0.8;MQ0F=0;AF1=0.49999;AC1=1;DP4=1,4,1,1;MQ=54;FQ=17.1004;PV4=1,1,0.000480262,0.384662 GT:PL 0/1:44,0,135
Scaffold_1 108700 . A C 11.3381 PASS DP=10;VDB=0.88;SGB=-0.453602;RPB=0.833333;MQB=0;MQSB=0.900802;BQB=0.583333;MQ0F=0;AF1=0.49998;AC1=1;DP4=2,4,1,1;MQ=55;FQ=14.1838;PV4=1,0.23888,0.000118872,1 GT:PL 0/1:41,0,183
Scaffold_1 108701 . A G 14.176 PASS DP=10;VDB=0.88;SGB=-0.453602;RPB=1;MQB=0;MQSB=0.810265;BQB=1;MQ0F=0;AF1=0.49999;AC1=1;DP4=2,3,1,1;MQ=54;FQ=17.1004;PV4=1,0.390524,0.000480262,1 GT:PL 0/1:44,0,163
Scaffold_1 108707 . C T 11.3381 PASS DP=10;VDB=0.88;SGB=-0.453602;RPB=0.833333;MQB=0;MQSB=0.900802;BQB=0.666667;MQ0F=0;AF1=0.49998;AC1=1;DP4=2,4,1,1;MQ=55;FQ=14.1838;PV4=1,0.462075,0.000118872,1 GT:PL 0/1:41,0,192
Scaffold_1 114963 . C A 38.0077 PASS DP=13;VDB=0.0221621;SGB=-0.511536;RPB=0.879351;MQB=1;MQSB=1;BQB=0.968368;MQ0F=0;AF1=0.5;AC1=1;DP4=8,2,0,3;MQ=60;FQ=41.0155;PV4=0.034965,1,1,1 GT:PL 0/1:68,0,220
Scaffold_1 115580 . G T 18.0749 PASS DP=4;VDB=0.02;SGB=-0.453602;RPB=0;MQB=1;MQSB=1;BQB=0.5;MQ0F=0;AF1=0.499996;AC1=1;DP4=1,1,0,2;MQ=60;FQ=20.881;PV4=1,0.211325,1,1 GT:PL 0/1:48,0,62
Scaffold_1 118361 . A G 14.176 PASS DP=10;VDB=0.6;SGB=-0.453602;RPB=0.875;MQB=0;MQSB=0.733186;BQB=0.75;MQ0F=0;AF1=0.49999;AC1=1;DP4=5,3,2,0;MQ=57;FQ=17.1004;PV4=1,1,0,1 GT:PL 0/1:44,0,214
Scaffold_1 118385 . T G 14.176 PASS DP=10;VDB=0.6;SGB=-0.453602;RPB=0.875;MQB=0;MQSB=0.733186;BQB=0.625;MQ0F=0;AF1=0.49999;AC1=1;DP4=5,3,2,0;MQ=57;FQ=17.1004;PV4=1,1,0,1 GT:PL 0/1:44,0,208
Scaffold_1 118388 . G A 16.1143 PASS DP=10;VDB=0.28399;SGB=-0.511536;RPB=0.916482;MQB=0.366593;MQSB=0.733186;BQB=0.916482;MQ0F=0;AF1=0.499994;AC1=1;DP4=4,3,3,0;MQ=57;FQ=19.069;PV4=0.475,0.42868,0.00506536,1 GT:PL 0/1:46,0,183
Scaffold_1 125394 . G A 12.272 PASS DP=20;VDB=0.27062;SGB=-0.556411;RPB=0.892087;MQB=0.0120216;MQSB=0.28276;BQB=0.933253;MQ0F=0;AF1=0.499984;AC1=1;DP4=5,9,4,0;MQ=55;FQ=15.1496;PV4=0.0823529,0.359767,1.33146e-13,1 GT:PL 0/1:42,0,255
Scaffold_1 125435 . C A 10.42 PASS DP=16;VDB=0.0221621;SGB=-0.511536;RPB=0.782349;MQB=0.0368832;MQSB=0.301194;BQB=0.12893;MQ0F=0;AF1=0.499975;AC1=1;DP4=3,8,3,0;MQ=55;FQ=13.2265;PV4=0.0549451,0.0165849,0,1 GT:PL 0/1:40,0,251
Scaffold_1 125522 . A G 12.272 PASS DP=11;VDB=0.0221621;SGB=-0.511536;RPB=0.184981;MQB=0.0497871;MQSB=0.655816;BQB=0.532481;MQ0F=0;AF1=0.499984;AC1=1;DP4=3,5,0,3;MQ=54;FQ=15.1496;PV4=0.490909,0.0892605,0,0.0121689 GT:PL 0/1:42,0,211
Scaffold_1 125525 . T G 18.0749 PASS DP=12;VDB=0.0221621;SGB=-0.511536;RPB=0.274945;MQB=0.0916482;MQSB=0.641538;BQB=0.824834;MQ0F=0;AF1=0.499996;AC1=1;DP4=3,4,0,3;MQ=53;FQ=21.0492;PV4=0.475,0.0999814,0,0.028447 GT:PL 0/1:48,0,201
Scaffold_1 125537 . A C 43.0073 PASS DP=15;VDB=0.0298006;SGB=-0.556411;RPB=0.180092;MQB=0.0211283;MQSB=0.898397;BQB=1;MQ0F=0;AF1=0.5;AC1=1;DP4=3,6,1,3;MQ=53;FQ=46.0153;PV4=1,0.208833,1.41299e-07,0.296374 GT:PL 0/1:73,0,223
Scaffold_1 125555 . G A 43.0073 PASS DP=16;VDB=0.0298006;SGB=-0.556411;RPB=0.826565;MQB=0.0211283;MQSB=0.623736;BQB=0.651439;MQ0F=0;AF1=0.5;AC1=1;DP4=5,4,1,3;MQ=53;FQ=46.0153;PV4=0.559441,1,1.41299e-07,1 GT:PL 0/1:73,0,229
Scaffold_1 125556 . T A 63.0073 PASS DP=16;VDB=0.0170667;SGB=-0.590765;RPB=0.686908;MQB=0.011109;MQSB=0.714506;BQB=0.686908;MQ0F=0;AF1=0.5;AC1=1;DP4=5,4,2,3;MQ=52;FQ=66.0155;PV4=1,0.148421,1.81364e-07,1 GT:PL 0/1:93,0,232
Scaffold_1 125564 . A G 89.0077 PASS DP=16;VDB=0.00740154;SGB=-0.616816;RPB=0.588086;MQB=0.00502104;MQSB=0.635221;BQB=0.963903;MQ0F=0;AF1=0.5;AC1=1;DP4=5,5,2,4;MQ=52;FQ=92.0158;PV4=0.632867,0.196673,6.37525e-09,1 GT:PL 0/1:119,0,251
Scaffold_1 125608 . C T 57.0073 PASS DP=12;VDB=0.0131987;SGB=-0.590765;RPB=0.356607;MQB=0.0297172;MQSB=0.297172;BQB=0.950952;MQ0F=0;AF1=0.5;AC1=1;DP4=4,2,1,4;MQ=49;FQ=60.0154;PV4=0.242424,0.219332,2.08793e-06,1 GT:PL 0/1:87,0,170
Scaffold_1 125662 . A G 18.0749 PASS DP=14;VDB=0.011063;SGB=-0.590765;RPB=0.0310726;MQB=0.0137638;MQSB=0.194278;BQB=0.105117;MQ0F=0;AF1=0.499996;AC1=1;DP4=6,2,1,4;MQ=51;FQ=21.0492;PV4=0.102564,0.00413305,8.78754e-08,0.0283145 GT:PL 0/1:48,0,200
Scaffold_1 125835 . A G 26.0177 PASS DP=6;VDB=0.66;SGB=-0.453602;RPB=0.125;MQB=0;MQSB=0.574341;BQB=0.75;MQ0F=0;AF1=0.499999;AC1=1;DP4=3,1,0,2;MQ=54;FQ=29.0205;PV4=0.4,1,0,0.300656 GT:PL 0/1:56,0,124
Scaffold_1 126624 . G A 28.0137 PASS DP=7;VDB=0.941105;SGB=-0.511536;RPB=0.405132;MQB=0.202566;MQSB=1;BQB=1.01283;MQ0F=0;AF1=0.5;AC1=1;DP4=3,1,3,0;MQ=50;FQ=31.0185;PV4=1,1,0.000695509,1 GT:PL 0/1:58,0,111
Scaffold_1 126672 . G A 15.1417 PASS DP=7;VDB=0.06;SGB=-0.453602;RPB=0.5;MQB=0;MQSB=1;BQB=0.75;MQ0F=0;AF1=0.499992;AC1=1;DP4=3,1,2,0;MQ=53;FQ=18.0829;PV4=1,0.316406,0.000442182,1 GT:PL 0/1:45,0,124
Scaffold_1 126733 . A G 27.0155 PASS DP=11;VDB=0.981488;SGB=-0.511536;RPB=0.716531;MQB=0.0497871;MQSB=0.655816;BQB=0.994805;MQ0F=0;AF1=0.499999;AC1=1;DP4=5,3,3,0;MQ=54;FQ=30.0194;PV4=0.490909,1,1.76208e-08,0.00602777 GT:PL 0/1:57,0,194
Scaffold_1 126856 . G A 28.0137 PASS DP=6;VDB=0.0221621;SGB=-0.511536;RPB=1;MQB=0;BQB=0.333333;MQ0F=0;AF1=0.5;AC1=1;DP4=0,2,0,3;MQ=46;FQ=29.2558;PV4=1,0.109551,0.030889,1 GT:PL 0/1:58,0,61
Scaffold_1 126872 . T C 29.0123 PASS DP=9;VDB=0.0249187;SGB=-0.511536;RPB=0.900802;MQB=0.150134;MQSB=1;BQB=0.600535;MQ0F=0;AF1=0.5;AC1=1;DP4=1,4,0,3;MQ=49;FQ=32.0178;PV4=1,1,0.0197602,1 GT:PL 0/1:59,0,117
Scaffold_1 126873 . G A 29.0123 PASS DP=9;VDB=0.0249187;SGB=-0.511536;RPB=0.900802;MQB=0.150134;MQSB=1;BQB=0.600535;MQ0F=0;AF1=0.5;AC1=1;DP4=1,4,0,3;MQ=49;FQ=32.0178;PV4=1,1,0.0197602,1 GT:PL 0/1:59,0,129
Scaffold_1 126889 . A G 13.2188 PASS DP=7;VDB=0.0279572;SGB=-0.511536;RPB=0.28717;MQB=0.28717;BQB=0.861511;MQ0F=0;AF1=0.499987;AC1=1;DP4=0,3,0,3;MQ=49;FQ=16.1189;PV4=1,0.30633,0.00986676,1 GT:PL 0/1:43,0,74
Scaffold_1 127183 . C A 10.42 PASS DP=8;VDB=0.0560361;SGB=-0.511536;RPB=0.450401;MQB=0.150134;MQSB=0.900802;BQB=0.900802;MQ0F=0;AF1=0.499975;AC1=1;DP4=3,2,2,1;MQ=48;FQ=13.2265;PV4=1,0.395869,0.00815623,1 GT:PL 0/1:40,0,131
Scaffold_1 127235 . G A 23.0285 PASS DP=9;VDB=0.0681597;SGB=-0.511536;RPB=0.202566;MQB=0.202566;MQSB=0.607698;BQB=0.810265;MQ0F=0;AF1=0.499999;AC1=1;DP4=1,3,2,1;MQ=49;FQ=26.0258;PV4=0.485714,1,0.005037,0.0314378 GT:PL 0/1:53,0,114
Scaffold_1 127241 . T A 29.0123 PASS DP=9;VDB=0.0681597;SGB=-0.511536;RPB=0.28717;MQB=0.28717;MQSB=0.25;BQB=0.861511;MQ0F=0;AF1=0.5;AC1=1;DP4=0,3,2,1;MQ=47;FQ=31.8827;PV4=0.4,1,0.0137099,0.0474348 GT:PL 0/1:59,0,74
Scaffold_1 127842 . A G 11.3381 PASS DP=12;VDB=0.591842;SGB=-0.556411;RPB=0.878264;MQB=0.0249144;MQSB=0.896474;BQB=0.98568;MQ0F=0;AF1=0.49998;AC1=1;DP4=4,4,3,1;MQ=52;FQ=14.1838;PV4=0.575758,0.276498,0.000126326,1 GT:PL 0/1:41,0,211
Scaffold_1 129436 . C T 14.176 PASS DP=5;VDB=0.28;SGB=-0.453602;RPB=0.5;MQB=0;MQSB=0.333333;BQB=0.666667;MQ0F=0;AF1=0.49999;AC1=1;DP4=1,2,2,0;MQ=51;FQ=17.1002;PV4=0.4,1,0.00171157,0.364147 GT:PL 0/1:44,0,89
Scaffold_1 129438 . C T 14.176 PASS DP=5;VDB=0.28;SGB=-0.453602;RPB=0.333333;MQB=0;MQSB=0.333333;BQB=1;MQ0F=0;AF1=0.49999;AC1=1;DP4=1,2,2,0;MQ=51;FQ=17.1004;PV4=0.4,1,0.00171157,0.355102 GT:PL 0/1:44,0,102
Scaffold_1 130217 . A G 59.0073 PASS DP=13;VDB=0.0205346;SGB=-0.556411;RPB=0.361741;MQB=0.0401934;MQSB=0.208021;BQB=0.643095;MQ0F=0;AF1=0.5;AC1=1;DP4=2,5,4,0;MQ=55;FQ=62.0154;PV4=0.0606061,0.25525,6.49971e-07,0.14219 GT:PL 0/1:89,0,201
Scaffold_1 130281 . C T 32.0097 PASS DP=18;VDB=0.251321;SGB=-0.511536;RPB=0.962269;MQB=0.0443614;MQSB=0.931779;BQB=0.25042;MQ0F=0;AF1=0.5;AC1=1;DP4=4,5,2,1;MQ=55;FQ=35.0165;PV4=1,1,0.00119137,1 GT:PL 0/1:62,0,247
Scaffold_1 130330 . T C 79.0075 PASS DP=17;VDB=0.0629862;SGB=-0.590765;RPB=0.6821;MQB=0.0194886;MQSB=0.94394;BQB=0.6821;MQ0F=0;AF1=0.5;AC1=1;DP4=4,3,4,1;MQ=53;FQ=82.0157;PV4=0.575758,1,0.00156206,1 GT:PL 0/1:109,0,207
Scaffold_1 130369 . C T 74.0075 PASS DP=9;VDB=0.0182837;SGB=-0.556411;RPB=0.124046;MQB=0.124046;MQSB=0.372138;BQB=0.62023;MQ0F=0;AF1=0.5;AC1=1;DP4=3,1,1,3;MQ=51;FQ=74.0053;PV4=0.485714,1,0.01405,0.00836022 GT:PL 0/1:104,0,104
Scaffold_1 130378 . C T 51.0072 PASS DP=11;VDB=0.968032;SGB=-0.590765;RPB=0.297172;MQB=0.0297172;MQSB=0.475476;BQB=0.297172;MQ0F=0;AF1=0.5;AC1=1;DP4=5,1,1,4;MQ=50;FQ=54.0153;PV4=0.0800866,1,0.0020373,0.168458 GT:PL 0/1:81,0,129
Scaffold_1 130388 . T G 37.0079 PASS DP=11;VDB=0.319981;SGB=-0.556411;RPB=0.924449;MQB=0.0401934;MQSB=0.442128;BQB=0.924449;MQ0F=0;AF1=0.5;AC1=1;DP4=6,1,1,3;MQ=52;FQ=40.0156;PV4=0.0878788,0.244779,0.00125351,0.469985 GT:PL 0/1:67,0,170
Scaffold_1 130402 . C T 46.0072 PASS DP=11;VDB=0.314313;SGB=-0.556411;RPB=0.763675;MQB=0.0401934;MQSB=0.442128;BQB=0.763675;MQ0F=0;AF1=0.5;AC1=1;DP4=6,1,1,3;MQ=52;FQ=49.0153;PV4=0.0878788,1,0.00125351,1 GT:PL 0/1:76,0,169
Scaffold_1 130422 . A G 48.0072 PASS DP=11;VDB=0.303109;SGB=-0.556411;RPB=1.00775;MQB=0.0559863;MQSB=0.559863;BQB=0.895781;MQ0F=0;AF1=0.5;AC1=1;DP4=5,1,1,3;MQ=51;FQ=51.0153;PV4=0.190476,1,0.00264215,1 GT:PL 0/1:78,0,154
Scaffold_1 130461 . A G 24.0241 PASS DP=8;VDB=0.0279572;SGB=-0.511536;RPB=0.900802;MQB=0.150134;MQSB=0.750668;BQB=0.600535;MQ0F=0;AF1=0.499999;AC1=1;DP4=4,1,1,2;MQ=51;FQ=27.0236;PV4=0.464286,1,0.00660393,1 GT:PL 0/1:54,0,128
Scaffold_1 130471 . A G 27.0155 PASS DP=7;VDB=0.0249187;SGB=-0.511536;RPB=0.607698;MQB=0.202566;MQSB=0.810265;BQB=1.01283;MQ0F=0;AF1=0.499999;AC1=1;DP4=3,1,1,2;MQ=50;FQ=30.0194;PV4=0.485714,1,0.0144736,1 GT:PL 0/1:57,0,124
Scaffold_1 130484 . G A 19.061 PASS DP=10;VDB=0.0249187;SGB=-0.511536;RPB=0.366593;MQB=0.0916482;MQSB=0.783809;BQB=0.916482;MQ0F=0;AF1=0.499997;AC1=1;DP4=5,2,1,2;MQ=53;FQ=22.0421;PV4=0.5,0.283002,0.00140404,1 GT:PL 0/1:49,0,179
Scaffold_1 130485 . T C 24.0241 PASS DP=10;VDB=0.0249187;SGB=-0.511536;RPB=0.450401;MQB=0.150134;MQSB=0.750668;BQB=0.900802;MQ0F=0;AF1=0.499999;AC1=1;DP4=4,1,1,2;MQ=51;FQ=27.0236;PV4=0.464286,1,0.00660393,1 GT:PL 0/1:54,0,140
Scaffold_1 130504 . T C 19.061 PASS DP=10;VDB=0.0249187;SGB=-0.511536;RPB=0.274945;MQB=0.0916482;MQSB=0.783809;BQB=0.733186;MQ0F=0;AF1=0.499997;AC1=1;DP4=5,2,1,2;MQ=53;FQ=22.0421;PV4=0.5,1,0.00140404,0.455607 GT:PL 0/1:49,0,163
Scaffold_1 131833 . A G 14.176 PASS DP=21;VDB=0.38;SGB=-0.453602;RPB=0.321429;MQB=0.607143;MQSB=0.702619;BQB=0.214286;MQ0F=0;AF1=0.49999;AC1=1;DP4=6,8,2,0;MQ=57;FQ=17.1004;PV4=0.466667,1,0.364873,0.0488319 GT:PL 0/1:44,0,255
Scaffold_1 134325 . T A 17.0924 PASS DP=11;VDB=0.62656;SGB=-0.511536;RPB=0.916482;MQB=0.0916482;MQSB=0.503877;BQB=0.458241;MQ0F=0;AF1=0.499995;AC1=1;DP4=4,3,0,3;MQ=53;FQ=20.058;PV4=0.2,0.222491,4.82023e-06,0.0664005 GT:PL 0/1:47,0,213
Scaffold_1 134393 . T C 15.1417 PASS DP=11;VDB=0.928514;SGB=-0.511536;RPB=0.577865;MQB=0.115573;MQSB=0.974597;BQB=0.924584;MQ0F=0;AF1=0.499992;AC1=1;DP4=3,3,1,2;MQ=52;FQ=18.0829;PV4=1,0.319355,2.30599e-05,0.43316 GT:PL 0/1:45,0,169
Scaffold_1 134403 . G C 21.0411 PASS DP=9;VDB=0.928514;SGB=-0.511536;RPB=0.750668;MQB=0.150134;MQSB=0.900802;BQB=0.600535;MQ0F=0;AF1=0.499998;AC1=1;DP4=2,3,1,2;MQ=50;FQ=24.0321;PV4=1,1,0.000103768,0.229595 GT:PL 0/1:51,0,142
Scaffold_1 134404 . G A 18.0749 PASS DP=9;VDB=0.928514;SGB=-0.511536;RPB=0.809011;MQB=0.115573;MQSB=0.924584;BQB=0.809011;MQ0F=0;AF1=0.499996;AC1=1;DP4=2,4,1,2;MQ=52;FQ=21.0492;PV4=1,1,2.30599e-05,0.197454 GT:PL 0/1:48,0,165
Scaffold_1 137679 . A G 32.0097 PASS DP=7;VDB=0.88811;SGB=-0.511536;RPB=0.405132;MQB=0.202566;MQSB=0.4;BQB=0.607698;MQ0F=0;AF1=0.5;AC1=1;DP4=2,2,3,0;MQ=50;FQ=35.0165;PV4=0.428571,1,0.00660296,0.0527224 GT:PL 0/1:62,0,123
Scaffold_1 137710 . A G 37.0079 PASS DP=5;VDB=0.905887;SGB=-0.511536;RPB=0.666667;MQB=0;MQSB=0;BQB=0.5;MQ0F=0;AF1=0.500003;AC1=1;DP4=0,2,3,0;MQ=46;FQ=21.9743;PV4=0.1,1,0.04648,1 GT:PL 0/1:67,0,49
Scaffold_1 137718 . G A 32.0097 PASS DP=4;VDB=0.02;SGB=-0.453602;RPB=0;MQB=0;MQSB=0;BQB=0.5;MQ0F=0;AF1=0.5;AC1=1;DP4=0,2,2,0;MQ=51;FQ=30.8941;PV4=0.333333,1,0,1 GT:PL 0/1:62,0,60
Scaffold_1 137735 . C T 34.01 PASS DP=3;VDB=0.02;SGB=-0.453602;RPB=1;MQB=1;MQSB=1;BQB=1;MQ0F=0;AF1=0.500158;AC1=1;DP4=0,1,2,0;MQ=48;FQ=6.20244;PV4=0.333333,1,0,1 GT:PL 0/1:64,0,32
Scaffold_1 137738 . T C 34.01 PASS DP=3;VDB=0.02;SGB=-0.453602;RPB=1;MQB=1;MQSB=1;BQB=1;MQ0F=0;AF1=0.500158;AC1=1;DP4=0,1,2,0;MQ=48;FQ=6.20244;PV4=0.333333,1,0,1 GT:PL 0/1:64,0,32
Scaffold_1 137765 . G A 29.0123 PASS DP=6;VDB=0.02;SGB=-0.453602;RPB=0.666667;MQB=0;MQSB=0.333333;BQB=1;MQ0F=0;AF1=0.5;AC1=1;DP4=1,2,2,0;MQ=53;FQ=32.0176;PV4=0.4,1,0,1 GT:PL 0/1:59,0,102
Scaffold_1 137794 . T C 41.0074 PASS DP=8;VDB=0.878371;SGB=-0.511536;RPB=0.333333;MQB=0;MQSB=0.833333;BQB=1;MQ0F=0;AF1=0.5;AC1=1;DP4=1,1,2,1;MQ=46;FQ=38.5603;PV4=1,1,0.04648,1 GT:PL 0/1:71,0,67
Scaffold_1 137795 . G A 35.0083 PASS DP=8;VDB=0.878371;SGB=-0.511536;RPB=0.607698;MQB=0.202566;MQSB=1.01283;BQB=0.810265;MQ0F=0;AF1=0.5;AC1=1;DP4=2,2,2,1;MQ=50;FQ=38.0158;PV4=1,1,0.00660296,1 GT:PL 0/1:65,0,114
Scaffold_1 137800 . G A 32.0097 PASS DP=9;VDB=0.878371;SGB=-0.511536;RPB=0.450401;MQB=0.150134;MQSB=0.868321;BQB=0.450401;MQ0F=0;AF1=0.5;AC1=1;DP4=2,3,2,1;MQ=52;FQ=35.0165;PV4=1,1,0.00253657,0.19454 GT:PL 0/1:62,0,123
Scaffold_1 137814 . G A 28.0137 PASS DP=10;VDB=0.88811;SGB=-0.511536;RPB=0.202566;MQB=0.202566;MQSB=0.810265;BQB=1.01283;MQ0F=0;AF1=0.5;AC1=1;DP4=1,3,2,1;MQ=50;FQ=31.0185;PV4=0.485714,0.422836,0.00660296,0.1381 GT:PL 0/1:58,0,118
Scaffold_1 137860 . G A 10.42 PASS DP=13;VDB=0.450604;SGB=-0.511536;RPB=0.916482;MQB=0.733186;MQSB=0.916482;BQB=0.916482;MQ0F=0;AF1=0.499975;AC1=1;DP4=3,4,0,3;MQ=57;FQ=13.2265;PV4=0.475,0.400013,0.0664005,1 GT:PL 0/1:40,0,181
Scaffold_1 137881 . C A 18.0749 PASS DP=14;VDB=0.470313;SGB=-0.511536;RPB=0.496585;MQB=0.699673;MQSB=0.953497;BQB=0.879351;MQ0F=0;AF1=0.499996;AC1=1;DP4=4,6,0,3;MQ=58;FQ=21.0492;PV4=0.496504,1,0.0321047,1 GT:PL 0/1:48,0,254
Scaffold_1 137912 . A G 29.0123 PASS DP=10;VDB=0.470313;SGB=-0.511536;RPB=0.924584;MQB=0.809011;MQSB=0.924584;BQB=0.924584;MQ0F=0;AF1=0.5;AC1=1;DP4=3,3,0,3;MQ=57;FQ=32.0178;PV4=0.464286,0.322688,0.0852353,0.110801 GT:PL 0/1:59,0,194
Scaffold_1 137925 . A G 35.0083 PASS DP=11;VDB=0.698947;SGB=-0.511536;RPB=0.458241;MQB=0.733186;MQSB=0.783809;BQB=0.824834;MQ0F=0;AF1=0.5;AC1=1;DP4=3,4,1,2;MQ=57;FQ=38.0158;PV4=1,0.252571,0.0664005,1 GT:PL 0/1:65,0,219
Scaffold_1 137942 . G A 16.1143 PASS DP=11;VDB=0.02;SGB=-0.453602;RPB=1;MQB=0.875;MQSB=0.733186;BQB=0.75;MQ0F=0;AF1=0.499994;AC1=1;DP4=3,5,0,2;MQ=60;FQ=19.069;PV4=1,1,1,1 GT:PL 0/1:46,0,217
Scaffold_1 137970 . C T 22.0341 PASS DP=9;VDB=0.02;SGB=-0.453602;RPB=0.333333;MQB=0.666667;MQSB=0.62023;BQB=0.5;MQ0F=0;AF1=0.499998;AC1=1;DP4=4,2,0,2;MQ=57;FQ=25.0286;PV4=0.428571,1,1,0.0418179 GT:PL 0/1:52,0,166
Scaffold_1 150270 . G A 37.5422 PASS DP=12;VDB=0.153613;SGB=-0.590765;RPB=0.148586;MQB=0.0297172;MQSB=0.309786;BQB=0.564628;MQ0F=0.583333;AF1=1;AC1=2;DP4=3,3,5,0;MQ=22;FQ=-28.9912;PV4=0.181818,0.153151,1,1 GT:PL 1/1:67,2,0
Scaffold_1 157367 . A G 45.0072 PASS DP=11;VDB=0.0433485;SGB=-0.511536;RPB=0.0916482;MQB=0.274945;MQSB=0.916482;BQB=0.641538;MQ0F=0;AF1=0.5;AC1=1;DP4=4,3,3,0;MQ=52;FQ=48.0153;PV4=0.475,1,0.133997,0.449152 GT:PL 0/1:75,0,163
Scaffold_1 157375 . G A 48.0072 PASS DP=10;VDB=0.0481133;SGB=-0.511536;RPB=0.115573;MQB=0.346719;MQSB=1;BQB=0.462292;MQ0F=0;AF1=0.5;AC1=1;DP4=5,1,3,0;MQ=51;FQ=51.0153;PV4=1,1,0.17423,1 GT:PL 0/1:78,0,130
Scaffold_1 157434 . T C 34.0087 PASS DP=15;VDB=0.0433485;SGB=-0.511536;RPB=0.973096;MQB=0.1098;MQSB=0.997503;BQB=0.201286;MQ0F=0;AF1=0.5;AC1=1;DP4=7,4,3,0;MQ=55;FQ=37.016;PV4=0.505495,1,0.0494324,1 GT:PL 0/1:64,0,221
Scaffold_1 157447 . C A 30.0112 PASS DP=13;VDB=0.0481133;SGB=-0.511536;RPB=0.707404;MQB=0.151887;MQSB=0.962269;BQB=0.933909;MQ0F=0;AF1=0.5;AC1=1;DP4=6,3,3,0;MQ=54;FQ=33.0172;PV4=0.509091,1,0.0807119,1 GT:PL 0/1:60,0,204
Scaffold_1 157469 . G T 49.0072 PASS DP=17;VDB=0.751039;SGB=-0.556411;RPB=0.261826;MQB=0.0528036;MQSB=1;BQB=0.983592;MQ0F=0;AF1=0.5;AC1=1;DP4=8,4,4,0;MQ=54;FQ=52.0153;PV4=0.516484,1,0.0191193,1 GT:PL 0/1:79,0,253
Scaffold_1 157474 . T C 12.272 PASS DP=18;VDB=0.0481133;SGB=-0.511536;RPB=0.0851108;MQB=0.149163;MQSB=1;BQB=0.865198;MQ0F=0;AF1=0.499984;AC1=1;DP4=9,4,3,0;MQ=54;FQ=15.1496;PV4=0.528571,1,0.0539944,1 GT:PL 0/1:42,0,253
Scaffold_1 157483 . T C 19.061 PASS DP=19;VDB=0.0481133;SGB=-0.511536;RPB=0.0764263;MQB=0.131106;MQSB=0.998399;BQB=1;MQ0F=0;AF1=0.499997;AC1=1;DP4=10,4,3,0;MQ=55;FQ=22.0421;PV4=0.541176,1,0.0438491,0.141683 GT:PL 0/1:49,0,255
Scaffold_1 157507 . T C 15.1417 PASS DP=18;VDB=0.663511;SGB=-0.511536;RPB=0.602289;MQB=0.0286491;MQSB=0.422203;BQB=0.97232;MQ0F=0;AF1=0.499992;AC1=1;DP4=11,4,0,3;MQ=56;FQ=18.0829;PV4=0.0428922,0.436825,3.97728e-06,0.0945794 GT:PL 0/1:45,0,255
Scaffold_1 157518 . G A 21.0411 PASS DP=18;VDB=0.62656;SGB=-0.511536;RPB=0.602289;MQB=0.0286491;MQSB=0.422203;BQB=0.673857;MQ0F=0;AF1=0.499998;AC1=1;DP4=11,4,0,3;MQ=56;FQ=24.0321;PV4=0.0428922,1,3.97728e-06,1 GT:PL 0/1:51,0,255
Scaffold_1 157546 . T A 24.0241 PASS DP=17;VDB=0.568985;SGB=-0.511536;RPB=0.67781;MQB=0.0301974;MQSB=0.447194;BQB=0.639909;MQ0F=0;AF1=0.499999;AC1=1;DP4=10,4,0,3;MQ=56;FQ=27.0236;PV4=0.0514706,1,8.51911e-06,1 GT:PL 0/1:54,0,255
Scaffold_1 170359 . A G 42.0073 PASS DP=10;VDB=0.273436;SGB=-0.590765;RPB=0.952347;MQB=0.0476173;MQSB=0.25;BQB=0.904729;MQ0F=0.1;AF1=0.5;AC1=1;DP4=5,0,3,2;MQ=47;FQ=45.0145;PV4=0.444444,1,0.000433919,1 GT:PL 0/1:72,0,109
Scaffold_1 171337 . T C 14.176 PASS DP=12;VDB=0.0117389;SGB=-0.590765;RPB=0.238087;MQB=0.0476173;MQSB=0.895781;BQB=0.904729;MQ0F=0;AF1=0.49999;AC1=1;DP4=2,3,2,3;MQ=44;FQ=17.1004;PV4=1,0.219968,8.94926e-07,1 GT:PL 0/1:44,0,163
Scaffold_1 175447 . C A 16.1143 PASS DP=7;VDB=0.14;SGB=-0.453602;RPB=0.875;MQB=1;MQSB=1;BQB=0.75;MQ0F=0;AF1=0.499994;AC1=1;DP4=2,2,0,2;MQ=60;FQ=19.069;PV4=0.466667,0.26105,1,1 GT:PL 0/1:46,0,122
Scaffold_1 177174 . G T 120.015 PASS DP=10;VDB=0.234531;SGB=-0.662043;MQSB=0.924584;MQ0F=0;AF1=1;AC1=2;DP4=0,0,3,6;MQ=60;FQ=-53.9861 GT:PL 1/1:153,27,0
Scaffold_1 198822 . G A 17.2105 PASS DP=17;VDB=0.0588763;SGB=-0.616816;RPB=0.2016;MQB=0.0950891;MQSB=0.526391;BQB=0.863243;MQ0F=0.764706;AF1=1;AC1=2;DP4=5,5,0,6;MQ=13;FQ=-27.9927;PV4=0.0934066,0.30014,1,1 GT:PL 1/1:46,1,0
Scaffold_1 199412 . G A 26.7735 PASS DP=2;VDB=0.44;SGB=-0.453602;MQ0F=0;AF1=1;AC1=2;DP4=0,0,2,0;MQ=32;FQ=-32.988 GT:PL 1/1:58,6,0
Scaffold_1 199415 . A T 26.7735 PASS DP=2;VDB=0.44;SGB=-0.453602;MQ0F=0;AF1=1;AC1=2;DP4=0,0,2,0;MQ=32;FQ=-32.988 GT:PL 1/1:58,6,0
Scaffold_1 199417 . T A 26.7735 PASS DP=2;VDB=0.42;SGB=-0.453602;MQ0F=0;AF1=1;AC1=2;DP4=0,0,2,0;MQ=32;FQ=-32.988 GT:PL 1/1:58,6,0
Scaffold_1 199419 . A T 26.7735 PASS DP=2;VDB=0.42;SGB=-0.453602;MQ0F=0;AF1=1;AC1=2;DP4=0,0,2,0;MQ=32;FQ=-32.988 GT:PL 1/1:58,6,0
Scaffold_1 199421 . T G 26.7735 PASS DP=2;VDB=0.44;SGB=-0.453602;MQ0F=0;AF1=1;AC1=2;DP4=0,0,2,0;MQ=32;FQ=-32.988 GT:PL 1/1:58,6,0
Scaffold_1 199422 . G T 26.7735 PASS DP=2;VDB=0.42;SGB=-0.453602;MQ0F=0;AF1=1;AC1=2;DP4=0,0,2,0;MQ=32;FQ=-32.988 GT:PL 1/1:58,6,0
Scaffold_1 199424 . T G 19.8099 PASS DP=2;VDB=0.44;SGB=-0.453602;MQ0F=0;AF1=1;AC1=2;DP4=0,0,2,0;MQ=32;FQ=-32.988 GT:PL 1/1:51,6,0
Scaffold_1 199425 . G T 26.7735 PASS DP=2;VDB=0.42;SGB=-0.453602;MQ0F=0;AF1=1;AC1=2;DP4=0,0,2,0;MQ=32;FQ=-32.988 GT:PL 1/1:58,6,0
Scaffold_1 199427 . T A 26.7735 PASS DP=2;VDB=0.44;SGB=-0.453602;MQ0F=0;AF1=1;AC1=2;DP4=0,0,2,0;MQ=32;FQ=-32.988 GT:PL 1/1:58,6,0
Scaffold_1 199428 . A G 26.7735 PASS DP=2;VDB=0.42;SGB=-0.453602;MQ0F=0;AF1=1;AC1=2;DP4=0,0,2,0;MQ=32;FQ=-32.988 GT:PL 1/1:58,6,0
Scaffold_1 199429 . G A 26.7735 PASS DP=2;VDB=0.44;SGB=-0.453602;MQ0F=0;AF1=1;AC1=2;DP4=0,0,2,0;MQ=32;FQ=-32.988 GT:PL 1/1:58,6,0
Scaffold_1 199432 . A C 26.7735 PASS DP=2;VDB=0.44;SGB=-0.453602;MQ0F=0;AF1=1;AC1=2;DP4=0,0,2,0;MQ=32;FQ=-32.988 GT:PL 1/1:58,6,0
Scaffold_1 199434 . C A 26.7735 PASS DP=2;VDB=0.42;SGB=-0.453602;MQ0F=0;AF1=1;AC1=2;DP4=0,0,2,0;MQ=32;FQ=-32.988 GT:PL 1/1:58,6,0
Scaffold_1 199435 . A T 26.7735 PASS DP=2;VDB=0.44;SGB=-0.453602;MQ0F=0;AF1=1;AC1=2;DP4=0,0,2,0;MQ=32;FQ=-32.988 GT:PL 1/1:58,6,0
Scaffold_1 199436 . T G 26.7735 PASS DP=2;VDB=0.42;SGB=-0.453602;MQ0F=0;AF1=1;AC1=2;DP4=0,0,2,0;MQ=32;FQ=-32.988 GT:PL 1/1:58,6,0
Scaffold_1 199438 . G A 26.7735 PASS DP=2;VDB=0.44;SGB=-0.453602;MQ0F=0;AF1=1;AC1=2;DP4=0,0,2,0;MQ=32;FQ=-32.988 GT:PL 1/1:58,6,0
Scaffold_1 199439 . A G 26.7735 PASS DP=2;VDB=0.42;SGB=-0.453602;MQ0F=0;AF1=1;AC1=2;DP4=0,0,2,0;MQ=32;FQ=-32.988 GT:PL 1/1:58,6,0
Scaffold_1 199440 . G A 26.7735 PASS DP=2;VDB=0.42;SGB=-0.453602;MQ0F=0;AF1=1;AC1=2;DP4=0,0,2,0;MQ=32;FQ=-32.988 GT:PL 1/1:58,6,0
Scaffold_1 199441 . A T 26.7735 PASS DP=3;VDB=0.44;SGB=-0.453602;MQ0F=0.333333;AF1=1;AC1=2;DP4=0,0,2,0;MQ=32;FQ=-32.988 GT:PL 1/1:58,6,0
Scaffold_1 199442 . T G 26.7735 PASS DP=3;VDB=0.42;SGB=-0.453602;MQ0F=0.333333;AF1=1;AC1=2;DP4=0,0,2,0;MQ=32;FQ=-32.988 GT:PL 1/1:58,6,0
Scaffold_1 199443 . G A 22.0392 PASS DP=3;VDB=0.42;SGB=-0.453602;RPB=1;MQB=1;MQSB=1;BQB=1;MQ0F=0.333333;AF1=1;AC1=2;DP4=0,1,2,0;MQ=26;FQ=-29.9901;PV4=0.333333,1,1,1 GT:PL 1/1:52,3,0
Scaffold_1 199444 . A T 22.0392 PASS DP=3;VDB=0.44;SGB=-0.453602;RPB=1;MQB=1;MQSB=1;BQB=1;MQ0F=0.333333;AF1=1;AC1=2;DP4=0,1,2,0;MQ=26;FQ=-29.9901;PV4=0.333333,0.333333,1,1 GT:PL 1/1:52,3,0
Scaffold_1 199445 . T G 22.0392 PASS DP=3;VDB=0.42;SGB=-0.453602;RPB=1;MQB=1;MQSB=1;BQB=1;MQ0F=0.333333;AF1=1;AC1=2;DP4=0,1,2,0;MQ=26;FQ=-29.9901;PV4=0.333333,1,1,1 GT:PL 1/1:52,3,0
Scaffold_1 199446 . G A 22.0392 PASS DP=3;VDB=0.42;SGB=-0.453602;RPB=1;MQB=1;MQSB=1;BQB=1;MQ0F=0.333333;AF1=1;AC1=2;DP4=0,1,2,0;MQ=26;FQ=-29.9901;PV4=0.333333,0.333333,1,1 GT:PL 1/1:52,3,0
Scaffold_1 199447 . A T 22.0392 PASS DP=3;VDB=0.44;SGB=-0.453602;RPB=1;MQB=1;MQSB=1;BQB=1;MQ0F=0.333333;AF1=1;AC1=2;DP4=0,1,2,0;MQ=26;FQ=-29.9901;PV4=0.333333,1,1,1 GT:PL 1/1:52,3,0
Scaffold_1 199448 . T G 20.055 PASS DP=3;VDB=0.42;SGB=-0.453602;RPB=1;MQB=1;MQSB=1;BQB=1;MQ0F=0.333333;AF1=1;AC1=2;DP4=0,1,2,0;MQ=26;FQ=-29.9901;PV4=0.333333,1,1,1 GT:PL 1/1:50,3,0
Scaffold_1 199449 . G A 22.0392 PASS DP=3;VDB=0.42;SGB=-0.453602;RPB=1;MQB=1;MQSB=1;BQB=1;MQ0F=0.333333;AF1=1;AC1=2;DP4=0,1,2,0;MQ=26;FQ=-29.9901;PV4=0.333333,0.333333,1,1 GT:PL 1/1:52,3,0
Scaffold_1 199450 . A G 22.0392 PASS DP=3;VDB=0.44;SGB=-0.453602;RPB=1;MQB=1;MQSB=1;BQB=1;MQ0F=0.333333;AF1=1;AC1=2;DP4=0,1,2,0;MQ=26;FQ=-29.9901;PV4=0.333333,1,1,1 GT:PL 1/1:52,3,0
Scaffold_1 199451 . G A 22.0392 PASS DP=3;VDB=0.42;SGB=-0.453602;RPB=1;MQB=1;MQSB=1;BQB=1;MQ0F=0.333333;AF1=1;AC1=2;DP4=0,1,2,0;MQ=26;FQ=-29.9901;PV4=0.333333,1,1,1 GT:PL 1/1:52,3,0
Scaffold_1 199452 . A T 22.0392 PASS DP=3;VDB=0.42;SGB=-0.453602;RPB=1;MQB=1;MQSB=1;BQB=1;MQ0F=0.333333;AF1=1;AC1=2;DP4=0,1,2,0;MQ=26;FQ=-29.9901;PV4=0.333333,0.333333,1,1 GT:PL 1/1:52,3,0
Scaffold_1 199453 . T A 22.0392 PASS DP=3;VDB=0.44;SGB=-0.453602;RPB=1;MQB=1;MQSB=1;BQB=1;MQ0F=0.333333;AF1=1;AC1=2;DP4=0,1,2,0;MQ=26;FQ=-29.9901;PV4=0.333333,1,1,1 GT:PL 1/1:52,3,0
Scaffold_1 199454 . A T 22.0392 PASS DP=3;VDB=0.42;SGB=-0.453602;RPB=1;MQB=1;MQSB=1;BQB=1;MQ0F=0.333333;AF1=1;AC1=2;DP4=0,1,2,0;MQ=26;FQ=-29.9901;PV4=0.333333,0.333333,1,1 GT:PL 1/1:52,3,0
Scaffold_1 199455 . G C 22.0392 PASS DP=3;VDB=0.42;SGB=-0.453602;RPB=1;MQB=1;MQSB=1;BQB=1;MQ0F=0.333333;AF1=1;AC1=2;DP4=0,1,2,0;MQ=26;FQ=-29.9901;PV4=0.333333,0.333333,1,1 GT:PL 1/1:52,3,0
Scaffold_1 199456 . C T 22.0392 PASS DP=3;VDB=0.44;SGB=-0.453602;RPB=1;MQB=1;MQSB=1;BQB=1;MQ0F=0.333333;AF1=1;AC1=2;DP4=0,1,2,0;MQ=26;FQ=-29.9901;PV4=0.333333,0.333333,1,1 GT:PL 1/1:52,3,0
Scaffold_1 199457 . T A 22.0392 PASS DP=3;VDB=0.42;SGB=-0.453602;RPB=1;MQB=1;MQSB=1;BQB=1;MQ0F=0.333333;AF1=1;AC1=2;DP4=0,1,2,0;MQ=26;FQ=-29.9901;PV4=0.333333,1,1,1 GT:PL 1/1:52,3,0
Scaffold_1 199603 . G T 11.3432 PASS DP=11;VDB=0.8442;SGB=-0.556411;RPB=0.649731;MQB=0.487298;MQSB=0.89338;BQB=0.89338;MQ0F=0.363636;AF1=0.500609;AC1=1;DP4=4,1,1,3;MQ=21;FQ=-3.60667;PV4=0.206349,0.473181,1,0.030263 GT:PL 0/1:41,0,26
Scaffold_1 199617 . G T 75.115 PASS DP=9;VDB=0.977157;SGB=-0.556411;RPB=0.62023;MQB=0.124046;MQSB=0.833333;BQB=0.868321;MQ0F=0.333333;AF1=0.512852;AC1=1;DP4=3,1,3,1;MQ=34;FQ=-14.1556;PV4=1,1,1,0.164831 GT:PL 0/1:105,0,13
Scaffold_1 199663 . G A 79.9725 PASS DP=4;VDB=0.235765;SGB=-0.511536;MQSB=1;MQ0F=0;AF1=1;AC1=2;DP4=0,0,2,1;MQ=56;FQ=-35.9869 GT:PL 1/1:112,9,0
Scaffold_1 199746 . G A 102.514 PASS DP=5;VDB=0.66971;SGB=-0.556411;MQSB=1;MQ0F=0;AF1=1;AC1=2;DP4=0,0,3,1;MQ=47;FQ=-38.9864 GT:PL 1/1:135,12,0
Scaffold_1 199785 . T A 120.264 PASS DP=5;VDB=0.847724;SGB=-0.590765;MQSB=0.5;MQ0F=0;AF1=1;AC1=2;DP4=0,0,3,2;MQ=42;FQ=-41.9862 GT:PL 1/1:153,15,0
Scaffold_1 199806 . G A 103.514 PASS DP=4;VDB=0.811811;SGB=-0.556411;MQSB=0.75;MQ0F=0;AF1=1;AC1=2;DP4=0,0,2,2;MQ=38;FQ=-38.9864 GT:PL 1/1:136,12,0
Scaffold_1 199840 . C T 25.0227 PASS DP=6;VDB=0.56;SGB=-0.453602;RPB=0;MQB=0;MQSB=0;BQB=0.75;MQ0F=0.333333;AF1=0.500249;AC1=1;DP4=0,4,2,0;MQ=27;FQ=4.76503;PV4=0.0666667,1,1,1 GT:PL 0/1:55,0,30
Scaffold_1 202695 . G T 19.061 PASS DP=10;VDB=0.02;SGB=-0.453602;RPB=0.857143;MQB=1;MQSB=0.974597;BQB=0.857143;MQ0F=0;AF1=0.499997;AC1=1;DP4=3,4,2,0;MQ=60;FQ=22.0421;PV4=0.444444,1,1,1 GT:PL 0/1:49,0,200
Scaffold_1 206500 . C A 10.42 PASS DP=12;VDB=0.02;SGB=-0.453602;RPB=0.666667;MQB=1;MQSB=0.950952;BQB=0.666667;MQ0F=0;AF1=0.499975;AC1=1;DP4=5,4,0,2;MQ=60;FQ=13.2265;PV4=0.454545,0.415624,1,1 GT:PL 0/1:40,0,236
Scaffold_1 210734 . G A 20.0499 PASS DP=12;VDB=0.43429;SGB=-0.556411;RPB=0.697274;MQB=0.203896;MQSB=0.962269;BQB=0.793923;MQ0F=0.0833333;AF1=0.499997;AC1=1;DP4=6,2,3,1;MQ=51;FQ=23.0366;PV4=1,1,0.00716608,1 GT:PL 0/1:50,0,186
Scaffold_1 210737 . C A 16.1143 PASS DP=12;VDB=0.645206;SGB=-0.511536;RPB=0.995736;MQB=0.652235;MQSB=0.962269;BQB=0.962269;MQ0F=0.0833333;AF1=0.499994;AC1=1;DP4=7,2,2,1;MQ=51;FQ=19.069;PV4=1,1,0.149407,1 GT:PL 0/1:46,0,185
Scaffold_1 210745 . G A 19.061 PASS DP=12;VDB=0.663511;SGB=-0.511536;RPB=0.979382;MQB=0.716531;MQSB=1;BQB=0.263597;MQ0F=0.0833333;AF1=0.499997;AC1=1;DP4=7,1,2,1;MQ=50;FQ=22.0421;PV4=0.490909,0.00734415,0.181995,1 GT:PL 0/1:49,0,169
Scaffold_1 210775 . T C 51.0072 PASS DP=17;VDB=0.348933;SGB=-0.556411;RPB=0.935966;MQB=0.861658;MQSB=1;BQB=0.983592;MQ0F=0.117647;AF1=0.5;AC1=1;DP4=12,0,3,1;MQ=49;FQ=54.0154;PV4=0.25,0.109383,0.450588,0.200003 GT:PL 0/1:81,0,159
Scaffold_1 210831 . C T 120.008 PASS DP=28;VDB=0.443438;SGB=-0.662043;RPB=0.998678;MQB=0.0917012;MQSB=0.902938;BQB=0.558035;MQ0F=0.107143;AF1=0.5;AC1=1;DP4=12,6,5,4;MQ=49;FQ=123.016;PV4=0.683129,0.230292,0.0297425,1 GT:PL 0/1:150,0,255
Scaffold_1 210848 . A G 128.008 PASS DP=29;VDB=0.643457;SGB=-0.676189;RPB=0.597127;MQB=0.0152418;MQSB=0.927743;BQB=0.634436;MQ0F=0.103448;AF1=0.5;AC1=1;DP4=8,4,7,4;MQ=47;FQ=131.016;PV4=1,0.492136,0.00166298,0.0713913 GT:PL 0/1:158,0,244
Scaffold_1 210863 . G A 73.0074 PASS DP=26;VDB=0.0539735;SGB=-0.616816;RPB=0.851671;MQB=0.110251;MQSB=0.806452;BQB=0.965069;MQ0F=0.0769231;AF1=0.5;AC1=1;DP4=12,6,3,3;MQ=50;FQ=76.0156;PV4=0.634907,1,0.0824217,1 GT:PL 0/1:103,0,255
Scaffold_1 210891 . G C 87.0076 PASS DP=25;VDB=0.0539735;SGB=-0.616816;RPB=0.305357;MQB=0.258321;MQSB=0.808949;BQB=0.83771;MQ0F=0.08;AF1=0.5;AC1=1;DP4=10,7,3,3;MQ=48;FQ=90.0158;PV4=1,1,0.130074,1 GT:PL 0/1:117,0,255
Scaffold_1 210895 . A T 35.0083 PASS DP=25;VDB=0.131345;SGB=-0.556411;RPB=0.126994;MQB=0.391169;MQSB=0.813484;BQB=0.342137;MQ0F=0.08;AF1=0.5;AC1=1;DP4=9,7,1,3;MQ=48;FQ=38.0158;PV4=0.582043,1,0.153683,0.277742 GT:PL 0/1:65,0,255
Scaffold_1 210910 . A G 111.008 PASS DP=21;VDB=0.0408554;SGB=-0.662043;RPB=0.63114;MQB=0.000633889;MQSB=0.960401;BQB=0.913101;MQ0F=0.047619;AF1=0.5;AC1=1;DP4=5,7,4,5;MQ=50;FQ=114.016;PV4=1,0.486825,9.24408e-07,1 GT:PL 0/1:141,0,255
Scaffold_1 210915 . C A 72.0074 PASS DP=20;VDB=0.164385;SGB=-0.616816;RPB=0.173013;MQB=0.0718859;MQSB=0.974693;BQB=0.476528;MQ0F=0.05;AF1=0.5;AC1=1;DP4=6,6,1,5;MQ=49;FQ=75.0156;PV4=0.315611,0.0438038,0.0448507,0.0332331 GT:PL 0/1:102,0,246
Scaffold_1 210924 . A T 20.0499 PASS DP=21;VDB=0.0257451;SGB=-0.556411;RPB=0.0387258;MQB=0.149382;MQSB=0.976248;BQB=0.995012;MQ0F=0.047619;AF1=0.499997;AC1=1;DP4=6,9,0,4;MQ=51;FQ=23.0366;PV4=0.255418,0.483213,0.0556804,0.219651 GT:PL 0/1:50,0,255
Scaffold_1 210933 . T C 89.0077 PASS DP=23;VDB=0.449235;SGB=-0.662043;RPB=0.525788;MQB=0.000380129;MQSB=0.882005;BQB=0.982301;MQ0F=0.0434783;AF1=0.5;AC1=1;DP4=4,10,3,6;MQ=51;FQ=92.0158;PV4=1,0.286146,1.60007e-07,0.146941 GT:PL 0/1:119,0,255
Scaffold_1 210978 . A T 39.0076 PASS DP=18;VDB=0.281015;SGB=-0.590765;RPB=0.618783;MQB=0.0265162;MQSB=0.970446;BQB=0.655816;MQ0F=0.0555556;AF1=0.5;AC1=1;DP4=4,6,1,4;MQ=50;FQ=42.0155;PV4=0.6004,0.190724,0.000643106,0.45711 GT:PL 0/1:69,0,248
Scaffold_1 211001 . G A 22.0341 PASS DP=19;VDB=0.275636;SGB=-0.511536;RPB=0.416862;MQB=0.525788;MQSB=0.700784;BQB=0.998018;MQ0F=0.0526316;AF1=0.499998;AC1=1;DP4=5,9,0,3;MQ=50;FQ=25.0286;PV4=0.514706,0.30508,0.306892,1 GT:PL 0/1:52,0,255
Scaffold_1 211012 . G A 11.3381 PASS DP=17;VDB=0.192436;SGB=-0.511536;RPB=0.896649;MQB=0.2628;MQSB=0.505697;BQB=0.973096;MQ0F=0.0588235;AF1=0.49998;AC1=1;DP4=3,8,0,3;MQ=51;FQ=14.1838;PV4=1,0.331557,0.0972852,1 GT:PL 0/1:41,0,242
Scaffold_1 211014 . C T 29.0123 PASS DP=17;VDB=0.259298;SGB=-0.511536;RPB=0.430095;MQB=0.430095;MQSB=0.872525;BQB=0.976835;MQ0F=0.0588235;AF1=0.5;AC1=1;DP4=4,8,0,3;MQ=50;FQ=32.0178;PV4=0.516484,0.254952,0.310958,1 GT:PL 0/1:59,0,254
Scaffold_1 211034 . C G 26.0177 PASS DP=18;VDB=0.152777;SGB=-0.556411;RPB=0.960728;MQB=0.0988549;MQSB=1;BQB=0.998399;MQ0F=0.0555556;AF1=0.499999;AC1=1;DP4=3,10,0,4;MQ=51;FQ=29.0205;PV4=0.541176,0.399861,0.0446762,1 GT:PL 0/1:56,0,230
Scaffold_1 211051 . C G 26.0177 PASS DP=16;VDB=0.185719;SGB=-0.511536;RPB=0.748798;MQB=0.597928;MQSB=1;BQB=0.699673;MQ0F=0.0625;AF1=0.499999;AC1=1;DP4=1,9,0,3;MQ=48;FQ=29.0205;PV4=1,0.16365,0.385108,1 GT:PL 0/1:56,0,159
Scaffold_1 211055 . A G 37.0079 PASS DP=17;VDB=0.124686;SGB=-0.556411;RPB=0.991513;MQB=0.146957;MQSB=1;BQB=0.735784;MQ0F=0.0588235;AF1=0.5;AC1=1;DP4=1,10,0,4;MQ=50;FQ=40.0156;PV4=1,1,0.0718812,1 GT:PL 0/1:67,0,165
Scaffold_1 211057 . C T 46.0072 PASS DP=17;VDB=0.0501588;SGB=-0.590765;RPB=0.954207;MQB=0.0497871;MQSB=1;BQB=0.581657;MQ0F=0.0588235;AF1=0.5;AC1=1;DP4=0,10,1,4;MQ=50;FQ=49.0153;PV4=0.333333,0.03378,0.0121449,1 GT:PL 0/1:76,0,162
Scaffold_1 211068 . G T 35.0083 PASS DP=15;VDB=0.166456;SGB=-0.511536;RPB=0.914584;MQB=0.314383;MQSB=1;BQB=1;MQ0F=0;AF1=0.5;AC1=1;DP4=1,9,0,3;MQ=51;FQ=38.0158;PV4=1,1,0.199485,1 GT:PL 0/1:65,0,173
Scaffold_1 211164 . A T 105.789 PASS DP=7;VDB=0.0456508;SGB=-0.590765;RPB=1;MQB=1;MQSB=1;BQB=1;MQ0F=0.142857;AF1=1;AC1=2;DP4=1,0,0,5;MQ=55;FQ=-36.9867;PV4=0.166667,0,1,1 GT:PL 1/1:138,10,0
Scaffold_1 211176 . C G 89.0131 PASS DP=17;VDB=0.807392;SGB=-0.590765;RPB=0.208021;MQB=0.0297172;MQSB=0.0297172;BQB=0.0297172;MQ0F=0.294118;AF1=0.500629;AC1=1;DP4=6,0,0,5;MQ=40;FQ=-3.53091;PV4=0.0021645,0.00084997,1,1 GT:PL 0/1:119,0,26
Scaffold_1 231309 . C A 27.0155 PASS DP=11;VDB=0.0221621;SGB=-0.511536;RPB=0.184981;MQB=1;MQSB=0.950952;BQB=0.532481;MQ0F=0;AF1=0.499999;AC1=1;DP4=5,3,0,3;MQ=60;FQ=30.0194;PV4=0.181818,0.122425,1,1 GT:PL 0/1:57,0,207
Scaffold_1 259384 . A G 20.0499 PASS DP=6;VDB=0.02;SGB=-0.453602;RPB=0.5;MQB=1;MQSB=0.861511;BQB=0.75;MQ0F=0;AF1=0.499997;AC1=1;DP4=1,3,2,0;MQ=60;FQ=23.0366;PV4=0.4,0.316406,1,1 GT:PL 0/1:50,0,121
Scaffold_1 259484 . A G 13.2188 PASS DP=12;VDB=0.02;SGB=-0.453602;RPB=0;MQB=1;MQSB=0.964642;BQB=0.666667;MQ0F=0;AF1=0.499987;AC1=1;DP4=4,5,0,2;MQ=60;FQ=16.1222;PV4=0.490909,1,1,0.0554188 GT:PL 0/1:43,0,230
Scaffold_1 264839 . G A 11.3381 PASS DP=9;VDB=0.02;SGB=-0.453602;RPB=0.333333;MQB=1;MQSB=0.900802;BQB=0.25;MQ0F=0;AF1=0.49998;AC1=1;DP4=3,3,0,2;MQ=60;FQ=14.1838;PV4=0.464286,0.0334238,1,1 GT:PL 0/1:41,0,174
Scaffold_1 265028 . G T 32.0097 PASS DP=13;VDB=0.0221621;SGB=-0.511536;RPB=0.879351;MQB=1;MQSB=1;BQB=0.699673;MQ0F=0;AF1=0.5;AC1=1;DP4=7,3,3,0;MQ=60;FQ=35.0165;PV4=0.527972,1,1,1 GT:PL 0/1:62,0,227
Scaffold_1 268050 . G T 16.1143 PASS DP=12;VDB=0.02;SGB=-0.453602;RPB=1;MQB=1;MQSB=1.00775;BQB=0.5;MQ0F=0;AF1=0.499994;AC1=1;DP4=4,4,0,2;MQ=60;FQ=19.069;PV4=0.466667,1,1,1 GT:PL 0/1:46,0,201
Scaffold_1 277504 . G A 19.061 PASS DP=10;VDB=0.72;SGB=-0.453602;RPB=1;MQB=0.5;MQSB=0.900802;BQB=0.916667;MQ0F=0;AF1=0.499997;AC1=1;DP4=3,3,2,0;MQ=58;FQ=22.0421;PV4=0.464286,1,0.0390704,0.43008 GT:PL 0/1:49,0,164
Scaffold_1 277513 . G A 38.0077 PASS DP=10;VDB=0.905887;SGB=-0.511536;RPB=0.900802;MQB=0.450401;MQSB=0.600535;BQB=0.450401;MQ0F=0;AF1=0.5;AC1=1;DP4=2,3,3,0;MQ=56;FQ=41.0155;PV4=0.196429,0.0479499,0.017218,0.117829 GT:PL 0/1:68,0,157
Scaffold_1 277627 . A G 54.0072 PASS DP=12;VDB=0.793693;SGB=-0.511536;RPB=1;MQB=0.0497871;MQSB=0.643095;BQB=0.472367;MQ0F=0;AF1=0.5;AC1=1;DP4=6,2,1,2;MQ=56;FQ=57.0154;PV4=0.490909,1,1.27948e-08,1 GT:PL 0/1:84,0,202
Scaffold_1 277635 . A G 46.0072 PASS DP=11;VDB=0.793693;SGB=-0.511536;RPB=0.916482;MQB=0.0916482;MQSB=0.458241;BQB=0.916482;MQ0F=0;AF1=0.5;AC1=1;DP4=6,1,1,2;MQ=55;FQ=49.0153;PV4=0.183333,1,9.43116e-08,0.305857 GT:PL 0/1:76,0,174
Scaffold_1 277644 . G A 47.0072 PASS DP=12;VDB=0.793693;SGB=-0.511536;RPB=0.829029;MQB=0.0497871;MQSB=0.643095;BQB=0.594025;MQ0F=0;AF1=0.5;AC1=1;DP4=6,2,1,2;MQ=56;FQ=50.0153;PV4=0.490909,1,1.27948e-08,0.297774 GT:PL 0/1:77,0,179
Scaffold_1 277659 . T C 26.0177 PASS DP=12;VDB=0.126715;SGB=-0.511536;RPB=0.995736;MQB=0.0443614;MQSB=0.372712;BQB=0.983051;MQ0F=0;AF1=0.499999;AC1=1;DP4=6,3,0,3;MQ=56;FQ=29.0205;PV4=0.181818,0.384206,4.10205e-09,1 GT:PL 0/1:56,0,205
Scaffold_1 277706 . C G 39.0076 PASS DP=12;VDB=0.116687;SGB=-0.511536;RPB=0.213796;MQB=0.0443614;MQSB=0.594978;BQB=0.540433;MQ0F=0;AF1=0.5;AC1=1;DP4=4,5,0,3;MQ=56;FQ=42.0155;PV4=0.490909,1,4.10205e-09,0.253011 GT:PL 0/1:69,0,223
Scaffold_1 277707 . G A 39.0076 PASS DP=12;VDB=0.116687;SGB=-0.511536;RPB=0.213796;MQB=0.0443614;MQSB=0.594978;BQB=0.382304;MQ0F=0;AF1=0.5;AC1=1;DP4=4,5,0,3;MQ=56;FQ=42.0155;PV4=0.490909,1,4.10205e-09,0.232178 GT:PL 0/1:69,0,219
Scaffold_1 278430 . A C 15.143 PASS DP=6;VDB=0.18;SGB=-0.453602;RPB=1;MQB=1;MQSB=1;BQB=1;MQ0F=0;AF1=0.50015;AC1=1;DP4=0,1,2,0;MQ=43;FQ=6.04398;PV4=0.333333,0.333333,0.161955,1 GT:PL 0/1:45,0,32
Scaffold_1 278530 . T C 77.0075 PASS DP=16;VDB=0.125187;SGB=-0.616816;RPB=0.0747118;MQB=0.00502104;MQSB=0.148691;BQB=0.963903;MQ0F=0;AF1=0.5;AC1=1;DP4=4,6,6,0;MQ=52;FQ=80.0157;PV4=0.0338412,1,5.18446e-07,0.493397 GT:PL 0/1:107,0,230
Scaffold_1 278532 . C G 21.0411 PASS DP=16;VDB=0.036923;SGB=-0.511536;RPB=0.032027;MQB=0.27167;MQSB=0.148691;BQB=0.520042;MQ0F=0;AF1=0.499998;AC1=1;DP4=7,6,3,0;MQ=52;FQ=24.0321;PV4=0.25,0.0809778,0.0924572,0.419205 GT:PL 0/1:51,0,255
Scaffold_1 278600 . C T 98.0078 PASS DP=18;VDB=0.302039;SGB=-0.616816;RPB=0.431591;MQB=0.868815;MQSB=0.618783;BQB=0.918449;MQ0F=0;AF1=0.5;AC1=1;DP4=5,4,5,1;MQ=51;FQ=101.016;PV4=0.58042,1,0.470172,1 GT:PL 0/1:128,0,206
Scaffold_1 278612 . C G 120.008 PASS DP=16;VDB=0.358309;SGB=-0.616816;RPB=0.875173;MQB=0.94925;MQSB=0.778801;BQB=0.967216;MQ0F=0;AF1=0.5;AC1=1;DP4=5,3,5,1;MQ=50;FQ=123.014;PV4=0.58042,1,1,1 GT:PL 0/1:150,0,184
Scaffold_1 278626 . C T 142.008 PASS DP=15;VDB=0.383129;SGB=-0.636426;RPB=0.695312;MQB=0.920266;MQSB=0.898397;BQB=0.961166;MQ0F=0;AF1=0.5;AC1=1;DP4=4,2,5,2;MQ=52;FQ=105.016;PV4=1,1,1,1 GT:PL 0/1:172,0,132
Scaffold_1 278673 . C T 174.009 PASS DP=17;VDB=0.830109;SGB=-0.651104;RPB=0.544441;MQB=0.915545;MQSB=0.366024;BQB=0.978183;MQ0F=0;AF1=0.5;AC1=1;DP4=3,5,5,3;MQ=55;FQ=151.006;PV4=0.61927,1,1,1 GT:PL 0/1:204,0,178
Scaffold_1 278678 . C T 225.011 PASS DP=18;VDB=0.953021;SGB=-0.683931;RPB=0.641825;MQB=0.032027;MQSB=0.184727;BQB=0.895064;MQ0F=0;AF1=0.500158;AC1=1;DP4=2,1,6,7;MQ=53;FQ=6.20452;PV4=1,0.419344,1,1 GT:PL 0/1:255,0,32
Scaffold_1 278739 . G A 32.0097 PASS DP=15;VDB=0.176409;SGB=-0.556411;RPB=0.697593;MQB=0.0211283;MQSB=0.828239;BQB=0.898397;MQ0F=0;AF1=0.5;AC1=1;DP4=5,4,2,2;MQ=50;FQ=35.0165;PV4=1,0.319058,1.81974e-05,1 GT:PL 0/1:62,0,224
Scaffold_1 278818 . C A 122.008 PASS DP=13;VDB=0.372161;SGB=-0.636426;RPB=0.763675;MQB=0.0401934;MQSB=0.356607;BQB=0.442128;MQ0F=0;AF1=0.500013;AC1=1;DP4=3,1,2,5;MQ=47;FQ=16.1222;PV4=0.242424,0.0955496,1,0.292309 GT:PL 0/1:152,0,43
Scaffold_1 278938 . T G 11.3381 PASS DP=7;VDB=0.23997;SGB=-0.556411;RPB=0.202566;MQB=0.405132;BQB=0.810265;MQ0F=0;AF1=0.49998;AC1=1;DP4=0,3,0,4;MQ=51;FQ=14.1831;PV4=1,0.296324,0.0468145,0.121384 GT:PL 0/1:41,0,79
Scaffold_1 278948 . G A 17.0924 PASS DP=8;VDB=0.32;SGB=-0.453602;RPB=0.5;MQB=0.833333;BQB=0.666667;MQ0F=0;AF1=0.499995;AC1=1;DP4=0,6,0,2;MQ=52;FQ=20.058;PV4=1,1,0.380321,1 GT:PL 0/1:47,0,124
Scaffold_1 278954 . C T 17.0924 PASS DP=8;VDB=0.32;SGB=-0.453602;RPB=0.5;MQB=0.833333;BQB=0.5;MQ0F=0;AF1=0.499995;AC1=1;DP4=0,6,0,2;MQ=52;FQ=20.058;PV4=1,0.0390704,0.380321,1 GT:PL 0/1:47,0,132
Scaffold_1 278999 . C T 59.0073 PASS DP=8;VDB=0.23997;SGB=-0.556411;RPB=0.810265;MQB=0.405132;BQB=1.01283;MQ0F=0;AF1=0.5;AC1=1;DP4=0,3,0,4;MQ=51;FQ=50.6834;PV4=1,0.420552,0.0468145,1 GT:PL 0/1:89,0,78
Scaffold_1 279037 . G T 16.1143 PASS DP=5;VDB=0.32;SGB=-0.453602;RPB=0.5;MQB=0.75;BQB=0.5;MQ0F=0;AF1=0.499999;AC1=1;DP4=0,2,0,2;MQ=47;FQ=16.5725;PV4=1,0.211325,1,0.211325 GT:PL 0/1:46,0,47
Scaffold_1 279039 . A G 41.0128 PASS DP=5;VDB=0.497461;SGB=-0.556411;RPB=1;MQB=1;BQB=1;MQ0F=0;AF1=0.500629;AC1=1;DP4=0,1,0,4;MQ=42;FQ=-3.53098;PV4=1,0.342519,0.162867,0.342519 GT:PL 0/1:71,0,26
Scaffold_1 279049 . C T 28.0138 PASS DP=5;VDB=0.32;SGB=-0.453602;RPB=0.5;MQB=0.75;BQB=1;MQ0F=0;AF1=0.500005;AC1=1;DP4=0,2,0,2;MQ=47;FQ=19.7294;PV4=1,1,1,0.232503 GT:PL 0/1:58,0,47
Scaffold_1 279258 . C T 71.5133 PASS DP=4;VDB=0.622417;SGB=-0.556411;MQ0F=0;AF1=1;AC1=2;DP4=0,0,4,0;MQ=60;FQ=-38.9864 GT:PL 1/1:104,12,0
Scaffold_1 279286 . A T 31.0131 PASS DP=6;VDB=0.14;SGB=-0.453602;RPB=0.5;MQB=0;MQSB=0;BQB=0;MQ0F=0;AF1=0.500315;AC1=1;DP4=2,0,0,2;MQ=51;FQ=4.13178;PV4=0.333333,1,0.000297177,1 GT:PL 0/1:61,0,29
Scaffold_1 279318 . A G 30.768 PASS DP=4;VDB=0.36;SGB=-0.453602;MQ0F=0;AF1=1;AC1=2;DP4=0,0,0,2;MQ=40;FQ=-32.988 GT:PL 1/1:62,6,0
Scaffold_1 279626 . C T 82.1931 PASS DP=5;VDB=0.314313;SGB=-0.556411;RPB=1;MQB=1;MQSB=1;BQB=1;MQ0F=0;AF1=1;AC1=2;DP4=1,0,0,4;MQ=51;FQ=-34.9872;PV4=0.2,1,1,1 GT:PL 1/1:114,8,0
Scaffold_1 281497 . A C 114.143 PASS DP=6;VDB=0.465768;SGB=-0.556411;RPB=1;MQB=1;MQSB=0.333333;BQB=1;MQ0F=0;AF1=0.516288;AC1=1;DP4=1,0,2,2;MQ=50;FQ=-15.1212;PV4=1,1,1,1 GT:PL 0/1:144,0,12
Scaffold_1 281514 . T A 114.143 PASS DP=7;VDB=0.446842;SGB=-0.556411;RPB=1;MQB=1;MQSB=0.333333;BQB=1;MQ0F=0;AF1=0.516288;AC1=1;DP4=1,0,2,2;MQ=50;FQ=-15.1212;PV4=1,1,1,0.247513 GT:PL 0/1:144,0,12
Scaffold_1 281539 . T G 57.0754 PASS DP=5;VDB=0.78654;SGB=-0.511536;RPB=1;MQB=1;BQB=1;MQ0F=0;AF1=0.508032;AC1=1;DP4=1,0,3,0;MQ=37;FQ=-12.2521;PV4=1,1,1,0.333333 GT:PL 0/1:87,0,15
Scaffold_1 281550 . A T 45.0754 PASS DP=4;VDB=0.235765;SGB=-0.511536;RPB=1;MQB=1;MQSB=1;BQB=1;MQ0F=0;AF1=0.508032;AC1=1;DP4=1,0,2,1;MQ=37;FQ=-12.2521;PV4=1,0.333333,1,1 GT:PL 0/1:75,0,15
Scaffold_1 282806 . A G 24.7788 PASS DP=2;VDB=0.98;SGB=-0.453602;MQ0F=0;AF1=1;AC1=2;DP4=0,0,2,0;MQ=49;FQ=-32.988 GT:PL 1/1:56,6,0
Scaffold_1 282826 . T G 58.9723 PASS DP=3;VDB=0.0983484;SGB=-0.511536;MQSB=1;MQ0F=0;AF1=1;AC1=2;DP4=0,0,2,1;MQ=35;FQ=-35.9869 GT:PL 1/1:91,9,0
Scaffold_1 282827 . C T 37.7652 PASS DP=3;VDB=0.28;SGB=-0.453602;MQ0F=0;AF1=1;AC1=2;DP4=0,0,2,0;MQ=40;FQ=-32.988 GT:PL 1/1:69,6,0
Scaffold_1 282831 . G A 30.1186 PASS DP=3;VDB=0.28;SGB=-0.453602;RPB=1;MQB=1;MQSB=1;BQB=1;MQ0F=0;AF1=0.512851;AC1=1;DP4=0,1,2,0;MQ=35;FQ=-14.1557;PV4=0.333333,1,1,1 GT:PL 0/1:60,0,13
Scaffold_1 282862 . G A 30.1186 PASS DP=3;VDB=0.28;SGB=-0.453602;RPB=1;MQB=1;MQSB=1;BQB=1;MQ0F=0;AF1=0.512851;AC1=1;DP4=0,1,2,0;MQ=35;FQ=-14.1557;PV4=0.333333,0.333333,1,1 GT:PL 0/1:60,0,13
Scaffold_1 283093 . C T 27.7716 PASS DP=2;VDB=0.26;SGB=-0.453602;MQ0F=0;AF1=1;AC1=2;DP4=0,0,0,2;MQ=37;FQ=-32.988 GT:PL 1/1:59,6,0
Scaffold_1 283096 . T C 36.7654 PASS DP=2;VDB=0.26;SGB=-0.453602;MQ0F=0;AF1=1;AC1=2;DP4=0,0,0,2;MQ=37;FQ=-32.988 GT:PL 1/1:68,6,0
Scaffold_1 283173 . C T 65.1928 PASS DP=5;VDB=0.202231;SGB=-0.556411;RPB=1;MQB=1;MQSB=1;BQB=1;MQ0F=0;AF1=1;AC1=2;DP4=1,0,0,4;MQ=32;FQ=-34.9872;PV4=0.2,1,1,1 GT:PL 1/1:97,8,0
Scaffold_1 283220 . G A 53.1253 PASS DP=4;VDB=0.160333;SGB=-0.511536;RPB=1;MQB=1;MQSB=1;BQB=1;MQ0F=0;AF1=1;AC1=2;DP4=1,0,0,3;MQ=31;FQ=-31.9885;PV4=0.25,1,1,0.333333 GT:PL 1/1:84,5,0
Scaffold_1 285492 . C T 34.0089 PASS DP=9;VDB=0.0257451;SGB=-0.556411;RPB=0.406082;MQB=0.89338;BQB=0.89338;MQ0F=0;AF1=0.50002;AC1=1;DP4=5,0,4,0;MQ=25;FQ=14.1629;PV4=1,1,1,0.144764 GT:PL 0/1:64,0,41
Scaffold_1 285576 . G A 21.0411 PASS DP=16;VDB=0.0615984;SGB=-0.590765;RPB=0.823561;MQB=0.560378;BQB=0.663189;MQ0F=0.25;AF1=0.499998;AC1=1;DP4=11,0,5,0;MQ=21;FQ=23.2455;PV4=1,1,1,1 GT:PL 0/1:51,0,58
Scaffold_1 285591 . C A 22.0341 PASS DP=14;VDB=0.0257451;SGB=-0.556411;RPB=0.0183156;MQB=0.778801;BQB=0.852144;MQ0F=0.285714;AF1=0.499998;AC1=1;DP4=10,0,4,0;MQ=28;FQ=25.0252;PV4=1,1,1,1 GT:PL 0/1:52,0,83
Scaffold_1 285604 . A G 25.0205 PASS DP=14;VDB=0.0562849;SGB=-0.590765;RPB=0.118179;MQB=0.89683;BQB=0.606531;MQ0F=0.285714;AF1=0.499999;AC1=1;DP4=9,0,5,0;MQ=28;FQ=28.015;PV4=1,1,1,0.125181 GT:PL 0/1:55,0,83
Scaffold_1 285609 . C T 14.176 PASS DP=14;VDB=0.428037;SGB=-0.556411;RPB=0.527292;MQB=0.977751;BQB=0.367879;MQ0F=0.285714;AF1=0.49999;AC1=1;DP4=10,0,4,0;MQ=28;FQ=17.1002;PV4=1,0.0200207,1,1 GT:PL 0/1:44,0,89
Scaffold_1 285614 . G A 24.0241 PASS DP=14;VDB=0.109082;SGB=-0.556411;RPB=0.236815;MQB=0.826565;BQB=0.898397;MQ0F=0.285714;AF1=0.499999;AC1=1;DP4=9,0,4,0;MQ=29;FQ=27.0209;PV4=1,0.302959,1,0.000285815 GT:PL 0/1:54,0,86
Scaffold_1 285707 . C T 45.0072 PASS DP=18;VDB=0.308315;SGB=-0.590765;RPB=0.245601;MQB=0.885629;MQSB=0.476528;BQB=0.970092;MQ0F=0.166667;AF1=0.5;AC1=1;DP4=10,3,2,3;MQ=33;FQ=48.0153;PV4=0.268207,0.132285,1,1 GT:PL 0/1:75,0,168
Scaffold_1 285708 . G A 100.008 PASS DP=19;VDB=0.00712345;SGB=-0.680642;RPB=0.120935;MQB=0.965874;MQSB=0.371614;BQB=0.99446;MQ0F=0.210526;AF1=0.5;AC1=1;DP4=2,3,9,3;MQ=33;FQ=58.0153;PV4=0.280058,1,0.21269,0.300484 GT:PL 0/1:130,0,85
Scaffold_1 285712 . A T 51.0072 PASS DP=20;VDB=0.741566;SGB=-0.616816;RPB=0.332192;MQB=0.537999;MQSB=0.333737;BQB=0.207572;MQ0F=0.25;AF1=0.5;AC1=1;DP4=9,5,2,4;MQ=32;FQ=54.0154;PV4=0.335913,0.0120584,1,0.453982 GT:PL 0/1:81,0,159
Scaffold_1 285786 . G C 16.1143 PASS DP=35;VDB=0.0221831;SGB=-0.651104;RPB=0.00233299;MQB=0.527213;MQSB=0.292882;BQB=0.579578;MQ0F=0.257143;AF1=0.499994;AC1=1;DP4=10,14,5,3;MQ=28;FQ=19.069;PV4=0.423458,1,1,0.243116 GT:PL 0/1:46,0,212
Scaffold_1 285798 . C T 13.2188 PASS DP=33;VDB=0.0943152;SGB=-0.636426;RPB=1;MQB=0.827496;MQSB=0.243669;BQB=0.442841;MQ0F=0.242424;AF1=0.499987;AC1=1;DP4=13,12,2,5;MQ=29;FQ=16.1222;PV4=0.4025,1,1,1 GT:PL 0/1:43,0,215
Scaffold_1 285804 . T G 78.0075 PASS DP=33;VDB=0.102965;SGB=-0.651104;RPB=0.735784;MQB=0.71045;MQSB=0.243669;BQB=0.579578;MQ0F=0.242424;AF1=0.5;AC1=1;DP4=12,12,3,5;MQ=29;FQ=81.0157;PV4=0.691138,1,1,1 GT:PL 0/1:108,0,218
Scaffold_1 285818 . C T 58.0073 PASS DP=34;VDB=0.0977173;SGB=-0.651104;RPB=0.968735;MQB=0.71497;MQSB=0.421326;BQB=0.639741;MQ0F=0.205882;AF1=0.5;AC1=1;DP4=14,11,3,5;MQ=29;FQ=61.0154;PV4=0.438433,0.157719,1,1 GT:PL 0/1:88,0,224
Scaffold_1 285822 . A C 17.0924 PASS DP=34;VDB=0.00331955;SGB=-0.636426;RPB=0.0434978;MQB=0.904181;MQSB=0.311069;BQB=0.993049;MQ0F=0.205882;AF1=0.499995;AC1=1;DP4=10,14,7,0;MQ=28;FQ=20.058;PV4=0.00870103,1,1,1 GT:PL 0/1:47,0,215
Scaffold_1 285829 . T C 58.0073 PASS DP=33;VDB=0.034899;SGB=-0.670168;RPB=0.898801;MQB=0.997825;MQSB=0.571578;BQB=0.599334;MQ0F=0.181818;AF1=0.5;AC1=1;DP4=12,8,3,7;MQ=29;FQ=61.0154;PV4=0.245077,0.0531812,1,1 GT:PL 0/1:88,0,219
Scaffold_1 285861 . T C 20.0499 PASS DP=25;VDB=0.316324;SGB=-0.590765;RPB=0.919406;MQB=0.245061;MQSB=0.31527;BQB=0.997226;MQ0F=0.24;AF1=0.499997;AC1=1;DP4=5,13,5,0;MQ=25;FQ=23.0366;PV4=0.00748908,0.153919,1,1 GT:PL 0/1:50,0,154
Scaffold_1 285956 . T C 11.3386 PASS DP=9;VDB=0.64;SGB=-0.453602;RPB=0;MQB=0.5;MQSB=0.5;BQB=0.875;MQ0F=0.333333;AF1=0.500043;AC1=1;DP4=2,2,0,2;MQ=24;FQ=8.48524;PV4=0.466667,1,1,1 GT:PL 0/1:41,0,36
Scaffold_1 286087 . C G 57.0073 PASS DP=23;VDB=0.0738748;SGB=-0.662043;RPB=0.960618;MQB=0.999504;MQSB=0.184878;BQB=0.931063;MQ0F=0.0869565;AF1=0.5;AC1=1;DP4=5,9,2,7;MQ=28;FQ=60.0154;PV4=0.65702,0.47164,1,1 GT:PL 0/1:87,0,145
Scaffold_1 286132 . C T 11.3381 PASS DP=32;VDB=0.933681;SGB=-0.616816;RPB=0.911418;MQB=0.825582;MQSB=0.287609;BQB=0.982403;MQ0F=0.09375;AF1=0.49998;AC1=1;DP4=10,13,3,3;MQ=29;FQ=14.1838;PV4=1,0.218777,0.295527,0.105334 GT:PL 0/1:41,0,241
Scaffold_1 286154 . G A 178.009 PASS DP=27;VDB=0.0331699;SGB=-0.691153;RPB=0.606531;MQB=0.981273;MQSB=0.367758;BQB=0.969233;MQ0F=0.0740741;AF1=0.5;AC1=1;DP4=3,5,11,7;MQ=29;FQ=68.0155;PV4=0.400915,1,0.374774,1 GT:PL 0/1:208,0,95
Scaffold_1 286155 . C T 150.008 PASS DP=27;VDB=0.0999675;SGB=-0.686358;RPB=0.697593;MQB=0.71275;MQSB=0.247299;BQB=0.558035;MQ0F=0.0740741;AF1=0.5;AC1=1;DP4=6,6,8,6;MQ=30;FQ=115.015;PV4=1,0.134511,1,1 GT:PL 0/1:180,0,142
Scaffold_1 286163 . A C 171.009 PASS DP=25;VDB=0.0111211;SGB=-0.690438;RPB=0.743365;MQB=0.997552;MQSB=0.597127;BQB=0.999387;MQ0F=0.08;AF1=0.5;AC1=1;DP4=2,4,10,7;MQ=30;FQ=43.0154;PV4=0.370709,0.444394,0.447914,0.282344 GT:PL 0/1:201,0,70
Scaffold_1 286193 . A G 18.0749 PASS DP=26;VDB=0.14314;SGB=-0.590765;RPB=0.647894;MQB=0.98895;MQSB=0.316472;BQB=0.798516;MQ0F=0.0769231;AF1=0.499996;AC1=1;DP4=13,5,2,3;MQ=29;FQ=21.0492;PV4=0.296859,0.187547,1,0.413674 GT:PL 0/1:48,0,203
Scaffold_1 286233 . G A 25.0205 PASS DP=15;VDB=0.543918;SGB=-0.590765;RPB=0.526122;MQB=0.99115;MQSB=0.960789;BQB=0.83527;MQ0F=0.0666667;AF1=0.499999;AC1=1;DP4=7,2,3,2;MQ=25;FQ=28.0205;PV4=0.58042,1,1,1 GT:PL 0/1:55,0,90
Scaffold_1 286355 . C T 20.0499 PASS DP=15;VDB=0.202231;SGB=-0.556411;RPB=0.94394;MQB=1;MQSB=0.594978;BQB=0.793923;MQ0F=0.266667;AF1=0.499997;AC1=1;DP4=3,5,1,3;MQ=24;FQ=23.0362;PV4=1,1,1,1 GT:PL 0/1:50,0,91
Scaffold_1 286367 . C T 16.1143 PASS DP=15;VDB=0.345017;SGB=-0.590765;RPB=0.89683;MQB=0.99778;MQSB=0.527292;BQB=0.965069;MQ0F=0.266667;AF1=0.499994;AC1=1;DP4=3,6,1,4;MQ=22;FQ=19.0687;PV4=1,0.277447,1,1 GT:PL 0/1:46,0,87
Scaffold_1 286373 . T G 22.0341 PASS DP=15;VDB=0.345017;SGB=-0.590765;RPB=0.584657;MQB=0.935451;MQSB=0.594978;BQB=0.935451;MQ0F=0.266667;AF1=0.499998;AC1=1;DP4=3,4,1,4;MQ=24;FQ=25.0265;PV4=0.575758,0.207056,0.475412,1 GT:PL 0/1:52,0,85
Scaffold_1 286386 . T C 11.3381 PASS DP=19;VDB=0.976494;SGB=-0.511536;RPB=0.513417;MQB=0.390587;MQSB=0.808101;BQB=0.91051;MQ0F=0.263158;AF1=0.49998;AC1=1;DP4=4,8,0,3;MQ=26;FQ=14.1838;PV4=0.516484,1,1,0.175683 GT:PL 0/1:41,0,132
Scaffold_1 286412 . A G 40.0075 PASS DP=18;VDB=0.693673;SGB=-0.590765;RPB=0.960687;MQB=0.851779;MQSB=0.732962;BQB=0.560378;MQ0F=0.277778;AF1=0.5;AC1=1;DP4=3,8,1,4;MQ=25;FQ=43.0068;PV4=1,1,1,1 GT:PL 0/1:70,0,97
Scaffold_1 286781 . C T 85.0618 PASS DP=5;VDB=0.548121;SGB=-0.556411;RPB=1;MQB=1;MQSB=0.333333;BQB=1;MQ0F=0;AF1=0.50636;AC1=1;DP4=0,1,2,2;MQ=35;FQ=-11.3185;PV4=1,1,1,1 GT:PL 0/1:115,0,16
Scaffold_1 286798 . A G 29.0123 PASS DP=5;VDB=0.14;SGB=-0.453602;RPB=0;MQB=0.333333;MQSB=0.333333;BQB=1;MQ0F=0;AF1=0.5;AC1=1;DP4=0,3,2,0;MQ=35;FQ=31.0452;PV4=0.1,1,1,1 GT:PL 0/1:59,0,65
Scaffold_1 286801 . C T 48.0072 PASS DP=6;VDB=0.519801;SGB=-0.511536;RPB=0.28717;MQB=0.28717;MQSB=0.75;BQB=0.574341;MQ0F=0;AF1=0.5;AC1=1;DP4=0,3,2,1;MQ=40;FQ=35.881;PV4=0.4,0.118898,1,0.392636 GT:PL 0/1:78,0,63
Scaffold_1 286813 . A G 69.0085 PASS DP=5;VDB=0.509904;SGB=-0.511536;RPB=0;MQB=0;MQSB=0.666667;BQB=0.5;MQ0F=0;AF1=0.500125;AC1=1;DP4=0,2,2,1;MQ=40;FQ=6.98502;PV4=0.4,1,1,0.247513 GT:PL 0/1:99,0,33
Scaffold_1 287218 . T C 222 PASS DP=13;VDB=0.143809;SGB=-0.683931;MQSB=0.863636;MQ0F=0;AF1=1;AC1=2;DP4=0,0,2,11;MQ=51;FQ=-65.9862 GT:PL 1/1:255,39,0
Scaffold_1 287227 . T C 197.001 PASS DP=12;VDB=0.062013;SGB=-0.680642;MQSB=1;MQ0F=0;AF1=1;AC1=2;DP4=0,0,1,11;MQ=51;FQ=-62.9862 GT:PL 1/1:230,36,0
Scaffold_1 287303 . T C 32.011 PASS DP=6;VDB=0.06;SGB=-0.453602;RPB=0;MQB=0.5;MQSB=0.5;BQB=0.5;MQ0F=0.333333;AF1=0.500158;AC1=1;DP4=2,0,0,2;MQ=35;FQ=6.20122;PV4=0.333333,0.211325,1,0.00606083 GT:PL 0/1:62,0,32
Scaffold_1 287356 . C T 29.0141 PASS DP=6;VDB=0.02;SGB=-0.453602;RPB=0.666667;MQB=0.333333;BQB=0.666667;MQ0F=0.333333;AF1=0.500198;AC1=1;DP4=3,0,2,0;MQ=31;FQ=5.46103;PV4=1,0.247513,1,1 GT:PL 0/1:59,0,31
Scaffold_1 287461 . A G 44.0127 PASS DP=5;VDB=0.568985;SGB=-0.511536;RPB=0.333333;MQB=0.666667;MQSB=1;BQB=0.666667;MQ0F=0;AF1=0.500629;AC1=1;DP4=1,1,3,0;MQ=33;FQ=-3.53095;PV4=0.4,0.285383,1,0.109551 GT:PL 0/1:74,0,26
Scaffold_1 287698 . T C 58.0074 PASS DP=9;VDB=0.794163;SGB=-0.556411;RPB=0.62023;MQB=0.248092;MQSB=0.248092;BQB=0.62023;MQ0F=0;AF1=0.50001;AC1=1;DP4=0,4,4,0;MQ=45;FQ=17.1002;PV4=0.0285714,0.0970891,1,0.0684676 GT:PL 0/1:88,0,44
Scaffold_1 287704 . G T 21.0411 PASS DP=9;VDB=0.38;SGB=-0.453602;RPB=0.2;MQB=0.7;MQSB=0.7;BQB=0.8;MQ0F=0;AF1=0.499998;AC1=1;DP4=0,5,2,0;MQ=41;FQ=23.9248;PV4=0.047619,1,1,0.0586934 GT:PL 0/1:51,0,67
Scaffold_1 287730 . T G 22.0341 PASS DP=8;VDB=0.1;SGB=-0.453602;RPB=0.4;MQB=0.4;MQSB=0.4;BQB=0.7;MQ0F=0;AF1=0.499998;AC1=1;DP4=2,3,0,2;MQ=42;FQ=24.9944;PV4=1,1,1,1 GT:PL 0/1:52,0,73
Scaffold_1 287744 . A T 23.0285 PASS DP=6;VDB=0.1;SGB=-0.453602;RPB=0.666667;MQB=0.666667;MQSB=1;BQB=0.833333;MQ0F=0;AF1=0.500002;AC1=1;DP4=1,2,0,2;MQ=46;FQ=20.5975;PV4=1,0.39439,1,1 GT:PL 0/1:53,0,49
Scaffold_1 289069 . C T 22.0341 PASS DP=13;VDB=0.469001;SGB=-0.616816;RPB=0.813189;MQB=0.0169414;MQSB=0.4;BQB=0.864013;MQ0F=0;AF1=0.499998;AC1=1;DP4=4,2,6,0;MQ=46;FQ=25.0286;PV4=0.454545,0.175953,4.18022e-05,0.442567 GT:PL 0/1:52,0,166
Scaffold_1 289096 . A G 52.0072 PASS DP=13;VDB=0.539658;SGB=-0.636426;RPB=0.935451;MQB=0.0584657;MQSB=1;BQB=0.935451;MQ0F=0;AF1=0.5;AC1=1;DP4=4,1,7,0;MQ=46;FQ=55.0153;PV4=0.416667,0.275552,0.00233072,1 GT:PL 0/1:82,0,133
Scaffold_1 289188 . A G 67.0074 PASS DP=15;VDB=0.409395;SGB=-0.590765;RPB=0.411112;MQB=0.726149;MQSB=0.977751;BQB=0.486752;MQ0F=0;AF1=0.5;AC1=1;DP4=5,4,5,0;MQ=57;FQ=70.0155;PV4=0.220779,0.0418126,0.0922742,1 GT:PL 0/1:97,0,229
Scaffold_1 289207 . C T 57.0073 PASS DP=17;VDB=0.622417;SGB=-0.556411;RPB=0.269146;MQB=0.97357;MQSB=0.635922;BQB=0.511891;MQ0F=0;AF1=0.5;AC1=1;DP4=5,4,3,1;MQ=57;FQ=60.0154;PV4=1,0.0480564,0.159815,0.0193301 GT:PL 0/1:87,0,238
Scaffold_1 289229 . C T 179.009 PASS DP=19;VDB=0.0019282;SGB=-0.662043;RPB=0.0203735;MQB=0.77073;MQSB=0.195976;BQB=0.715702;MQ0F=0;AF1=0.5;AC1=1;DP4=5,3,5,4;MQ=56;FQ=140.016;PV4=1,1,1,1 GT:PL 0/1:209,0,167
Scaffold_1 289254 . G A 213.009 PASS DP=20;VDB=0.974513;SGB=-0.670168;RPB=0.393241;MQB=0.621145;MQSB=0.30569;BQB=0.989343;MQ0F=0;AF1=0.5;AC1=1;DP4=4,3,5,5;MQ=56;FQ=144.016;PV4=1,1,1,0.00536548 GT:PL 0/1:243,0,171
Scaffold_1 289264 . C T 108.008 PASS DP=17;VDB=0.0367379;SGB=-0.651104;RPB=0.544441;MQB=0.671368;MQSB=0.333524;BQB=0.184727;MQ0F=0;AF1=0.5;AC1=1;DP4=3,5,4,4;MQ=56;FQ=111.016;PV4=1,0.00891171,0.106774,1 GT:PL 0/1:138,0,191
Scaffold_1 289282 . C G 138.008 PASS DP=11;VDB=0.0396485;SGB=-0.636426;RPB=0.0916482;MQB=0.641538;MQSB=0.167959;BQB=0.641538;MQ0F=0;AF1=0.5;AC1=1;DP4=2,1,4,3;MQ=55;FQ=60.0154;PV4=1,0.132732,0.136894,0.272369 GT:PL 0/1:168,0,87
Scaffold_1 289295 . T G 183.009 PASS DP=11;VDB=0.0367379;SGB=-0.651104;RPB=0.124514;MQB=0.655816;MQSB=0.297172;BQB=0.979382;MQ0F=0;AF1=0.5;AC1=1;DP4=2,1,4,4;MQ=56;FQ=54.0154;PV4=1,1,0.155475,0.284161 GT:PL 0/1:213,0,81
Scaffold_1 289323 . G T 147.008 PASS DP=13;VDB=0.283845;SGB=-0.636426;RPB=0.253351;MQB=0.506703;MQSB=0.506703;BQB=0.760054;MQ0F=0;AF1=0.5;AC1=1;DP4=2,3,3,4;MQ=56;FQ=116.014;PV4=1,0.135981,0.0763108,1 GT:PL 0/1:177,0,143
Scaffold_1 289554 . C G 225.009 PASS DP=19;VDB=0.00420137;SGB=-0.670168;RPB=0.41985;MQB=0.943335;MQSB=0.887766;BQB=0.99881;MQ0F=0;AF1=0.5;AC1=1;DP4=4,3,6,4;MQ=60;FQ=147.017;PV4=1,1,0.21021,1 GT:PL 0/1:255,0,174
Scaffold_1 289558 . C T 199.009 PASS DP=18;VDB=0.0147801;SGB=-0.662043;RPB=0.446318;MQB=1;MQSB=1;BQB=0.789232;MQ0F=0;AF1=0.5;AC1=1;DP4=4,3,6,3;MQ=60;FQ=146.016;PV4=1,1,1,1 GT:PL 0/1:229,0,173
Scaffold_1 289657 . C T 219.009 PASS DP=20;VDB=0.923075;SGB=-0.676189;RPB=0.86274;MQB=1;MQSB=1;BQB=0.86274;MQ0F=0;AF1=0.5;AC1=1;DP4=3,4,7,4;MQ=60;FQ=155.017;PV4=0.630468,0.172654,1,1 GT:PL 0/1:249,0,182
Scaffold_1 289954 . A G 167.009 PASS DP=15;VDB=0.538025;SGB=-0.651104;RPB=0.998327;MQB=0.128634;MQSB=0.605479;BQB=0.68614;MQ0F=0;AF1=0.5;AC1=1;DP4=3,4,3,5;MQ=55;FQ=152.931;PV4=1,1,0.0115949,1 GT:PL 0/1:197,0,180
Scaffold_1 290031 . T C 99.0078 PASS DP=16;VDB=0.0513395;SGB=-0.590765;RPB=0.0561348;MQB=0.011109;MQSB=0.99778;BQB=0.411112;MQ0F=0;AF1=0.5;AC1=1;DP4=6,3,3,2;MQ=54;FQ=102.016;PV4=1,1,2.15406e-05,0.435939 GT:PL 0/1:129,0,215
Scaffold_1 290273 . A G 81.0075 PASS DP=16;VDB=0.669454;SGB=-0.590765;RPB=0.472367;MQB=0.0497871;MQSB=0.569783;BQB=0.970446;MQ0F=0;AF1=0.5;AC1=1;DP4=2,8,4,1;MQ=55;FQ=84.0157;PV4=0.0889111,1,8.89261e-05,1 GT:PL 0/1:111,0,218
Scaffold_1 290650 . G T 41.0074 PASS DP=13;VDB=0.745967;SGB=-0.556411;RPB=0.643095;MQB=0.0401934;MQSB=0.0297172;BQB=0.643095;MQ0F=0;AF1=0.5;AC1=1;DP4=5,2,0,4;MQ=49;FQ=44.0154;PV4=0.0606061,0.0765705,0.00440238,0.281843 GT:PL 0/1:71,0,189
Scaffold_1 308800 . G A 137.264 PASS DP=7;VDB=0.713234;SGB=-0.590765;MQSB=0.666667;MQ0F=0;AF1=1;AC1=2;DP4=0,0,2,3;MQ=57;FQ=-41.9862 GT:PL 1/1:170,15,0
Scaffold_1 319906 . C A 16.1143 PASS DP=10;VDB=0.02;SGB=-0.453602;RPB=0.5;MQB=1;MQSB=1.00775;BQB=0.75;MQ0F=0;AF1=0.499994;AC1=1;DP4=6,2,0,2;MQ=60;FQ=19.069;PV4=0.133333,1,1,1 GT:PL 0/1:46,0,195
Scaffold_1 349260 . G A 121.264 PASS DP=6;VDB=0.0161322;SGB=-0.590765;MQSB=1;MQ0F=0;AF1=1;AC1=2;DP4=0,0,3,2;MQ=60;FQ=-41.9862 GT:PL 1/1:154,15,0
Scaffold_1 350428 . C T 22.0341 PASS DP=10;VDB=0.1;SGB=-0.453602;RPB=0;MQB=0.833333;MQSB=0.666667;BQB=0.166667;MQ0F=0;AF1=0.499998;AC1=1;DP4=4,2,2,0;MQ=55;FQ=25.0286;PV4=1,1,0.332536,0.269413 GT:PL 0/1:52,0,144
Scaffold_1 350438 . C A 19.061 PASS DP=10;VDB=0.1;SGB=-0.453602;RPB=0;MQB=0.857143;MQSB=0.577865;BQB=0.285714;MQ0F=0;AF1=0.499997;AC1=1;DP4=4,3,2,0;MQ=55;FQ=22.0421;PV4=0.5,1,0.346218,1 GT:PL 0/1:49,0,161
Scaffold_1 350451 . C T 90.0077 PASS DP=9;VDB=0.0213352;SGB=-0.556411;RPB=0.124046;MQB=0.868321;MQSB=0.62023;BQB=0.868321;MQ0F=0;AF1=0.5;AC1=1;DP4=2,2,2,2;MQ=53;FQ=83.5007;PV4=1,1,0.2292,1 GT:PL 0/1:120,0,111
Scaffold_1 350503 . C G 18.0749 PASS DP=9;VDB=0.38;SGB=-0.453602;RPB=0.166667;MQB=0.75;MQSB=0.750668;BQB=1;MQ0F=0;AF1=0.499996;AC1=1;DP4=3,3,0,2;MQ=53;FQ=21.0492;PV4=0.464286,1,0.336909,0.0427164 GT:PL 0/1:48,0,164
Scaffold_1 350508 . T C 21.0411 PASS DP=9;VDB=0.38;SGB=-0.453602;RPB=0.166667;MQB=0.75;MQSB=0.750668;BQB=0.666667;MQ0F=0;AF1=0.499998;AC1=1;DP4=3,3,0,2;MQ=53;FQ=24.0321;PV4=0.464286,1,0.336909,0.0415566 GT:PL 0/1:51,0,178
Scaffold_1 356077 . G C 16.1143 PASS DP=10;VDB=0.02;SGB=-0.453602;RPB=0.5;MQB=1;MQSB=1.00775;BQB=0.5;MQ0F=0;AF1=0.499994;AC1=1;DP4=4,4,0,2;MQ=60;FQ=19.069;PV4=0.466667,1,1,1 GT:PL 0/1:46,0,203
Scaffold_1 361134 . C A 19.061 PASS DP=9;VDB=0.02;SGB=-0.453602;RPB=0.285714;MQB=1;MQSB=1;BQB=0.714286;MQ0F=0;AF1=0.499997;AC1=1;DP4=2,5,0,2;MQ=60;FQ=22.0421;PV4=1,1,1,0.112699 GT:PL 0/1:49,0,188
Scaffold_1 370422 . C T 94.1986 PASS DP=8;VDB=0.592802;SGB=-0.590765;RPB=0;MQB=0.2;MQSB=1;BQB=0.7;MQ0F=0.125;AF1=0.730437;AC1=1;DP4=2,0,4,1;MQ=40;FQ=-24.9994;PV4=1,1,1,1 GT:PL 0/1:123,0,2
Scaffold_1 371549 . G A 10.42 PASS DP=10;VDB=0.28;SGB=-0.453602;RPB=0.666667;MQB=0.166667;MQSB=0.166667;BQB=0.833333;MQ0F=0;AF1=0.499975;AC1=1;DP4=0,6,2,0;MQ=51;FQ=13.2265;PV4=0.0357143,0.380126,0.0477043,1 GT:PL 0/1:40,0,133
Scaffold_1 371599 . G A 27.0155 PASS DP=10;VDB=0.364077;SGB=-0.511536;RPB=0.115573;MQB=0.231146;MQSB=0.577865;BQB=0.924584;MQ0F=0;AF1=0.499999;AC1=1;DP4=3,3,3,0;MQ=43;FQ=30.0194;PV4=0.464286,1,0.0410653,0.0852353 GT:PL 0/1:57,0,166
Scaffold_1 371830 . T G 177.009 PASS DP=16;VDB=0.0694872;SGB=-0.651104;RPB=0.039122;MQB=0.180092;MQSB=0.99308;BQB=0.444739;MQ0F=0;AF1=0.5;AC1=1;DP4=4,3,5,3;MQ=53;FQ=133.016;PV4=1,1,1,1 GT:PL 0/1:207,0,160
Scaffold_1 371835 . G A 126.008 PASS DP=15;VDB=0.278975;SGB=-0.636426;RPB=0.039122;MQB=0.180092;MQSB=0.99308;BQB=0.993326;MQ0F=0;AF1=0.5;AC1=1;DP4=5,3,4,3;MQ=53;FQ=129.016;PV4=1,0.203281,0.0261916,0.467009 GT:PL 0/1:156,0,210
Scaffold_1 371847 . G A 110.008 PASS DP=15;VDB=0.236588;SGB=-0.616816;RPB=0.0672055;MQB=0.0899651;MQSB=0.980199;BQB=0.703221;MQ0F=0;AF1=0.5;AC1=1;DP4=5,3,4,2;MQ=52;FQ=113.016;PV4=1,1,0.0125937,1 GT:PL 0/1:140,0,190
Scaffold_1 371849 . C A 131.008 PASS DP=14;VDB=0.281405;SGB=-0.636426;RPB=0.0628765;MQB=0.240074;MQSB=0.980199;BQB=0.925999;MQ0F=0;AF1=0.5;AC1=1;DP4=5,2,4,3;MQ=52;FQ=133.881;PV4=1,1,0.0396264,1 GT:PL 0/1:161,0,176
Scaffold_1 371881 . T G 131.008 PASS DP=14;VDB=0.958818;SGB=-0.616816;RPB=0.623736;MQB=0.899815;MQSB=0.470358;BQB=0.899815;MQ0F=0;AF1=0.5;AC1=1;DP4=4,3,3,3;MQ=49;FQ=124.501;PV4=1,1,1,0.209854 GT:PL 0/1:161,0,152
Scaffold_1 371896 . T C 125.008 PASS DP=12;VDB=0.293058;SGB=-0.616816;RPB=0.71154;MQB=0.931779;MQSB=0.47436;BQB=0.372712;MQ0F=0;AF1=0.5;AC1=1;DP4=3,3,3,3;MQ=49;FQ=118.501;PV4=1,1,0.270943,1 GT:PL 0/1:155,0,146
Scaffold_1 371905 . T G 54.0072 PASS DP=10;VDB=0.112085;SGB=-0.556411;RPB=0.559863;MQB=0.727822;MQSB=0.238087;BQB=0.895781;MQ0F=0;AF1=0.5;AC1=1;DP4=3,3,2,2;MQ=48;FQ=57.0154;PV4=1,0.230508,1,1 GT:PL 0/1:84,0,171
Scaffold_1 371933 . C G 55.0072 PASS DP=8;VDB=0.0279572;SGB=-0.511536;RPB=0.202566;MQB=0.405132;MQSB=0.405132;BQB=0.810265;MQ0F=0;AF1=0.5;AC1=1;DP4=1,3,2,1;MQ=51;FQ=58.0143;PV4=0.485714,0.291236,1,1 GT:PL 0/1:85,0,121
Scaffold_1 371987 . G A 11.3381 PASS DP=9;VDB=0.56;SGB=-0.453602;RPB=0.571429;MQB=1;MQSB=0.730948;BQB=0.785714;MQ0F=0;AF1=0.49998;AC1=1;DP4=4,3,0,2;MQ=39;FQ=14.1838;PV4=0.444444,0.335509,1,0.366106 GT:PL 0/1:41,0,155
Scaffold_1 372002 . A T 150.008 PASS DP=11;VDB=0.996724;SGB=-0.636426;RPB=0.924449;MQB=0.361741;MQSB=0.361741;BQB=0.924449;MQ0F=0;AF1=0.5;AC1=1;DP4=2,2,2,5;MQ=37;FQ=44.0154;PV4=0.575758,0.239498,1,0.0151359 GT:PL 0/1:180,0,71
Scaffold_1 372034 . G A 179.009 PASS DP=14;VDB=0.138791;SGB=-0.662043;RPB=0.096972;MQB=0.381255;MQSB=0.50373;BQB=0.928296;MQ0F=0;AF1=0.5;AC1=1;DP4=2,2,3,6;MQ=37;FQ=39.0157;PV4=1,0.213373,1,0.0611802 GT:PL 0/1:209,0,66
Scaffold_1 372045 . T C 11.3381 PASS DP=14;VDB=0.56;SGB=-0.453602;RPB=0.444444;MQB=0.777778;MQSB=0.564628;BQB=0.444444;MQ0F=0;AF1=0.49998;AC1=1;DP4=5,4,0,2;MQ=37;FQ=14.1838;PV4=0.454545,1,1,1 GT:PL 0/1:41,0,182
Scaffold_1 372071 . C T 193.009 PASS DP=15;VDB=0.0199125;SGB=-0.670168;RPB=0.0183156;MQB=0.367879;MQSB=0.486752;BQB=0.612626;MQ0F=0;AF1=0.5;AC1=1;DP4=2,2,3,7;MQ=38;FQ=36.0162;PV4=0.58042,0.050432,1,1 GT:PL 0/1:223,0,63
Scaffold_1 372081 . G A 218.009 PASS DP=17;VDB=0.065806;SGB=-0.680642;RPB=0.346864;MQB=0.913864;MQSB=0.460027;BQB=0.88901;MQ0F=0;AF1=0.5;AC1=1;DP4=1,3,4,8;MQ=38;FQ=41.0155;PV4=1,0.106031,1,1 GT:PL 0/1:248,0,68
Scaffold_1 373438 . C T 161.639 PASS DP=10;VDB=0.39697;SGB=-0.636426;RPB=1;MQB=0;MQSB=0.924584;BQB=0.714286;MQ0F=0.1;AF1=1;AC1=2;DP4=0,2,3,4;MQ=37;FQ=-37.9865;PV4=0.5,1,1,0.297296 GT:PL 1/1:194,11,0
Scaffold_1 373440 . G T 157.639 PASS DP=10;VDB=0.419382;SGB=-0.636426;RPB=1;MQB=0;MQSB=0.924584;BQB=0.714286;MQ0F=0.1;AF1=1;AC1=2;DP4=0,2,3,4;MQ=37;FQ=-37.9865;PV4=0.5,1,1,0.313142 GT:PL 1/1:190,11,0
Scaffold_1 373464 . G A 169.639 PASS DP=9;VDB=0.0469269;SGB=-0.636426;RPB=0.857143;MQB=0;MQSB=0.5;BQB=1;MQ0F=0.111111;AF1=1;AC1=2;DP4=0,2,2,5;MQ=37;FQ=-37.9865;PV4=1,1,1,0.382776 GT:PL 1/1:202,11,0
Scaffold_1 373494 . G A 130.514 PASS DP=7;VDB=0.0248912;SGB=-0.616816;RPB=1;MQB=1;MQSB=0.7;BQB=1;MQ0F=0;AF1=1;AC1=2;DP4=0,1,2,4;MQ=39;FQ=-38.9864;PV4=1,0.271782,1,0.360486 GT:PL 1/1:163,12,0
Scaffold_1 373538 . G A 222.008 PASS DP=11;VDB=0.470677;SGB=-0.670168;MQSB=0.523791;MQ0F=0;AF1=1;AC1=2;DP4=0,0,5,5;MQ=51;FQ=-56.9861 GT:PL 1/1:255,30,0
Scaffold_1 373767 . C T 65.5132 PASS DP=5;VDB=0.828494;SGB=-0.556411;MQSB=0.5;MQ0F=0;AF1=1;AC1=2;DP4=0,0,2,2;MQ=31;FQ=-38.9864 GT:PL 1/1:98,12,0
Scaffold_1 373952 . G A 104.032 PASS DP=8;VDB=0.235174;SGB=-0.651104;MQSB=0.333333;MQ0F=0;AF1=1;AC1=2;DP4=0,0,6,2;MQ=25;FQ=-50.986 GT:PL 1/1:137,24,0
Scaffold_1 383596 . G T 28.0137 PASS DP=7;VDB=0.02;SGB=-0.453602;RPB=1;MQB=1;MQSB=0.861511;BQB=0.5;MQ0F=0;AF1=0.5;AC1=1;DP4=1,3,2,0;MQ=60;FQ=31.0185;PV4=0.4,1,1,1 GT:PL 0/1:58,0,113
Scaffold_1 390061 . A G 23.0285 PASS DP=7;VDB=0.02;SGB=-0.453602;RPB=0.5;MQB=0;MQSB=0.5;BQB=0.75;MQ0F=0;AF1=0.499999;AC1=1;DP4=2,2,2,0;MQ=55;FQ=26.0258;PV4=0.466667,0.316406,0.00245651,1 GT:PL 0/1:53,0,129
Scaffold_1 390069 . A G 21.0411 PASS DP=8;VDB=0.02;SGB=-0.453602;RPB=0.666667;MQB=0;MQSB=0.600535;BQB=0.833333;MQ0F=0;AF1=0.499998;AC1=1;DP4=3,3,2,0;MQ=57;FQ=24.0321;PV4=0.464286,1,0.000167626,1 GT:PL 0/1:51,0,175
Scaffold_1 390085 . G A 20.0499 PASS DP=6;VDB=0.02;SGB=-0.453602;RPB=1;MQB=0;MQSB=0.28717;BQB=0.5;MQ0F=0;AF1=0.499997;AC1=1;DP4=1,3,2,0;MQ=55;FQ=23.0366;PV4=0.4,0.0889039,0.00245651,1 GT:PL 0/1:50,0,128
Scaffold_1 390088 . C T 20.0499 PASS DP=6;VDB=0.02;SGB=-0.453602;RPB=1;MQB=0;MQSB=0.28717;BQB=0.625;MQ0F=0;AF1=0.499997;AC1=1;DP4=1,3,2,0;MQ=55;FQ=23.0366;PV4=0.4,0.163555,0.00245651,1 GT:PL 0/1:50,0,124
Scaffold_1 390089 . A G 23.0285 PASS DP=6;VDB=0.02;SGB=-0.453602;RPB=1;MQB=0;MQSB=0.28717;BQB=0.5;MQ0F=0;AF1=0.499999;AC1=1;DP4=1,3,2,0;MQ=55;FQ=26.0258;PV4=0.4,0.0889039,0.00245651,1 GT:PL 0/1:53,0,128
Scaffold_1 390106 . G A 19.061 PASS DP=8;VDB=0.02;SGB=-0.453602;RPB=0.666667;MQB=0;MQSB=0.62023;BQB=0.666667;MQ0F=0;AF1=0.499997;AC1=1;DP4=2,4,2,0;MQ=57;FQ=22.0421;PV4=0.428571,1,0.000167626,1 GT:PL 0/1:49,0,151
Scaffold_1 391609 . G A 179.457 PASS DP=11;VDB=0.819559;SGB=-0.662043;RPB=1;MQB=1;MQSB=1.00775;BQB=1;MQ0F=0;AF1=1;AC1=2;DP4=0,1,4,5;MQ=42;FQ=-33.9875;PV4=1,0.240642,1,0.272028 GT:PL 1/1:211,7,0
Scaffold_1 391694 . C A 195.543 PASS DP=14;VDB=0.225193;SGB=-0.676189;RPB=0.545455;MQB=0;MQSB=0.953497;BQB=0.636364;MQ0F=0;AF1=1;AC1=2;DP4=0,2,4,7;MQ=46;FQ=-28.9912;PV4=1,0.205708,1,0.263507 GT:PL 1/1:225,2,0
Scaffold_1 392004 . G A 40.9724 PASS DP=3;VDB=0.0941126;SGB=-0.511536;MQ0F=0;AF1=1;AC1=2;DP4=0,0,0,3;MQ=29;FQ=-35.9869 GT:PL 1/1:73,9,0
Scaffold_1 393066 . C T 11.8355 PASS DP=6;VDB=0.309755;SGB=-0.511536;RPB=0.28717;MQB=0.28717;MQSB=0.28717;BQB=0.861511;MQ0F=0.166667;AF1=1;AC1=2;DP4=0,3,3,0;MQ=16;FQ=-28.9916;PV4=0.1,0.264976,1,0.18695 GT:PL 1/1:41,2,0
Scaffold_1 393084 . C T 11.8355 PASS DP=6;VDB=0.309755;SGB=-0.511536;RPB=0.28717;MQB=0.28717;MQSB=0.28717;BQB=0.861511;MQ0F=0.166667;AF1=1;AC1=2;DP4=0,3,3,0;MQ=16;FQ=-28.9916;PV4=0.1,0.264976,1,1 GT:PL 1/1:41,2,0
Scaffold_1 393136 . C T 68.7889 PASS DP=7;VDB=0.99432;SGB=-0.590765;RPB=1;MQB=1;MQSB=1;BQB=1;MQ0F=0.142857;AF1=1;AC1=2;DP4=0,1,5,0;MQ=35;FQ=-36.9867;PV4=0.166667,0.352,1,0.187204 GT:PL 1/1:101,10,0
Scaffold_1 393151 . C T 79.193 PASS DP=7;VDB=0.8442;SGB=-0.556411;RPB=1;MQB=1;MQSB=1;BQB=1;MQ0F=0.142857;AF1=1;AC1=2;DP4=0,1,4,0;MQ=37;FQ=-34.9872;PV4=0.2,0.342519,1,1 GT:PL 1/1:111,8,0
Scaffold_1 393183 . C T 119.133 PASS DP=8;VDB=0.0435222;SGB=-0.616816;MQ0F=0;AF1=1;AC1=2;DP4=0,0,6,0;MQ=43;FQ=-44.9861 GT:PL 1/1:152,18,0
Scaffold_1 393198 . T G 117.133 PASS DP=8;VDB=0.0389458;SGB=-0.616816;MQ0F=0;AF1=1;AC1=2;DP4=0,0,6,0;MQ=43;FQ=-44.9861 GT:PL 1/1:150,18,0
Scaffold_1 393246 . T A 151.033 PASS DP=8;VDB=0.0485975;SGB=-0.651104;MQSB=1;MQ0F=0;AF1=1;AC1=2;DP4=0,0,7,1;MQ=41;FQ=-50.986 GT:PL 1/1:184,24,0
Scaffold_1 393258 . G A 130.133 PASS DP=8;VDB=0.114818;SGB=-0.616816;MQSB=1;MQ0F=0;AF1=1;AC1=2;DP4=0,0,5,1;MQ=38;FQ=-44.9861 GT:PL 1/1:163,18,0
Scaffold_1 393263 . C T 130.133 PASS DP=8;VDB=0.147842;SGB=-0.616816;MQSB=1;MQ0F=0;AF1=1;AC1=2;DP4=0,0,5,1;MQ=38;FQ=-44.9861 GT:PL 1/1:163,18,0
Scaffold_1 394067 . G C 31.7673 PASS DP=2;VDB=0.64;SGB=-0.453602;MQ0F=0;AF1=1;AC1=2;DP4=0,0,2,0;MQ=59;FQ=-32.988 GT:PL 1/1:63,6,0
Scaffold_1 394073 . C T 43.7647 PASS DP=2;VDB=0.64;SGB=-0.453602;MQ0F=0;AF1=1;AC1=2;DP4=0,0,2,0;MQ=59;FQ=-32.988 GT:PL 1/1:75,6,0
Scaffold_1 394145 . C T 79.9725 PASS DP=4;VDB=0.62656;SGB=-0.511536;MQSB=1;MQ0F=0;AF1=1;AC1=2;DP4=0,0,2,1;MQ=55;FQ=-35.9869 GT:PL 1/1:112,9,0
Scaffold_1 394151 . T C 63.9723 PASS DP=4;VDB=0.62656;SGB=-0.511536;MQSB=1;MQ0F=0;AF1=1;AC1=2;DP4=0,0,2,1;MQ=55;FQ=-35.9869 GT:PL 1/1:96,9,0
Scaffold_1 394176 . T A 98.9728 PASS DP=4;VDB=0.480199;SGB=-0.511536;MQSB=1;MQ0F=0;AF1=1;AC1=2;DP4=0,0,1,2;MQ=49;FQ=-35.9869 GT:PL 1/1:131,9,0
Scaffold_1 394179 . G T 62.7648 PASS DP=4;VDB=0.36;SGB=-0.453602;MQSB=1;MQ0F=0;AF1=1;AC1=2;DP4=0,0,1,1;MQ=53;FQ=-32.988 GT:PL 1/1:94,6,0
Scaffold_1 394191 . A C 94.9727 PASS DP=4;VDB=0.480199;SGB=-0.511536;MQSB=1;MQ0F=0;AF1=1;AC1=2;DP4=0,0,1,2;MQ=49;FQ=-35.9869 GT:PL 1/1:127,9,0
Scaffold_1 394222 . T C 59.9723 PASS DP=4;VDB=0.883313;SGB=-0.511536;MQ0F=0;AF1=1;AC1=2;DP4=0,0,0,3;MQ=42;FQ=-35.9869 GT:PL 1/1:92,9,0
Scaffold_1 394240 . T C 30.768 PASS DP=3;VDB=0.44;SGB=-0.453602;MQ0F=0;AF1=1;AC1=2;DP4=0,0,0,2;MQ=40;FQ=-32.988 GT:PL 1/1:62,6,0
Scaffold_1 394250 . C T 51.9722 PASS DP=3;VDB=0.440791;SGB=-0.511536;MQ0F=0;AF1=1;AC1=2;DP4=0,0,0,3;MQ=40;FQ=-35.9869 GT:PL 1/1:84,9,0
Scaffold_1 394252 . A C 56.9722 PASS DP=3;VDB=0.431015;SGB=-0.511536;MQ0F=0;AF1=1;AC1=2;DP4=0,0,0,3;MQ=40;FQ=-35.9869 GT:PL 1/1:89,9,0
Scaffold_1 394348 . C T 30.768 PASS DP=2;VDB=0.92;SGB=-0.453602;MQ0F=0;AF1=1;AC1=2;DP4=0,0,0,2;MQ=43;FQ=-32.988 GT:PL 1/1:62,6,0
Scaffold_1 394353 . C T 26.7735 PASS DP=2;VDB=0.92;SGB=-0.453602;MQ0F=0;AF1=1;AC1=2;DP4=0,0,0,2;MQ=43;FQ=-32.988 GT:PL 1/1:58,6,0
Scaffold_1 394594 . G A 27.0155 PASS DP=6;VDB=0.14;SGB=-0.453602;RPB=0.625;MQB=0.875;BQB=0.75;MQ0F=0;AF1=0.499999;AC1=1;DP4=4,0,2,0;MQ=40;FQ=30.0139;PV4=1,1,1,1 GT:PL 0/1:57,0,86
Scaffold_1 394689 . C T 34.0087 PASS DP=14;VDB=0.810473;SGB=-0.590765;RPB=0.99778;MQB=0.965069;BQB=0.308647;MQ0F=0;AF1=0.5;AC1=1;DP4=9,0,5,0;MQ=34;FQ=37.0138;PV4=1,1,0.283134,0.430209 GT:PL 0/1:64,0,97
Scaffold_1 394712 . C T 47.0072 PASS DP=13;VDB=0.0525422;SGB=-0.590765;RPB=0.95494;MQB=0.95494;BQB=0.40926;MQ0F=0;AF1=0.5;AC1=1;DP4=7,0,5,0;MQ=31;FQ=50.0044;PV4=1,0.0477867,1,1 GT:PL 0/1:77,0,103
Scaffold_1 394715 . G A 71.0074 PASS DP=11;VDB=0.0483588;SGB=-0.636426;RPB=0.643095;MQB=0.924449;BQB=0.924449;MQ0F=0;AF1=0.5;AC1=1;DP4=4,0,7,0;MQ=30;FQ=40.0139;PV4=1,0.329022,0.312029,1 GT:PL 0/1:101,0,67
Scaffold_1 394835 . C T 20.0499 PASS DP=7;VDB=0.06;SGB=-0.453602;RPB=0.5;MQB=0.375;MQSB=1;BQB=0.875;MQ0F=0;AF1=0.499997;AC1=1;DP4=1,3,0,2;MQ=52;FQ=23.0366;PV4=1,1,0.131632,1 GT:PL 0/1:50,0,106
Scaffold_1 394875 . G A 13.2188 PASS DP=11;VDB=0.1;SGB=-0.453602;RPB=0;MQB=0.875;BQB=0.8125;MQ0F=0;AF1=0.499987;AC1=1;DP4=0,8,0,2;MQ=44;FQ=16.1222;PV4=1,1,1,1 GT:PL 0/1:43,0,120
Scaffold_1 394876 . A G 61.0073 PASS DP=12;VDB=0.149847;SGB=-0.616816;RPB=0.8618;MQB=0.8618;MQSB=1;BQB=0.950952;MQ0F=0;AF1=0.5;AC1=1;DP4=1,4,0,6;MQ=43;FQ=63.9937;PV4=0.454545,1,0.439773,1 GT:PL 0/1:91,0,114
Scaffold_1 394889 . C T 12.272 PASS DP=13;VDB=0.1;SGB=-0.453602;RPB=0;MQB=0.777778;MQSB=1;BQB=0.555556;MQ0F=0;AF1=0.499984;AC1=1;DP4=1,8,0,2;MQ=42;FQ=15.1496;PV4=1,1,1,0.0714125 GT:PL 0/1:42,0,154
Scaffold_1 394953 . C G 36.0081 PASS DP=11;VDB=0.148314;SGB=-0.590765;RPB=0.0891517;MQB=0.742931;MQSB=1;BQB=0.950952;MQ0F=0;AF1=0.5;AC1=1;DP4=1,5,0,5;MQ=36;FQ=39.0146;PV4=1,1,1,0.303718 GT:PL 0/1:66,0,102
Scaffold_1 394978 . G A 18.0749 PASS DP=11;VDB=0.917785;SGB=-0.511536;RPB=0.472367;MQB=0.829029;MQSB=1;BQB=0.360295;MQ0F=0;AF1=0.499996;AC1=1;DP4=0,8,1,2;MQ=28;FQ=21.0491;PV4=0.272727,0.0257682,1,0.262309 GT:PL 0/1:48,0,100
Scaffold_1 396892 . G A 38.7651 PASS DP=2;VDB=0.02;SGB=-0.453602;MQ0F=0;AF1=1;AC1=2;DP4=0,0,2,0;MQ=40;FQ=-32.988 GT:PL 1/1:70,6,0
Scaffold_1 396921 . C T 60.0073 PASS DP=11;VDB=0.112489;SGB=-0.590765;RPB=0.683497;MQB=0.208021;MQSB=0.208021;BQB=0.891517;MQ0F=0.181818;AF1=0.500002;AC1=1;DP4=2,4,4,1;MQ=27;FQ=24.0316;PV4=0.242424,1,1,1 GT:PL 0/1:90,0,51
Scaffold_1 396931 . C G 47.0072 PASS DP=11;VDB=0.131345;SGB=-0.556411;RPB=0.895781;MQB=0.335918;MQSB=0.333321;BQB=0.503877;MQ0F=0.181818;AF1=0.500001;AC1=1;DP4=2,4,3,1;MQ=25;FQ=27.0019;PV4=0.52381,1,1,0.414479 GT:PL 0/1:77,0,54
Scaffold_1 396947 . C T 58.0073 PASS DP=11;VDB=0.106137;SGB=-0.590765;RPB=0.683497;MQB=0.208021;MQSB=0.208021;BQB=0.742931;MQ0F=0.181818;AF1=0.500002;AC1=1;DP4=2,4,4,1;MQ=27;FQ=24.0313;PV4=0.242424,1,1,1 GT:PL 0/1:88,0,51
Scaffold_1 396996 . G A 26.0178 PASS DP=18;VDB=0.292572;SGB=-0.590765;RPB=0.164989;MQB=0.370881;MQSB=0.0667034;BQB=0.581657;MQ0F=0.222222;AF1=0.500007;AC1=1;DP4=1,9,4,1;MQ=21;FQ=17.7563;PV4=0.016983,0.18203,1,1 GT:PL 0/1:56,0,45
Scaffold_1 397042 . A T 37.0113 PASS DP=18;VDB=0.387746;SGB=-0.616816;RPB=0.64118;MQB=0.256376;MQSB=0.0330712;BQB=0.894839;MQ0F=0.277778;AF1=0.500396;AC1=1;DP4=0,9,4,2;MQ=20;FQ=3.54693;PV4=0.010989,0.199672,1,0.0886923 GT:PL 0/1:67,0,28
Scaffold_1 397059 . T A 36.0081 PASS DP=15;VDB=0.913383;SGB=-0.556411;RPB=0.926163;MQB=0.0851732;MQSB=0.146957;BQB=0.872525;MQ0F=0.266667;AF1=0.500001;AC1=1;DP4=1,10,3,1;MQ=22;FQ=25.814;PV4=0.032967,0.182716,1,0.116231 GT:PL 0/1:66,0,53
Scaffold_1 397075 . G A 13.2208 PASS DP=10;VDB=0.858134;SGB=-0.590765;RPB=0.89338;MQB=0.89338;MQSB=1;BQB=0.89338;MQ0F=0.3;AF1=0.500238;AC1=1;DP4=1,3,0,5;MQ=19;FQ=4.63369;PV4=0.444444,0.203542,1,0.203542 GT:PL 0/1:43,0,30
Scaffold_1 397225 . T C 85.2636 PASS DP=5;VDB=0.0139857;SGB=-0.590765;MQ0F=0;AF1=1;AC1=2;DP4=0,0,0,5;MQ=36;FQ=-41.9862 GT:PL 1/1:118,15,0
Scaffold_1 397228 . T A 35.0356 PASS DP=5;VDB=0.0481133;SGB=-0.511536;RPB=1;MQB=1;BQB=1;MQ0F=0;AF1=0.503167;AC1=1;DP4=0,1,0,3;MQ=34;FQ=-8.62649;PV4=1,0.333333,1,0.333333 GT:PL 0/1:65,0,19
Scaffold_1 397229 . C T 76.2635 PASS DP=5;VDB=0.0131987;SGB=-0.590765;MQ0F=0;AF1=1;AC1=2;DP4=0,0,0,5;MQ=36;FQ=-41.9862 GT:PL 1/1:109,15,0
Scaffold_1 397246 . A G 52.0614 PASS DP=5;VDB=0.0190094;SGB=-0.556411;RPB=1;MQB=1;BQB=1;MQ0F=0;AF1=0.50636;AC1=1;DP4=0,1,0,4;MQ=36;FQ=-11.3185;PV4=1,1,1,0.22161 GT:PL 0/1:82,0,16
Scaffold_1 398985 . A T 12.2769 PASS DP=16;VDB=0.00030324;SGB=-0.676189;RPB=0.872525;MQB=0.735784;MQSB=0.989637;BQB=0.658617;MQ0F=0.5;AF1=1;AC1=2;DP4=3,1,9,2;MQ=13;FQ=-29.9904;PV4=1,1,1,1 GT:PL 1/1:42,3,0
Scaffold_1 400090 . T C 11.1139 PASS DP=3;VDB=0.18;SGB=-0.453602;MQ0F=0;AF1=1;AC1=2;DP4=0,0,2,0;MQ=23;FQ=-32.9882 GT:PL 1/1:42,6,0
Scaffold_1 400111 . T C 11.1139 PASS DP=2;VDB=0.14;SGB=-0.453602;MQ0F=0;AF1=1;AC1=2;DP4=0,0,2,0;MQ=23;FQ=-32.9882 GT:PL 1/1:42,6,0
Scaffold_1 400120 . A T 11.1139 PASS DP=2;VDB=0.14;SGB=-0.453602;MQ0F=0;AF1=1;AC1=2;DP4=0,0,2,0;MQ=23;FQ=-32.9882 GT:PL 1/1:42,6,0
Scaffold_1 400226 . G A 31.0104 PASS DP=7;VDB=0.137328;SGB=-0.511536;RPB=0.810265;MQB=0.810265;MQSB=0.810265;BQB=0.810265;MQ0F=0;AF1=0.5;AC1=1;DP4=2,2,2,1;MQ=29;FQ=31.0082;PV4=1,1,1,1 GT:PL 0/1:61,0,61
Scaffold_1 400319 . T C 12.2721 PASS DP=7;VDB=0.0330887;SGB=-0.511536;RPB=0.607698;MQB=0.810265;MQSB=1.01283;BQB=0.607698;MQ0F=0.142857;AF1=0.499992;AC1=1;DP4=3,1,1,2;MQ=28;FQ=13.4512;PV4=0.485714,1,1,1 GT:PL 0/1:42,0,45
Scaffold_1 403343 . G A 18.0817 PASS DP=10;VDB=0.58553;SGB=-0.616816;RPB=0.727822;MQB=0.895781;MQSB=0.952347;BQB=0.895781;MQ0F=0.4;AF1=0.500788;AC1=1;DP4=3,1,2,4;MQ=18;FQ=-4.12881;PV4=0.52381,1,1,1 GT:PL 0/1:48,0,25
Scaffold_1 403458 . A C 13.3335 PASS DP=10;VDB=0.42;SGB=-0.453602;RPB=0.166667;MQB=0;MQSB=1;BQB=0.416667;MQ0F=0.5;AF1=1;AC1=2;DP4=0,6,1,1;MQ=17;FQ=-27.9929;PV4=0.25,1,1,1 GT:PL 1/1:42,1,0
Scaffold_1 403479 . A C 48.1253 PASS DP=7;VDB=0.0568882;SGB=-0.556411;RPB=0;MQB=0;MQSB=1;BQB=0.375;MQ0F=0.285714;AF1=1;AC1=2;DP4=0,2,1,3;MQ=22;FQ=-31.9885;PV4=1,1,1,1 GT:PL 1/1:79,5,0
Scaffold_1 403498 . A G 49.1927 PASS DP=7;VDB=0.0568882;SGB=-0.556411;RPB=1;MQB=1;MQSB=1;BQB=1;MQ0F=0.285714;AF1=1;AC1=2;DP4=0,1,1,3;MQ=24;FQ=-34.9872;PV4=1,1,1,1 GT:PL 1/1:81,8,0
Scaffold_1 403547 . C T 36.0149 PASS DP=10;VDB=0.0533436;SGB=-0.556411;RPB=0.0812164;MQB=0.243649;MQSB=0.649731;BQB=0.649731;MQ0F=0.1;AF1=0.500792;AC1=1;DP4=3,2,1,3;MQ=20;FQ=-4.11572;PV4=0.52381,1,1,1 GT:PL 0/1:66,0,25
Scaffold_1 405477 . G A 12.2746 PASS DP=5;VDB=0.440791;SGB=-0.511536;RPB=0.666667;MQB=1;MQSB=0.333333;BQB=0.666667;MQ0F=0.2;AF1=0.500299;AC1=1;DP4=1,1,2,1;MQ=24;FQ=4.00431;PV4=1,0.247513,0.49257,1 GT:PL 0/1:42,0,29
Scaffold_1 406566 . A C 25.9828 PASS DP=3;VDB=0.401962;SGB=-0.511536;MQ0F=0.333333;AF1=1;AC1=2;DP4=0,0,3,0;MQ=29;FQ=-35.9869 GT:PL 1/1:58,9,0
Scaffold_1 406615 . C T 29.0129 PASS DP=6;VDB=0.02;SGB=-0.453602;RPB=0.666667;MQB=0;BQB=1;MQ0F=0.333333;AF1=0.500062;AC1=1;DP4=3,0,2,0;MQ=30;FQ=9.50881;PV4=1,1,1,1 GT:PL 0/1:59,0,36
Scaffold_1 406626 . G A 10.4205 PASS DP=5;VDB=0.02;SGB=-0.453602;RPB=0.666667;MQB=0;BQB=0;MQ0F=0.2;AF1=0.500038;AC1=1;DP4=3,0,2,0;MQ=30;FQ=8.26127;PV4=1,0.00428214,1,1 GT:PL 0/1:40,0,36
Scaffold_1 406645 . T C 71.2635 PASS DP=5;VDB=0.0672958;SGB=-0.590765;MQ0F=0.2;AF1=1;AC1=2;DP4=0,0,5,0;MQ=30;FQ=-41.9862 GT:PL 1/1:104,15,0
Scaffold_1 406747 . A G 27.0155 PASS DP=12;VDB=0.0846253;SGB=-0.556411;RPB=0.361741;MQB=0.763675;MQSB=0.442128;BQB=0.924449;MQ0F=0.25;AF1=0.499999;AC1=1;DP4=4,3,3,1;MQ=28;FQ=30.0172;PV4=1,0.263947,1,0.397572 GT:PL 0/1:57,0,90
Scaffold_1 406780 . G A 35.0083 PASS DP=11;VDB=0.0896691;SGB=-0.556411;RPB=0.503877;MQB=0.783809;MQSB=0.0476173;BQB=0.895781;MQ0F=0.181818;AF1=0.5;AC1=1;DP4=2,4,3,1;MQ=29;FQ=37.0427;PV4=0.52381,0.441514,1,1 GT:PL 0/1:65,0,71
Scaffold_1 406800 . T C 33.0091 PASS DP=13;VDB=0.0846253;SGB=-0.556411;RPB=0.697274;MQB=0.968069;MQSB=0.0584657;BQB=0.98568;MQ0F=0.153846;AF1=0.5;AC1=1;DP4=4,4,3,1;MQ=29;FQ=36.014;PV4=0.575758,1,1,1 GT:PL 0/1:63,0,96
Scaffold_1 406816 . G A 25.0205 PASS DP=14;VDB=0.0896691;SGB=-0.556411;RPB=0.94394;MQB=0.913799;MQSB=0.40926;BQB=0.697274;MQ0F=0.142857;AF1=0.499999;AC1=1;DP4=2,6,3,1;MQ=31;FQ=28.0218;PV4=0.222222,0.082733,1,1 GT:PL 0/1:55,0,111
Scaffold_1 406831 . A G 55.0072 PASS DP=13;VDB=0.797968;SGB=-0.590765;RPB=0.666643;MQB=0.904729;MQSB=0.279932;BQB=0.761877;MQ0F=0.153846;AF1=0.5;AC1=1;DP4=3,2,1,4;MQ=34;FQ=49.3764;PV4=0.52381,1,1,1 GT:PL 0/1:85,0,77
Scaffold_1 407121 . T A 86.0076 PASS DP=11;VDB=0.160409;SGB=-0.556411;RPB=0.372138;MQB=0.868321;MQSB=0;BQB=0.868321;MQ0F=0;AF1=0.5;AC1=1;DP4=1,3,1,3;MQ=43;FQ=84.8913;PV4=1,1,1,0.238229 GT:PL 0/1:116,0,114
Scaffold_1 407145 . T A 77.0075 PASS DP=9;VDB=0.598008;SGB=-0.556411;RPB=0.974597;MQB=0.730948;MQSB=0;BQB=0.89338;MQ0F=0;AF1=0.5;AC1=1;DP4=1,4,1,3;MQ=40;FQ=78.2513;PV4=1,0.466265,1,0.315116 GT:PL 0/1:107,0,110
Scaffold_1 407188 . T A 22.0341 PASS DP=5;VDB=0.76;SGB=-0.453602;RPB=0.666667;MQB=0.666667;MQSB=1;BQB=0.5;MQ0F=0;AF1=0.499998;AC1=1;DP4=1,2,0,2;MQ=44;FQ=25.0286;PV4=1,0.136114,0.280574,0.442598 GT:PL 0/1:52,0,100
Scaffold_1 407194 . C T 58.9723 PASS DP=3;VDB=0.172729;SGB=-0.511536;MQ0F=0;AF1=1;AC1=2;DP4=0,0,0,3;MQ=39;FQ=-35.9869 GT:PL 1/1:91,9,0
Scaffold_1 407628 . C T 24.5554 PASS DP=4;VDB=0.549396;SGB=-0.511536;RPB=1;MQB=1;BQB=1;MQ0F=0;AF1=1;AC1=2;DP4=1,0,3,0;MQ=22;FQ=-30.9892;PV4=1,1,1,0.211325 GT:PL 1/1:55,4,0
Scaffold_1 407652 . G A 24.5554 PASS DP=4;VDB=0.549396;SGB=-0.511536;RPB=1;MQB=1;BQB=1;MQ0F=0;AF1=1;AC1=2;DP4=1,0,3,0;MQ=22;FQ=-30.9892;PV4=1,1,1,1 GT:PL 1/1:55,4,0
Scaffold_1 407653 . G A 24.5554 PASS DP=4;VDB=0.549396;SGB=-0.511536;RPB=1;MQB=1;BQB=1;MQ0F=0;AF1=1;AC1=2;DP4=1,0,3,0;MQ=22;FQ=-30.9892;PV4=1,1,1,1 GT:PL 1/1:55,4,0
Scaffold_1 407849 . C T 59.0073 PASS DP=6;VDB=0.440791;SGB=-0.511536;RPB=0.861511;MQB=0.574341;MQSB=0;BQB=0.861511;MQ0F=0;AF1=0.5;AC1=1;DP4=2,1,2,1;MQ=43;FQ=43.9471;PV4=1,0.319198,1,1 GT:PL 0/1:89,0,71
Scaffold_1 407995 . C T 38.0077 PASS DP=9;VDB=0.0320192;SGB=-0.556411;RPB=0.62023;MQB=0.124046;MQSB=1;BQB=0.868321;MQ0F=0;AF1=0.5;AC1=1;DP4=1,3,0,4;MQ=45;FQ=41.0155;PV4=1,0.268701,0.00777901,1 GT:PL 0/1:68,0,127
Scaffold_1 408003 . C G 36.0081 PASS DP=9;VDB=0.0277111;SGB=-0.556411;RPB=0.810265;MQB=0.202566;MQSB=1;BQB=0.607698;MQ0F=0;AF1=0.5;AC1=1;DP4=1,2,0,4;MQ=43;FQ=39.0156;PV4=0.428571,0.103976,0.0197971,1 GT:PL 0/1:66,0,115
Scaffold_1 408119 . G T 33.0134 PASS DP=4;VDB=0.06;SGB=-0.453602;RPB=0;MQB=0;BQB=0;MQ0F=0;AF1=0.500499;AC1=1;DP4=0,2,0,2;MQ=32;FQ=3.01712;PV4=1,1,1,1 GT:PL 0/1:63,0,27
Scaffold_1 408260 . C T 55.0754 PASS DP=4;VDB=0.0785113;SGB=-0.511536;RPB=1;MQB=1;BQB=1;MQ0F=0;AF1=0.508032;AC1=1;DP4=1,0,3,0;MQ=47;FQ=-12.2521;PV4=1,1,1,1 GT:PL 0/1:85,0,15
Scaffold_1 408264 . G A 33.0434 PASS DP=4;VDB=0.22;SGB=-0.453602;RPB=1;MQB=1;BQB=1;MQ0F=0;AF1=0.503994;AC1=1;DP4=1,0,2,0;MQ=44;FQ=-9.50221;PV4=1,0.333333,1,1 GT:PL 0/1:63,0,18
Scaffold_1 408361 . G A 27.0161 PASS DP=6;VDB=0.22;SGB=-0.453602;RPB=0;MQB=0;BQB=0.833333;MQ0F=0;AF1=0.500062;AC1=1;DP4=3,0,2,0;MQ=36;FQ=9.49758;PV4=1,1,1,0.149419 GT:PL 0/1:57,0,36
Scaffold_1 408621 . C G 79.9725 PASS DP=3;VDB=0.17915;SGB=-0.511536;MQSB=1;MQ0F=0;AF1=1;AC1=2;DP4=0,0,2,1;MQ=60;FQ=-35.9869 GT:PL 1/1:112,9,0
Scaffold_1 409121 . T C 158.067 PASS DP=7;VDB=0.422204;SGB=-0.636426;MQSB=1;MQ0F=0;AF1=1;AC1=2;DP4=0,0,6,1;MQ=52;FQ=-47.986 GT:PL 1/1:191,21,0
Scaffold_1 441746 . G C 222.008 PASS DP=12;VDB=0.778152;SGB=-0.670168;MQSB=0.333321;MQ0F=0;AF1=1;AC1=2;DP4=0,0,5,5;MQ=47;FQ=-56.9861 GT:PL 1/1:255,30,0
Scaffold_1 441761 . A C 222.003 PASS DP=11;VDB=0.776548;SGB=-0.676189;MQSB=0.208021;MQ0F=0;AF1=1;AC1=2;DP4=0,0,6,5;MQ=48;FQ=-59.9861 GT:PL 1/1:255,33,0
Scaffold_1 441803 . A G 211.008 PASS DP=10;VDB=0.109534;SGB=-0.670168;MQSB=0.75;MQ0F=0;AF1=1;AC1=2;DP4=0,0,2,8;MQ=41;FQ=-56.9861 GT:PL 1/1:244,30,0
Scaffold_1 441807 . T A 202.007 PASS DP=10;VDB=0.110348;SGB=-0.670168;MQSB=0.75;MQ0F=0;AF1=1;AC1=2;DP4=0,0,2,8;MQ=41;FQ=-56.9861 GT:PL 1/1:235,30,0
Scaffold_1 441813 . A C 212.008 PASS DP=11;VDB=0.10792;SGB=-0.670168;MQSB=0.75;MQ0F=0;AF1=1;AC1=2;DP4=0,0,2,8;MQ=41;FQ=-56.9861 GT:PL 1/1:245,30,0
Scaffold_1 441823 . C T 219.003 PASS DP=11;VDB=0.28694;SGB=-0.676189;MQSB=0.666667;MQ0F=0;AF1=1;AC1=2;DP4=0,0,2,9;MQ=43;FQ=-59.9861 GT:PL 1/1:252,33,0
Scaffold_1 441841 . A T 222.001 PASS DP=12;VDB=0.663641;SGB=-0.680642;MQSB=0.983051;MQ0F=0;AF1=1;AC1=2;DP4=0,0,3,9;MQ=45;FQ=-62.9862 GT:PL 1/1:255,36,0
Scaffold_1 445373 . A G 10.42 PASS DP=12;VDB=0.02;SGB=-0.453602;RPB=0.1;MQB=1;MQSB=0.95494;BQB=0.9;MQ0F=0;AF1=0.499975;AC1=1;DP4=5,5,0,2;MQ=60;FQ=13.2265;PV4=0.469697,1,1,0.05498 GT:PL 0/1:40,0,255
Scaffold_1 458157 . G A 19.061 PASS DP=9;VDB=0.02;SGB=-0.453602;RPB=0.571429;MQB=0.285714;MQSB=0.974597;BQB=0.714286;MQ0F=0;AF1=0.499997;AC1=1;DP4=4,3,0,2;MQ=57;FQ=22.0421;PV4=0.444444,1,0.259505,1 GT:PL 0/1:49,0,179
Scaffold_1 462144 . C A 46.0072 PASS DP=10;VDB=0.0221621;SGB=-0.511536;RPB=0.916482;MQB=0.916482;MQSB=0.857112;BQB=0.366593;MQ0F=0;AF1=0.5;AC1=1;DP4=2,5,3,0;MQ=58;FQ=49.0153;PV4=0.166667,1,1,1 GT:PL 0/1:76,0,153
Scaffold_1 468779 . A T 63.2634 PASS DP=6;VDB=0.00868673;SGB=-0.590765;MQSB=1;MQ0F=0;AF1=1;AC1=2;DP4=0,0,4,1;MQ=30;FQ=-41.9862 GT:PL 1/1:96,15,0
Scaffold_1 468783 . T C 63.2634 PASS DP=5;VDB=0.0104213;SGB=-0.590765;MQSB=1;MQ0F=0;AF1=1;AC1=2;DP4=0,0,4,1;MQ=30;FQ=-41.9862 GT:PL 1/1:96,15,0
Scaffold_1 479012 . C A 16.1143 PASS DP=11;VDB=0.1;SGB=-0.453602;RPB=0.75;MQB=1;MQSB=0.952347;BQB=0.5;MQ0F=0;AF1=0.499994;AC1=1;DP4=3,5,2,0;MQ=60;FQ=19.069;PV4=0.444444,1,1,1 GT:PL 0/1:46,0,212
Scaffold_1 515225 . G A 16.1143 PASS DP=6;VDB=0.84;SGB=-0.453602;RPB=0.75;MQB=1;MQSB=1;BQB=0.25;MQ0F=0;AF1=0.499994;AC1=1;DP4=2,2,0,2;MQ=60;FQ=19.069;PV4=0.466667,0.061715,1,0.0889039 GT:PL 0/1:46,0,126
Scaffold_1 518542 . C T 20.0499 PASS DP=16;VDB=0.0175817;SGB=-0.556411;RPB=0.180092;MQB=0.0211283;MQSB=0.245404;BQB=0.381255;MQ0F=0;AF1=0.499997;AC1=1;DP4=3,6,4,0;MQ=52;FQ=23.0366;PV4=0.0699301,0.151576,4.84516e-08,0.15633 GT:PL 0/1:50,0,255
Scaffold_1 518550 . A G 20.0499 PASS DP=16;VDB=0.0205346;SGB=-0.556411;RPB=0.180092;MQB=0.0211283;MQSB=0.245404;BQB=0.864302;MQ0F=0;AF1=0.499997;AC1=1;DP4=3,6,4,0;MQ=52;FQ=23.0366;PV4=0.0699301,1,4.84516e-08,0.362776 GT:PL 0/1:50,0,255
Scaffold_1 525608 . T C 16.1143 PASS DP=10;VDB=0.02;SGB=-0.453602;RPB=0;MQB=1;MQSB=1;BQB=0.75;MQ0F=0;AF1=0.499994;AC1=1;DP4=2,6,0,2;MQ=60;FQ=19.069;PV4=1,1,1,1 GT:PL 0/1:46,0,204
Scaffold_1 530912 . G C 16.1143 PASS DP=8;VDB=0.892765;SGB=-0.511536;RPB=0.750668;MQB=0.150134;MQSB=0.900802;BQB=0.900802;MQ0F=0.125;AF1=0.499994;AC1=1;DP4=3,2,2,1;MQ=50;FQ=19.069;PV4=1,1,0.00202617,0.0482836 GT:PL 0/1:46,0,156
Scaffold_1 531329 . G C 24.0241 PASS DP=10;VDB=0.345596;SGB=-0.511536;RPB=0.916482;MQB=0.0916482;MQSB=0.559863;BQB=0.641538;MQ0F=0;AF1=0.499999;AC1=1;DP4=3,4,1,2;MQ=51;FQ=27.0236;PV4=1,1,0.0018705,1 GT:PL 0/1:54,0,175
Scaffold_1 531363 . C G 15.1417 PASS DP=11;VDB=0.354794;SGB=-0.511536;RPB=0.641538;MQB=0.0916482;MQSB=0.559863;BQB=0.916482;MQ0F=0;AF1=0.499992;AC1=1;DP4=3,4,1,2;MQ=51;FQ=18.0829;PV4=1,1,0.0018705,1 GT:PL 0/1:45,0,180
Scaffold_1 542480 . G T 87.2727 PASS DP=23;VDB=0.0281189;SGB=-0.651104;RPB=0.276292;MQB=0.00992813;MQSB=0.0242313;BQB=0.550861;MQ0F=0.521739;AF1=0.533586;AC1=1;DP4=13,1,3,5;MQ=20;FQ=-18.0541;PV4=0.0108828,1,1,1 GT:PL 0/1:117,0,9
Scaffold_1 542503 . C T 73.0347 PASS DP=27;VDB=0.0327841;SGB=-0.636426;RPB=0.218985;MQB=0.00093604;MQSB=0.0215547;BQB=0.895309;MQ0F=0.444444;AF1=0.503167;AC1=1;DP4=19,1,2,5;MQ=19;FQ=-8.62639;PV4=0.00144252,1,1,1 GT:PL 0/1:103,0,19
Scaffold_1 544525 . G C 41.0074 PASS DP=43;VDB=0.241547;SGB=-0.636426;RPB=0.531352;MQB=0.0582042;MQSB=0.0935647;BQB=0.773112;MQ0F=0.27907;AF1=0.5;AC1=1;DP4=23,7,6,1;MQ=24;FQ=44.0154;PV4=1,0.137243,1,1 GT:PL 0/1:71,0,129
Scaffold_1 544671 . C T 26.0177 PASS DP=30;VDB=0.365915;SGB=-0.662043;RPB=0.0253846;MQB=0.380243;MQSB=0.246186;BQB=0.828799;MQ0F=0.366667;AF1=0.499999;AC1=1;DP4=4,16,1,8;MQ=20;FQ=29.0202;PV4=1,0.0778895,1,0.302125 GT:PL 0/1:56,0,98
Scaffold_1 544795 . A G 48.0181 PASS DP=18;VDB=0.106137;SGB=-0.556411;RPB=0.77274;MQB=0.0233182;BQB=0.426445;MQ0F=0.555556;AF1=0.501256;AC1=1;DP4=0,11,0,4;MQ=22;FQ=-5.44501;PV4=1,1,1,1 GT:PL 0/1:78,0,23
Scaffold_1 544837 . T C 16.8548 PASS DP=11;VDB=0.1;SGB=-0.453602;RPB=0.4375;MQB=0;BQB=0.875;MQ0F=0.727273;AF1=1;AC1=2;DP4=0,8,0,2;MQ=18;FQ=-32.988;PV4=1,1,1,0.304314 GT:PL 1/1:48,6,0
Scaffold_1 544943 . A G 23.7859 PASS DP=8;VDB=0.0295886;SGB=-0.511536;RPB=1.01283;MQB=0.607698;MQSB=0.810265;BQB=1.01283;MQ0F=0.375;AF1=1;AC1=2;DP4=2,2,2,1;MQ=22;FQ=-26.9944;PV4=1,1,1,1 GT:PL 0/1:52,0,0
Scaffold_1 545292 . C A 64.1148 PASS DP=13;VDB=0.252943;SGB=-0.636426;RPB=0.838008;MQB=0.194886;MQSB=0.0443614;BQB=0.935451;MQ0F=0.230769;AF1=0.512852;AC1=1;DP4=3,2,6,1;MQ=24;FQ=-14.1556;PV4=0.522727,0.430297,1,0.0930606 GT:PL 0/1:94,0,13
Scaffold_1 545315 . T A 42.4203 PASS DP=9;VDB=0.765925;SGB=-0.556411;RPB=0.810265;MQB=0.405132;MQSB=0;BQB=0.810265;MQ0F=0.333333;AF1=0.555409;AC1=1;DP4=2,1,3,1;MQ=24;FQ=-20.029;PV4=1,1,1,0.218294 GT:PL 0/1:72,0,7
Scaffold_1 545517 . A C 69.1765 PASS DP=13;VDB=0.0974253;SGB=-0.616816;RPB=0.194278;MQB=0.0102252;MQSB=0.0320494;BQB=0.470358;MQ0F=0.230769;AF1=0.520679;AC1=1;DP4=4,3,0,6;MQ=27;FQ=-16.0937;PV4=0.0699301,1,1,1 GT:PL 0/1:99,0,11
Scaffold_1 545559 . G A 36.0297 PASS DP=12;VDB=0.811811;SGB=-0.556411;RPB=0.643095;MQB=0.0401934;MQSB=0.208021;BQB=0.763675;MQ0F=0.25;AF1=0.502513;AC1=1;DP4=4,3,1,3;MQ=19;FQ=-7.77808;PV4=0.545455,1,1,0.0293083 GT:PL 0/1:66,0,20
Scaffold_1 545893 . C G 95.4558 PASS DP=7;VDB=0.507898;SGB=-0.590765;RPB=0;MQB=0;MQSB=0.810265;BQB=0.8;MQ0F=0.285714;AF1=1;AC1=2;DP4=1,1,3,2;MQ=28;FQ=-33.9875;PV4=1,1,1,1 GT:PL 1/1:127,7,0
Scaffold_1 545894 . T A 57.1254 PASS DP=7;VDB=0.303109;SGB=-0.556411;RPB=0;MQB=0;MQSB=0.861511;BQB=0.75;MQ0F=0.285714;AF1=1;AC1=2;DP4=1,1,2,2;MQ=26;FQ=-31.9885;PV4=1,1,1,1 GT:PL 1/1:88,5,0
Scaffold_1 545913 . G A 143.264 PASS DP=8;VDB=0.729686;SGB=-0.636426;RPB=1;MQB=1;MQSB=0.150134;BQB=1;MQ0F=0.125;AF1=1;AC1=2;DP4=0,1,5,2;MQ=33;FQ=-41.9862;PV4=0.375,0.294255,1,1 GT:PL 1/1:176,15,0
Scaffold_1 546100 . C G 207.009 PASS DP=20;VDB=0.878682;SGB=-0.670168;RPB=0.65377;MQB=0.0337682;MQSB=0.588086;BQB=0.555306;MQ0F=0.2;AF1=0.500004;AC1=1;DP4=5,1,5,5;MQ=43;FQ=21.0492;PV4=0.306943,0.0760296,1,0.272506 GT:PL 0/1:237,0,48
Scaffold_1 546151 . A C 173.009 PASS DP=18;VDB=0.108895;SGB=-0.662043;RPB=0.569783;MQB=0.0253846;MQSB=0.720273;BQB=0.745722;MQ0F=0.222222;AF1=0.500003;AC1=1;DP4=5,1,3,6;MQ=43;FQ=23.0366;PV4=0.118881,0.088306,1,1 GT:PL 0/1:203,0,50
Scaffold_1 546438 . C T 68.0074 PASS DP=30;VDB=0.230053;SGB=-0.662043;RPB=0.999698;MQB=0.998791;MQSB=0.978415;BQB=0.999698;MQ0F=0.133333;AF1=0.5;AC1=1;DP4=13,6,3,6;MQ=29;FQ=71.0155;PV4=0.113872,0.334045,0.395897,1 GT:PL 0/1:98,0,197
Scaffold_1 546554 . C G 24.0241 PASS DP=28;VDB=0.0550147;SGB=-0.590765;RPB=0.942774;MQB=0.838776;MQSB=0.258077;BQB=0.920991;MQ0F=0.107143;AF1=0.499999;AC1=1;DP4=9,13,0,5;MQ=32;FQ=27.0236;PV4=0.135786,1,1,1 GT:PL 0/1:54,0,236
Scaffold_1 546558 . T A 21.0411 PASS DP=27;VDB=0.0625499;SGB=-0.556411;RPB=0.874052;MQB=0.780407;MQSB=0.346276;BQB=0.997257;MQ0F=0.111111;AF1=0.499998;AC1=1;DP4=8,13,0,4;MQ=34;FQ=24.0321;PV4=0.268933,1,1,1 GT:PL 0/1:51,0,246
Scaffold_1 546562 . C A 23.0285 PASS DP=26;VDB=0.0525422;SGB=-0.590765;RPB=0.594978;MQB=0.96375;MQSB=0.240019;BQB=0.990812;MQ0F=0.115385;AF1=0.499999;AC1=1;DP4=8,12,0,5;MQ=34;FQ=26.0258;PV4=0.139921,0.471372,1,1 GT:PL 0/1:53,0,239
Scaffold_1 546789 . G T 125.008 PASS DP=18;VDB=0.0738748;SGB=-0.662043;RPB=0.981652;MQB=0.981652;MQSB=0.978023;BQB=0.687289;MQ0F=0.0555556;AF1=0.5;AC1=1;DP4=1,7,4,5;MQ=31;FQ=106.982;PV4=0.294118,1,0.320747,0.0880083 GT:PL 0/1:155,0,134
Scaffold_1 546803 . G A 47.0072 PASS DP=17;VDB=0.01126;SGB=-0.556411;RPB=0.851925;MQB=0.730444;MQSB=0.978023;BQB=0.762744;MQ0F=0.0588235;AF1=0.5;AC1=1;DP4=4,9,1,3;MQ=31;FQ=50.0153;PV4=1,0.0347154,1,1 GT:PL 0/1:77,0,192
Scaffold_1 546973 . C T 147.008 PASS DP=15;VDB=0.0602416;SGB=-0.636426;RPB=0.274945;MQB=0.366593;MQSB=0.783809;BQB=0.916482;MQ0F=0.0666667;AF1=0.500002;AC1=1;DP4=1,2,3,4;MQ=39;FQ=25.0286;PV4=1,0.161562,1,1 GT:PL 0/1:177,0,52
Scaffold_1 559015 . T C 22.0341 PASS DP=7;VDB=0.18;SGB=-0.453602;RPB=0.8;MQB=1;MQSB=1;BQB=0.7;MQ0F=0;AF1=0.499998;AC1=1;DP4=1,4,0,2;MQ=60;FQ=25.0286;PV4=1,0.256655,1,1 GT:PL 0/1:52,0,146
Scaffold_1 560226 . C A 16.1143 PASS DP=9;VDB=0.02;SGB=-0.453602;RPB=0;MQB=1;MQSB=0.924584;BQB=0.642857;MQ0F=0;AF1=0.499994;AC1=1;DP4=4,3,2,0;MQ=60;FQ=19.069;PV4=0.5,0.172699,1,0.0360148 GT:PL 0/1:46,0,202
Scaffold_1 568119 . A G 45.0072 PASS DP=13;VDB=0.190234;SGB=-0.651104;RPB=0.594978;MQB=0.444281;MQSB=0.372712;BQB=0.493254;MQ0F=0.538462;AF1=0.5;AC1=1;DP4=3,1,3,5;MQ=28;FQ=42.56;PV4=0.545455,1,0.126578,1 GT:PL 0/1:75,0,71
Scaffold_1 573993 . A C 27.0155 PASS DP=8;VDB=0.92;SGB=-0.453602;RPB=0.6;MQB=0;MQSB=0.810265;BQB=0.9;MQ0F=0;AF1=0.499999;AC1=1;DP4=2,3,1,1;MQ=55;FQ=30.0194;PV4=1,1,0.000143094,0.200939 GT:PL 0/1:57,0,136
Scaffold_1 574009 . G C 19.061 PASS DP=8;VDB=0.5;SGB=-0.453602;RPB=0.666667;MQB=0;MQSB=0.666667;BQB=0.833333;MQ0F=0;AF1=0.499997;AC1=1;DP4=2,4,0,2;MQ=56;FQ=22.0421;PV4=1,1,2.77315e-05,1 GT:PL 0/1:49,0,156
Scaffold_1 574061 . C A 22.0341 PASS DP=7;VDB=0.56;SGB=-0.453602;RPB=0.8;MQB=0;MQSB=1;BQB=1;MQ0F=0;AF1=0.499998;AC1=1;DP4=1,4,0,2;MQ=55;FQ=25.0286;PV4=1,1,0.000143094,1 GT:PL 0/1:52,0,149
Scaffold_1 574063 . C A 22.0341 PASS DP=7;VDB=0.56;SGB=-0.453602;RPB=0.8;MQB=0;MQSB=1;BQB=0.6;MQ0F=0;AF1=0.499998;AC1=1;DP4=1,4,0,2;MQ=55;FQ=25.0286;PV4=1,1,0.000143094,1 GT:PL 0/1:52,0,142
Scaffold_1 574075 . A G 22.0341 PASS DP=7;VDB=0.56;SGB=-0.453602;RPB=0.8;MQB=0;MQSB=1;BQB=0.8;MQ0F=0;AF1=0.499998;AC1=1;DP4=1,4,0,2;MQ=55;FQ=25.0286;PV4=1,1,0.000143094,0.406731 GT:PL 0/1:52,0,146
Scaffold_1 576314 . G A 13.943 PASS DP=2;VDB=0.86;SGB=-0.453602;MQ0F=0;AF1=1;AC1=2;DP4=0,0,0,2;MQ=29;FQ=-32.9881 GT:PL 1/1:45,6,0
Scaffold_1 576320 . C T 13.943 PASS DP=2;VDB=0.84;SGB=-0.453602;MQ0F=0;AF1=1;AC1=2;DP4=0,0,0,2;MQ=29;FQ=-32.9881 GT:PL 1/1:45,6,0
Scaffold_1 576564 . C A 38.7651 PASS DP=2;VDB=0.26;SGB=-0.453602;MQ0F=0;AF1=1;AC1=2;DP4=0,0,2,0;MQ=40;FQ=-32.988 GT:PL 1/1:70,6,0
Scaffold_1 576602 . T C 41.7648 PASS DP=2;VDB=0.26;SGB=-0.453602;MQ0F=0;AF1=1;AC1=2;DP4=0,0,2,0;MQ=40;FQ=-32.988 GT:PL 1/1:73,6,0
Scaffold_1 576953 . T C 67.5132 PASS DP=4;VDB=0.987865;SGB=-0.556411;MQSB=1;MQ0F=0;AF1=1;AC1=2;DP4=0,0,1,3;MQ=36;FQ=-38.9864 GT:PL 1/1:100,12,0
Scaffold_1 577307 . C T 29.769 PASS DP=2;VDB=0.28;SGB=-0.453602;MQSB=1;MQ0F=0;AF1=1;AC1=2;DP4=0,0,1,1;MQ=45;FQ=-32.988 GT:PL 1/1:61,6,0
Scaffold_1 577638 . T C 59.5131 PASS DP=4;VDB=0.0707707;SGB=-0.556411;MQSB=1;MQ0F=0.25;AF1=1;AC1=2;DP4=0,0,3,1;MQ=32;FQ=-38.9864 GT:PL 1/1:92,12,0
Scaffold_1 577639 . C G 44.5131 PASS DP=4;VDB=0.0751808;SGB=-0.556411;MQSB=1;MQ0F=0.25;AF1=1;AC1=2;DP4=0,0,3,1;MQ=32;FQ=-38.9864 GT:PL 1/1:77,12,0
Scaffold_1 577697 . G A 35.9731 PASS DP=4;VDB=0.0506481;SGB=-0.511536;MQSB=1;MQ0F=0.25;AF1=1;AC1=2;DP4=0,0,2,1;MQ=29;FQ=-35.9869 GT:PL 1/1:68,9,0
Scaffold_1 577699 . A T 12.0443 PASS DP=4;VDB=0.1;SGB=-0.453602;MQSB=1;MQ0F=0.25;AF1=1;AC1=2;DP4=0,0,1,1;MQ=28;FQ=-32.9882 GT:PL 1/1:43,6,0
Scaffold_1 577770 . A G 10.2001 PASS DP=2;VDB=0.7;SGB=-0.453602;MQ0F=0.5;AF1=1;AC1=2;DP4=0,0,2,0;MQ=34;FQ=-32.9883 GT:PL 1/1:41,6,0
Scaffold_1 577993 . C T 62.9723 PASS DP=3;VDB=0.172729;SGB=-0.511536;MQSB=1;MQ0F=0;AF1=1;AC1=2;DP4=0,0,2,1;MQ=52;FQ=-35.9869 GT:PL 1/1:95,9,0
Scaffold_1 578046 . C T 18.0405 PASS DP=3;VDB=0.82085;SGB=-0.511536;MQSB=1;MQ0F=0.333333;AF1=1;AC1=2;DP4=0,0,1,2;MQ=44;FQ=-35.9869 GT:PL 1/1:50,9,0
Scaffold_1 578156 . G A 25.7758 PASS DP=3;VDB=0.56;SGB=-0.453602;MQ0F=0;AF1=1;AC1=2;DP4=0,0,0,2;MQ=35;FQ=-32.988 GT:PL 1/1:57,6,0
Scaffold_1 578238 . A G 58.9723 PASS DP=3;VDB=0.185719;SGB=-0.511536;MQ0F=0;AF1=1;AC1=2;DP4=0,0,0,3;MQ=40;FQ=-35.9869 GT:PL 1/1:91,9,0
Scaffold_1 578279 . C A 65.9724 PASS DP=3;VDB=0.185719;SGB=-0.511536;MQ0F=0;AF1=1;AC1=2;DP4=0,0,0,3;MQ=40;FQ=-35.9869 GT:PL 1/1:98,9,0
Scaffold_1 578303 . A C 28.7701 PASS DP=2;VDB=0.36;SGB=-0.453602;MQ0F=0;AF1=1;AC1=2;DP4=0,0,0,2;MQ=40;FQ=-32.988 GT:PL 1/1:60,6,0
Scaffold_1 581571 . A G 19.5892 PASS DP=12;VDB=0.133161;SGB=-0.590765;RPB=0.0952347;MQB=0.0476173;MQSB=0.0559863;BQB=0.666643;MQ0F=0.5;AF1=1;AC1=2;DP4=1,4,5,0;MQ=14;FQ=-28.9913;PV4=0.047619,1,1,1 GT:PL 1/1:49,2,0
Scaffold_1 584985 . C T 13.2237 PASS DP=5;VDB=0.66;SGB=-0.453602;RPB=1;MQB=1;MQSB=1;BQB=1;MQ0F=0.6;AF1=1;AC1=2;DP4=1,0,1,1;MQ=26;FQ=-29.9903;PV4=1,1,1,1 GT:PL 1/1:43,3,0
Scaffold_1 585064 . G A 13.2237 PASS DP=4;VDB=0.28;SGB=-0.453602;RPB=1;MQB=1;MQSB=1;BQB=1;MQ0F=0.5;AF1=1;AC1=2;DP4=1,0,1,1;MQ=26;FQ=-29.9903;PV4=1,1,1,0.333333 GT:PL 1/1:43,3,0
Scaffold_1 585080 . G A 15.8779 PASS DP=3;VDB=0.32;SGB=-0.453602;MQ0F=0.333333;AF1=1;AC1=2;DP4=0,0,2,0;MQ=32;FQ=-32.988 GT:PL 1/1:47,6,0
Scaffold_1 585736 . C T 82.5134 PASS DP=4;VDB=0.172317;SGB=-0.556411;MQ0F=0;AF1=1;AC1=2;DP4=0,0,4,0;MQ=51;FQ=-38.9864 GT:PL 1/1:115,12,0
Scaffold_1 585737 . G A 89.5135 PASS DP=4;VDB=0.160409;SGB=-0.556411;MQ0F=0;AF1=1;AC1=2;DP4=0,0,4,0;MQ=51;FQ=-38.9864 GT:PL 1/1:122,12,0
Scaffold_1 606318 . G T 19.061 PASS DP=10;VDB=0.02;SGB=-0.453602;RPB=0.857143;MQB=1;MQSB=1;BQB=0.857143;MQ0F=0;AF1=0.499997;AC1=1;DP4=5,2,2,0;MQ=60;FQ=22.0421;PV4=1,0.313142,1,1 GT:PL 0/1:49,0,213
Scaffold_1 617830 . G T 21.0411 PASS DP=9;VDB=0.0279572;SGB=-0.511536;RPB=0.115573;MQB=0.577865;MQSB=0.243649;BQB=0.809011;MQ0F=0.333333;AF1=0.499998;AC1=1;DP4=3,3,1,2;MQ=46;FQ=24.0294;PV4=1,1,1,0.000256017 GT:PL 0/1:51,0,83
Scaffold_1 628952 . C A 10.42 PASS DP=12;VDB=0.02;SGB=-0.453602;RPB=0.9;MQB=1;MQSB=1;BQB=0.2;MQ0F=0;AF1=0.499975;AC1=1;DP4=7,3,2,0;MQ=60;FQ=13.2265;PV4=1,1,1,1 GT:PL 0/1:40,0,215
Scaffold_1 639304 . C T 16.1143 PASS DP=9;VDB=0.02;SGB=-0.453602;RPB=0.571429;MQB=0.857143;MQSB=0.89338;BQB=0.5;MQ0F=0;AF1=0.499994;AC1=1;DP4=3,4,2,0;MQ=58;FQ=19.069;PV4=0.444444,0.0261782,1,1 GT:PL 0/1:46,0,205
Scaffold_1 645092 . C A 19.061 PASS DP=9;VDB=0.02;SGB=-0.453602;RPB=0.333333;MQB=0.833333;MQSB=0.750668;BQB=0.833333;MQ0F=0;AF1=0.499997;AC1=1;DP4=3,3,2,0;MQ=58;FQ=22.0421;PV4=0.464286,1,1,1 GT:PL 0/1:49,0,159
Scaffold_1 664029 . G T 10.42 PASS DP=12;VDB=0.02;SGB=-0.453602;RPB=0.6;MQB=1;MQSB=0.982603;BQB=0.9;MQ0F=0;AF1=0.499975;AC1=1;DP4=4,6,2,0;MQ=60;FQ=13.2265;PV4=0.454545,1,1,1 GT:PL 0/1:40,0,249
Scaffold_1 665970 . T C 55.7888 PASS DP=6;VDB=0.133161;SGB=-0.590765;RPB=1;MQB=1;MQSB=1;BQB=1;MQ0F=0.166667;AF1=1;AC1=2;DP4=1,0,0,5;MQ=24;FQ=-36.9867;PV4=0.166667,0,1,1 GT:PL 1/1:88,10,0
Scaffold_1 666253 . G A 10.3882 PASS DP=13;VDB=0.74;SGB=-0.453602;RPB=0.636364;MQB=0;MQSB=0.381255;BQB=0.909091;MQ0F=0.846154;AF1=1;AC1=2;DP4=9,2,0,2;MQ=16;FQ=-35.9872;PV4=0.0769231,0.484466,1,0.00551536 GT:PL 1/1:42,9,0
Scaffold_1 679901 . C A 15.1417 PASS DP=9;VDB=0.02;SGB=-0.453602;RPB=0;MQB=1;MQSB=0.900802;BQB=0.833333;MQ0F=0;AF1=0.499992;AC1=1;DP4=3,3,2,0;MQ=60;FQ=18.0829;PV4=0.464286,1,1,0.191499 GT:PL 0/1:45,0,151
Scaffold_1 680498 . A C 13.2188 PASS DP=14;VDB=0.607612;SGB=-0.511536;RPB=0.896649;MQB=1;MQSB=1;BQB=0.896649;MQ0F=0;AF1=0.499987;AC1=1;DP4=6,5,3,0;MQ=60;FQ=16.1222;PV4=0.258242,0.299644,1,0.325585 GT:PL 0/1:43,0,230
Scaffold_1 680507 . C A 32.0097 PASS DP=15;VDB=0.62656;SGB=-0.511536;RPB=0.996435;MQB=1;MQSB=1;BQB=0.839457;MQ0F=0;AF1=0.5;AC1=1;DP4=5,5,3,0;MQ=60;FQ=35.0165;PV4=0.230769,0.423128,1,0.0217782 GT:PL 0/1:62,0,247
Scaffold_1 680513 . C G 24.0241 PASS DP=15;VDB=0.529687;SGB=-0.511536;RPB=0.985816;MQB=1;MQSB=1;BQB=0.944459;MQ0F=0;AF1=0.499999;AC1=1;DP4=6,4,3,0;MQ=60;FQ=27.0236;PV4=0.496504,0.165765,1,0.170793 GT:PL 0/1:54,0,244
Scaffold_1 680542 . G A 13.2188 PASS DP=13;VDB=0.06;SGB=-0.453602;RPB=0.222222;MQB=1;MQSB=1;BQB=0.777778;MQ0F=0;AF1=0.499987;AC1=1;DP4=6,3,2,0;MQ=60;FQ=16.1222;PV4=1,1,1,1 GT:PL 0/1:43,0,226
Scaffold_1 680573 . G A 138.008 PASS DP=19;VDB=0.00011609;SGB=-0.651104;RPB=0.00388362;MQB=1;MQSB=1;BQB=0.27833;MQ0F=0;AF1=0.5;AC1=1;DP4=5,5,6,2;MQ=60;FQ=141.016;PV4=0.366516,0.143099,1,1 GT:PL 0/1:168,0,247
Scaffold_1 680584 . G A 144.008 PASS DP=18;VDB=0.000849862;SGB=-0.651104;RPB=0.206192;MQB=1;MQSB=1;BQB=0.22291;MQ0F=0;AF1=0.5;AC1=1;DP4=4,6,6,2;MQ=60;FQ=147.017;PV4=0.187988,0.0421123,1,1 GT:PL 0/1:174,0,244
Scaffold_1 680591 . A C 140.008 PASS DP=18;VDB=0.00238612;SGB=-0.651104;RPB=0.203162;MQB=1;MQSB=1;BQB=0.894337;MQ0F=0;AF1=0.5;AC1=1;DP4=3,5,6,2;MQ=60;FQ=143.012;PV4=0.314685,0.12636,1,1 GT:PL 0/1:170,0,200
Scaffold_1 680616 . A G 180.009 PASS DP=18;VDB=0.155664;SGB=-0.662043;RPB=0.629416;MQB=1;MQSB=1;BQB=0.82234;MQ0F=0;AF1=0.5;AC1=1;DP4=4,4,6,3;MQ=60;FQ=158.003;PV4=0.637186,1,1,0.348215 GT:PL 0/1:210,0,185
Scaffold_1 680634 . G A 159.009 PASS DP=18;VDB=0.152401;SGB=-0.651104;RPB=0.971479;MQB=1;MQSB=1;BQB=0.959189;MQ0F=0;AF1=0.5;AC1=1;DP4=4,5,5,3;MQ=60;FQ=162.012;PV4=0.637186,0.294487,1,1 GT:PL 0/1:189,0,219
Scaffold_1 680636 . G A 153.008 PASS DP=18;VDB=0.200896;SGB=-0.636426;RPB=0.97357;MQB=1;MQSB=1;BQB=0.993326;MQ0F=0;AF1=0.5;AC1=1;DP4=4,4,4,3;MQ=60;FQ=155.847;PV4=1,1,1,1 GT:PL 0/1:183,0,197
Scaffold_1 680638 . C T 151.008 PASS DP=16;VDB=0.202927;SGB=-0.636426;RPB=0.845852;MQB=1;MQSB=1;BQB=0.998327;MQ0F=0;AF1=0.5;AC1=1;DP4=4,4,4,3;MQ=60;FQ=153.982;PV4=1,1,1,1 GT:PL 0/1:181,0,202
Scaffold_1 680657 . A C 174.009 PASS DP=18;VDB=0.650145;SGB=-0.662043;RPB=0.9986;MQB=1;MQSB=1;BQB=0.603142;MQ0F=0;AF1=0.5;AC1=1;DP4=4,3,7,2;MQ=60;FQ=148.011;PV4=0.596154,1,1,0.342667 GT:PL 0/1:204,0,175
Scaffold_1 680661 . C T 145.008 PASS DP=18;VDB=0.575705;SGB=-0.651104;RPB=0.978183;MQB=1;MQSB=1;BQB=0.45198;MQ0F=0;AF1=0.5;AC1=1;DP4=4,4,6,2;MQ=60;FQ=148.012;PV4=0.608392,0.174086,1,1 GT:PL 0/1:175,0,205
Scaffold_1 680683 . C T 142.008 PASS DP=17;VDB=0.462061;SGB=-0.636426;RPB=0.987474;MQB=1;MQSB=1;BQB=0.933674;MQ0F=0;AF1=0.5;AC1=1;DP4=3,6,4,3;MQ=60;FQ=145.016;PV4=0.61451,0.446935,1,1 GT:PL 0/1:172,0,214
Scaffold_1 680704 . C T 78.0075 PASS DP=18;VDB=0.455272;SGB=-0.616816;RPB=0.939413;MQB=1;MQSB=1;BQB=0.0540199;MQ0F=0;AF1=0.5;AC1=1;DP4=4,5,3,3;MQ=60;FQ=81.0157;PV4=1,0.0014326,1,1 GT:PL 0/1:108,0,229
Scaffold_1 680705 . G A 129.008 PASS DP=18;VDB=0.666245;SGB=-0.651104;RPB=0.99606;MQB=1;MQSB=1;BQB=0.123915;MQ0F=0;AF1=0.5;AC1=1;DP4=4,6,4,4;MQ=60;FQ=132.016;PV4=1,0.0119344,1,1 GT:PL 0/1:159,0,238
Scaffold_1 680718 . C T 139.008 PASS DP=19;VDB=0.748002;SGB=-0.651104;RPB=0.800884;MQB=1;MQSB=1;BQB=0.258985;MQ0F=0;AF1=0.5;AC1=1;DP4=6,4,3,5;MQ=60;FQ=142.016;PV4=0.637186,0.0388061,1,1 GT:PL 0/1:169,0,240
Scaffold_1 680751 . T C 121.008 PASS DP=17;VDB=0.143887;SGB=-0.616816;RPB=0.902954;MQB=0.875173;MQSB=0.945959;BQB=0.740818;MQ0F=0;AF1=0.5;AC1=1;DP4=4,4,1,5;MQ=60;FQ=124.016;PV4=0.300699,1,0.132148,1 GT:PL 0/1:151,0,195
Scaffold_1 680753 . C T 130.008 PASS DP=17;VDB=0.145738;SGB=-0.636426;RPB=0.994413;MQB=0.892753;MQSB=0.933674;BQB=0.987474;MQ0F=0;AF1=0.5;AC1=1;DP4=5,4,2,5;MQ=60;FQ=133.016;PV4=0.357517,1,0.135575,1 GT:PL 0/1:160,0,214
Scaffold_1 680754 . T G 152.008 PASS DP=16;VDB=0.159342;SGB=-0.636426;RPB=0.87319;MQB=0.898397;MQSB=0.939413;BQB=0.68614;MQ0F=0;AF1=0.5;AC1=1;DP4=4,4,2,5;MQ=60;FQ=154.931;PV4=0.608392,1,0.150968,0.463067 GT:PL 0/1:182,0,199
Scaffold_1 680762 . C G 155.008 PASS DP=17;VDB=0.360182;SGB=-0.651104;RPB=0.971479;MQB=0.687289;MQSB=0.79189;BQB=0.687289;MQ0F=0;AF1=0.5;AC1=1;DP4=5,4,2,6;MQ=58;FQ=157.995;PV4=0.334842,1,0.128715,0.440114 GT:PL 0/1:185,0,208
Scaffold_1 680765 . G A 127.008 PASS DP=17;VDB=0.422204;SGB=-0.636426;RPB=0.86931;MQB=0.635221;MQSB=0.809155;BQB=0.759945;MQ0F=0;AF1=0.5;AC1=1;DP4=5,4,1,6;MQ=58;FQ=130.016;PV4=0.145105,1,0.112528,0.482167 GT:PL 0/1:157,0,227
Scaffold_1 680777 . G A 101.008 PASS DP=18;VDB=0.467796;SGB=-0.636426;RPB=0.914264;MQB=0.635221;MQSB=0.88901;BQB=0.106363;MQ0F=0;AF1=0.5;AC1=1;DP4=3,6,1,6;MQ=58;FQ=104.016;PV4=0.584615,0.0197205,0.112528,1 GT:PL 0/1:131,0,221
Scaffold_1 680790 . T C 89.0077 PASS DP=15;VDB=0.462131;SGB=-0.616816;RPB=0.810528;MQB=0.569783;MQSB=0.872525;BQB=0.367879;MQ0F=0;AF1=0.5;AC1=1;DP4=4,5,0,6;MQ=58;FQ=92.0158;PV4=0.103297,1,0.0941964,1 GT:PL 0/1:119,0,226
Scaffold_1 680792 . T C 89.0077 PASS DP=15;VDB=0.482766;SGB=-0.616816;RPB=0.810528;MQB=0.569783;MQSB=0.872525;BQB=0.778801;MQ0F=0;AF1=0.5;AC1=1;DP4=4,5,0,6;MQ=58;FQ=92.0158;PV4=0.103297,1,0.0941964,1 GT:PL 0/1:119,0,220
Scaffold_1 680794 . A G 91.0077 PASS DP=15;VDB=0.503448;SGB=-0.616816;RPB=0.84472;MQB=0.586646;MQSB=0.896649;BQB=0.927743;MQ0F=0;AF1=0.5;AC1=1;DP4=3,5,0,6;MQ=58;FQ=94.0158;PV4=0.208791,1,0.108737,1 GT:PL 0/1:121,0,208
Scaffold_1 680798 . G A 87.0076 PASS DP=15;VDB=0.510342;SGB=-0.616816;RPB=0.810528;MQB=0.569783;MQSB=0.872525;BQB=0.810528;MQ0F=0;AF1=0.5;AC1=1;DP4=4,5,0,6;MQ=58;FQ=90.0158;PV4=0.103297,1,0.0941964,1 GT:PL 0/1:117,0,220
Scaffold_1 680836 . T G 51.0072 PASS DP=13;VDB=0.811811;SGB=-0.556411;RPB=0.643095;MQB=0.200967;MQSB=0.891517;BQB=0.763675;MQ0F=0;AF1=0.5;AC1=1;DP4=4,3,1,3;MQ=55;FQ=54.0154;PV4=0.545455,1,0.0137453,1 GT:PL 0/1:81,0,187
Scaffold_1 680840 . T C 47.0072 PASS DP=12;VDB=0.784982;SGB=-0.556411;RPB=0.643095;MQB=0.200967;MQSB=0.891517;BQB=0.562708;MQ0F=0;AF1=0.5;AC1=1;DP4=4,3,1,3;MQ=55;FQ=50.0153;PV4=0.545455,1,0.0137453,0.469899 GT:PL 0/1:77,0,179
Scaffold_1 680845 . T C 32.0097 PASS DP=13;VDB=0.775568;SGB=-0.556411;RPB=0.94394;MQB=0.125315;MQSB=0.864013;BQB=0.838046;MQ0F=0;AF1=0.5;AC1=1;DP4=5,3,1,3;MQ=55;FQ=35.0165;PV4=0.545455,0.462039,0.00885985,1 GT:PL 0/1:62,0,195
Scaffold_1 680846 . G A 18.0749 PASS DP=13;VDB=0.62656;SGB=-0.511536;RPB=0.979382;MQB=0.0497871;MQSB=0.8618;BQB=0.655816;MQ0F=0;AF1=0.499996;AC1=1;DP4=5,3,1,2;MQ=55;FQ=21.0492;PV4=0.545455,1,0.00116634,1 GT:PL 0/1:48,0,212
Scaffold_1 680848 . T C 55.0072 PASS DP=13;VDB=0.746873;SGB=-0.590765;RPB=0.896474;MQB=0.253351;MQSB=0.935451;BQB=0.95494;MQ0F=0;AF1=0.5;AC1=1;DP4=4,3,1,4;MQ=55;FQ=58.0154;PV4=0.292929,0.386655,0.0295755,1 GT:PL 0/1:85,0,177
Scaffold_1 680860 . G A 39.0076 PASS DP=14;VDB=0.714437;SGB=-0.556411;RPB=0.924449;MQB=0.200967;MQSB=0.891517;BQB=0.924449;MQ0F=0;AF1=0.5;AC1=1;DP4=4,3,1,3;MQ=55;FQ=42.0155;PV4=0.545455,1,0.0137453,1 GT:PL 0/1:69,0,194
Scaffold_1 680866 . C T 78.0075 PASS DP=12;VDB=0.677613;SGB=-0.590765;RPB=0.950952;MQB=0.297172;MQSB=0.964642;BQB=0.8618;MQ0F=0;AF1=0.5;AC1=1;DP4=3,3,1,4;MQ=55;FQ=81.0157;PV4=0.545455,1,0.0412978,0.371786 GT:PL 0/1:108,0,177
Scaffold_1 680885 . T C 46.0072 PASS DP=11;VDB=0.360777;SGB=-0.556411;RPB=0.895781;MQB=0.503877;MQSB=0.895781;BQB=1.00775;MQ0F=0;AF1=0.5;AC1=1;DP4=3,3,1,3;MQ=54;FQ=49.0153;PV4=0.571429,1,0.0305243,0.423815 GT:PL 0/1:76,0,180
Scaffold_1 680891 . G C 37.0079 PASS DP=10;VDB=0.0625499;SGB=-0.556411;RPB=0.974597;MQB=0.89338;MQSB=0.730948;BQB=0.974597;MQ0F=0;AF1=0.5;AC1=1;DP4=2,3,2,2;MQ=57;FQ=40.0156;PV4=1,1,0.146176,1 GT:PL 0/1:67,0,154
Scaffold_1 680909 . C T 37.0079 PASS DP=11;VDB=0.259298;SGB=-0.511536;RPB=0.824834;MQB=0.733186;MQSB=0.783809;BQB=0.916482;MQ0F=0;AF1=0.5;AC1=1;DP4=3,4,1,2;MQ=57;FQ=40.0156;PV4=1,1,0.0664005,0.47035 GT:PL 0/1:67,0,204
Scaffold_1 680915 . G A 41.0074 PASS DP=11;VDB=0.220755;SGB=-0.511536;RPB=0.994805;MQB=1;MQSB=1;BQB=0.994805;MQ0F=0;AF1=0.5;AC1=1;DP4=3,5,0,3;MQ=60;FQ=44.0154;PV4=0.490909,1,1,1 GT:PL 0/1:71,0,208
Scaffold_1 680916 . A G 46.0072 PASS DP=11;VDB=0.21346;SGB=-0.511536;RPB=0.824834;MQB=0.916482;MQSB=0.916482;BQB=0.733186;MQ0F=0;AF1=0.5;AC1=1;DP4=3,4,0,3;MQ=60;FQ=49.0153;PV4=0.475,1,1,1 GT:PL 0/1:76,0,197
Scaffold_1 680930 . C T 39.0076 PASS DP=9;VDB=0.220755;SGB=-0.511536;RPB=0.809011;MQB=0.924584;MQSB=0.924584;BQB=0.577865;MQ0F=0;AF1=0.5;AC1=1;DP4=3,3,0,3;MQ=60;FQ=42.0155;PV4=0.464286,0.170988,1,1 GT:PL 0/1:69,0,175
Scaffold_1 680935 . C A 43.0073 PASS DP=9;VDB=0.220755;SGB=-0.511536;RPB=0.809011;MQB=0.924584;MQSB=0.924584;BQB=0.809011;MQ0F=0;AF1=0.5;AC1=1;DP4=3,3,0,3;MQ=60;FQ=46.0153;PV4=0.464286,0.318301,1,1 GT:PL 0/1:73,0,175
Scaffold_1 680936 . A T 46.0072 PASS DP=9;VDB=0.220755;SGB=-0.511536;RPB=0.809011;MQB=0.924584;MQSB=0.924584;BQB=0.924584;MQ0F=0;AF1=0.5;AC1=1;DP4=3,3,0,3;MQ=60;FQ=49.0153;PV4=0.464286,0.313142,1,1 GT:PL 0/1:76,0,179
Scaffold_1 680937 . C T 49.0072 PASS DP=9;VDB=0.235765;SGB=-0.511536;RPB=0.809011;MQB=0.924584;MQSB=0.924584;BQB=0.924584;MQ0F=0;AF1=0.5;AC1=1;DP4=3,3,0,3;MQ=60;FQ=52.0153;PV4=0.464286,1,1,0.478172 GT:PL 0/1:79,0,182
Scaffold_1 680966 . A C 48.0072 PASS DP=7;VDB=0.707536;SGB=-0.511536;RPB=1.01283;MQB=0.405132;MQSB=0.6;BQB=0.810265;MQ0F=0;AF1=0.5;AC1=1;DP4=2,2,0,3;MQ=57;FQ=51.0153;PV4=0.428571,0.142795,0.096618,0.0652865 GT:PL 0/1:78,0,130
Scaffold_1 680974 . G A 39.0076 PASS DP=9;VDB=0.421281;SGB=-0.511536;RPB=0.462292;MQB=0.346719;MQSB=0.714286;BQB=0.924584;MQ0F=0;AF1=0.5;AC1=1;DP4=2,4,0,3;MQ=58;FQ=42.0155;PV4=0.5,1,0.0481322,1 GT:PL 0/1:69,0,156
Scaffold_1 682257 . A G 15.1417 PASS DP=8;VDB=0.02;SGB=-0.453602;RPB=0.166667;MQB=1;MQSB=0.900802;BQB=0.5;MQ0F=0;AF1=0.499992;AC1=1;DP4=3,3,2,0;MQ=60;FQ=18.0829;PV4=0.464286,0.0390704,1,1 GT:PL 0/1:45,0,184
Scaffold_1 691278 . A G 36.0081 PASS DP=16;VDB=0.292086;SGB=-0.556411;RPB=0.913931;MQB=0.0183156;MQSB=0.411112;BQB=0.997503;MQ0F=0;AF1=0.5;AC1=1;DP4=5,5,4,0;MQ=54;FQ=39.0157;PV4=0.220779,0.451961,3.2499e-05,1 GT:PL 0/1:66,0,235
Scaffold_1 691286 . G A 28.0137 PASS DP=16;VDB=0.303109;SGB=-0.556411;RPB=1;MQB=0.0144756;MQSB=0.333524;BQB=0.861658;MQ0F=0;AF1=0.5;AC1=1;DP4=5,7,4,0;MQ=55;FQ=31.0185;PV4=0.0884615,0.246011,5.86282e-06,1 GT:PL 0/1:58,0,255
Scaffold_1 691351 . G A 38.0077 PASS DP=15;VDB=0.459448;SGB=-0.556411;RPB=1;MQB=0.054101;MQSB=0.778801;BQB=0.900862;MQ0F=0;AF1=0.5;AC1=1;DP4=4,7,2,2;MQ=52;FQ=41.0155;PV4=1,0.241163,0.00962706,1 GT:PL 0/1:68,0,223
Scaffold_1 691369 . A G 52.0072 PASS DP=17;VDB=0.391905;SGB=-0.590765;RPB=0.829029;MQB=0.00920968;MQSB=0.868815;BQB=0.184981;MQ0F=0;AF1=0.5;AC1=1;DP4=3,7,3,2;MQ=52;FQ=55.0154;PV4=0.328671,1,1.05109e-05,1 GT:PL 0/1:82,0,214
Scaffold_1 691405 . C T 27.0155 PASS DP=17;VDB=0.27062;SGB=-0.556411;RPB=0.90252;MQB=0.0389611;MQSB=0.998738;BQB=0.94394;MQ0F=0;AF1=0.499999;AC1=1;DP4=5,8,1,3;MQ=53;FQ=30.0194;PV4=1,0.376324,0.00560254,1 GT:PL 0/1:57,0,255
Scaffold_1 691410 . C T 35.0083 PASS DP=17;VDB=0.27062;SGB=-0.556411;RPB=0.935966;MQB=0.0454986;MQSB=0.986852;BQB=0.983592;MQ0F=0;AF1=0.5;AC1=1;DP4=5,7,1,3;MQ=53;FQ=38.0158;PV4=1,0.360371,0.00761871,1 GT:PL 0/1:65,0,255
Scaffold_1 691497 . G A 48.0072 PASS DP=13;VDB=0.941105;SGB=-0.511536;RPB=0.213796;MQB=0.0443614;MQSB=0.71154;BQB=0.983051;MQ0F=0;AF1=0.5;AC1=1;DP4=5,4,1,2;MQ=56;FQ=51.0153;PV4=1,1,1.22695e-07,1 GT:PL 0/1:78,0,233
Scaffold_1 691543 . T G 53.0072 PASS DP=10;VDB=0.450604;SGB=-0.511536;RPB=0.733186;MQB=0.0916482;MQSB=1.00775;BQB=0.824834;MQ0F=0;AF1=0.5;AC1=1;DP4=3,4,1,2;MQ=56;FQ=56.0154;PV4=1,1,9.15314e-08,0.288274 GT:PL 0/1:83,0,192
Scaffold_1 691549 . T G 16.1143 PASS DP=10;VDB=0.06;SGB=-0.453602;RPB=0.714286;MQB=0.142857;MQSB=0.924584;BQB=0.857143;MQ0F=0;AF1=0.499994;AC1=1;DP4=2,5,1,1;MQ=56;FQ=19.069;PV4=1,0.323056,0.00903153,1 GT:PL 0/1:46,0,183
Scaffold_1 691550 . G T 53.0072 PASS DP=10;VDB=0.450604;SGB=-0.511536;RPB=0.924584;MQB=0.115573;MQSB=0.924584;BQB=0.924584;MQ0F=0;AF1=0.5;AC1=1;DP4=2,4,1,2;MQ=56;FQ=56.0154;PV4=1,0.342264,6.81003e-07,0.18994 GT:PL 0/1:83,0,169
Scaffold_1 691553 . G A 60.0073 PASS DP=9;VDB=0.450604;SGB=-0.511536;RPB=0.924584;MQB=0.115573;MQSB=0.924584;BQB=0.462292;MQ0F=0;AF1=0.5;AC1=1;DP4=2,4,1,2;MQ=56;FQ=63.0154;PV4=1,1,6.81003e-07,0.392441 GT:PL 0/1:90,0,168
Scaffold_1 691568 . T A 15.1417 PASS DP=14;VDB=0.06;SGB=-0.453602;RPB=0.409091;MQB=0.0909091;MQSB=0.961166;BQB=0.272727;MQ0F=0;AF1=0.499992;AC1=1;DP4=5,6,1,1;MQ=57;FQ=18.0829;PV4=1,1,0.000832006,1 GT:PL 0/1:45,0,252
Scaffold_1 691664 . T A 10.42 PASS DP=13;VDB=0.6;SGB=-0.453602;RPB=0.5;MQB=0.55;MQSB=0.793923;BQB=0.7;MQ0F=0;AF1=0.499975;AC1=1;DP4=4,6,0,2;MQ=58;FQ=13.2265;PV4=0.515152,1,0.0612838,1 GT:PL 0/1:40,0,239
Scaffold_1 691668 . T G 13.2188 PASS DP=13;VDB=0.6;SGB=-0.453602;RPB=0.555556;MQB=0.555556;MQSB=0.763675;BQB=0.888889;MQ0F=0;AF1=0.499987;AC1=1;DP4=4,5,0,2;MQ=57;FQ=16.1222;PV4=0.490909,1,0.0768252,1 GT:PL 0/1:43,0,238
Scaffold_1 702872 . C T 12.272 PASS DP=19;VDB=0.0822145;SGB=-0.511536;RPB=0.082085;MQB=0.0273237;MQSB=0.996435;BQB=0.568893;MQ0F=0;AF1=0.499984;AC1=1;DP4=10,6,2,1;MQ=57;FQ=15.1496;PV4=1,0.100403,0,0.259114 GT:PL 0/1:42,0,255
Scaffold_1 702955 . T G 39.0076 PASS DP=15;VDB=0.0785113;SGB=-0.511536;RPB=0.976835;MQB=0.0342181;MQSB=0.87319;BQB=0.556584;MQ0F=0;AF1=0.5;AC1=1;DP4=5,7,2,1;MQ=57;FQ=42.0155;PV4=0.569231,1,0,1 GT:PL 0/1:69,0,255
Scaffold_1 702980 . T G 45.0072 PASS DP=13;VDB=0.0822145;SGB=-0.511536;RPB=0.795669;MQB=0.040184;MQSB=0.828239;BQB=0.879351;MQ0F=0;AF1=0.5;AC1=1;DP4=4,6,2,1;MQ=56;FQ=48.0153;PV4=0.559441,1,0,1 GT:PL 0/1:75,0,238
Scaffold_1 702982 . C T 46.0072 PASS DP=12;VDB=0.074936;SGB=-0.511536;RPB=0.540433;MQB=0.0443614;MQSB=0.760054;BQB=0.857404;MQ0F=0;AF1=0.5;AC1=1;DP4=3,6,2,1;MQ=56;FQ=49.0153;PV4=0.522727,0.208894,0,0.39828 GT:PL 0/1:76,0,234
Scaffold_1 702984 . A G 48.0072 PASS DP=12;VDB=0.0785113;SGB=-0.511536;RPB=0.540433;MQB=0.0443614;MQSB=0.760054;BQB=0.707404;MQ0F=0;AF1=0.5;AC1=1;DP4=3,6,2,1;MQ=56;FQ=51.0153;PV4=0.522727,1,0,0.34204 GT:PL 0/1:78,0,221
Scaffold_1 702993 . T C 48.0072 PASS DP=12;VDB=0.0785113;SGB=-0.511536;RPB=0.25042;MQB=0.0443614;MQSB=0.864013;BQB=0.540433;MQ0F=0;AF1=0.5;AC1=1;DP4=4,5,2,1;MQ=56;FQ=51.0153;PV4=1,1,0,0.195397 GT:PL 0/1:78,0,219
Scaffold_1 702995 . G T 51.0072 PASS DP=12;VDB=0.0822145;SGB=-0.511536;RPB=0.263597;MQB=0.0497871;MQSB=0.742931;BQB=0.829029;MQ0F=0;AF1=0.5;AC1=1;DP4=3,5,2,1;MQ=55;FQ=54.0154;PV4=0.545455,1,0,0.165782 GT:PL 0/1:81,0,213
Scaffold_1 707110 . G A 40.0075 PASS DP=13;VDB=0.607612;SGB=-0.511536;RPB=0.290822;MQB=0.0443614;MQSB=0.594978;BQB=0.540433;MQ0F=0;AF1=0.5;AC1=1;DP4=5,4,3,0;MQ=57;FQ=43.0154;PV4=0.490909,1,0.000362877,0.432706 GT:PL 0/1:70,0,222
Scaffold_1 707131 . A G 41.0074 PASS DP=12;VDB=0.598038;SGB=-0.511536;RPB=0.360295;MQB=0.0497871;MQSB=0.655816;BQB=0.716531;MQ0F=0;AF1=0.5;AC1=1;DP4=5,3,3,0;MQ=57;FQ=44.0154;PV4=0.490909,1,0.00076364,1 GT:PL 0/1:71,0,175
Scaffold_1 707173 . G C 19.061 PASS DP=10;VDB=0.06;SGB=-0.453602;RPB=0.857143;MQB=0;MQSB=0.649731;BQB=0.714286;MQ0F=0;AF1=0.499997;AC1=1;DP4=3,4,2,0;MQ=58;FQ=22.0421;PV4=0.444444,1,0.00433477,1 GT:PL 0/1:49,0,190
Scaffold_1 707177 . C G 16.1143 PASS DP=10;VDB=0.02;SGB=-0.453602;RPB=0.75;MQB=0;MQSB=0.523791;BQB=0.625;MQ0F=0;AF1=0.499994;AC1=1;DP4=3,5,2,0;MQ=58;FQ=19.069;PV4=0.444444,1,0.00224139,1 GT:PL 0/1:46,0,203
Scaffold_1 707184 . A G 19.061 PASS DP=10;VDB=0.06;SGB=-0.453602;RPB=0.857143;MQB=0;MQSB=0.487298;BQB=0.428571;MQ0F=0;AF1=0.499997;AC1=1;DP4=2,5,2,0;MQ=58;FQ=22.0421;PV4=0.166667,1,0.00433477,1 GT:PL 0/1:49,0,173
Scaffold_1 707198 . C T 16.1143 PASS DP=10;VDB=0.06;SGB=-0.453602;RPB=1;MQB=0;MQSB=0.503877;BQB=0.5;MQ0F=0;AF1=0.499994;AC1=1;DP4=2,6,2,0;MQ=58;FQ=19.069;PV4=0.133333,1,0.00224139,1 GT:PL 0/1:46,0,182
Scaffold_1 707218 . C T 12.272 PASS DP=9;VDB=0.06;SGB=-0.453602;RPB=0.857143;MQB=0;MQSB=0.487298;BQB=0.857143;MQ0F=0;AF1=0.499984;AC1=1;DP4=2,5,2,0;MQ=58;FQ=15.1496;PV4=0.166667,0.402057,0.00433477,0.473971 GT:PL 0/1:42,0,183
Scaffold_1 707535 . T C 10.42 PASS DP=17;VDB=0.309755;SGB=-0.511536;RPB=0.992095;MQB=0.0301974;MQSB=0.731616;BQB=0.563599;MQ0F=0;AF1=0.499975;AC1=1;DP4=5,9,0,3;MQ=58;FQ=13.2265;PV4=0.514706,0.0559467,7.29398e-06,1 GT:PL 0/1:40,0,255
Scaffold_1 707536 . A T 20.0499 PASS DP=17;VDB=0.301053;SGB=-0.511536;RPB=1;MQB=0.0301974;MQSB=0.731616;BQB=0.786565;MQ0F=0;AF1=0.499997;AC1=1;DP4=5,9,0,3;MQ=58;FQ=23.0366;PV4=0.514706,0.478677,7.29398e-06,1 GT:PL 0/1:50,0,255
Scaffold_1 707560 . A T 21.0411 PASS DP=16;VDB=0.301053;SGB=-0.511536;RPB=0.997399;MQB=0.0342181;MQSB=0.655816;BQB=0.989637;MQ0F=0;AF1=0.499998;AC1=1;DP4=5,7,0,3;MQ=58;FQ=24.0321;PV4=0.505495,0.176071,3.25625e-05,1 GT:PL 0/1:51,0,255
Scaffold_1 722448 . A G 134.133 PASS DP=8;VDB=0.831298;SGB=-0.616816;MQSB=0.861511;MQ0F=0;AF1=1;AC1=2;DP4=0,0,3,3;MQ=60;FQ=-44.9861 GT:PL 1/1:167,18,0
Scaffold_1 724492 . A G 27.0155 PASS DP=22;VDB=0.0058656;SGB=-0.556411;RPB=0.167677;MQB=1;MQSB=1;BQB=0.851535;MQ0F=0;AF1=0.499999;AC1=1;DP4=8,8,4,0;MQ=60;FQ=30.0194;PV4=0.116615,0.179073,1,1 GT:PL 0/1:57,0,255
Scaffold_1 745458 . G C 22.0341 PASS DP=8;VDB=0.0117389;SGB=-0.556411;RPB=0.202566;MQB=0.202566;MQSB=0.1;BQB=0.202566;MQ0F=0;AF1=0.499998;AC1=1;DP4=1,2,4,0;MQ=42;FQ=25.0282;PV4=0.142857,0.0542562,0.0196405,0.00656655 GT:PL 0/1:52,0,92
Scaffold_1 745492 . C T 56.0072 PASS DP=12;VDB=0.00490644;SGB=-0.590765;RPB=0.950952;MQB=0.297172;MQSB=0.562708;BQB=0.208021;MQ0F=0.0833333;AF1=0.5;AC1=1;DP4=3,3,4,1;MQ=38;FQ=59.0154;PV4=0.545455,0.0151359,0.163705,1 GT:PL 0/1:86,0,143
Scaffold_1 745552 . T C 24.0241 PASS DP=17;VDB=0.106137;SGB=-0.590765;RPB=0.427987;MQB=0.0767774;MQSB=0.0781463;BQB=0.902421;MQ0F=0.117647;AF1=0.499999;AC1=1;DP4=4,7,4,1;MQ=41;FQ=27.0236;PV4=0.282051,0.27987,0.0147889,1 GT:PL 0/1:54,0,221
Scaffold_1 745561 . A G 63.0073 PASS DP=18;VDB=0.582705;SGB=-0.651104;RPB=1;MQB=0.00499343;MQSB=0.0664381;BQB=0.871214;MQ0F=0.111111;AF1=0.5;AC1=1;DP4=2,6,7,1;MQ=42;FQ=66.0155;PV4=0.0405594,1,0.00021087,0.373234 GT:PL 0/1:93,0,174
Scaffold_1 745941 . C T 39.0076 PASS DP=19;VDB=0.19611;SGB=-0.616816;RPB=0.940006;MQB=0.398338;MQSB=0.259823;BQB=0.78077;MQ0F=0.105263;AF1=0.5;AC1=1;DP4=4,7,0,6;MQ=35;FQ=42.0155;PV4=0.237395,1,0.118485,0.304935 GT:PL 0/1:69,0,206
Scaffold_1 776223 . A G 22.0341 PASS DP=7;VDB=0.14;SGB=-0.453602;RPB=0.4;MQB=1;MQSB=1;BQB=0.6;MQ0F=0;AF1=0.499998;AC1=1;DP4=2,3,0,2;MQ=60;FQ=25.0286;PV4=1,1,1,1 GT:PL 0/1:52,0,128
Scaffold_1 778919 . G A 18.0749 PASS DP=22;VDB=0.0221621;SGB=-0.511536;RPB=0.118807;MQB=1;MQSB=1;BQB=0.892753;MQ0F=0;AF1=0.499996;AC1=1;DP4=11,6,3,0;MQ=60;FQ=21.0492;PV4=0.521053,0.41198,1,1 GT:PL 0/1:48,0,255
Scaffold_1 787914 . G T 16.1143 PASS DP=10;VDB=0.02;SGB=-0.453602;RPB=0.285714;MQB=1;MQSB=1;BQB=0.928571;MQ0F=0;AF1=0.499994;AC1=1;DP4=5,2,2,0;MQ=60;FQ=19.069;PV4=1,1,1,1 GT:PL 0/1:46,0,177
Scaffold_1 791020 . G A 28.0137 PASS DP=6;VDB=0.02;SGB=-0.453602;RPB=1;MQB=1;MQSB=0.861511;BQB=1;MQ0F=0;AF1=0.5;AC1=1;DP4=1,3,2,0;MQ=60;FQ=31.0185;PV4=0.4,1,1,1 GT:PL 0/1:58,0,128
Scaffold_1 796168 . A G 20.0499 PASS DP=10;VDB=0.18;SGB=-0.453602;RPB=1;MQB=0.333333;MQSB=1;BQB=0.833333;MQ0F=0;AF1=0.499997;AC1=1;DP4=5,1,2,0;MQ=52;FQ=23.0366;PV4=1,1,0.198254,1 GT:PL 0/1:50,0,146
Scaffold_1 796171 . A G 20.0499 PASS DP=10;VDB=0.22;SGB=-0.453602;RPB=0.833333;MQB=0.333333;MQSB=1;BQB=0.666667;MQ0F=0;AF1=0.499997;AC1=1;DP4=5,1,2,0;MQ=52;FQ=23.0366;PV4=1,1,0.198254,1 GT:PL 0/1:50,0,146
Scaffold_1 796183 . T C 21.0411 PASS DP=11;VDB=0.490096;SGB=-0.511536;RPB=0.900802;MQB=0.150134;MQSB=1;BQB=0.750668;MQ0F=0;AF1=0.499998;AC1=1;DP4=4,1,3,0;MQ=52;FQ=24.0321;PV4=1,0.109972,0.00174157,1 GT:PL 0/1:51,0,145
Scaffold_1 796361 . C A 70.0074 PASS DP=13;VDB=0.588406;SGB=-0.590765;RPB=0.213769;MQB=0.0137638;MQSB=0.84246;BQB=0.876998;MQ0F=0;AF1=0.5;AC1=1;DP4=4,4,4,1;MQ=52;FQ=73.0156;PV4=0.56488,1,9.27888e-06,0.00496525 GT:PL 0/1:100,0,212
Scaffold_1 796371 . A G 65.0073 PASS DP=14;VDB=0.588406;SGB=-0.590765;RPB=0.448332;MQB=0.011109;MQSB=0.740818;BQB=0.867428;MQ0F=0;AF1=0.5;AC1=1;DP4=4,5,4,1;MQ=52;FQ=68.0155;PV4=0.300699,0.259274,3.00807e-06,1 GT:PL 0/1:95,0,234
Scaffold_1 796373 . C G 63.0073 PASS DP=14;VDB=0.60592;SGB=-0.590765;RPB=0.448332;MQB=0.011109;MQSB=0.740818;BQB=0.800737;MQ0F=0;AF1=0.5;AC1=1;DP4=4,5,4,1;MQ=52;FQ=66.0155;PV4=0.300699,0.11177,3.00807e-06,1 GT:PL 0/1:93,0,233
Scaffold_1 796386 . T G 54.0072 PASS DP=14;VDB=0.0424884;SGB=-0.590765;RPB=0.0137638;MQB=0.0137638;MQSB=0.50373;BQB=0.908075;MQ0F=0;AF1=0.5;AC1=1;DP4=4,4,4,1;MQ=53;FQ=57.0154;PV4=0.56488,0.302959,4.6803e-07,1 GT:PL 0/1:84,0,214
Scaffold_1 796390 . A G 80.0075 PASS DP=14;VDB=0.0385499;SGB=-0.590765;RPB=0.0477287;MQB=0.011109;MQSB=0.434598;BQB=0.686908;MQ0F=0;AF1=0.5;AC1=1;DP4=4,5,4,1;MQ=54;FQ=83.0157;PV4=0.300699,1,1.13935e-07,1 GT:PL 0/1:110,0,207
Scaffold_1 796404 . T C 117.008 PASS DP=13;VDB=0.101965;SGB=-0.616816;RPB=0.777113;MQB=0.0102252;MQSB=0.245404;BQB=0.143152;MQ0F=0;AF1=0.5;AC1=1;DP4=2,5,4,2;MQ=52;FQ=109.602;PV4=0.286131,1,6.36479e-07,1 GT:PL 0/1:147,0,137
Scaffold_1 796433 . A G 10.42 PASS DP=14;VDB=0.18;SGB=-0.453602;RPB=0.35;MQB=0.8;MQSB=0.0974428;BQB=0.7;MQ0F=0;AF1=0.499975;AC1=1;DP4=5,5,0,2;MQ=51;FQ=13.2265;PV4=0.469697,1,0.267126,1 GT:PL 0/1:40,0,237
Scaffold_1 796457 . G C 44.0073 PASS DP=13;VDB=0.00992398;SGB=-0.556411;RPB=0.304076;MQB=0.0211283;MQSB=0.0897512;BQB=0.997028;MQ0F=0;AF1=0.5;AC1=1;DP4=1,8,4,0;MQ=52;FQ=47.0153;PV4=0.00699301,1,0.000136525,1 GT:PL 0/1:74,0,169
Scaffold_1 796458 . A G 119.008 PASS DP=13;VDB=0.0959456;SGB=-0.616816;RPB=0.475476;MQB=0.0297172;MQSB=0.0401934;BQB=0.683497;MQ0F=0;AF1=0.5;AC1=1;DP4=0,5,4,2;MQ=50;FQ=86.0146;PV4=0.0606061,0.332534,1.26299e-05,1 GT:PL 0/1:149,0,113
Scaffold_1 796472 . T G 101.008 PASS DP=14;VDB=0.0901918;SGB=-0.616816;RPB=0.194278;MQB=0.0102252;MQSB=0.0897512;BQB=0.961166;MQ0F=0;AF1=0.5;AC1=1;DP4=1,6,4,2;MQ=52;FQ=103.75;PV4=0.102564,0.463717,6.36479e-07,1 GT:PL 0/1:131,0,143
Scaffold_1 796494 . A G 13.2188 PASS DP=12;VDB=0.18;SGB=-0.453602;RPB=0.722222;MQB=0.444444;MQSB=0.360295;BQB=0.444444;MQ0F=0;AF1=0.499987;AC1=1;DP4=3,6,0,2;MQ=54;FQ=16.1222;PV4=1,1,0.148642,1 GT:PL 0/1:43,0,200
Scaffold_1 796505 . G T 19.061 PASS DP=10;VDB=0.14;SGB=-0.453602;RPB=0.357143;MQB=0;MQSB=1;BQB=0.571429;MQ0F=0;AF1=0.499997;AC1=1;DP4=1,6,0,2;MQ=57;FQ=22.0421;PV4=1,1,1.41324e-06,1 GT:PL 0/1:49,0,170
Scaffold_1 796638 . A C 39.0076 PASS DP=11;VDB=0.568985;SGB=-0.511536;RPB=0.916482;MQB=0.0916482;MQSB=0.904729;BQB=0.916482;MQ0F=0;AF1=0.5;AC1=1;DP4=4,3,1,2;MQ=54;FQ=42.0155;PV4=1,1,1.57926e-05,1 GT:PL 0/1:69,0,199
Scaffold_1 796683 . A G 58.0073 PASS DP=14;VDB=0.548121;SGB=-0.556411;RPB=0.466776;MQB=0.0211283;MQSB=0.695312;BQB=0.953497;MQ0F=0;AF1=0.5;AC1=1;DP4=6,3,1,3;MQ=54;FQ=61.0154;PV4=0.265734,1,3.37762e-07,0.38027 GT:PL 0/1:88,0,214
Scaffold_1 796725 . A G 50.0072 PASS DP=16;VDB=0.459448;SGB=-0.556411;RPB=0.579578;MQB=0.0161635;MQSB=0.180092;BQB=0.735784;MQ0F=0;AF1=0.5;AC1=1;DP4=8,3,0,4;MQ=55;FQ=53.0153;PV4=0.025641,0.494882,9.27923e-11,1 GT:PL 0/1:80,0,251
Scaffold_1 796739 . T G 50.0072 PASS DP=16;VDB=0.459448;SGB=-0.556411;RPB=0.579578;MQB=0.0161635;MQSB=0.180092;BQB=0.808101;MQ0F=0;AF1=0.5;AC1=1;DP4=8,3,0,4;MQ=55;FQ=53.0153;PV4=0.025641,1,9.27923e-11,0.184842 GT:PL 0/1:80,0,242
Scaffold_1 796741 . T C 32.0097 PASS DP=16;VDB=0.450604;SGB=-0.511536;RPB=0.416546;MQB=0.0368832;MQSB=0.301194;BQB=0.505697;MQ0F=0;AF1=0.5;AC1=1;DP4=8,3,0,3;MQ=56;FQ=35.0165;PV4=0.0549451,1,0,0.1027 GT:PL 0/1:62,0,241
Scaffold_1 800637 . A T 118.042 PASS DP=8;VDB=0.657065;SGB=-0.590765;RPB=1;MQB=1;MQSB=1;BQB=1;MQ0F=0;AF1=0.503994;AC1=1;DP4=0,1,1,4;MQ=53;FQ=-9.50208;PV4=1,1,0.11961,1 GT:PL 0/1:148,0,18
Scaffold_1 800638 . T C 121.019 PASS DP=8;VDB=0.661214;SGB=-0.590765;RPB=1;MQB=1;MQSB=1;BQB=1;MQ0F=0;AF1=0.501256;AC1=1;DP4=0,1,1,4;MQ=53;FQ=-5.445;PV4=1,1,0.11961,1 GT:PL 0/1:151,0,23
Scaffold_1 800639 . C A 131.03 PASS DP=8;VDB=0.381141;SGB=-0.616816;RPB=1;MQB=1;MQSB=0.6;BQB=1;MQ0F=0;AF1=0.502513;AC1=1;DP4=0,1,2,4;MQ=52;FQ=-7.77799;PV4=1,0.30378,0.0853487,1 GT:PL 0/1:161,0,20
Scaffold_1 809796 . A G 13.2188 PASS DP=12;VDB=0.02;SGB=-0.453602;RPB=0.222222;MQB=1;MQSB=1;BQB=0.444444;MQ0F=0;AF1=0.499987;AC1=1;DP4=3,6,0,2;MQ=60;FQ=16.1222;PV4=1,1,1,1 GT:PL 0/1:43,0,204
Scaffold_1 810950 . A G 18.0749 PASS DP=8;VDB=0.6;SGB=-0.453602;RPB=0.2;MQB=0.5;MQSB=0.810265;BQB=0.9;MQ0F=0;AF1=0.499996;AC1=1;DP4=2,3,2,0;MQ=58;FQ=21.0492;PV4=0.428571,1,0.0405276,0.168933 GT:PL 0/1:48,0,142
Scaffold_1 811061 . G A 74.0075 PASS DP=11;VDB=0.364077;SGB=-0.511536;RPB=0.450401;MQB=0.900802;MQSB=1;BQB=0.150134;MQ0F=0;AF1=0.5;AC1=1;DP4=4,1,3,0;MQ=60;FQ=75.8223;PV4=1,1,0.109972,1 GT:PL 0/1:104,0,109
Scaffold_1 811074 . G A 38.0077 PASS DP=11;VDB=0.6;SGB=-0.453602;RPB=0.142857;MQB=1;MQSB=1;BQB=0.5;MQ0F=0;AF1=0.5;AC1=1;DP4=5,2,2,0;MQ=60;FQ=41.0155;PV4=1,1,0.0261782,1 GT:PL 0/1:68,0,202
Scaffold_1 811095 . G A 32.0097 PASS DP=14;VDB=0.84;SGB=-0.453602;RPB=0.875;MQB=0.5;MQSB=0.783809;BQB=0.9375;MQ0F=0;AF1=0.5;AC1=1;DP4=5,3,1,1;MQ=58;FQ=35.0165;PV4=1,1,0.0176326,0.163689 GT:PL 0/1:62,0,227
Scaffold_1 811097 . C T 40.0075 PASS DP=13;VDB=0.82;SGB=-0.453602;RPB=0.857143;MQB=0.5;MQSB=0.809011;BQB=0.928571;MQ0F=0;AF1=0.5;AC1=1;DP4=5,2,1,1;MQ=58;FQ=43.0154;PV4=1,1,0.0261782,0.216643 GT:PL 0/1:70,0,207
Scaffold_1 811106 . G A 29.0123 PASS DP=13;VDB=0.82;SGB=-0.453602;RPB=0.888889;MQB=0.5;MQSB=0.8618;BQB=0.833333;MQ0F=0;AF1=0.5;AC1=1;DP4=5,4,1,1;MQ=58;FQ=32.0178;PV4=1,1,0.0119282,0.42427 GT:PL 0/1:59,0,234
Scaffold_1 811107 . C T 40.0075 PASS DP=13;VDB=0.84;SGB=-0.453602;RPB=0.857143;MQB=0.5;MQSB=0.809011;BQB=0.714286;MQ0F=0;AF1=0.5;AC1=1;DP4=5,2,1,1;MQ=58;FQ=43.0154;PV4=1,1,0.0261782,0.482612 GT:PL 0/1:70,0,193
Scaffold_1 811126 . C T 61.0073 PASS DP=13;VDB=0.868052;SGB=-0.511536;RPB=0.707404;MQB=0.25042;MQSB=0.760054;BQB=0.760709;MQ0F=0;AF1=0.5;AC1=1;DP4=4,5,1,2;MQ=57;FQ=64.0155;PV4=1,1,0.00154704,0.0407767 GT:PL 0/1:91,0,219
Scaffold_1 811134 . C T 69.0074 PASS DP=13;VDB=0.862672;SGB=-0.511536;RPB=0.716531;MQB=0.263597;MQSB=0.683497;BQB=0.774755;MQ0F=0;AF1=0.5;AC1=1;DP4=4,4,1,2;MQ=57;FQ=72.0156;PV4=1,1,0.00279398,0.0519441 GT:PL 0/1:99,0,207
Scaffold_1 811150 . C T 66.0074 PASS DP=13;VDB=0.868052;SGB=-0.511536;RPB=0.707404;MQB=0.25042;MQSB=0.760054;BQB=0.760709;MQ0F=0;AF1=0.5;AC1=1;DP4=4,5,1,2;MQ=57;FQ=69.0155;PV4=1,1,0.00154704,0.0407767 GT:PL 0/1:96,0,222
Scaffold_1 811154 . A G 45.0072 PASS DP=12;VDB=0.617121;SGB=-0.511536;RPB=0.733186;MQB=0.0916482;MQSB=0.503877;BQB=0.274945;MQ0F=0;AF1=0.5;AC1=1;DP4=4,3,0,3;MQ=56;FQ=48.0153;PV4=0.2,1,0.000287532,1 GT:PL 0/1:75,0,185
Scaffold_1 811163 . T C 33.0091 PASS DP=12;VDB=0.617121;SGB=-0.511536;RPB=0.707404;MQB=0.0443614;MQSB=0.594978;BQB=0.898672;MQ0F=0;AF1=0.5;AC1=1;DP4=4,5,0,3;MQ=57;FQ=36.0162;PV4=0.490909,1,4.10792e-05,1 GT:PL 0/1:63,0,208
Scaffold_1 811227 . C A 11.3381 PASS DP=11;VDB=0.22;SGB=-0.453602;RPB=0.444444;MQB=0;MQSB=0.564628;BQB=0.888889;MQ0F=0;AF1=0.49998;AC1=1;DP4=6,3,0,2;MQ=57;FQ=14.1838;PV4=0.181818,1,0,1 GT:PL 0/1:41,0,220
Scaffold_1 813787 . G A 10.42 PASS DP=7;VDB=0.14;SGB=-0.453602;RPB=0.5;MQB=0;MQSB=1;BQB=0.75;MQ0F=0;AF1=0.499975;AC1=1;DP4=3,1,2,0;MQ=52;FQ=13.2265;PV4=1,0.270735,0.00356303,1 GT:PL 0/1:40,0,146
Scaffold_1 814064 . A C 22.7872 PASS DP=3;VDB=0.48;SGB=-0.453602;MQ0F=0;AF1=1;AC1=2;DP4=0,0,0,2;MQ=32;FQ=-32.988 GT:PL 1/1:54,6,0
Scaffold_1 814069 . A G 12.9881 PASS DP=3;VDB=0.52;SGB=-0.453602;MQ0F=0;AF1=1;AC1=2;DP4=0,0,0,2;MQ=32;FQ=-32.9881 GT:PL 1/1:44,6,0
Scaffold_1 814075 . C T 15.1451 PASS DP=3;VDB=0.52;SGB=-0.453602;RPB=1;MQB=1;BQB=1;MQ0F=0;AF1=0.500389;AC1=1;DP4=0,1,0,2;MQ=43;FQ=3.49955;PV4=1,1,0.161955,1 GT:PL 0/1:45,0,28
Scaffold_1 814093 . A G 16.1143 PASS DP=5;VDB=0.64;SGB=-0.453602;RPB=0;MQB=0;MQSB=1;BQB=0;MQ0F=0;AF1=0.499999;AC1=1;DP4=1,1,0,2;MQ=48;FQ=16.5725;PV4=1,1,0.0449676,1 GT:PL 0/1:46,0,47
Scaffold_1 820102 . A G 110.019 PASS DP=20;VDB=0.0202676;SGB=-0.616816;RPB=0.583333;MQB=0.416667;BQB=0.833333;MQ0F=0.1;AF1=0.501256;AC1=1;DP4=2,0,6,0;MQ=46;FQ=-5.445;PV4=1,1,1,0.228487 GT:PL 0/1:140,0,23
Scaffold_1 820250 . A G 159.009 PASS DP=69;VDB=4.22835e-07;SGB=-0.690438;RPB=0.24278;MQB=0.0284972;MQSB=0.154764;BQB=0.186352;MQ0F=0.376812;AF1=0.5;AC1=1;DP4=21,2,13,4;MQ=23;FQ=42.0155;PV4=0.372506,1,1,1 GT:PL 0/1:189,0,69
Scaffold_1 820277 . C A 55.0072 PASS DP=115;VDB=4.77293e-06;SGB=-0.692562;RPB=0.663907;MQB=0.727682;MQSB=0.0823008;BQB=0.280392;MQ0F=0.295652;AF1=0.5;AC1=1;DP4=47,11,19,3;MQ=22;FQ=58.0154;PV4=0.746914,0.0402105,1,0.308653 GT:PL 0/1:85,0,209
Scaffold_1 820332 . G A 121.008 PASS DP=116;VDB=6.15259e-05;SGB=-0.692352;RPB=0.998959;MQB=0.991533;MQSB=0.63868;BQB=0.391606;MQ0F=0.310345;AF1=0.5;AC1=1;DP4=36,12,16,5;MQ=25;FQ=124.016;PV4=1,1,1,0.113112 GT:PL 0/1:151,0,255
Scaffold_1 820342 . A G 37.0079 PASS DP=106;VDB=0.000148157;SGB=-0.692831;RPB=0.859854;MQB=0.0191674;MQSB=0.615305;BQB=0.147732;MQ0F=0.292453;AF1=0.5;AC1=1;DP4=22,11,18,6;MQ=27;FQ=40.0156;PV4=0.567474,0.040504,0.00074086,1 GT:PL 0/1:67,0,255
Scaffold_1 820361 . A G 75.0075 PASS DP=77;VDB=0.205465;SGB=-0.683931;RPB=0.627971;MQB=0.979048;MQSB=0.0569786;BQB=0.674491;MQ0F=0.246753;AF1=0.5;AC1=1;DP4=21,10,9,4;MQ=26;FQ=78.0156;PV4=1,1,1,1 GT:PL 0/1:105,0,195
Scaffold_1 820986 . C A 64.7957 PASS DP=55;VDB=1.36438e-12;SGB=-0.692562;RPB=0.579578;MQB=0.323961;MQSB=0.0776472;BQB=0.19575;MQ0F=0.254545;AF1=0.624261;AC1=1;DP4=6,3,15,7;MQ=16;FQ=-23.0074;PV4=1,0.00562077,1,0.164924 GT:PL 0/1:94,0,4
Scaffold_1 821027 . G A 163.009 PASS DP=282;VDB=5.62846e-12;SGB=-0.693146;RPB=0.985645;MQB=0.995627;MQSB=0.898504;BQB=0.0235552;MQ0F=0.117021;AF1=0.5;AC1=1;DP4=82,34,31,13;MQ=32;FQ=166.017;PV4=1,0.00580177,1,0.454429 GT:PL 0/1:193,0,255
Scaffold_1 821028 . C G 183.009 PASS DP=286;VDB=9.35907e-24;SGB=-0.693147;RPB=0.914923;MQB=0.958133;MQSB=0.742429;BQB=0.000527036;MQ0F=0.122378;AF1=0.5;AC1=1;DP4=77,32,40,17;MQ=32;FQ=186.017;PV4=1,0.000702671,1,0.32978 GT:PL 0/1:213,0,255
Scaffold_1 821031 . A G 187.009 PASS DP=314;VDB=3.69716e-25;SGB=-0.693147;RPB=0.761639;MQB=0.176979;MQSB=0.836921;BQB=0.00189174;MQ0F=0.159236;AF1=0.5;AC1=1;DP4=82,46,36,22;MQ=32;FQ=190.016;PV4=0.869738,2.26017e-05,1,1 GT:PL 0/1:217,0,255
Scaffold_1 821036 . T C 92.0077 PASS DP=327;VDB=6.72574e-11;SGB=-0.693146;RPB=0.815538;MQB=0.846899;MQSB=0.81651;BQB=0.118072;MQ0F=0.168196;AF1=0.5;AC1=1;DP4=102,41,27,17;MQ=31;FQ=95.0159;PV4=0.263364,0.00301705,1,0.340224 GT:PL 0/1:122,0,255
Scaffold_1 821040 . A T 225.009 PASS DP=337;VDB=5.21744e-21;SGB=-0.693147;RPB=0.978451;MQB=0.0902867;MQSB=0.774142;BQB=0.00843697;MQ0F=0.178042;AF1=0.5;AC1=1;DP4=68,40,57,23;MQ=31;FQ=225.007;PV4=0.274994,0.000201936,1,1 GT:PL 0/1:255,0,255
Scaffold_1 821051 . T C 186.009 PASS DP=367;VDB=1.86492e-18;SGB=-0.693147;RPB=0.932401;MQB=0.994458;MQSB=0.766281;BQB=0.318212;MQ0F=0.185286;AF1=0.5;AC1=1;DP4=100,39,42,22;MQ=31;FQ=189.016;PV4=0.410931,0.0550614,1,1 GT:PL 0/1:216,0,255
Scaffold_1 821053 . C T 225.009 PASS DP=367;VDB=5.86987e-19;SGB=-0.693147;RPB=0.54315;MQB=0.0639797;MQSB=0.371568;BQB=0.866889;MQ0F=0.185286;AF1=0.5;AC1=1;DP4=78,37,71,18;MQ=31;FQ=225.007;PV4=0.0588241,0.181169,1,1 GT:PL 0/1:255,0,255
Scaffold_1 821054 . A C 225.009 PASS DP=370;VDB=3.09932e-19;SGB=-0.693147;RPB=0.872394;MQB=0.0363127;MQSB=0.907911;BQB=2.2113e-05;MQ0F=0.183784;AF1=0.5;AC1=1;DP4=93,49,41,24;MQ=31;FQ=225.007;PV4=0.755695,1.42361e-07,1,1 GT:PL 0/1:255,0,255
Scaffold_1 821060 . A C 225.009 PASS DP=384;VDB=3.67872e-16;SGB=-0.693147;RPB=0.148779;MQB=0.467595;MQSB=0.631446;BQB=0.532558;MQ0F=0.182292;AF1=0.5;AC1=1;DP4=85,39,61,28;MQ=30;FQ=225.007;PV4=1,1,0.179944,1 GT:PL 0/1:255,0,255
Scaffold_1 821068 . G A 221.999 PASS DP=395;VDB=5.08693e-30;SGB=-0.693147;RPB=0.834198;MQB=0.493614;MQSB=0.90556;BQB=9.33039e-05;MQ0F=0.189873;AF1=1;AC1=2;DP4=16,17,135,56;MQ=31;FQ=-84.9864;PV4=0.0157682,1,0.15118,1 GT:PL 1/1:255,58,0
Scaffold_1 821135 . T A 84.0076 PASS DP=257;VDB=9.24825e-06;SGB=-0.693021;RPB=0.866532;MQB=0.0825358;MQSB=0.269541;BQB=0.000754663;MQ0F=0.0817121;AF1=0.5;AC1=1;DP4=59,61,11,16;MQ=35;FQ=87.0157;PV4=0.523823,0.000101936,1,1 GT:PL 0/1:114,0,255
Scaffold_1 821149 . T C 18.0749 PASS DP=78;VDB=0.00218208;SGB=-0.662043;RPB=0.964062;MQB=0.896555;MQSB=0.926207;BQB=0.00121214;MQ0F=0.0769231;AF1=0.499996;AC1=1;DP4=6,13,7,2;MQ=31;FQ=21.0492;PV4=0.0418219,3.15869e-05,1,1 GT:PL 0/1:48,0,208
Scaffold_1 821164 . T C 154.178 PASS DP=61;VDB=1.45814e-05;SGB=-0.693143;RPB=0.256292;MQB=0.370626;MQSB=0.696542;BQB=0.999919;MQ0F=0.131148;AF1=0.520679;AC1=1;DP4=3,7,7,31;MQ=23;FQ=-16.0937;PV4=0.414319,1,1,0.396575 GT:PL 0/1:184,0,11
Scaffold_1 821173 . A C 139.143 PASS DP=48;VDB=6.62405e-06;SGB=-0.693097;RPB=0.126537;MQB=0.270683;MQSB=0.429557;BQB=0.889758;MQ0F=0.166667;AF1=0.516288;AC1=1;DP4=3,6,6,24;MQ=23;FQ=-15.1212;PV4=0.405587,0.397483,1,0.215334 GT:PL 0/1:169,0,12
Scaffold_1 821181 . G A 136.013 PASS DP=37;VDB=0.000102845;SGB=-0.692562;RPB=0.57939;MQB=0.131823;MQSB=0.975798;BQB=0.979435;MQ0F=0.189189;AF1=1;AC1=2;DP4=1,6,3,19;MQ=23;FQ=-29.9901;PV4=1,1,1,1 GT:PL 1/1:166,3,0
Scaffold_1 821208 . C A 40.0076 PASS DP=19;VDB=5.07289e-06;SGB=-0.670168;RPB=0.0104291;MQB=0.620251;MQSB=0.9375;BQB=0.206192;MQ0F=0.421053;AF1=0.50002;AC1=1;DP4=2,6,0,10;MQ=19;FQ=14.1786;PV4=0.183007,1,1,1 GT:PL 0/1:70,0,41
Scaffold_1 821525 . C T 34.0138 PASS DP=8;VDB=0.124686;SGB=-0.556411;RPB=1;MQB=0.25;MQSB=0.75;BQB=1;MQ0F=0.25;AF1=1;AC1=2;DP4=1,1,1,3;MQ=21;FQ=-29.9901;PV4=1,0.44176,1,1 GT:PL 1/1:64,3,0
Scaffold_1 821585 . C A 18.0749 PASS DP=31;VDB=0.0165938;SGB=-0.590765;RPB=0.129808;MQB=0.525971;MQSB=0.995153;BQB=0.76088;MQ0F=0.387097;AF1=0.499996;AC1=1;DP4=10,3,3,2;MQ=22;FQ=21.0464;PV4=0.58275,1,1,1 GT:PL 0/1:48,0,80
Scaffold_1 821598 . A C 27.0155 PASS DP=29;VDB=0.459448;SGB=-0.556411;RPB=0.974685;MQB=0.0516564;MQSB=0.940006;BQB=0.284674;MQ0F=0.344828;AF1=0.500003;AC1=1;DP4=7,6,4,0;MQ=23;FQ=21.4075;PV4=0.237395,1,1,0.439625 GT:PL 0/1:57,0,49
Scaffold_1 821620 . C T 19.0617 PASS DP=18;VDB=0.0618664;SGB=-0.511536;RPB=0.829029;MQB=0.594025;MQSB=0.475476;BQB=1;MQ0F=0.5;AF1=0.500076;AC1=1;DP4=4,4,2,1;MQ=22;FQ=8.50565;PV4=1,1,1,0.46125 GT:PL 0/1:49,0,35
Scaffold_1 822423 . C T 174.009 PASS DP=39;VDB=5.09497e-07;SGB=-0.676189;RPB=0.999461;MQB=0.536296;MQSB=0.799136;BQB=0.999461;MQ0F=0.102564;AF1=0.5;AC1=1;DP4=9,2,6,5;MQ=38;FQ=141.015;PV4=0.361455,1,1,1 GT:PL 0/1:204,0,168
Scaffold_1 822428 . G T 52.0072 PASS DP=41;VDB=0.233642;SGB=-0.590765;RPB=0.344132;MQB=0.361428;MQSB=0.843932;BQB=0.932573;MQ0F=0.097561;AF1=0.5;AC1=1;DP4=14,6,3,2;MQ=40;FQ=55.0154;PV4=1,0.190991,1,1 GT:PL 0/1:82,0,255
Scaffold_1 822442 . A C 21.0411 PASS DP=47;VDB=0.00120872;SGB=-0.616816;RPB=0.181428;MQB=0.854926;MQSB=0.705296;BQB=0.0112624;MQ0F=0.0851064;AF1=0.499998;AC1=1;DP4=13,9,3,3;MQ=39;FQ=24.0321;PV4=1,0.000935132,1,1 GT:PL 0/1:51,0,255
Scaffold_1 822501 . A G 225.422 PASS DP=86;VDB=0.00133343;SGB=-0.693144;RPB=0.995736;MQB=0.913541;MQSB=0.998308;BQB=0.72901;MQ0F=0.0930233;AF1=0.555409;AC1=1;DP4=3,2,32,7;MQ=43;FQ=-20.029;PV4=0.267158,1,0.352677,0.166157 GT:PL 0/1:255,0,7
Scaffold_1 822508 . C T 70.0074 PASS DP=89;VDB=0.0530329;SGB=-0.616816;RPB=0.540698;MQB=0.177605;MQSB=0.999904;BQB=0.790907;MQ0F=0.134831;AF1=0.5;AC1=1;DP4=33,7,4,2;MQ=41;FQ=73.0156;PV4=0.581173,0.13077,1,1 GT:PL 0/1:100,0,255
Scaffold_1 822518 . A T 127.008 PASS DP=88;VDB=0.154586;SGB=-0.670168;RPB=0.992845;MQB=0.879841;MQSB=0.951197;BQB=0.261526;MQ0F=0.113636;AF1=0.5;AC1=1;DP4=25,11,6,4;MQ=42;FQ=130.016;PV4=0.706488,0.0275378,1,1 GT:PL 0/1:157,0,255
Scaffold_1 822545 . G A 104.008 PASS DP=74;VDB=0.113645;SGB=-0.670168;RPB=0.838536;MQB=0.914935;MQSB=0.865098;BQB=0.0916073;MQ0F=0.135135;AF1=0.5;AC1=1;DP4=19,11,5,5;MQ=40;FQ=107.016;PV4=0.48236,0.00167908,1,0.358653 GT:PL 0/1:134,0,255
Scaffold_1 822567 . A G 225.009 PASS DP=45;VDB=1.36257e-06;SGB=-0.691153;RPB=0.10274;MQB=0.945959;MQSB=0.97979;BQB=0.800737;MQ0F=0.111111;AF1=0.5;AC1=1;DP4=3,3,9,9;MQ=40;FQ=70.0155;PV4=1,1,0.419061,1 GT:PL 0/1:255,0,97
Scaffold_1 822573 . T A 16.1143 PASS DP=36;VDB=0.0331786;SGB=-0.556411;RPB=0.59811;MQB=0.810158;MQSB=0.987064;BQB=0.810158;MQ0F=0.138889;AF1=0.499994;AC1=1;DP4=13,6,2,2;MQ=41;FQ=19.069;PV4=0.588933,1,0.199585,1 GT:PL 0/1:46,0,255
Scaffold_1 822600 . G A 14.176 PASS DP=13;VDB=0.56;SGB=-0.453602;RPB=0.416667;MQB=0.583333;MQSB=0.750668;BQB=0.416667;MQ0F=0;AF1=0.49999;AC1=1;DP4=3,3,0,2;MQ=40;FQ=17.1004;PV4=0.464286,0.124415,1,1 GT:PL 0/1:44,0,133
Scaffold_1 938338 . G T 19.061 PASS DP=10;VDB=0.02;SGB=-0.453602;RPB=0;MQB=1;MQSB=0.974597;BQB=0.857143;MQ0F=0;AF1=0.499997;AC1=1;DP4=3,4,2,0;MQ=60;FQ=22.0421;PV4=0.444444,1,1,0.0813734 GT:PL 0/1:49,0,202
Scaffold_1 939163 . C T 39.0076 PASS DP=10;VDB=0.325692;SGB=-0.556411;RPB=0.487298;MQB=0.89338;MQSB=1;BQB=0.162433;MQ0F=0;AF1=0.5;AC1=1;DP4=4,1,4,0;MQ=57;FQ=42.0155;PV4=1,0.0660994,0.146176,0.436508 GT:PL 0/1:69,0,162
Scaffold_1 939179 . A T 46.0072 PASS DP=11;VDB=0.0941127;SGB=-0.511536;RPB=0.346719;MQB=0.809011;MQSB=0.809011;BQB=0.924584;MQ0F=0;AF1=0.5;AC1=1;DP4=3,3,3,0;MQ=59;FQ=49.0153;PV4=0.464286,1,0.0852353,0.427916 GT:PL 0/1:76,0,160
Scaffold_1 939229 . G C 87.0076 PASS DP=12;VDB=0.102049;SGB=-0.590765;RPB=0.838008;MQB=0.838008;MQSB=0.94394;BQB=0.6821;MQ0F=0;AF1=0.5;AC1=1;DP4=3,4,5,0;MQ=59;FQ=90.0158;PV4=0.0808081,1,0.127491,1 GT:PL 0/1:117,0,183
Scaffold_1 939233 . A G 80.0075 PASS DP=13;VDB=0.106137;SGB=-0.590765;RPB=0.679965;MQB=0.84246;MQSB=0.953497;BQB=0.876998;MQ0F=0;AF1=0.5;AC1=1;DP4=4,4,5,0;MQ=59;FQ=83.0157;PV4=0.104895,1,0.109944,1 GT:PL 0/1:110,0,203
Scaffold_1 939240 . A C 78.0075 PASS DP=14;VDB=0.104078;SGB=-0.590765;RPB=0.679965;MQB=0.84246;MQSB=0.968368;BQB=0.958048;MQ0F=0;AF1=0.5;AC1=1;DP4=5,3,5,0;MQ=59;FQ=81.0157;PV4=0.230769,0.260526,0.109944,1 GT:PL 0/1:108,0,207
Scaffold_1 939298 . G T 64.0073 PASS DP=13;VDB=0.807489;SGB=-0.556411;RPB=0.742584;MQB=0.381255;MQSB=0.961166;BQB=0.826565;MQ0F=0;AF1=0.5;AC1=1;DP4=4,5,3,1;MQ=59;FQ=67.0155;PV4=0.559441,0.273815,0.0252406,0.480975 GT:PL 0/1:94,0,226
Scaffold_1 939308 . A T 55.0072 PASS DP=13;VDB=0.905887;SGB=-0.511536;RPB=0.829029;MQB=0.263597;MQSB=0.950952;BQB=0.655816;MQ0F=0;AF1=0.5;AC1=1;DP4=3,5,2,1;MQ=59;FQ=58.0154;PV4=0.545455,1,0.0133259,0.356869 GT:PL 0/1:85,0,192
Scaffold_1 939319 . G A 53.0072 PASS DP=14;VDB=0.995789;SGB=-0.556411;RPB=0.826565;MQB=0.114218;MQSB=0.920266;BQB=0.742584;MQ0F=0;AF1=0.5;AC1=1;DP4=4,5,2,2;MQ=58;FQ=56.0154;PV4=1,0.162687,0.00464482,0.0750916 GT:PL 0/1:83,0,218
Scaffold_1 939328 . T C 34.0087 PASS DP=12;VDB=0.17915;SGB=-0.511536;RPB=0.382304;MQB=0.25042;MQSB=0.793923;BQB=0.933909;MQ0F=0;AF1=0.5;AC1=1;DP4=4,5,0,3;MQ=59;FQ=37.016;PV4=0.490909,1,0.0167142,1 GT:PL 0/1:64,0,218
Scaffold_1 939330 . G C 16.1143 PASS DP=12;VDB=0.32;SGB=-0.453602;RPB=0.625;MQB=0.5;MQSB=0.916482;BQB=0.625;MQ0F=0;AF1=0.499994;AC1=1;DP4=3,5,0,2;MQ=60;FQ=19.069;PV4=1,1,0.0176326,1 GT:PL 0/1:46,0,210
Scaffold_1 939358 . C A 120.008 PASS DP=13;VDB=0.168702;SGB=-0.616816;RPB=0.112477;MQB=0.623736;MQSB=0.695312;BQB=0.961166;MQ0F=0;AF1=0.5;AC1=1;DP4=4,3,2,4;MQ=59;FQ=123.002;PV4=0.592075,1,0.10902,0.0834503 GT:PL 0/1:150,0,175
Scaffold_1 939364 . G A 133.008 PASS DP=13;VDB=0.168702;SGB=-0.616816;RPB=0.112477;MQB=0.623736;MQSB=0.695312;BQB=0.828239;MQ0F=0;AF1=0.5;AC1=1;DP4=4,3,2,4;MQ=59;FQ=136.013;PV4=0.592075,0.229551,0.10902,0.453491 GT:PL 0/1:163,0,194
Scaffold_1 939375 . G C 136.008 PASS DP=17;VDB=0.211175;SGB=-0.636426;RPB=0.92664;MQB=0.621145;MQSB=0.79189;BQB=0.958048;MQ0F=0;AF1=0.5;AC1=1;DP4=5,5,2,5;MQ=59;FQ=139.016;PV4=0.622069,1,0.084257,1 GT:PL 0/1:166,0,235
Scaffold_1 939421 . G A 129.008 PASS DP=15;VDB=0.211175;SGB=-0.636426;RPB=0.511891;MQB=0.651439;MQSB=0.778801;BQB=0.581345;MQ0F=0;AF1=0.5;AC1=1;DP4=4,4,2,5;MQ=59;FQ=132.016;PV4=0.608392,0.0970952,0.111025,0.219138 GT:PL 0/1:159,0,210
Scaffold_1 939445 . T G 109.008 PASS DP=13;VDB=0.0769344;SGB=-0.616816;RPB=0.470358;MQB=0.899815;MQSB=0.899815;BQB=0.531709;MQ0F=0;AF1=0.5;AC1=1;DP4=4,3,2,4;MQ=59;FQ=112.016;PV4=0.592075,0.100867,0.149845,0.322532 GT:PL 0/1:139,0,188
Scaffold_1 939452 . C A 79.0075 PASS DP=15;VDB=0.104078;SGB=-0.590765;RPB=0.41985;MQB=0.935229;MQSB=0.899815;BQB=0.547344;MQ0F=0;AF1=0.5;AC1=1;DP4=5,3,2,3;MQ=59;FQ=82.0157;PV4=0.592075,0.0461806,1,1 GT:PL 0/1:109,0,208
Scaffold_1 939466 . G T 66.0074 PASS DP=14;VDB=0.530437;SGB=-0.590765;RPB=0.564628;MQB=0.950952;MQSB=0.950952;BQB=0.742931;MQ0F=0;AF1=0.5;AC1=1;DP4=4,2,2,3;MQ=56;FQ=69.0155;PV4=0.5671,0.1365,0.237722,0.322174 GT:PL 0/1:96,0,164
Scaffold_1 939583 . G C 42.0073 PASS DP=10;VDB=0.803107;SGB=-0.556411;RPB=0.62023;MQB=0.124046;MQSB=1;BQB=0.248092;MQ0F=0;AF1=0.5;AC1=1;DP4=1,3,0,4;MQ=45;FQ=45.011;PV4=1,1,0.0176661,1 GT:PL 0/1:72,0,102
Scaffold_1 939600 . A G 40.0075 PASS DP=9;VDB=0.0389723;SGB=-0.511536;RPB=0.300267;MQB=0.150134;BQB=0.900802;MQ0F=0;AF1=0.5;AC1=1;DP4=0,5,0,3;MQ=52;FQ=43.0152;PV4=1,1,0.000126668,1 GT:PL 0/1:70,0,113
Scaffold_1 939617 . T C 43.0073 PASS DP=7;VDB=0.0481132;SGB=-0.511536;RPB=0.405132;MQB=0.202566;BQB=0.810265;MQ0F=0;AF1=0.5;AC1=1;DP4=0,4,0,3;MQ=51;FQ=46.011;PV4=1,1,0.000555906,1 GT:PL 0/1:73,0,103
Scaffold_1 939639 . C T 101.008 PASS DP=11;VDB=0.631784;SGB=-0.590765;RPB=0.333321;MQB=0.0476173;MQSB=0.75;BQB=0.952347;MQ0F=0;AF1=0.5;AC1=1;DP4=0,5,2,3;MQ=51;FQ=92.6839;PV4=0.444444,0.31269,0.000122716,0.152787 GT:PL 0/1:131,0,120
Scaffold_1 939696 . A G 93.0077 PASS DP=6;VDB=0.472095;SGB=-0.556411;RPB=0.75;MQB=0;MQSB=1;BQB=0.875;MQ0F=0;AF1=0.500001;AC1=1;DP4=0,2,2,2;MQ=49;FQ=27.0236;PV4=0.466667,0.473915,0.000636482,1 GT:PL 0/1:123,0,54
Scaffold_1 940243 . T G 42.0087 PASS DP=4;VDB=0.32;SGB=-0.453602;RPB=1;MQB=1;MQSB=1;BQB=1;MQ0F=0;AF1=0.500158;AC1=1;DP4=0,1,1,1;MQ=48;FQ=6.20419;PV4=1,1,0.0444119,0.333333 GT:PL 0/1:72,0,32
Scaffold_1 940251 . T G 42.0087 PASS DP=4;VDB=0.28;SGB=-0.453602;RPB=1;MQB=1;MQSB=1;BQB=1;MQ0F=0;AF1=0.500158;AC1=1;DP4=0,1,1,1;MQ=48;FQ=6.20419;PV4=1,1,0.0444119,0.333333 GT:PL 0/1:72,0,32
Scaffold_1 940269 . A T 27.0155 PASS DP=4;VDB=0.32;SGB=-0.453602;RPB=1;MQB=0;MQSB=1;BQB=1;MQ0F=0;AF1=0.500003;AC1=1;DP4=0,2,1,1;MQ=52;FQ=20.5385;PV4=1,1,0.00325501,1 GT:PL 0/1:57,0,48
Scaffold_1 940275 . G A 39.0076 PASS DP=4;VDB=0.32;SGB=-0.453602;RPB=1;MQB=0;MQSB=1;BQB=1;MQ0F=0;AF1=0.5;AC1=1;DP4=0,2,1,1;MQ=52;FQ=35.0432;PV4=1,1,0.00325501,1 GT:PL 0/1:69,0,63
Scaffold_1 940290 . T C 50.0072 PASS DP=5;VDB=0.470313;SGB=-0.511536;RPB=0.333333;MQB=0;MQSB=0.833333;BQB=0.5;MQ0F=0;AF1=0.5;AC1=1;DP4=1,1,1,2;MQ=52;FQ=35.9304;PV4=1,0.189109,0.0242456,1 GT:PL 0/1:80,0,63
Scaffold_1 940300 . C A 67.0074 PASS DP=5;VDB=0.490096;SGB=-0.511536;RPB=0.333333;MQB=0;MQSB=0.833333;BQB=0.666667;MQ0F=0;AF1=0.5;AC1=1;DP4=1,1,1,2;MQ=52;FQ=40.0112;PV4=1,0.247513,0.0242456,1 GT:PL 0/1:97,0,67
Scaffold_1 940301 . C A 36.0081 PASS DP=5;VDB=0.28;SGB=-0.453602;RPB=0;MQB=0;MQSB=0.75;BQB=0.5;MQ0F=0;AF1=0.5;AC1=1;DP4=1,1,1,1;MQ=52;FQ=37.5605;PV4=1,0.211325,0.00325501,1 GT:PL 0/1:66,0,70
Scaffold_1 940305 . G A 63.0073 PASS DP=5;VDB=0.470313;SGB=-0.511536;RPB=0.333333;MQB=0;MQSB=0.833333;BQB=1;MQ0F=0;AF1=0.5;AC1=1;DP4=1,1,1,2;MQ=52;FQ=36.0118;PV4=1,0.412556,0.0242456,1 GT:PL 0/1:93,0,63
Scaffold_1 940334 . C T 23.0285 PASS DP=6;VDB=0.52;SGB=-0.453602;RPB=0.333333;MQB=0;MQSB=1;BQB=0.333333;MQ0F=0;AF1=0.499999;AC1=1;DP4=1,2,0,2;MQ=55;FQ=26.0257;PV4=1,0.109551,0.0260228,1 GT:PL 0/1:53,0,98
Scaffold_1 940359 . T C 18.0749 PASS DP=5;VDB=0.56;SGB=-0.453602;RPB=0.333333;MQB=0;MQSB=1;BQB=0.833333;MQ0F=0;AF1=0.499996;AC1=1;DP4=1,2,0,2;MQ=55;FQ=21.049;PV4=1,0.243929,0.0260228,0.136114 GT:PL 0/1:48,0,94
Scaffold_1 940361 . T C 26.0177 PASS DP=5;VDB=0.56;SGB=-0.453602;RPB=0.333333;MQB=0;MQSB=1;BQB=0.5;MQ0F=0;AF1=0.499999;AC1=1;DP4=1,2,0,2;MQ=55;FQ=29.0204;PV4=1,0.136114,0.0260228,0.136114 GT:PL 0/1:56,0,102
Scaffold_1 940362 . T G 30.0112 PASS DP=5;VDB=0.56;SGB=-0.453602;RPB=0.333333;MQB=0;MQSB=1;BQB=0.666667;MQ0F=0;AF1=0.5;AC1=1;DP4=1,2,0,2;MQ=55;FQ=33.0165;PV4=1,1,0.0260228,0.136114 GT:PL 0/1:60,0,98
Scaffold_1 940365 . G A 30.0112 PASS DP=5;VDB=0.56;SGB=-0.453602;RPB=0.333333;MQB=0;MQSB=1;BQB=0.666667;MQ0F=0;AF1=0.5;AC1=1;DP4=1,2,0,2;MQ=55;FQ=33.0165;PV4=1,1,0.0260228,0.186007 GT:PL 0/1:60,0,98
Scaffold_1 940404 . T C 18.0749 PASS DP=5;VDB=0.9;SGB=-0.453602;RPB=1;MQB=0;MQSB=1;BQB=0;MQ0F=0;AF1=0.499996;AC1=1;DP4=1,1,0,2;MQ=54;FQ=21.0488;PV4=1,0.143877,0.0724069,0.211325 GT:PL 0/1:48,0,89
Scaffold_1 940427 . A G 26.0177 PASS DP=7;VDB=0.5;SGB=-0.453602;RPB=0;MQB=0;MQSB=0.75;BQB=0.75;MQ0F=0;AF1=0.499999;AC1=1;DP4=1,1,1,1;MQ=51;FQ=28.9662;PV4=1,0.272545,0.000328407,1 GT:PL 0/1:56,0,75
Scaffold_1 940441 . C T 13.2188 PASS DP=5;VDB=0.1;SGB=-0.453602;RPB=0;MQB=0;MQSB=1;BQB=0.75;MQ0F=0;AF1=0.499991;AC1=1;DP4=0,2,1,1;MQ=48;FQ=14.9623;PV4=1,1,0.0688836,1 GT:PL 0/1:43,0,48
Scaffold_1 940446 . C G 45.0072 PASS DP=6;VDB=0.267404;SGB=-0.511536;RPB=0.861511;MQB=0.28717;MQSB=0.75;BQB=0.574341;MQ0F=0;AF1=0.5;AC1=1;DP4=1,2,1,2;MQ=49;FQ=47.6834;PV4=1,1,0.0163592,1 GT:PL 0/1:75,0,86
Scaffold_1 940492 . C T 28.0137 PASS DP=8;VDB=0.301053;SGB=-0.511536;RPB=0.405132;MQB=0.202566;MQSB=0.607698;BQB=0.810265;MQ0F=0;AF1=0.5;AC1=1;DP4=3,1,1,2;MQ=51;FQ=31.0185;PV4=0.485714,0.142795,0.00611321,1 GT:PL 0/1:58,0,124
Scaffold_1 940501 . C G 57.0073 PASS DP=8;VDB=0.325692;SGB=-0.556411;RPB=0.62023;MQB=0.248092;MQSB=0.450401;BQB=0.868321;MQ0F=0;AF1=0.5;AC1=1;DP4=3,1,2,2;MQ=52;FQ=59.9811;PV4=1,1,0.0327385,0.177959 GT:PL 0/1:87,0,108
Scaffold_1 940529 . C T 33.0091 PASS DP=8;VDB=0.318564;SGB=-0.511536;RPB=0.750668;MQB=0.450401;MQSB=0.583333;BQB=0.600535;MQ0F=0;AF1=0.5;AC1=1;DP4=4,1,2,1;MQ=54;FQ=36.0162;PV4=1,1,0.0339566,1 GT:PL 0/1:63,0,124
Scaffold_1 940555 . T C 30.0112 PASS DP=7;VDB=0.318564;SGB=-0.511536;RPB=0.28717;MQB=0.574341;MQSB=1;BQB=0.861511;MQ0F=0;AF1=0.5;AC1=1;DP4=3,0,2,1;MQ=52;FQ=32.9829;PV4=1,0.389411,0.0899047,0.0843988 GT:PL 0/1:60,0,81
Scaffold_1 940564 . T C 33.0091 PASS DP=7;VDB=0.5;SGB=-0.453602;RPB=0;MQB=0.5;BQB=1;MQ0F=0;AF1=0.5;AC1=1;DP4=2,0,2,0;MQ=56;FQ=33.0069;PV4=1,1,0.211325,0.211325 GT:PL 0/1:63,0,63
Scaffold_1 940566 . A G 31.0104 PASS DP=7;VDB=0.5;SGB=-0.453602;RPB=0.166667;MQB=0.5;BQB=0.666667;MQ0F=0;AF1=0.5;AC1=1;DP4=3,0,2,0;MQ=57;FQ=33.9625;PV4=1,1,0.136114,0.136114 GT:PL 0/1:61,0,80
Scaffold_1 940720 . T A 54.0072 PASS DP=11;VDB=0.0983484;SGB=-0.511536;RPB=0.924584;MQB=0.115573;MQSB=0.785714;BQB=0.809011;MQ0F=0;AF1=0.5;AC1=1;DP4=5,1,2,1;MQ=54;FQ=57.0154;PV4=1,1,0,1 GT:PL 0/1:84,0,142
Scaffold_1 940721 . T C 46.0072 PASS DP=11;VDB=0.102722;SGB=-0.511536;RPB=0.924584;MQB=0.115573;MQSB=0.785714;BQB=0.924584;MQ0F=0;AF1=0.5;AC1=1;DP4=5,1,2,1;MQ=54;FQ=49.0153;PV4=1,0.362217,0,1 GT:PL 0/1:76,0,149
Scaffold_1 940729 . C G 55.0072 PASS DP=12;VDB=0.249971;SGB=-0.556411;RPB=0.643095;MQB=0.0401934;MQSB=0.979382;BQB=0.924449;MQ0F=0;AF1=0.5;AC1=1;DP4=5,2,3,1;MQ=52;FQ=58.0154;PV4=1,1,0.000899651,1 GT:PL 0/1:85,0,180
Scaffold_1 940738 . G C 57.0073 PASS DP=11;VDB=0.255054;SGB=-0.556411;RPB=0.783809;MQB=0.0559863;MQSB=0.9375;BQB=0.895781;MQ0F=0;AF1=0.5;AC1=1;DP4=5,1,3,1;MQ=51;FQ=60.0154;PV4=1,0.389525,0.00197529,1 GT:PL 0/1:87,0,151
Scaffold_1 940764 . A G 48.0072 PASS DP=13;VDB=0.0785113;SGB=-0.511536;RPB=0.290822;MQB=0.0443614;MQSB=0.962269;BQB=0.540433;MQ0F=0;AF1=0.5;AC1=1;DP4=7,2,2,1;MQ=56;FQ=51.0153;PV4=1,1,0,1 GT:PL 0/1:78,0,202
Scaffold_1 940795 . A T 42.0073 PASS DP=14;VDB=0.0714862;SGB=-0.511536;RPB=0.0782001;MQB=0.0368832;MQSB=0.99778;BQB=0.973096;MQ0F=0;AF1=0.5;AC1=1;DP4=7,4,2,1;MQ=56;FQ=45.0154;PV4=1,1,0,1 GT:PL 0/1:72,0,255
Scaffold_1 940889 . A G 66.0074 PASS DP=13;VDB=0.106137;SGB=-0.556411;RPB=0.174611;MQB=0.125315;MQSB=0.864013;BQB=0.793923;MQ0F=0;AF1=0.5;AC1=1;DP4=4,4,2,2;MQ=55;FQ=69.0155;PV4=1,1,0.00239827,1 GT:PL 0/1:96,0,218
Scaffold_1 940905 . T C 69.0074 PASS DP=13;VDB=0.216674;SGB=-0.590765;RPB=0.896474;MQB=0.253351;MQSB=0.996401;BQB=0.896474;MQ0F=0;AF1=0.5;AC1=1;DP4=2,5,2,3;MQ=55;FQ=72.0156;PV4=1,0.299578,0.0142083,1 GT:PL 0/1:99,0,171
Scaffold_1 940914 . G A 53.0072 PASS DP=14;VDB=0.118267;SGB=-0.556411;RPB=0.94394;MQB=0.125315;MQSB=0.935451;BQB=0.996401;MQ0F=0;AF1=0.5;AC1=1;DP4=3,5,2,2;MQ=55;FQ=56.0154;PV4=1,0.227771,0.00239827,1 GT:PL 0/1:83,0,211
Scaffold_1 940924 . A T 55.0072 PASS DP=14;VDB=0.303109;SGB=-0.556411;RPB=0.953497;MQB=0.381255;MQSB=0.989343;BQB=0.604728;MQ0F=0;AF1=0.5;AC1=1;DP4=3,6,2,2;MQ=57;FQ=58.0154;PV4=1,0.146782,0.0152553,1 GT:PL 0/1:85,0,230
Scaffold_1 940948 . C T 69.0074 PASS DP=12;VDB=0.314313;SGB=-0.556411;RPB=0.562708;MQB=0.442128;MQSB=0.924449;BQB=0.763675;MQ0F=0;AF1=0.5;AC1=1;DP4=2,5,2,2;MQ=56;FQ=72.0156;PV4=0.575758,1,0.029935,1 GT:PL 0/1:99,0,188
Scaffold_1 941070 . G T 131.008 PASS DP=12;VDB=0.241952;SGB=-0.616816;RPB=0.895781;MQB=0.111973;MQSB=0.761877;BQB=0.727822;MQ0F=0;AF1=0.5;AC1=1;DP4=1,3,4,2;MQ=53;FQ=90.0156;PV4=0.52381,0.120752,0.0100087,1 GT:PL 0/1:161,0,117
Scaffold_1 941086 . T A 145.008 PASS DP=12;VDB=0.221757;SGB=-0.636426;RPB=0.838008;MQB=0.0584657;MQSB=0.896474;BQB=0.95494;MQ0F=0;AF1=0.5;AC1=1;DP4=1,4,4,3;MQ=53;FQ=98.0158;PV4=0.292929,0.401224,0.0022585,1 GT:PL 0/1:175,0,125
Scaffold_1 941141 . A G 56.0072 PASS DP=13;VDB=0.166456;SGB=-0.511536;RPB=0.366593;MQB=0.0916482;MQSB=0.857112;BQB=0.733186;MQ0F=0;AF1=0.5;AC1=1;DP4=4,3,1,2;MQ=56;FQ=59.0154;PV4=1,1,0.00081459,1 GT:PL 0/1:86,0,185
Scaffold_1 941175 . C T 65.0073 PASS DP=12;VDB=0.994501;SGB=-0.590765;RPB=0.896474;MQB=0.0194886;MQSB=0.94394;BQB=0.331306;MQ0F=0;AF1=0.5;AC1=1;DP4=5,2,3,2;MQ=52;FQ=68.0155;PV4=1,0.059689,0.000336569,0.000462186 GT:PL 0/1:95,0,182
Scaffold_1 941219 . A T 33.0091 PASS DP=10;VDB=0.137328;SGB=-0.511536;RPB=0.150134;MQB=0.150134;MQSB=1;BQB=0.600535;MQ0F=0;AF1=0.5;AC1=1;DP4=4,1,2,1;MQ=51;FQ=36.0162;PV4=1,0.385516,0.00307797,1 GT:PL 0/1:63,0,153
Scaffold_1 941220 . C G 27.0155 PASS DP=11;VDB=0.137328;SGB=-0.511536;RPB=0.346719;MQB=0.115573;MQSB=0.924584;BQB=0.924584;MQ0F=0;AF1=0.499999;AC1=1;DP4=4,2,2,1;MQ=52;FQ=30.0194;PV4=1,0.385398,0.00123365,1 GT:PL 0/1:57,0,175
Scaffold_1 941233 . T C 27.0155 PASS DP=13;VDB=0.142856;SGB=-0.511536;RPB=0.641538;MQB=0.0916482;MQSB=0.875;BQB=0.916482;MQ0F=0;AF1=0.499999;AC1=1;DP4=6,1,2,1;MQ=53;FQ=30.0194;PV4=1,1,0.000497487,1 GT:PL 0/1:57,0,182
Scaffold_1 941234 . G A 24.0241 PASS DP=13;VDB=0.137328;SGB=-0.511536;RPB=0.916482;MQB=0.0916482;MQSB=0.916482;BQB=0.824834;MQ0F=0;AF1=0.499999;AC1=1;DP4=5,2,2,1;MQ=53;FQ=27.0236;PV4=1,0.385262,0.000497487,1 GT:PL 0/1:54,0,191
Scaffold_1 941235 . G A 15.1417 PASS DP=13;VDB=0.148533;SGB=-0.511536;RPB=0.900802;MQB=0.150134;MQSB=0.900802;BQB=0.750668;MQ0F=0;AF1=0.499992;AC1=1;DP4=3,2,2,1;MQ=51;FQ=18.0829;PV4=1,0.150953,0.00307797,1 GT:PL 0/1:45,0,171
Scaffold_1 941270 . G A 144.008 PASS DP=15;VDB=0.816179;SGB=-0.651104;RPB=0.898397;MQB=0.00524752;MQSB=0.972604;BQB=0.753577;MQ0F=0;AF1=0.5;AC1=1;DP4=4,3,5,3;MQ=52;FQ=146.685;PV4=1,0.174984,0.00231282,0.127408 GT:PL 0/1:174,0,185
Scaffold_1 941281 . G A 159.009 PASS DP=16;VDB=0.819334;SGB=-0.651104;RPB=1;MQB=0.00352788;MQSB=0.998531;BQB=0.915545;MQ0F=0;AF1=0.5;AC1=1;DP4=5,3,5,3;MQ=52;FQ=161.847;PV4=1,0.298587,0.00127118,1 GT:PL 0/1:189,0,203
Scaffold_1 941286 . T G 156.008 PASS DP=16;VDB=0.799892;SGB=-0.651104;RPB=0.998622;MQB=0.00352788;MQSB=0.998531;BQB=0.998622;MQ0F=0;AF1=0.5;AC1=1;DP4=5,3,5,3;MQ=52;FQ=158.804;PV4=1,0.407215,0.00127118,1 GT:PL 0/1:186,0,199
Scaffold_1 941299 . G T 176.009 PASS DP=18;VDB=0.846429;SGB=-0.662043;RPB=0.991266;MQB=0.00639249;MQSB=0.990815;BQB=0.39194;MQ0F=0;AF1=0.5;AC1=1;DP4=5,4,6,3;MQ=53;FQ=164.847;PV4=1,1,0.00201422,0.222832 GT:PL 0/1:206,0,192
Scaffold_1 941332 . C T 104.008 PASS DP=15;VDB=0.202927;SGB=-0.636426;RPB=0.546428;MQB=0.0211283;MQSB=1;BQB=0.00524752;MQ0F=0;AF1=0.5;AC1=1;DP4=5,3,5,2;MQ=55;FQ=107.016;PV4=1,1.97646e-08,0.000422999,1 GT:PL 0/1:134,0,206
Scaffold_1 941354 . C T 132.008 PASS DP=13;VDB=0.0239016;SGB=-0.616816;RPB=0.531709;MQB=0.0511259;MQSB=0.826565;BQB=0.961166;MQ0F=0;AF1=0.5;AC1=1;DP4=5,2,4,2;MQ=56;FQ=134.995;PV4=1,0.27577,0.00115422,1 GT:PL 0/1:162,0,185
Scaffold_1 941365 . T C 132.008 PASS DP=16;VDB=0.0286293;SGB=-0.616816;RPB=0.972604;MQB=0.0297292;MQSB=0.912219;BQB=0.209611;MQ0F=0;AF1=0.5;AC1=1;DP4=6,3,4,2;MQ=57;FQ=135.015;PV4=1,1,0.000286654,1 GT:PL 0/1:162,0,197
Scaffold_1 941399 . A G 122.008 PASS DP=19;VDB=0.996969;SGB=-0.651104;RPB=1;MQB=0.00794251;MQSB=1;BQB=0.800884;MQ0F=0;AF1=0.5;AC1=1;DP4=6,4,6,2;MQ=54;FQ=125.016;PV4=0.638009,0.220038,0.00111884,0.349296 GT:PL 0/1:152,0,232
Scaffold_1 941480 . G A 70.0074 PASS DP=17;VDB=0.0411825;SGB=-0.616816;RPB=0.723806;MQB=0.00408677;MQSB=0.958048;BQB=0.988701;MQ0F=0;AF1=0.5;AC1=1;DP4=6,5,4,2;MQ=52;FQ=73.0156;PV4=1,1,1.1665e-06,1 GT:PL 0/1:100,0,225
Scaffold_1 941483 . A G 64.0073 PASS DP=17;VDB=0.0782353;SGB=-0.590765;RPB=0.508203;MQB=0.00920968;MQSB=0.998265;BQB=0.992528;MQ0F=0;AF1=0.5;AC1=1;DP4=6,4,3,2;MQ=52;FQ=67.0155;PV4=1,1,4.23526e-06,1 GT:PL 0/1:94,0,232
Scaffold_1 941487 . C T 61.0073 PASS DP=18;VDB=0.0815962;SGB=-0.590765;RPB=0.730199;MQB=0.00780539;MQSB=0.986852;BQB=0.793727;MQ0F=0;AF1=0.5;AC1=1;DP4=7,4,3,2;MQ=53;FQ=64.0155;PV4=1,1,1.56231e-06,1 GT:PL 0/1:91,0,237
Scaffold_1 941489 . G A 78.0075 PASS DP=18;VDB=0.0411825;SGB=-0.616816;RPB=0.896149;MQB=0.00339922;MQSB=0.983729;BQB=0.995624;MQ0F=0;AF1=0.5;AC1=1;DP4=7,5,4,2;MQ=53;FQ=81.0157;PV4=1,1,4.35142e-07,1 GT:PL 0/1:108,0,255
Scaffold_1 941500 . T C 65.0073 PASS DP=19;VDB=0.0435222;SGB=-0.616816;RPB=0.984733;MQB=0.0028799;MQSB=0.996435;BQB=0.908324;MQ0F=0;AF1=0.5;AC1=1;DP4=8,5,4,2;MQ=53;FQ=68.0155;PV4=1,0.290411,1.62896e-07,1 GT:PL 0/1:95,0,255
Scaffold_1 941508 . G A 85.0076 PASS DP=17;VDB=0.0411825;SGB=-0.616816;RPB=0.922371;MQB=0.00408677;MQSB=0.951229;BQB=0.320984;MQ0F=0;AF1=0.5;AC1=1;DP4=8,3,4,2;MQ=52;FQ=88.0158;PV4=1,1,1.1665e-06,1 GT:PL 0/1:115,0,222
Scaffold_1 941536 . C A 138.008 PASS DP=19;VDB=0.965099;SGB=-0.662043;RPB=0.465738;MQB=0.00167033;MQSB=0.975928;BQB=0.324099;MQ0F=0;AF1=0.5;AC1=1;DP4=5,4,4,5;MQ=50;FQ=141.016;PV4=1,0.0525652,1.84412e-06,0.231315 GT:PL 0/1:168,0,217
Scaffold_1 941549 . G A 111.008 PASS DP=16;VDB=0.96029;SGB=-0.651104;RPB=0.915545;MQB=0.00352788;MQSB=0.571081;BQB=0.0208021;MQ0F=0;AF1=0.5;AC1=1;DP4=5,3,2,6;MQ=50;FQ=114.016;PV4=0.314685,0.0010584,2.05968e-08,0.01683 GT:PL 0/1:141,0,207
Scaffold_1 941553 . T C 123.008 PASS DP=16;VDB=0.981411;SGB=-0.636426;RPB=0.97357;MQB=0.00524752;MQSB=0.651439;BQB=0.993326;MQ0F=0;AF1=0.5;AC1=1;DP4=5,3,2,5;MQ=51;FQ=126.016;PV4=0.314685,0.424471,6.93242e-08,0.00477457 GT:PL 0/1:153,0,200
Scaffold_1 941554 . G A 116.008 PASS DP=16;VDB=0.956478;SGB=-0.616816;RPB=0.967216;MQB=0.00822975;MQSB=0.777382;BQB=0.902954;MQ0F=0;AF1=0.5;AC1=1;DP4=5,3,2,4;MQ=52;FQ=119.016;PV4=0.592075,1,2.7682e-07,0.0117066 GT:PL 0/1:146,0,206
Scaffold_1 941641 . A T 114.008 PASS DP=17;VDB=0.831613;SGB=-0.651104;RPB=0.97357;MQB=0.00524752;MQSB=0.384615;BQB=0.720273;MQ0F=0;AF1=0.5;AC1=1;DP4=2,5,0,8;MQ=51;FQ=117.016;PV4=0.2,0.132741,2.4179e-10,1 GT:PL 0/1:144,0,203
Scaffold_1 941709 . A T 41.0074 PASS DP=13;VDB=0.121629;SGB=-0.511536;RPB=0.994805;MQB=0.0497871;MQSB=1;BQB=0.979382;MQ0F=0;AF1=0.5;AC1=1;DP4=1,7,0,3;MQ=56;FQ=44.0154;PV4=1,0.496429,2.43116e-07,1 GT:PL 0/1:71,0,188
Scaffold_1 941713 . T A 34.0087 PASS DP=13;VDB=0.116687;SGB=-0.511536;RPB=0.983051;MQB=0.0443614;MQSB=1;BQB=0.995736;MQ0F=0;AF1=0.5;AC1=1;DP4=1,8,0,3;MQ=56;FQ=37.016;PV4=1,0.478507,4.607e-08,1 GT:PL 0/1:64,0,194
Scaffold_1 941737 . A C 33.0091 PASS DP=13;VDB=0.116687;SGB=-0.511536;RPB=0.877913;MQB=0.152558;MQSB=0.722222;BQB=1;MQ0F=0;AF1=0.5;AC1=1;DP4=2,6,0,3;MQ=54;FQ=36.0162;PV4=1,0.473581,0.00602556,1 GT:PL 0/1:63,0,194
Scaffold_1 941746 . G A 38.0077 PASS DP=9;VDB=0.126715;SGB=-0.511536;RPB=0.115573;MQB=0.346719;MQSB=1;BQB=0.924584;MQ0F=0;AF1=0.5;AC1=1;DP4=1,5,0,3;MQ=53;FQ=41.0155;PV4=1,0.341311,0.0192606,0.0198016 GT:PL 0/1:68,0,153
Scaffold_1 942006 . C A 15.1078 PASS DP=3;VDB=0.0532881;SGB=-0.511536;MQ0F=0;AF1=1;AC1=2;DP4=0,0,3,0;MQ=36;FQ=-35.987 GT:PL 1/1:47,9,0
Scaffold_1 942024 . T C 107.133 PASS DP=6;VDB=0.00595258;SGB=-0.616816;MQ0F=0;AF1=1;AC1=2;DP4=0,0,6,0;MQ=46;FQ=-44.9861 GT:PL 1/1:140,18,0
Scaffold_1 942025 . A T 109.133 PASS DP=6;VDB=0.00740154;SGB=-0.616816;MQ0F=0;AF1=1;AC1=2;DP4=0,0,6,0;MQ=46;FQ=-44.9861 GT:PL 1/1:142,18,0
Scaffold_1 942196 . C G 21.0411 PASS DP=8;VDB=0.36;SGB=-0.453602;RPB=0;MQB=0;MQSB=0.9;BQB=0.7;MQ0F=0;AF1=0.499998;AC1=1;DP4=3,2,2,0;MQ=52;FQ=24.0321;PV4=1,0.256655,0.0257041,1 GT:PL 0/1:51,0,155
Scaffold_1 942212 . A G 39.0076 PASS DP=12;VDB=0.192436;SGB=-0.511536;RPB=0.962269;MQB=0.290822;MQSB=0.896474;BQB=0.540433;MQ0F=0;AF1=0.5;AC1=1;DP4=4,5,3,0;MQ=56;FQ=42.0155;PV4=0.204545,1,0.0216409,1 GT:PL 0/1:69,0,217
Scaffold_1 942264 . A G 30.0112 PASS DP=12;VDB=0.166456;SGB=-0.511536;RPB=0.382304;MQB=0.25042;MQSB=0.6821;BQB=0.898672;MQ0F=0;AF1=0.5;AC1=1;DP4=4,5,3,0;MQ=57;FQ=33.0172;PV4=0.204545,1,0.00094574,1 GT:PL 0/1:60,0,211
Scaffold_1 942274 . G A 40.0075 PASS DP=12;VDB=0.185719;SGB=-0.511536;RPB=0.414697;MQB=0.263597;MQSB=0.683497;BQB=0.655816;MQ0F=0;AF1=0.5;AC1=1;DP4=3,5,3,0;MQ=57;FQ=43.0154;PV4=0.181818,1,0.00179933,1 GT:PL 0/1:70,0,195
Scaffold_1 942502 . C T 19.061 PASS DP=13;VDB=0.206307;SGB=-0.511536;RPB=0.995736;MQB=0.707404;MQSB=0.896474;BQB=0.180974;MQ0F=0;AF1=0.499997;AC1=1;DP4=5,4,0,3;MQ=60;FQ=22.0421;PV4=0.204545,0.0322803,0.0407767,1 GT:PL 0/1:49,0,227
Scaffold_1 942523 . G A 20.0499 PASS DP=14;VDB=0.206307;SGB=-0.511536;RPB=0.597928;MQB=0.879351;MQSB=0.695312;BQB=0.795669;MQ0F=0;AF1=0.499997;AC1=1;DP4=6,4,0,3;MQ=59;FQ=23.0366;PV4=0.192308,0.230036,1,1 GT:PL 0/1:50,0,224
Scaffold_1 942536 . A G 26.0177 PASS DP=15;VDB=0.206307;SGB=-0.511536;RPB=0.829029;MQB=0.716531;MQSB=0.8618;BQB=0.655816;MQ0F=0;AF1=0.499999;AC1=1;DP4=6,2,0,3;MQ=60;FQ=29.0205;PV4=0.0606061,0.151317,0.0519441,1 GT:PL 0/1:56,0,194
Scaffold_1 954945 . G T 28.0137 PASS DP=7;VDB=0.02;SGB=-0.453602;RPB=0.5;MQB=1;MQSB=1;BQB=0.5;MQ0F=0;AF1=0.5;AC1=1;DP4=1,3,0,2;MQ=60;FQ=31.0185;PV4=1,1,1,1 GT:PL 0/1:58,0,121
Scaffold_1 955223 . G T 60.0073 PASS DP=9;VDB=0.02;SGB=-0.453602;RPB=0;MQB=1;MQSB=1;BQB=0;MQ0F=0;AF1=0.5;AC1=1;DP4=3,2,2,0;MQ=60;FQ=63.0154;PV4=1,1,1,1 GT:PL 0/1:90,0,142
Scaffold_1 970961 . C A 15.1417 PASS DP=7;VDB=0.02;SGB=-0.453602;RPB=0.666667;MQB=1;MQSB=1;BQB=0.166667;MQ0F=0;AF1=0.499992;AC1=1;DP4=1,2,0,2;MQ=60;FQ=18.0829;PV4=1,0.0793155,1,1 GT:PL 0/1:45,0,98
Scaffold_1 975078 . C T 66.0074 PASS DP=13;VDB=0.00615453;SGB=-0.590765;RPB=0.148586;MQB=0.297172;MQSB=0.356607;BQB=0.891517;MQ0F=0;AF1=0.5;AC1=1;DP4=1,5,5,0;MQ=55;FQ=69.0154;PV4=0.0151515,1,0.0466699,0.32221 GT:PL 0/1:96,0,141
Scaffold_1 975117 . G A 129.008 PASS DP=19;VDB=0.0110579;SGB=-0.662043;RPB=0.457304;MQB=0.743567;MQSB=0.79189;BQB=0.928603;MQ0F=0;AF1=0.5;AC1=1;DP4=1,7,9,0;MQ=58;FQ=131.602;PV4=0.000411353,1,0.0959883,1 GT:PL 0/1:159,0,169
Scaffold_1 975167 . T G 114.008 PASS DP=20;VDB=0.0506918;SGB=-0.662043;RPB=0.260295;MQB=0.933674;MQSB=0.928571;BQB=0.476686;MQ0F=0;AF1=0.5;AC1=1;DP4=5,2,9,0;MQ=59;FQ=117.016;PV4=0.175,0.0715093,0.198169,1 GT:PL 0/1:144,0,189
Scaffold_1 975170 . A G 93.0077 PASS DP=19;VDB=0.0397095;SGB=-0.651104;RPB=0.339296;MQB=1;MQSB=1;BQB=0.639741;MQ0F=0;AF1=0.5;AC1=1;DP4=5,3,8,0;MQ=60;FQ=96.0159;PV4=0.2,0.115956,1,1 GT:PL 0/1:123,0,197
Scaffold_1 975184 . A G 115.008 PASS DP=18;VDB=0.0407425;SGB=-0.651104;RPB=0.444739;MQB=1;MQSB=1;BQB=0.941512;MQ0F=0;AF1=0.5;AC1=1;DP4=4,3,8,0;MQ=60;FQ=118.016;PV4=0.0769231,0.187545,1,1 GT:PL 0/1:145,0,188
Scaffold_1 975219 . C G 121.008 PASS DP=17;VDB=0.985938;SGB=-0.651104;RPB=0.989343;MQB=1;BQB=0.635922;MQ0F=0;AF1=0.5;AC1=1;DP4=5,0,8,0;MQ=60;FQ=98.005;PV4=1,0.147442,1,0.0593161 GT:PL 0/1:151,0,125
Scaffold_1 975243 . G A 147.008 PASS DP=18;VDB=0.420379;SGB=-0.662043;RPB=0.209611;MQB=1;MQSB=1;BQB=0.972604;MQ0F=0;AF1=0.5;AC1=1;DP4=5,1,8,1;MQ=60;FQ=125.999;PV4=1,0.138766,1,1 GT:PL 0/1:177,0,153
Scaffold_1 975278 . A G 176.009 PASS DP=14;VDB=0.146847;SGB=-0.651104;RPB=0.954207;MQB=1;MQSB=0.964642;BQB=1;MQ0F=0;AF1=0.5;AC1=1;DP4=2,1,5,3;MQ=60;FQ=43.0154;PV4=1,1,1,1 GT:PL 0/1:206,0,70
Scaffold_1 975299 . A T 225.009 PASS DP=18;VDB=0.433274;SGB=-0.686358;RPB=0.994377;MQB=1;MQSB=1;BQB=0.913725;MQ0F=0;AF1=0.5;AC1=1;DP4=2,2,7,7;MQ=60;FQ=61.0154;PV4=1,0.311421,1,0.446387 GT:PL 0/1:255,0,88
Scaffold_1 975331 . T A 225.009 PASS DP=20;VDB=0.163723;SGB=-0.676189;RPB=0.320984;MQB=1;MQSB=1;BQB=1;MQ0F=0;AF1=0.5;AC1=1;DP4=2,4,5,6;MQ=60;FQ=122.016;PV4=1,1,1,1 GT:PL 0/1:255,0,149
Scaffold_1 975336 . C T 225.009 PASS DP=20;VDB=0.242386;SGB=-0.676189;RPB=0.29719;MQB=1;MQSB=1;BQB=0.955563;MQ0F=0;AF1=0.5;AC1=1;DP4=2,4,6,5;MQ=60;FQ=122.016;PV4=0.61991,0.43563,1,1 GT:PL 0/1:255,0,149
Scaffold_1 975339 . C A 225.009 PASS DP=20;VDB=0.179012;SGB=-0.676189;RPB=0.320984;MQB=1;MQSB=1;BQB=0.194687;MQ0F=0;AF1=0.5;AC1=1;DP4=2,4,5,6;MQ=60;FQ=106.016;PV4=1,1,1,1 GT:PL 0/1:255,0,133
Scaffold_1 975418 . C T 167.009 PASS DP=18;VDB=0.508631;SGB=-0.670168;RPB=0.647137;MQB=1;MQSB=1;BQB=0.906029;MQ0F=0;AF1=0.5;AC1=1;DP4=4,4,1,9;MQ=60;FQ=167.478;PV4=0.117647,1,1,0.0763137 GT:PL 0/1:197,0,198
Scaffold_1 975432 . G T 147.008 PASS DP=21;VDB=0.755557;SGB=-0.651104;RPB=0.283536;MQB=1;MQSB=1;BQB=0.846482;MQ0F=0;AF1=0.5;AC1=1;DP4=4,5,2,6;MQ=60;FQ=150.003;PV4=0.61991,1,1,1 GT:PL 0/1:177,0,202
Scaffold_1 975461 . G C 105.008 PASS DP=21;VDB=0.64169;SGB=-0.616816;RPB=0.965977;MQB=1;MQSB=1;BQB=1;MQ0F=0;AF1=0.5;AC1=1;DP4=8,5,1,5;MQ=60;FQ=108.016;PV4=0.140867,1,1,1 GT:PL 0/1:135,0,255
Scaffold_1 975496 . C A 178.009 PASS DP=21;VDB=0.811748;SGB=-0.662043;RPB=0.979382;MQB=1;MQSB=1;BQB=0.76338;MQ0F=0;AF1=0.5;AC1=1;DP4=7,3,3,6;MQ=60;FQ=181.014;PV4=0.178895,0.242138,1,0.188986 GT:PL 0/1:208,0,239
Scaffold_1 975515 . T C 169.009 PASS DP=21;VDB=0.603537;SGB=-0.651104;RPB=0.959099;MQB=1;MQSB=1;BQB=0.918304;MQ0F=0;AF1=0.5;AC1=1;DP4=6,5,3,5;MQ=60;FQ=172.017;PV4=0.649917,0.345043,1,0.355956 GT:PL 0/1:199,0,255
Scaffold_1 975546 . A T 200.009 PASS DP=22;VDB=0.659505;SGB=-0.670168;RPB=0.740818;MQB=1;MQSB=1;BQB=0.818054;MQ0F=0;AF1=0.5;AC1=1;DP4=5,6,6,4;MQ=60;FQ=202.044;PV4=0.669921,1,1,0.0234325 GT:PL 0/1:230,0,236
Scaffold_1 975647 . C A 179.009 PASS DP=16;VDB=0.740326;SGB=-0.651104;RPB=0.898397;MQB=1;MQSB=1;BQB=0.651439;MQ0F=0;AF1=0.5;AC1=1;DP4=3,4,5,3;MQ=60;FQ=161.973;PV4=0.61927,0.40984,1,1 GT:PL 0/1:209,0,189
Scaffold_1 975667 . G T 199.009 PASS DP=18;VDB=0.89133;SGB=-0.676189;RPB=0.690645;MQB=1;MQSB=1;BQB=0.422203;MQ0F=0;AF1=0.5;AC1=1;DP4=5,2,6,5;MQ=60;FQ=146.016;PV4=0.637066,0.0390716,1,0.187832 GT:PL 0/1:229,0,173
Scaffold_1 975712 . A G 190.009 PASS DP=17;VDB=0.367755;SGB=-0.662043;RPB=0.797039;MQB=1;MQSB=1;BQB=0.457304;MQ0F=0;AF1=0.5;AC1=1;DP4=5,3,5,4;MQ=60;FQ=156.016;PV4=1,1,1,1 GT:PL 0/1:220,0,183
Scaffold_1 975779 . C G 148.008 PASS DP=16;VDB=0.271748;SGB=-0.636426;RPB=0.9986;MQB=1;MQSB=1;BQB=0.698693;MQ0F=0;AF1=0.5;AC1=1;DP4=5,4,4,3;MQ=60;FQ=151.016;PV4=1,1,1,1 GT:PL 0/1:178,0,216
Scaffold_1 975789 . T A 143.008 PASS DP=14;VDB=0.283845;SGB=-0.636426;RPB=0.714506;MQB=0.966012;MQSB=1;BQB=0.925999;MQ0F=0;AF1=0.5;AC1=1;DP4=5,2,4,3;MQ=60;FQ=130.881;PV4=1,1,1,1 GT:PL 0/1:173,0,158
Scaffold_1 975791 . A T 140.008 PASS DP=14;VDB=0.293058;SGB=-0.616816;RPB=0.777113;MQB=0.961166;MQSB=1;BQB=0.623736;MQ0F=0;AF1=0.5;AC1=1;DP4=5,2,3,3;MQ=60;FQ=141.823;PV4=0.592075,1,1,1 GT:PL 0/1:170,0,175
Scaffold_1 975841 . C A 13.2188 PASS DP=14;VDB=0.06;SGB=-0.453602;RPB=0.444444;MQB=1;MQSB=0.950952;BQB=0.666667;MQ0F=0;AF1=0.499987;AC1=1;DP4=5,4,0,2;MQ=60;FQ=16.1222;PV4=0.454545,1,1,1 GT:PL 0/1:43,0,230
Scaffold_1 975981 . C T 71.0074 PASS DP=12;VDB=0.658104;SGB=-0.556411;RPB=0.279932;MQB=1.00775;MQSB=1.00775;BQB=0.895781;MQ0F=0;AF1=0.5;AC1=1;DP4=4,2,2,2;MQ=60;FQ=74.0156;PV4=1,0.286787,1,1 GT:PL 0/1:101,0,159
Scaffold_1 976004 . G A 161.009 PASS DP=14;VDB=0.283405;SGB=-0.651104;RPB=0.301194;MQB=1;MQSB=1;BQB=0.967216;MQ0F=0;AF1=0.5;AC1=1;DP4=4,2,2,6;MQ=60;FQ=129.015;PV4=0.277389,0.37668,1,0.435336 GT:PL 0/1:191,0,156
Scaffold_1 976131 . A C 55.0072 PASS DP=17;VDB=0.0149992;SGB=-0.556411;RPB=0.0528036;MQB=1;MQSB=1;BQB=0.624635;MQ0F=0;AF1=0.5;AC1=1;DP4=8,4,0,4;MQ=60;FQ=58.0154;PV4=0.0769231,1,1,0.234064 GT:PL 0/1:85,0,255
Scaffold_1 976636 . T G 18.0749 PASS DP=9;VDB=0.78;SGB=-0.453602;RPB=0.714286;MQB=0.5;MQSB=0.809011;BQB=1;MQ0F=0;AF1=0.499996;AC1=1;DP4=4,3,2,0;MQ=58;FQ=21.0492;PV4=0.5,1,0.0261782,0.0261782 GT:PL 0/1:48,0,205
Scaffold_1 976643 . G A 16.1143 PASS DP=9;VDB=0.78;SGB=-0.453602;RPB=0.714286;MQB=0.5;MQSB=0.809011;BQB=0.5;MQ0F=0;AF1=0.499994;AC1=1;DP4=4,3,2,0;MQ=58;FQ=19.069;PV4=0.5,0.0261782,0.0261782,0.172699 GT:PL 0/1:46,0,205
Scaffold_1 976656 . T A 15.1417 PASS DP=10;VDB=0.78;SGB=-0.453602;RPB=0.875;MQB=0.5;MQSB=0.895781;BQB=0.875;MQ0F=0;AF1=0.499992;AC1=1;DP4=4,4,2,0;MQ=58;FQ=18.0829;PV4=0.466667,1,0.0176326,1 GT:PL 0/1:45,0,217
Scaffold_1 976672 . T G 12.272 PASS DP=9;VDB=0.78;SGB=-0.453602;RPB=1;MQB=0.5;MQSB=0.809011;BQB=0.928571;MQ0F=0;AF1=0.499984;AC1=1;DP4=4,3,2,0;MQ=58;FQ=15.1496;PV4=0.5,0.439308,0.0261782,1 GT:PL 0/1:42,0,186
Scaffold_1 976695 . G A 45.0072 PASS DP=10;VDB=0.692431;SGB=-0.556411;RPB=0.727822;MQB=1.00775;MQSB=0.952347;BQB=0.895781;MQ0F=0;AF1=0.5;AC1=1;DP4=2,4,3,1;MQ=60;FQ=48.0153;PV4=0.52381,0.221572,1,1 GT:PL 0/1:75,0,155
Scaffold_1 976705 . C A 62.0073 PASS DP=8;VDB=0.529687;SGB=-0.511536;RPB=0.810265;MQB=1.01283;MQSB=1.01283;BQB=0.405132;MQ0F=0;AF1=0.5;AC1=1;DP4=2,2,2,1;MQ=60;FQ=62.0051;PV4=1,1,1,0.436199 GT:PL 0/1:92,0,92
Scaffold_1 976739 . T C 59.0073 PASS DP=12;VDB=0.529687;SGB=-0.511536;RPB=0.594025;MQB=1;MQSB=0.950952;BQB=0.774755;MQ0F=0;AF1=0.5;AC1=1;DP4=4,4,2,1;MQ=60;FQ=62.0154;PV4=1,1,1,1 GT:PL 0/1:89,0,194
Scaffold_1 976743 . T G 75.0075 PASS DP=12;VDB=0.529687;SGB=-0.511536;RPB=0.809011;MQB=0.924584;MQSB=0.924584;BQB=0.809011;MQ0F=0;AF1=0.5;AC1=1;DP4=4,2,2,1;MQ=60;FQ=78.0156;PV4=1,1,1,1 GT:PL 0/1:105,0,165
Scaffold_1 976831 . T A 16.1143 PASS DP=13;VDB=0.58;SGB=-0.453602;RPB=1;MQB=1;MQSB=0.982603;BQB=0.6;MQ0F=0;AF1=0.499994;AC1=1;DP4=5,5,1,1;MQ=60;FQ=19.069;PV4=1,1,1,1 GT:PL 0/1:46,0,238
Scaffold_1 976838 . A C 16.1143 PASS DP=13;VDB=0.58;SGB=-0.453602;RPB=0.8;MQB=1;MQSB=0.95494;BQB=0.5;MQ0F=0;AF1=0.499994;AC1=1;DP4=6,4,1,1;MQ=60;FQ=19.069;PV4=1,1,1,1 GT:PL 0/1:46,0,222
Scaffold_1 976878 . C T 18.0749 PASS DP=10;VDB=0.68;SGB=-0.453602;RPB=0.875;MQB=1;MQSB=0.952347;BQB=0.75;MQ0F=0;AF1=0.499996;AC1=1;DP4=4,4,1,1;MQ=60;FQ=21.0492;PV4=1,0.272369,1,1 GT:PL 0/1:48,0,220
Scaffold_1 976898 . T A 14.176 PASS DP=10;VDB=0.64;SGB=-0.453602;RPB=0.875;MQB=1;MQSB=1.00775;BQB=0.25;MQ0F=0;AF1=0.49999;AC1=1;DP4=5,3,1,1;MQ=60;FQ=17.1004;PV4=1,0.128282,1,1 GT:PL 0/1:44,0,214
Scaffold_1 983627 . C A 18.0754 PASS DP=9;VDB=0.02;SGB=-0.453602;RPB=0.666667;MQB=0.666667;MQSB=1;BQB=0.5;MQ0F=0.111111;AF1=0.500046;AC1=1;DP4=2,1,2,0;MQ=36;FQ=10.1266;PV4=1,1,1,1 GT:PL 0/1:48,0,37
Scaffold_1 985032 . C T 19.18 PASS DP=19;VDB=0.844031;SGB=-0.616816;RPB=0.182684;MQB=0.266194;MQSB=0.697005;BQB=0.994135;MQ0F=0.842105;AF1=1;AC1=2;DP4=5,5,0,6;MQ=14;FQ=-27.9927;PV4=0.0934066,0.449073,1,0.0874045 GT:PL 1/1:48,1,0
Scaffold_1 988172 . C T 140.456 PASS DP=14;VDB=0.021254;SGB=-0.651104;RPB=0.0137638;MQB=0.0375813;MQSB=0.777113;BQB=0.908075;MQ0F=0.428571;AF1=1;AC1=2;DP4=3,2,3,5;MQ=38;FQ=-33.9875;PV4=0.592075,0.320827,1,1 GT:PL 1/1:172,7,0
Scaffold_1 989571 . C A 18.0405 PASS DP=3;VDB=0.0941126;SGB=-0.511536;MQ0F=0;AF1=1;AC1=2;DP4=0,0,3,0;MQ=34;FQ=-35.9869 GT:PL 1/1:50,9,0
Scaffold_1 989585 . C T 35.9731 PASS DP=3;VDB=0.0941127;SGB=-0.511536;MQ0F=0;AF1=1;AC1=2;DP4=0,0,3,0;MQ=34;FQ=-35.9869 GT:PL 1/1:68,9,0
Scaffold_1 989608 . C T 43.9722 PASS DP=3;VDB=0.0941127;SGB=-0.511536;MQ0F=0;AF1=1;AC1=2;DP4=0,0,3,0;MQ=34;FQ=-35.9869 GT:PL 1/1:76,9,0
Scaffold_1 989619 . G A 43.9722 PASS DP=3;VDB=0.0860477;SGB=-0.511536;MQ0F=0;AF1=1;AC1=2;DP4=0,0,3,0;MQ=34;FQ=-35.9869 GT:PL 1/1:76,9,0
Scaffold_1 998609 . G A 146.273 PASS DP=14;VDB=0.108254;SGB=-0.616816;RPB=0.783809;MQB=0.0559863;MQSB=0.279932;BQB=1.00775;MQ0F=0.0714286;AF1=0.533586;AC1=1;DP4=4,0,2,4;MQ=47;FQ=-18.0541;PV4=0.0761905,0.205812,1,1 GT:PL 0/1:176,0,9
Scaffold_1 998618 . G A 162.199 PASS DP=14;VDB=0.265509;SGB=-0.651104;RPB=0.979382;MQB=0.124514;MQSB=0.361741;BQB=0.472367;MQ0F=0.0714286;AF1=0.730437;AC1=1;DP4=3,0,4,4;MQ=48;FQ=-24.9994;PV4=0.236364,0.040684,1,1 GT:PL 0/1:191,0,2
Scaffold_1 998843 . C G 85.7651 PASS DP=9;VDB=0.911206;SGB=-0.616816;RPB=0.809011;MQB=0.115573;MQSB=0.649731;BQB=0.924584;MQ0F=0.111111;AF1=1;AC1=2;DP4=0,3,5,1;MQ=32;FQ=-32.988;PV4=0.047619,0.256965,1,0.242857 GT:PL 1/1:117,6,0
Scaffold_1 999046 . C T 60.5131 PASS DP=5;VDB=0.106137;SGB=-0.556411;MQSB=0.5;MQ0F=0;AF1=1;AC1=2;DP4=0,0,2,2;MQ=28;FQ=-38.9864 GT:PL 1/1:93,12,0
Scaffold_1 999130 . T C 85.1328 PASS DP=6;VDB=0.906964;SGB=-0.616816;MQSB=0.861511;MQ0F=0;AF1=1;AC1=2;DP4=0,0,3,3;MQ=28;FQ=-44.9861 GT:PL 1/1:118,18,0
Scaffold_1 999144 . T G 58.9723 PASS DP=4;VDB=0.868052;SGB=-0.511536;MQSB=1;MQ0F=0;AF1=1;AC1=2;DP4=0,0,1,2;MQ=36;FQ=-35.9869 GT:PL 1/1:91,9,0
Scaffold_1 999172 . T A 49.9722 PASS DP=3;VDB=0.392388;SGB=-0.511536;MQSB=1;MQ0F=0;AF1=1;AC1=2;DP4=0,0,1,2;MQ=49;FQ=-35.9869 GT:PL 1/1:82,9,0
Scaffold_1 999977 . A G 13.2188 PASS DP=10;VDB=0.230191;SGB=-0.556411;RPB=0.248092;MQB=0.62023;MQSB=0.124046;BQB=0.868321;MQ0F=0;AF1=0.499987;AC1=1;DP4=1,3,3,1;MQ=48;FQ=16.1222;PV4=0.485714,1,0.16906,1 GT:PL 0/1:43,0,114
Scaffold_1 1000051 . C T 14.176 PASS DP=10;VDB=0.121629;SGB=-0.511536;RPB=0.900802;MQB=0.150134;MQSB=0.248092;BQB=0.150134;MQ0F=0;AF1=0.49999;AC1=1;DP4=1,4,3,0;MQ=55;FQ=17.1004;PV4=0.142857,0.0205023,0.0723883,1 GT:PL 0/1:44,0,141
Scaffold_1 1000062 . T A 25.0205 PASS DP=10;VDB=0.14;SGB=-0.453602;RPB=0.4;MQB=0.4;MQSB=0.202566;BQB=1;MQ0F=0;AF1=0.499999;AC1=1;DP4=1,4,2,0;MQ=55;FQ=28.0219;PV4=0.142857,0.369434,1,1 GT:PL 0/1:55,0,116
Scaffold_1 1000065 . G T 16.1143 PASS DP=10;VDB=0.14;SGB=-0.453602;RPB=0.857143;MQB=0.285714;MQSB=0.162433;BQB=0.857143;MQ0F=0;AF1=0.499994;AC1=1;DP4=2,5,2,0;MQ=56;FQ=19.069;PV4=0.166667,0.386076,1,1 GT:PL 0/1:46,0,158
Scaffold_1 1000103 . T G 27.0155 PASS DP=8;VDB=0.851467;SGB=-0.511536;RPB=0.607698;MQB=0.202566;MQSB=1.01283;BQB=1.01283;MQ0F=0;AF1=0.499999;AC1=1;DP4=2,2,2,1;MQ=55;FQ=30.0194;PV4=1,0.269177,0.101687,0.142795 GT:PL 0/1:57,0,138
Scaffold_1 1000270 . G A 98.0078 PASS DP=17;VDB=0.832832;SGB=-0.636426;RPB=0.698693;MQB=0.0516335;MQSB=1;BQB=0.987474;MQ0F=0.117647;AF1=0.5;AC1=1;DP4=9,0,6,1;MQ=35;FQ=30.0194;PV4=0.4375,0.203318,1,1 GT:PL 0/1:128,0,57
Scaffold_1 1000292 . A G 57.0073 PASS DP=17;VDB=0.0530329;SGB=-0.616816;RPB=0.749585;MQB=0.490777;MQSB=0.357143;BQB=0.809155;MQ0F=0.117647;AF1=0.5;AC1=1;DP4=9,1,5,1;MQ=29;FQ=58.8221;PV4=1,1,1,1 GT:PL 0/1:87,0,92
Scaffold_1 1000298 . C T 10.42 PASS DP=20;VDB=0.583998;SGB=-0.590765;RPB=0.551431;MQB=0.925758;MQSB=0.162817;BQB=0.234906;MQ0F=0.1;AF1=0.499975;AC1=1;DP4=12,3,5,0;MQ=29;FQ=13.2265;PV4=0.539474,0.0228136,1,0.147908 GT:PL 0/1:40,0,140
Scaffold_1 1000316 . C T 82.0076 PASS DP=22;VDB=0.516656;SGB=-0.651104;RPB=0.997674;MQB=0.276292;MQSB=0.13288;BQB=0.393893;MQ0F=0.0909091;AF1=0.5;AC1=1;DP4=13,1,6,2;MQ=29;FQ=83.5603;PV4=0.527273,0.114025,1,0.422638 GT:PL 0/1:112,0,116
Scaffold_1 1000329 . G A 57.0073 PASS DP=26;VDB=0.155969;SGB=-0.616816;RPB=0.142938;MQB=0.142938;MQSB=0.102941;BQB=0.929717;MQ0F=0.0769231;AF1=0.5;AC1=1;DP4=18,1,4,2;MQ=28;FQ=60.0149;PV4=0.132609,1,1,1 GT:PL 0/1:87,0,126
Scaffold_1 1000379 . C T 29.0123 PASS DP=37;VDB=0.973337;SGB=-0.636426;RPB=0.363449;MQB=0.374189;MQSB=0.575956;BQB=0.999787;MQ0F=0.189189;AF1=0.5;AC1=1;DP4=24,4,5,2;MQ=23;FQ=32.0178;PV4=0.57616,1,1,0.422076 GT:PL 0/1:59,0,135
Scaffold_1 1000430 . G A 82.0076 PASS DP=39;VDB=0.540608;SGB=-0.683931;RPB=0.786907;MQB=0.0649459;MQSB=1;BQB=0.892501;MQ0F=0.307692;AF1=0.5;AC1=1;DP4=21,4,13,0;MQ=23;FQ=84.8033;PV4=0.277925,0.455205,1,0.11546 GT:PL 0/1:112,0,125
Scaffold_1 1000440 . G A 52.0072 PASS DP=38;VDB=0.0327914;SGB=-0.680642;RPB=0.996487;MQB=0.968824;MQSB=0.997154;BQB=0.93981;MQ0F=0.315789;AF1=0.5;AC1=1;DP4=21,3,11,1;MQ=23;FQ=55.0154;PV4=1,0.42504,1,1 GT:PL 0/1:82,0,153
Scaffold_1 1000479 . A G 104.008 PASS DP=33;VDB=0.441508;SGB=-0.662043;RPB=0.264034;MQB=0.00521655;MQSB=0.457833;BQB=0.926163;MQ0F=0.363636;AF1=0.5;AC1=1;DP4=18,4,7,2;MQ=28;FQ=87.9614;PV4=1,0.25608,1,0.469955 GT:PL 0/1:134,0,115
Scaffold_1 1000504 . C T 87.0076 PASS DP=28;VDB=0.436369;SGB=-0.636426;RPB=0.00479271;MQB=0.00288967;MQSB=0.237902;BQB=0.0871593;MQ0F=0.321429;AF1=0.5;AC1=1;DP4=14,4,4,3;MQ=30;FQ=83.8224;PV4=0.355365,0.0178339,1,1 GT:PL 0/1:117,0,112
Scaffold_1 1000627 . G A 67.0074 PASS DP=30;VDB=0.0455292;SGB=-0.636426;RPB=0.895309;MQB=0.36962;MQSB=0.267969;BQB=0.870979;MQ0F=0.1;AF1=0.5;AC1=1;DP4=4,16,1,6;MQ=30;FQ=70.0155;PV4=1,1,1,0.285779 GT:PL 0/1:97,0,177
Scaffold_1 1000735 . G A 98.0078 PASS DP=35;VDB=0.511505;SGB=-0.662043;RPB=0.164517;MQB=0.00439769;MQSB=0.00343255;BQB=0.563418;MQ0F=0.285714;AF1=0.5;AC1=1;DP4=2,22,5,4;MQ=26;FQ=93.2257;PV4=0.00862069,0.095377,1,0.160531 GT:PL 0/1:128,0,121
Scaffold_1 1000742 . G A 94.0077 PASS DP=37;VDB=0.161751;SGB=-0.676189;RPB=0.00666153;MQB=0.0739305;MQSB=0.000464322;BQB=0.687842;MQ0F=0.27027;AF1=0.5;AC1=1;DP4=2,21,6,5;MQ=25;FQ=94.0055;PV4=0.00686493,0.0782737,1,1 GT:PL 0/1:124,0,124
Scaffold_1 1000747 . C T 110.008 PASS DP=33;VDB=0.331028;SGB=-0.670168;RPB=0.0122267;MQB=0.0218952;MQSB=0.0113313;BQB=0.878858;MQ0F=0.30303;AF1=0.5;AC1=1;DP4=1,21,5,5;MQ=26;FQ=82.0122;PV4=0.00634965,0.0998308,1,1 GT:PL 0/1:140,0,109
Scaffold_1 1000957 . G A 131.264 PASS DP=5;VDB=0.489846;SGB=-0.590765;MQSB=1;MQ0F=0;AF1=1;AC1=2;DP4=0,0,1,4;MQ=59;FQ=-41.9862 GT:PL 1/1:164,15,0
Scaffold_1 1001507 . A G 17.0924 PASS DP=15;VDB=0.0550934;SGB=-0.556411;RPB=0.527292;MQB=1;MQSB=0.0653974;BQB=1;MQ0F=0;AF1=0.499995;AC1=1;DP4=7,3,4,0;MQ=37;FQ=20.058;PV4=0.505495,1,0.357235,1 GT:PL 0/1:47,0,154
Scaffold_1 1001524 . G A 62.0073 PASS DP=20;VDB=0.945612;SGB=-0.590765;RPB=0.539484;MQB=0.165122;MQSB=0.0588235;BQB=0.431711;MQ0F=0.05;AF1=0.5;AC1=1;DP4=14,0,3,2;MQ=30;FQ=48.9076;PV4=0.0584795,0.00956903,1,1 GT:PL 0/1:92,0,76
Scaffold_1 1001776 . T C 12.272 PASS DP=14;VDB=0.211317;SGB=-0.556411;RPB=0.612626;MQB=0.569783;MQSB=0.852144;BQB=0.997503;MQ0F=0.357143;AF1=0.499984;AC1=1;DP4=4,6,0,4;MQ=20;FQ=15.0969;PV4=0.250749,1,1,1 GT:PL 0/1:42,0,61
Scaffold_1 1001792 . C T 22.0341 PASS DP=17;VDB=0.377852;SGB=-0.616816;RPB=0.85832;MQB=0.425907;MQSB=0.998612;BQB=0.881383;MQ0F=0.411765;AF1=0.5;AC1=1;DP4=5,6,0,6;MQ=20;FQ=22.0319;PV4=0.102295,1,1,1 GT:PL 0/1:52,0,52
Scaffold_1 1002122 . A G 21.0582 PASS DP=9;VDB=0.446842;SGB=-0.556411;RPB=0.730948;MQB=0.487298;MQSB=0.649731;BQB=0.89338;MQ0F=0.333333;AF1=0.501992;AC1=1;DP4=2,3,3,1;MQ=18;FQ=-6.96508;PV4=0.52381,1,1,0.336378 GT:PL 0/1:51,0,21
Scaffold_1 1002346 . G A 11.3381 PASS DP=17;VDB=0.199299;SGB=-0.511536;RPB=0.0851108;MQB=0.334532;MQSB=0.960687;BQB=0.760518;MQ0F=0.0588235;AF1=0.49998;AC1=1;DP4=8,5,3,0;MQ=38;FQ=14.1838;PV4=0.508929,0.0202524,1,0.0713869 GT:PL 0/1:41,0,225
Scaffold_1 1002428 . T G 73.0074 PASS DP=18;VDB=0.5413;SGB=-0.616816;RPB=0.723806;MQB=0.998738;MQSB=0.731616;BQB=0.940006;MQ0F=0;AF1=0.5;AC1=1;DP4=11,0,1,5;MQ=35;FQ=75.9984;PV4=0.000969619,1,1,0.478694 GT:PL 0/1:103,0,127
Scaffold_1 1002463 . G A 67.0074 PASS DP=26;VDB=0.71872;SGB=-0.616816;RPB=0.476761;MQB=0.159215;MQSB=0.359628;BQB=0.970805;MQ0F=0.0769231;AF1=0.5;AC1=1;DP4=19,1,1,5;MQ=31;FQ=70.0155;PV4=0.000525561,1,1,1 GT:PL 0/1:97,0,145
Scaffold_1 1002553 . G A 49.0072 PASS DP=30;VDB=0.0943152;SGB=-0.636426;RPB=0.946608;MQB=0.488113;MQSB=0.0780817;BQB=0.910436;MQ0F=0.233333;AF1=0.5;AC1=1;DP4=14,8,3,4;MQ=26;FQ=52.0153;PV4=0.402858,0.353797,1,1 GT:PL 0/1:79,0,179
Scaffold_1 1002610 . A G 39.0076 PASS DP=22;VDB=0.0445763;SGB=-0.590765;RPB=0.211462;MQB=0.146877;MQSB=0.10795;BQB=0.524522;MQ0F=0.363636;AF1=0.5;AC1=1;DP4=9,8,1,4;MQ=25;FQ=42.0154;PV4=0.323308,1,1,0.183213 GT:PL 0/1:69,0,123
Scaffold_1 1002737 . G A 14.176 PASS DP=35;VDB=4.23045e-05;SGB=-0.662043;RPB=0.503037;MQB=0.880157;MQSB=0.986656;BQB=0.975589;MQ0F=0.257143;AF1=0.49999;AC1=1;DP4=17,7,2,7;MQ=24;FQ=17.1004;PV4=0.0191435,0.251267,0.440869,1 GT:PL 0/1:44,0,170
Scaffold_1 1002739 . G T 19.061 PASS DP=36;VDB=0.0171133;SGB=-0.616816;RPB=0.00723499;MQB=0.0600547;MQSB=0.961574;BQB=0.610255;MQ0F=0.25;AF1=0.499997;AC1=1;DP4=14,14,6,0;MQ=24;FQ=22.0421;PV4=0.0310528,1,1,1 GT:PL 0/1:49,0,152
Scaffold_1 1002765 . C T 12.272 PASS DP=46;VDB=0.00490645;SGB=-0.590765;RPB=0.00161476;MQB=0.00481265;MQSB=0.774721;BQB=0.0473214;MQ0F=0.26087;AF1=0.499984;AC1=1;DP4=19,17,5,0;MQ=23;FQ=15.1496;PV4=0.0649748,1,1,0.195262 GT:PL 0/1:42,0,148
Scaffold_1 1002826 . T C 149.008 PASS DP=41;VDB=0.0146931;SGB=-0.688148;RPB=0.123388;MQB=0.00732554;MQSB=0.937804;BQB=0.82911;MQ0F=0.365854;AF1=0.5;AC1=1;DP4=16,7,7,8;MQ=21;FQ=33.0172;PV4=0.190344,1,1,1 GT:PL 0/1:179,0,60
Scaffold_1 1002960 . G A 49.0072 PASS DP=34;VDB=0.717818;SGB=-0.662043;RPB=0.323249;MQB=0.53856;MQSB=0.0783091;BQB=0.69159;MQ0F=0.264706;AF1=0.5;AC1=1;DP4=10,15,4,5;MQ=22;FQ=52.0153;PV4=1,1,1,1 GT:PL 0/1:79,0,141
Scaffold_1 1002964 . T A 79.0075 PASS DP=37;VDB=0.251242;SGB=-0.676189;RPB=0.997087;MQB=0.206646;MQSB=0.129767;BQB=0.985342;MQ0F=0.27027;AF1=0.5;AC1=1;DP4=8,14,4,7;MQ=23;FQ=81.9884;PV4=1,1,1,1 GT:PL 0/1:109,0,131
Scaffold_1 1003255 . T C 27.0156 PASS DP=25;VDB=0.0168362;SGB=-0.651104;RPB=0.79702;MQB=0.370881;MQSB=0.983267;BQB=0.581657;MQ0F=0.36;AF1=0.500006;AC1=1;DP4=6,10,2,6;MQ=15;FQ=18.7414;PV4=0.667413,0.187641,1,1 GT:PL 0/1:57,0,46
Scaffold_1 1003495 . C T 19.0632 PASS DP=10;VDB=0.0433485;SGB=-0.511536;RPB=0.346719;MQB=0.577865;MQSB=0.857143;BQB=0.809011;MQ0F=0.3;AF1=0.500247;AC1=1;DP4=4,2,3,0;MQ=21;FQ=4.73801;PV4=0.5,0.32505,1,1 GT:PL 0/1:49,0,30
Scaffold_1 1003603 . C T 68.0074 PASS DP=30;VDB=0.41656;SGB=-0.662043;RPB=0.27685;MQB=0.544971;MQSB=0.619299;BQB=0.986161;MQ0F=0.3;AF1=0.5;AC1=1;DP4=13,0,5,4;MQ=22;FQ=34.0159;PV4=0.0172249,0.380852,1,0.199352 GT:PL 0/1:98,0,61
Scaffold_1 1003641 . G A 20.0499 PASS DP=32;VDB=0.469001;SGB=-0.616816;RPB=0.436419;MQB=0.782778;MQSB=0.384848;BQB=0.76729;MQ0F=0.21875;AF1=0.499997;AC1=1;DP4=12,10,3,3;MQ=25;FQ=23.0366;PV4=1,1,1,0.103187 GT:PL 0/1:50,0,163
Scaffold_1 1003644 . G A 203.085 PASS DP=33;VDB=0.0876005;SGB=-0.692562;RPB=0.334641;MQB=0.000653392;MQSB=0.782397;BQB=0.966484;MQ0F=0.242424;AF1=1;AC1=2;DP4=5,4,13,9;MQ=23;FQ=-46.986;PV4=1,1,1,1 GT:PL 1/1:236,20,0
Scaffold_1 1003666 . C T 28.0137 PASS DP=30;VDB=0.233931;SGB=-0.616816;RPB=0.165904;MQB=0.439056;MQSB=0.71158;BQB=0.798584;MQ0F=0.233333;AF1=0.5;AC1=1;DP4=11,10,2,4;MQ=26;FQ=31.0185;PV4=0.648309,1,1,0.449176 GT:PL 0/1:58,0,179
Scaffold_1 1003812 . G A 19.061 PASS DP=27;VDB=0.00650433;SGB=-0.636426;RPB=0.542132;MQB=0.27603;MQSB=0.915791;BQB=0.917505;MQ0F=0.296296;AF1=0.499997;AC1=1;DP4=11,9,0,7;MQ=20;FQ=22.042;PV4=0.0215781,0.109721,1,1 GT:PL 0/1:49,0,94
Scaffold_1 1003872 . G A 16.1143 PASS DP=28;VDB=0.361542;SGB=-0.616816;RPB=0.980983;MQB=0.652644;MQSB=0.993391;BQB=0.945136;MQ0F=0.214286;AF1=0.499994;AC1=1;DP4=13,9,0,6;MQ=21;FQ=19.069;PV4=0.0178399,1,1,0.213304 GT:PL 0/1:46,0,118
Scaffold_1 1003892 . C T 22.0341 PASS DP=31;VDB=0.318702;SGB=-0.651104;RPB=0.999725;MQB=0.502924;MQSB=0.7675;BQB=0.940016;MQ0F=0.16129;AF1=0.499998;AC1=1;DP4=8,14,6,2;MQ=22;FQ=25.0286;PV4=0.101027,0.224782,1,1 GT:PL 0/1:52,0,156
Scaffold_1 1003897 . C T 39.0076 PASS DP=30;VDB=0.738889;SGB=-0.662043;RPB=0.733638;MQB=0.227148;MQSB=0.287742;BQB=0.747752;MQ0F=0.133333;AF1=0.5;AC1=1;DP4=4,15,8,1;MQ=22;FQ=42.0154;PV4=0.00117853,0.462137,1,1 GT:PL 0/1:69,0,126
Scaffold_1 1003946 . G A 10.42 PASS DP=15;VDB=0.480199;SGB=-0.511536;RPB=0.460355;MQB=0.1098;MQSB=0.240074;BQB=0.823708;MQ0F=0.133333;AF1=0.499975;AC1=1;DP4=4,7,3,0;MQ=20;FQ=13.2134;PV4=0.192308,1,1,0.0732101 GT:PL 0/1:40,0,65
Scaffold_1 1004040 . A G 95.7892 PASS DP=10;VDB=0.488105;SGB=-0.662043;RPB=1;MQB=1;MQSB=0.559863;BQB=1;MQ0F=0.1;AF1=1;AC1=2;DP4=0,1,4,5;MQ=23;FQ=-36.9867;PV4=1,1,1,0.245537 GT:PL 1/1:128,10,0
Scaffold_1 1004100 . C T 31.0104 PASS DP=20;VDB=0.191363;SGB=-0.616816;RPB=0.051565;MQB=0.0644911;MQSB=0.447612;BQB=0.700989;MQ0F=0.25;AF1=0.500002;AC1=1;DP4=7,5,4,2;MQ=21;FQ=22.7063;PV4=1,0.183119,1,1 GT:PL 0/1:61,0,50
Scaffold_1 1004117 . T C 96.0077 PASS DP=21;VDB=0.181735;SGB=-0.670168;RPB=0.144941;MQB=0.250861;MQSB=0.236815;BQB=0.772706;MQ0F=0.190476;AF1=0.500001;AC1=1;DP4=5,5,7,3;MQ=23;FQ=29.0205;PV4=0.649917,1,1,1 GT:PL 0/1:126,0,56
Scaffold_1 1004382 . G A 48.0072 PASS DP=30;VDB=0.0205067;SGB=-0.636426;RPB=0.84341;MQB=0.633803;MQSB=0.967929;BQB=0.83016;MQ0F=0.0666667;AF1=0.5;AC1=1;DP4=14,7,2,5;MQ=33;FQ=51.0153;PV4=0.103084,1,1,1 GT:PL 0/1:78,0,230
Scaffold_1 1004409 . T C 12.272 PASS DP=35;VDB=0.0396801;SGB=-0.616816;RPB=0.740587;MQB=0.336953;MQSB=0.49212;BQB=0.859633;MQ0F=0.0571429;AF1=0.499984;AC1=1;DP4=15,10,2,4;MQ=34;FQ=15.1496;PV4=0.36967,1,1,1 GT:PL 0/1:42,0,254
Scaffold_1 1004420 . G A 52.0072 PASS DP=38;VDB=0.800317;SGB=-0.636426;RPB=0.296705;MQB=0.244355;MQSB=0.600009;BQB=0.135732;MQ0F=0.0526316;AF1=0.5;AC1=1;DP4=16,13,5,2;MQ=34;FQ=55.0154;PV4=0.673781,0.0416892,1,0.428597 GT:PL 0/1:82,0,255
Scaffold_1 1004431 . C T 135.008 PASS DP=41;VDB=0.303227;SGB=-0.683931;RPB=0.0889216;MQB=0.653093;MQSB=0.429062;BQB=0.284932;MQ0F=0.0487805;AF1=0.5;AC1=1;DP4=12,13,10,3;MQ=35;FQ=138.016;PV4=0.165025,0.0731526,1,1 GT:PL 0/1:165,0,255
Scaffold_1 1004433 . C T 41.0074 PASS DP=40;VDB=0.850373;SGB=-0.590765;RPB=0.958331;MQB=0.130529;MQSB=0.357299;BQB=0.710579;MQ0F=0.05;AF1=0.5;AC1=1;DP4=18,11,2,3;MQ=34;FQ=44.0154;PV4=0.627178,1,1,1 GT:PL 0/1:71,0,255
Scaffold_1 1004441 . C T 14.176 PASS DP=35;VDB=0.459448;SGB=-0.556411;RPB=0.968507;MQB=0.186002;MQSB=0.301123;BQB=0.9995;MQ0F=0.0571429;AF1=0.49999;AC1=1;DP4=14,11,1,3;MQ=34;FQ=17.1004;PV4=0.329502,0.389531,1,1 GT:PL 0/1:44,0,255
Scaffold_1 1004444 . C T 42.0073 PASS DP=35;VDB=0.74324;SGB=-0.590765;RPB=0.916588;MQB=0.127093;MQSB=0.471449;BQB=0.829149;MQ0F=0.0571429;AF1=0.5;AC1=1;DP4=15,10,1,4;MQ=34;FQ=45.0154;PV4=0.157088,1,1,1 GT:PL 0/1:72,0,255
Scaffold_1 1004453 . C T 21.0411 PASS DP=35;VDB=0.349195;SGB=-0.590765;RPB=0.998559;MQB=0.0442177;MQSB=0.924849;BQB=0.497541;MQ0F=0.0857143;AF1=0.499998;AC1=1;DP4=15,11,1,4;MQ=31;FQ=24.0321;PV4=0.171919,0.111943,1,1 GT:PL 0/1:51,0,245
Scaffold_1 1004461 . T C 47.0072 PASS DP=33;VDB=0.155969;SGB=-0.616816;RPB=0.951579;MQB=0.681836;MQSB=0.898944;BQB=0.819936;MQ0F=0.0606061;AF1=0.5;AC1=1;DP4=6,11,6,0;MQ=33;FQ=50.0153;PV4=0.01373,0.261708,1,0.40289 GT:PL 0/1:77,0,209
Scaffold_1 1004469 . G T 56.0072 PASS DP=18;VDB=0.446842;SGB=-0.556411;RPB=0.594978;MQB=0.140417;MQSB=0.989637;BQB=0.338465;MQ0F=0.0555556;AF1=0.5;AC1=1;DP4=7,6,1,3;MQ=34;FQ=59.0153;PV4=0.576471,1,1,0.0423305 GT:PL 0/1:86,0,134
Scaffold_1 1004481 . G A 13.2188 PASS DP=31;VDB=0.391905;SGB=-0.590765;RPB=0.976419;MQB=0.999513;MQSB=0.992587;BQB=0.976419;MQ0F=0.0967742;AF1=0.499987;AC1=1;DP4=9,13,3,2;MQ=30;FQ=16.1222;PV4=0.628019,0.285944,0.477224,1 GT:PL 0/1:43,0,252
Scaffold_1 1004486 . T C 166.009 PASS DP=31;VDB=0.0693247;SGB=-0.688148;RPB=1;MQB=0.881657;MQSB=0.976472;BQB=0.980899;MQ0F=0.0967742;AF1=0.5;AC1=1;DP4=7,7,7,8;MQ=30;FQ=161.227;PV4=1,0.470544,0.362619,1 GT:PL 0/1:196,0,189
Scaffold_1 1004496 . C G 20.0499 PASS DP=32;VDB=0.230191;SGB=-0.556411;RPB=0.175433;MQB=0.0804194;MQSB=0.783637;BQB=0.906649;MQ0F=0.0625;AF1=0.499997;AC1=1;DP4=13,12,2,2;MQ=30;FQ=23.0366;PV4=1,1,1,1 GT:PL 0/1:50,0,233
Scaffold_1 1004504 . G T 88.0076 PASS DP=31;VDB=0.478589;SGB=-0.651104;RPB=0.475494;MQB=0.629927;MQSB=0.999785;BQB=0.998901;MQ0F=0.0645161;AF1=0.5;AC1=1;DP4=10,12,5,3;MQ=31;FQ=91.0158;PV4=0.681659,0.354273,1,1 GT:PL 0/1:118,0,241
Scaffold_1 1004678 . C T 121.008 PASS DP=31;VDB=0.531513;SGB=-0.676189;RPB=0.0211761;MQB=0.0368832;MQSB=0.742584;BQB=0.896649;MQ0F=0.193548;AF1=0.5;AC1=1;DP4=7,8,5,6;MQ=32;FQ=61.0154;PV4=1,1,1,1 GT:PL 0/1:151,0,88
Scaffold_1 1004764 . T C 130.522 PASS DP=21;VDB=0.365321;SGB=-0.689466;RPB=0.206831;MQB=0.292093;MQSB=0.289474;BQB=0.846161;MQ0F=0.190476;AF1=0.571816;AC1=1;DP4=0,5,2,14;MQ=30;FQ=-21.0201;PV4=1,0.291279,1,1 GT:PL 0/1:160,0,6
Scaffold_1 1004787 . G C 128.008 PASS DP=27;VDB=0.71014;SGB=-0.680642;RPB=0.79189;MQB=0.000248443;MQSB=0.5;BQB=0.89813;MQ0F=0.148148;AF1=0.5;AC1=1;DP4=0,15,2,10;MQ=29;FQ=35.0165;PV4=0.188034,0.34289,1,0.0100832 GT:PL 0/1:158,0,62
Scaffold_1 1004791 . A T 118.008 PASS DP=28;VDB=0.382733;SGB=-0.651104;RPB=0.473827;MQB=0.00725321;MQSB=0.438464;BQB=0.0615797;MQ0F=0.142857;AF1=0.5;AC1=1;DP4=1,17,2,6;MQ=28;FQ=73.0155;PV4=0.215385,1,1,0.470242 GT:PL 0/1:148,0,100
Scaffold_1 1004842 . A G 138.008 PASS DP=36;VDB=0.916279;SGB=-0.670168;RPB=0.920826;MQB=0.000459848;MQSB=0.726689;BQB=0.677184;MQ0F=0.166667;AF1=0.5;AC1=1;DP4=5,21,3,7;MQ=27;FQ=124.908;PV4=0.657626,0.056658,1,0.00108762 GT:PL 0/1:168,0,152
Scaffold_1 1004870 . A T 84.0076 PASS DP=33;VDB=0.522441;SGB=-0.636426;RPB=0.0785689;MQB=0.0230524;MQSB=0.806104;BQB=0.749147;MQ0F=0.181818;AF1=0.5;AC1=1;DP4=5,18,3,4;MQ=24;FQ=86.9884;PV4=0.344604,1,1,1 GT:PL 0/1:114,0,136
Scaffold_1 1004871 . C T 62.0073 PASS DP=33;VDB=0.715177;SGB=-0.636426;RPB=0.706505;MQB=0.201577;MQSB=0.622897;BQB=0.989239;MQ0F=0.181818;AF1=0.5;AC1=1;DP4=6,17,3,4;MQ=23;FQ=65.0154;PV4=0.640159,1,1,0.199589 GT:PL 0/1:92,0,144
Scaffold_1 1004877 . C A 99.0078 PASS DP=33;VDB=0.742057;SGB=-0.662043;RPB=0.123458;MQB=0.0570069;MQSB=0.782845;BQB=0.841487;MQ0F=0.181818;AF1=0.5;AC1=1;DP4=5,17,3,6;MQ=25;FQ=101.226;PV4=0.659505,0.293994,1,1 GT:PL 0/1:129,0,136
Scaffold_1 1005043 . A G 32.0097 PASS DP=11;VDB=0.0422968;SGB=-0.556411;RPB=0.200967;MQB=0.763675;MQSB=0.655816;BQB=0.763675;MQ0F=0.181818;AF1=0.5;AC1=1;DP4=4,3,4,0;MQ=35;FQ=35.0165;PV4=0.236364,1,0.313271,0.193582 GT:PL 0/1:62,0,140
Scaffold_1 1005113 . G A 11.3381 PASS DP=17;VDB=0.131948;SGB=-0.511536;RPB=0.67781;MQB=0.382771;MQSB=0.50373;BQB=0.931063;MQ0F=0.235294;AF1=0.49998;AC1=1;DP4=7,7,3,0;MQ=27;FQ=14.1838;PV4=0.227941,1,1,1 GT:PL 0/1:41,0,134
Scaffold_1 1005119 . A G 72.0074 PASS DP=18;VDB=0.783783;SGB=-0.636426;RPB=0.994413;MQB=0.987474;MQSB=0.387989;BQB=1;MQ0F=0.222222;AF1=0.5;AC1=1;DP4=5,4,4,3;MQ=26;FQ=60.8459;PV4=1,1,1,0.442191 GT:PL 0/1:102,0,88
Scaffold_1 1005300 . G A 23.0285 PASS DP=17;VDB=0.529687;SGB=-0.511536;RPB=0.846482;MQB=0.252182;MQSB=0.367879;BQB=0.430095;MQ0F=0.352941;AF1=0.499999;AC1=1;DP4=5,7,1,2;MQ=25;FQ=26.025;PV4=1,1,1,0.0937451 GT:PL 0/1:53,0,90
Scaffold_1 1005352 . C T 49.0072 PASS DP=21;VDB=0.670308;SGB=-0.616816;RPB=0.528813;MQB=0.460355;MQSB=0.572438;BQB=0.927041;MQ0F=0.380952;AF1=0.5;AC1=1;DP4=8,7,2,4;MQ=26;FQ=52.0153;PV4=0.635117,0.470244,1,0.336102 GT:PL 0/1:79,0,129
Scaffold_1 1005359 . C T 38.0077 PASS DP=21;VDB=0.725151;SGB=-0.556411;RPB=0.995012;MQB=0.25634;MQSB=0.668089;BQB=0.859633;MQ0F=0.428571;AF1=0.5;AC1=1;DP4=7,8,2,2;MQ=27;FQ=41.0155;PV4=1,0.495726,1,1 GT:PL 0/1:68,0,132
Scaffold_1 1005398 . A C 80.0075 PASS DP=19;VDB=0.30506;SGB=-0.616816;RPB=0.183388;MQB=0.231656;MQSB=0.978919;BQB=0.984733;MQ0F=0.315789;AF1=0.5;AC1=1;DP4=5,8,3,3;MQ=28;FQ=82.6018;PV4=1,1,1,1 GT:PL 0/1:110,0,120
Scaffold_1 1005411 . C T 36.0081 PASS DP=19;VDB=0.180561;SGB=-0.556411;RPB=0.878264;MQB=0.823732;MQSB=0.430095;BQB=0.960728;MQ0F=0.210526;AF1=0.5;AC1=1;DP4=6,7,2,2;MQ=31;FQ=39.0157;PV4=1,0.341377,1,1 GT:PL 0/1:66,0,188
Scaffold_1 1005415 . G A 55.0072 PASS DP=21;VDB=0.444886;SGB=-0.590765;RPB=0.97357;MQB=0.785785;MQSB=0.360295;BQB=0.457915;MQ0F=0.190476;AF1=0.5;AC1=1;DP4=6,8,3,2;MQ=30;FQ=58.0154;PV4=0.628483,0.317725,1,1 GT:PL 0/1:85,0,178
Scaffold_1 1005485 . G A 47.0072 PASS DP=20;VDB=0.0674392;SGB=-0.616816;RPB=0.396127;MQB=0.418638;MQSB=0.571209;BQB=0.969852;MQ0F=0.2;AF1=0.5;AC1=1;DP4=6,8,4,2;MQ=28;FQ=50.0153;PV4=0.628483,0.367402,1,1 GT:PL 0/1:77,0,156
Scaffold_1 1005489 . G T 38.0077 PASS DP=20;VDB=0.651328;SGB=-0.616816;RPB=0.807846;MQB=0.988701;MQSB=0.743567;BQB=0.998738;MQ0F=0.2;AF1=0.5;AC1=1;DP4=6,5,2,4;MQ=27;FQ=41.0155;PV4=0.61991,0.467325,1,1 GT:PL 0/1:68,0,130
Scaffold_1 1005519 . G A 27.0155 PASS DP=15;VDB=0.0349627;SGB=-0.511536;RPB=0.597928;MQB=0.207008;MQSB=0.961166;BQB=0.996435;MQ0F=0.0666667;AF1=0.499999;AC1=1;DP4=4,6,3,0;MQ=31;FQ=30.0194;PV4=0.192308,1,1,1 GT:PL 0/1:57,0,128
Scaffold_1 1005526 . A G 57.0073 PASS DP=12;VDB=0.0949329;SGB=-0.556411;RPB=0.248092;MQB=0.248092;MQSB=1;BQB=0.868321;MQ0F=0.0833333;AF1=0.5;AC1=1;DP4=3,1,4,0;MQ=35;FQ=39.9724;PV4=1,0.35762,1,0.0669873 GT:PL 0/1:87,0,67
Scaffold_1 1005539 . G A 37.0079 PASS DP=12;VDB=0.585652;SGB=-0.556411;RPB=0.241161;MQB=0.924449;MQSB=0.924449;BQB=0.924449;MQ0F=0.0833333;AF1=0.5;AC1=1;DP4=5,2,2,2;MQ=35;FQ=40.0145;PV4=0.575758,0.272682,1,1 GT:PL 0/1:67,0,103
Scaffold_1 1005691 . G T 108.008 PASS DP=19;VDB=0.19611;SGB=-0.616816;RPB=0.00993427;MQB=0.00993427;MQSB=1;BQB=0.930476;MQ0F=0.157895;AF1=0.5;AC1=1;DP4=9,1,4,2;MQ=40;FQ=68.0153;PV4=0.517857,0.148991,1,1 GT:PL 0/1:138,0,95
Scaffold_1 1005774 . C T 33.0091 PASS DP=39;VDB=0.945084;SGB=-0.651104;RPB=0.770018;MQB=0.351563;MQSB=0.534216;BQB=0.498723;MQ0F=0.205128;AF1=0.5;AC1=1;DP4=17,11,6,2;MQ=26;FQ=36.0162;PV4=0.681973,0.103305,1,0.0624833 GT:PL 0/1:63,0,193
Scaffold_1 1005815 . G C 22.0341 PASS DP=49;VDB=0.122391;SGB=-0.636426;RPB=0.985276;MQB=0.176227;MQSB=0.806676;BQB=0.952147;MQ0F=0.163265;AF1=0.499998;AC1=1;DP4=26,12,2,5;MQ=27;FQ=25.0286;PV4=0.085701,1,1,1 GT:PL 0/1:52,0,225
Scaffold_1 1005876 . G A 16.1143 PASS DP=46;VDB=0.0191208;SGB=-0.636426;RPB=0.730137;MQB=0.517691;MQSB=0.239273;BQB=0.831497;MQ0F=0.173913;AF1=0.499994;AC1=1;DP4=23,12,2,5;MQ=30;FQ=19.069;PV4=0.0988181,1,1,1 GT:PL 0/1:46,0,244
Scaffold_1 1005879 . C A 12.272 PASS DP=46;VDB=0.0459681;SGB=-0.616816;RPB=0.706662;MQB=0.345312;MQSB=0.377763;BQB=0.970146;MQ0F=0.173913;AF1=0.499984;AC1=1;DP4=22,12,1,5;MQ=31;FQ=15.1496;PV4=0.0666028,0.375613,1,1 GT:PL 0/1:42,0,250
Scaffold_1 1005925 . C G 194.009 PASS DP=24;VDB=0.0002816;SGB=-0.676189;RPB=0.962374;MQB=0.00292691;MQSB=0.251407;BQB=0.171729;MQ0F=0.0833333;AF1=0.5;AC1=1;DP4=8,4,4,7;MQ=32;FQ=66.0155;PV4=0.220347,1,1,1 GT:PL 0/1:224,0,93
Scaffold_1 1005988 . C T 20.0499 PASS DP=25;VDB=0.0103531;SGB=-0.556411;RPB=0.956996;MQB=0.780407;MQSB=0.975685;BQB=0.494951;MQ0F=0.08;AF1=0.499997;AC1=1;DP4=7,14,3,1;MQ=35;FQ=23.0366;PV4=0.266798,1,1,1 GT:PL 0/1:50,0,236
Scaffold_1 1005996 . C T 91.0077 PASS DP=26;VDB=0.0205067;SGB=-0.636426;RPB=0.464455;MQB=0.03101;MQSB=0.898155;BQB=0.615982;MQ0F=0.0769231;AF1=0.5;AC1=1;DP4=8,9,3,4;MQ=34;FQ=94.0158;PV4=1,0.206011,1,1 GT:PL 0/1:121,0,187
Scaffold_1 1005999 . T C 23.0285 PASS DP=27;VDB=0.00992398;SGB=-0.556411;RPB=0.953134;MQB=0.649209;MQSB=0.67032;BQB=0.99925;MQ0F=0.111111;AF1=0.499999;AC1=1;DP4=6,14,3,1;MQ=33;FQ=26.0258;PV4=0.130435,1,1,1 GT:PL 0/1:53,0,212
Scaffold_1 1006024 . G A 150.008 PASS DP=30;VDB=0.00243628;SGB=-0.676189;RPB=0.190745;MQB=0.206799;MQSB=0.667617;BQB=0.83186;MQ0F=0.1;AF1=0.5;AC1=1;DP4=7,11,4,7;MQ=32;FQ=152.226;PV4=1,1,1,1 GT:PL 0/1:180,0,187
Scaffold_1 1006029 . C T 70.0074 PASS DP=31;VDB=0.00418132;SGB=-0.651104;RPB=0.992587;MQB=0.976181;MQSB=0.531612;BQB=0.989343;MQ0F=0.0967742;AF1=0.5;AC1=1;DP4=7,14,3,5;MQ=33;FQ=73.0156;PV4=1,1,0.329794,1 GT:PL 0/1:100,0,250
Scaffold_1 1006035 . T A 115.008 PASS DP=32;VDB=0.128485;SGB=-0.651104;RPB=0.312996;MQB=0.00830978;MQSB=0.599643;BQB=0.99315;MQ0F=0.09375;AF1=0.5;AC1=1;DP4=8,14,3,5;MQ=31;FQ=118.016;PV4=1,0.298435,1,0.426946 GT:PL 0/1:145,0,195
Scaffold_1 1006043 . G A 162.009 PASS DP=33;VDB=0.204138;SGB=-0.676189;RPB=0.623472;MQB=0.00832355;MQSB=0.749711;BQB=0.827705;MQ0F=0.0909091;AF1=0.5;AC1=1;DP4=7,14,5,6;MQ=32;FQ=154.603;PV4=0.702596,0.131255,1,0.0500114 GT:PL 0/1:192,0,182
Scaffold_1 1006062 . G A 160.009 PASS DP=36;VDB=0.39524;SGB=-0.676189;RPB=0.858596;MQB=0.0153685;MQSB=0.592468;BQB=0.599043;MQ0F=0.138889;AF1=0.5;AC1=1;DP4=9,14,6,5;MQ=31;FQ=162.378;PV4=0.474805,0.0698205,1,1 GT:PL 0/1:190,0,198
Scaffold_1 1006086 . C T 110.008 PASS DP=38;VDB=0.832119;SGB=-0.662043;RPB=0.785914;MQB=0.0905003;MQSB=0.710095;BQB=0.908377;MQ0F=0.105263;AF1=0.5;AC1=1;DP4=11,16,3,6;MQ=30;FQ=113.016;PV4=1,0.420229,1,0.292995 GT:PL 0/1:140,0,227
Scaffold_1 1006110 . C T 59.0073 PASS DP=33;VDB=0.690812;SGB=-0.662043;RPB=0.787312;MQB=0.79863;MQSB=0.511054;BQB=0.998026;MQ0F=0.121212;AF1=0.5;AC1=1;DP4=9,14,1,8;MQ=28;FQ=62.0154;PV4=0.210013,1,1,0.494876 GT:PL 0/1:89,0,227
Scaffold_1 1006259 . G A 24.0241 PASS DP=19;VDB=0.0423326;SGB=-0.651104;RPB=0.82234;MQB=0.846482;MQSB=0.119735;BQB=0.0694835;MQ0F=0.157895;AF1=0.500003;AC1=1;DP4=2,7,4,4;MQ=21;FQ=20.0845;PV4=0.334842,1,1,0.151836 GT:PL 0/1:54,0,48
Scaffold_1 1006442 . A G 162.194 PASS DP=15;VDB=0.252521;SGB=-0.676189;RPB=0.356561;MQB=0.0330712;MQSB=0.499352;BQB=0.658617;MQ0F=0.0666667;AF1=1;AC1=2;DP4=1,3,8,3;MQ=31;FQ=-34.9872;PV4=0.235165,0.160341,1,1 GT:PL 1/1:194,8,0
Scaffold_1 1006456 . C T 172.274 PASS DP=14;VDB=0.446641;SGB=-0.670168;RPB=0.699673;MQB=0.177538;MQSB=0.958048;BQB=1;MQ0F=0;AF1=0.533586;AC1=1;DP4=1,2,7,3;MQ=33;FQ=-18.0541;PV4=0.51049,0.378752,1,1 GT:PL 0/1:202,0,9
Scaffold_1 1006519 . T C 162.009 PASS DP=20;VDB=0.580613;SGB=-0.680642;RPB=0.447727;MQB=0.177538;MQSB=0.41781;BQB=0.85994;MQ0F=0.05;AF1=0.5;AC1=1;DP4=2,5,9,3;MQ=33;FQ=32.0178;PV4=0.0739462,0.233252,1,1 GT:PL 0/1:192,0,59
Scaffold_1 1006683 . T C 224.543 PASS DP=17;VDB=0.444277;SGB=-0.680642;RPB=0.0959671;MQB=0.0959671;MQSB=0.0891522;BQB=0.809825;MQ0F=0;AF1=1;AC1=2;DP4=0,3,7,5;MQ=46;FQ=-30.9892;PV4=0.2,0.184423,1,0.470404 GT:PL 1/1:255,4,0
Scaffold_1 1009894 . G T 16.1143 PASS DP=10;VDB=0.02;SGB=-0.453602;RPB=0.25;MQB=1;MQSB=0.952347;BQB=0.75;MQ0F=0;AF1=0.499994;AC1=1;DP4=5,3,0,2;MQ=60;FQ=19.069;PV4=0.444444,1,1,1 GT:PL 0/1:46,0,215
Scaffold_1 1020576 . G A 11.3381 PASS DP=6;VDB=0.36;SGB=-0.453602;RPB=0;MQB=0.75;MQSB=0;BQB=0.625;MQ0F=0;AF1=0.49998;AC1=1;DP4=2,2,0,2;MQ=44;FQ=14.1838;PV4=0.466667,0.17086,0.36376,1 GT:PL 0/1:41,0,121
Scaffold_1 1021722 . A T 22.0341 PASS DP=9;VDB=0.0714862;SGB=-0.511536;RPB=0.300267;MQB=0.150134;MQSB=0.248092;BQB=0.600535;MQ0F=0;AF1=0.499998;AC1=1;DP4=1,4,3,0;MQ=51;FQ=25.0286;PV4=0.142857,1,0.000615317,0.109972 GT:PL 0/1:52,0,126
Scaffold_1 1021734 . C A 22.0341 PASS DP=10;VDB=0.0649539;SGB=-0.511536;RPB=0.300267;MQB=0.150134;MQSB=0.248092;BQB=0.900802;MQ0F=0;AF1=0.499998;AC1=1;DP4=1,4,3,0;MQ=51;FQ=25.0286;PV4=0.142857,0.181366,0.000615317,1 GT:PL 0/1:52,0,140
Scaffold_1 1021775 . G T 14.176 PASS DP=11;VDB=0.0588947;SGB=-0.511536;RPB=0.594025;MQB=0.0803926;MQSB=0.564628;BQB=0.594025;MQ0F=0;AF1=0.49999;AC1=1;DP4=2,6,3,0;MQ=51;FQ=17.1004;PV4=0.0606061,0.106972,0.00097496,1 GT:PL 0/1:44,0,197
Scaffold_1 1021776 . G T 17.0924 PASS DP=11;VDB=0.0649539;SGB=-0.511536;RPB=0.733186;MQB=0.0916482;MQSB=0.523791;BQB=0.916482;MQ0F=0;AF1=0.499995;AC1=1;DP4=2,5,3,0;MQ=51;FQ=20.058;PV4=0.166667,0.344208,0.00189793,1 GT:PL 0/1:47,0,184
Scaffold_1 1021778 . C T 10.42 PASS DP=11;VDB=0.0588947;SGB=-0.511536;RPB=0.594025;MQB=0.0803926;MQSB=0.564628;BQB=0.774755;MQ0F=0;AF1=0.499975;AC1=1;DP4=2,6,3,0;MQ=51;FQ=13.2265;PV4=0.0606061,0.411824,0.00097496,1 GT:PL 0/1:40,0,192
Scaffold_1 1023964 . C A 32.0097 PASS DP=14;VDB=0.121629;SGB=-0.511536;RPB=0.693041;MQB=1;MQSB=1;BQB=0.973096;MQ0F=0;AF1=0.5;AC1=1;DP4=5,6,0,3;MQ=60;FQ=35.0165;PV4=0.258242,1,1,1 GT:PL 0/1:62,0,255
Scaffold_1 1024461 . T G 19.061 PASS DP=12;VDB=0.251321;SGB=-0.511536;RPB=0.962269;MQB=0.0443614;MQSB=0.7;BQB=0.857404;MQ0F=0;AF1=0.499997;AC1=1;DP4=7,2,3,0;MQ=55;FQ=22.0421;PV4=1,1,4.81606e-05,1 GT:PL 0/1:49,0,212
Scaffold_1 1024487 . C A 19.061 PASS DP=12;VDB=0.251321;SGB=-0.511536;RPB=0.707404;MQB=0.0443614;MQSB=0.594978;BQB=0.962269;MQ0F=0;AF1=0.499997;AC1=1;DP4=5,4,3,0;MQ=55;FQ=22.0421;PV4=0.490909,1,4.81606e-05,1 GT:PL 0/1:49,0,235
Scaffold_1 1024498 . G T 19.061 PASS DP=12;VDB=0.251321;SGB=-0.511536;RPB=0.707404;MQB=0.0443614;MQSB=0.594978;BQB=0.962269;MQ0F=0;AF1=0.499997;AC1=1;DP4=5,4,3,0;MQ=55;FQ=22.0421;PV4=0.490909,1,4.81606e-05,1 GT:PL 0/1:49,0,229
Scaffold_1 1024502 . C T 17.0924 PASS DP=12;VDB=0.251321;SGB=-0.511536;RPB=0.707404;MQB=0.0443614;MQSB=0.594978;BQB=0.898672;MQ0F=0;AF1=0.499995;AC1=1;DP4=5,4,3,0;MQ=55;FQ=20.058;PV4=0.490909,0.432706,4.81606e-05,1 GT:PL 0/1:47,0,237
Scaffold_1 1024572 . C A 27.0155 PASS DP=10;VDB=0.681436;SGB=-0.511536;RPB=0.641538;MQB=0.0916482;MQSB=0.625;BQB=0.733186;MQ0F=0;AF1=0.499999;AC1=1;DP4=1,6,1,2;MQ=53;FQ=30.0194;PV4=1,1,0.000326182,0.190446 GT:PL 0/1:57,0,156
Scaffold_1 1024588 . C T 11.3381 PASS DP=13;VDB=0.392388;SGB=-0.511536;RPB=0.811069;MQB=0.0443614;MQSB=0.7;BQB=0.962269;MQ0F=0.0769231;AF1=0.49998;AC1=1;DP4=2,7,0,3;MQ=54;FQ=14.1838;PV4=1,0.365507,0.000340121,1 GT:PL 0/1:41,0,216
Scaffold_1 1024607 . T G 14.176 PASS DP=13;VDB=0.206307;SGB=-0.511536;RPB=0.596251;MQB=0.0443614;MQSB=0.7;BQB=0.962269;MQ0F=0.0769231;AF1=0.49999;AC1=1;DP4=2,7,0,3;MQ=54;FQ=17.1004;PV4=1,1,0.000340121,1 GT:PL 0/1:44,0,220
Scaffold_1 1024630 . A G 11.3381 PASS DP=13;VDB=0.0649539;SGB=-0.511536;RPB=0.127819;MQB=0.040184;MQSB=0.651439;BQB=0.748798;MQ0F=0.0769231;AF1=0.49998;AC1=1;DP4=4,6,0,3;MQ=55;FQ=14.1838;PV4=0.496504,1,0.000161063,1 GT:PL 0/1:41,0,245
Scaffold_1 1026794 . C A 14.176 PASS DP=15;VDB=0.71601;SGB=-0.511536;RPB=0.927041;MQB=0.0368832;MQSB=0.834543;BQB=0.230693;MQ0F=0;AF1=0.49999;AC1=1;DP4=5,6,2,1;MQ=55;FQ=17.1004;PV4=1,0.00177677,3.58998e-09,1 GT:PL 0/1:44,0,255
Scaffold_1 1026812 . T C 14.176 PASS DP=15;VDB=0.707536;SGB=-0.511536;RPB=0.896649;MQB=0.0368832;MQSB=0.834543;BQB=0.646383;MQ0F=0;AF1=0.49999;AC1=1;DP4=5,6,2,1;MQ=55;FQ=17.1004;PV4=1,0.164092,3.58998e-09,1 GT:PL 0/1:44,0,255
Scaffold_1 1026879 . A G 10.42 PASS DP=10;VDB=0.36;SGB=-0.453602;RPB=0.5;MQB=0;MQSB=1;BQB=0.5;MQ0F=0;AF1=0.499975;AC1=1;DP4=1,5,0,2;MQ=55;FQ=13.2265;PV4=1,0.220813,1.51598e-08,1 GT:PL 0/1:40,0,181
Scaffold_1 1026907 . T A 10.42 PASS DP=9;VDB=0.36;SGB=-0.453602;RPB=0.5;MQB=0;MQSB=1;BQB=0.833333;MQ0F=0;AF1=0.499975;AC1=1;DP4=1,5,0,2;MQ=55;FQ=13.2265;PV4=1,0.301823,1.51598e-08,1 GT:PL 0/1:40,0,183
Scaffold_1 1026913 . G T 10.42 PASS DP=9;VDB=0.36;SGB=-0.453602;RPB=0.5;MQB=0;MQSB=1;BQB=1;MQ0F=0;AF1=0.499975;AC1=1;DP4=1,5,0,2;MQ=55;FQ=13.2265;PV4=1,0.323204,1.51598e-08,1 GT:PL 0/1:40,0,181
Scaffold_1 1038385 . A G 13.2188 PASS DP=12;VDB=0.02;SGB=-0.453602;RPB=0.222222;MQB=1;MQSB=1;BQB=0.111111;MQ0F=0;AF1=0.499987;AC1=1;DP4=2,7,0,2;MQ=60;FQ=16.1222;PV4=1,1,1,1 GT:PL 0/1:43,0,181
Scaffold_1 1043596 . C T 36.0094 PASS DP=4;VDB=0.02;SGB=-0.453602;RPB=1;MQB=1;MQSB=1;BQB=1;MQ0F=0;AF1=0.500158;AC1=1;DP4=0,1,2,0;MQ=60;FQ=6.20321;PV4=0.333333,1,1,1 GT:PL 0/1:66,0,32
Scaffold_1 1046168 . G T 19.061 PASS DP=11;VDB=0.02;SGB=-0.453602;RPB=0.285714;MQB=1;MQSB=0.924584;BQB=1;MQ0F=0;AF1=0.499997;AC1=1;DP4=3,4,0,2;MQ=60;FQ=22.0421;PV4=0.5,0.343199,1,0.382549 GT:PL 0/1:49,0,221
Scaffold_1 1062436 . G T 35.0083 PASS DP=9;VDB=0.0221621;SGB=-0.511536;RPB=0.115573;MQB=0.924584;MQSB=0.924584;BQB=0.115573;MQ0F=0;AF1=0.5;AC1=1;DP4=3,3,0,3;MQ=60;FQ=38.0158;PV4=0.464286,0.000630938,1,0.000288494 GT:PL 0/1:65,0,182
Scaffold_1 1068275 . C A 63.0073 PASS DP=8;VDB=0.02;SGB=-0.453602;RPB=0.5;MQB=1;MQSB=0.861511;BQB=0;MQ0F=0;AF1=0.5;AC1=1;DP4=1,3,2,0;MQ=60;FQ=66.0141;PV4=0.4,1,1,1 GT:PL 0/1:93,0,128
Scaffold_1 1077763 . G C 67.9724 PASS DP=3;VDB=0.645206;SGB=-0.511536;MQ0F=0;AF1=1;AC1=2;DP4=0,0,3,0;MQ=60;FQ=-35.9869 GT:PL 1/1:100,9,0
Scaffold_1 1077764 . T G 44.9722 PASS DP=3;VDB=0.635923;SGB=-0.511536;MQ0F=0;AF1=1;AC1=2;DP4=0,0,3,0;MQ=60;FQ=-35.9869 GT:PL 1/1:77,9,0
Scaffold_1 1077766 . C T 60.9723 PASS DP=3;VDB=0.645206;SGB=-0.511536;MQ0F=0;AF1=1;AC1=2;DP4=0,0,3,0;MQ=60;FQ=-35.9869 GT:PL 1/1:93,9,0
Scaffold_1 1088401 . G A 25.0205 PASS DP=17;VDB=0.516498;SGB=-0.556411;RPB=0.479364;MQB=0.0144756;MQSB=0.892753;BQB=0.767432;MQ0F=0.0588235;AF1=0.499999;AC1=1;DP4=6,6,3,1;MQ=56;FQ=28.0219;PV4=0.584615,1,0.00113908,0.385894 GT:PL 0/1:55,0,255
Scaffold_1 1088411 . C T 37.0079 PASS DP=16;VDB=0.885471;SGB=-0.556411;RPB=1;MQB=0.0528036;MQSB=0.863243;BQB=0.983592;MQ0F=0.0625;AF1=0.5;AC1=1;DP4=6,6,4,0;MQ=55;FQ=40.0156;PV4=0.233516,0.266195,0.129459,1 GT:PL 0/1:67,0,255
Scaffold_1 1088421 . G A 42.0073 PASS DP=18;VDB=0.74324;SGB=-0.590765;RPB=0.985665;MQB=0.00780539;MQSB=0.863243;BQB=0.697005;MQ0F=0.0555556;AF1=0.5;AC1=1;DP4=6,5,4,1;MQ=55;FQ=45.0154;PV4=0.587912,0.177896,0.000952778,1 GT:PL 0/1:72,0,255
Scaffold_1 1088426 . A T 31.0104 PASS DP=17;VDB=0.885471;SGB=-0.556411;RPB=0.88901;MQB=0.0528036;MQSB=0.863243;BQB=0.58787;MQ0F=0.0588235;AF1=0.5;AC1=1;DP4=6,6,4,0;MQ=55;FQ=34.0168;PV4=0.233516,0.0869856,0.129459,1 GT:PL 0/1:61,0,255
Scaffold_1 1088441 . T C 29.0123 PASS DP=18;VDB=0.728443;SGB=-0.590765;RPB=0.914947;MQB=0.00673795;MQSB=0.902783;BQB=0.391062;MQ0F=0.0555556;AF1=0.5;AC1=1;DP4=7,5,4,1;MQ=55;FQ=32.0178;PV4=0.600032,0.156093,0.000581925,0.184799 GT:PL 0/1:59,0,255
Scaffold_1 1088448 . G A 28.0137 PASS DP=19;VDB=0.803107;SGB=-0.556411;RPB=0.730444;MQB=0.0449338;MQSB=0.902783;BQB=0.193781;MQ0F=0.0526316;AF1=0.5;AC1=1;DP4=7,6,4,0;MQ=55;FQ=31.0185;PV4=0.237395,0.0194057,0.0920309,0.113147 GT:PL 0/1:58,0,255
Scaffold_1 1088522 . G A 22.0341 PASS DP=11;VDB=0.725151;SGB=-0.556411;RPB=0.727822;MQB=0.0559863;MQSB=0.895781;BQB=0.279932;MQ0F=0;AF1=0.499998;AC1=1;DP4=3,3,3,1;MQ=54;FQ=25.0286;PV4=0.571429,0.0893353,0.0183986,0.457061 GT:PL 0/1:52,0,178
Scaffold_1 1088529 . A G 29.0123 PASS DP=11;VDB=0.725151;SGB=-0.556411;RPB=0.727822;MQB=0.0559863;MQSB=0.895781;BQB=0.895781;MQ0F=0;AF1=0.5;AC1=1;DP4=3,3,3,1;MQ=54;FQ=32.0178;PV4=0.571429,0.284516,0.0183986,0.160093 GT:PL 0/1:59,0,168
Scaffold_1 1088659 . G A 41.0074 PASS DP=18;VDB=0.100421;SGB=-0.556411;RPB=0.460409;MQB=0.0131237;MQSB=0.483225;BQB=0.974685;MQ0F=0;AF1=0.5;AC1=1;DP4=6,7,0,4;MQ=55;FQ=44.0154;PV4=0.237395,0.449021,1.6096e-10,1 GT:PL 0/1:71,0,255
Scaffold_1 1088667 . G A 45.0072 PASS DP=16;VDB=0.106137;SGB=-0.556411;RPB=0.579578;MQB=0.0161635;MQSB=0.367879;BQB=0.948127;MQ0F=0;AF1=0.5;AC1=1;DP4=6,5,0,4;MQ=55;FQ=48.0153;PV4=0.103297,0.303162,3.3275e-09,1 GT:PL 0/1:75,0,255
Scaffold_1 1088682 . A G 50.0072 PASS DP=14;VDB=0.112085;SGB=-0.556411;RPB=0.864302;MQB=0.0211283;MQSB=0.245404;BQB=0.997028;MQ0F=0;AF1=0.5;AC1=1;DP4=6,3,0,4;MQ=54;FQ=53.0153;PV4=0.0699301,0.393758,6.96617e-08,1 GT:PL 0/1:80,0,237
Scaffold_1 1088690 . A G 49.0072 PASS DP=15;VDB=0.118267;SGB=-0.556411;RPB=0.960789;MQB=0.0183156;MQSB=0.240074;BQB=0.852144;MQ0F=0;AF1=0.5;AC1=1;DP4=7,3,0,4;MQ=54;FQ=52.0153;PV4=0.0699301,0.435403,1.51966e-08,1 GT:PL 0/1:79,0,252
Scaffold_1 1088718 . T C 63.0073 PASS DP=12;VDB=0.396258;SGB=-0.590765;RPB=0.838008;MQB=0.0194886;MQSB=0.236382;BQB=0.838008;MQ0F=0;AF1=0.5;AC1=1;DP4=4,3,0,5;MQ=51;FQ=66.0155;PV4=0.0808081,0.417762,1.5048e-05,1 GT:PL 0/1:93,0,188
Scaffold_1 1088725 . A T 56.0072 PASS DP=12;VDB=0.118267;SGB=-0.556411;RPB=0.361741;MQB=0.0401934;MQSB=0.361741;BQB=0.924449;MQ0F=0;AF1=0.5;AC1=1;DP4=4,3,0,4;MQ=53;FQ=59.0154;PV4=0.193939,1,1.48574e-06,0.0784302 GT:PL 0/1:86,0,196
Scaffold_1 1088726 . A G 63.0073 PASS DP=12;VDB=0.400625;SGB=-0.590765;RPB=0.760054;MQB=0.0194886;MQSB=0.236382;BQB=0.760054;MQ0F=0;AF1=0.5;AC1=1;DP4=4,3,0,5;MQ=51;FQ=66.0155;PV4=0.0808081,0.113216,1.5048e-05,0.135162 GT:PL 0/1:93,0,195
Scaffold_1 1088751 . C T 30.0112 PASS DP=9;VDB=0.519801;SGB=-0.511536;RPB=0.924584;MQB=0.115573;MQSB=0.406082;BQB=0.809011;MQ0F=0;AF1=0.5;AC1=1;DP4=4,2,0,3;MQ=53;FQ=33.0172;PV4=0.166667,1,0.000447371,1 GT:PL 0/1:60,0,169
Scaffold_1 1098962 . G T 22.0341 PASS DP=8;VDB=0.02;SGB=-0.453602;RPB=1;MQB=1;MQSB=0.992367;BQB=1;MQ0F=0;AF1=0.499998;AC1=1;DP4=2,4,2,0;MQ=60;FQ=25.0286;PV4=0.428571,1,1,1 GT:PL 0/1:52,0,181
Scaffold_1 1103476 . G T 52.0072 PASS DP=14;VDB=0.847724;SGB=-0.590765;RPB=0.980199;MQB=0.011109;MQSB=0.913931;BQB=0.867428;MQ0F=0.0714286;AF1=0.5;AC1=1;DP4=6,3,4,1;MQ=52;FQ=55.0154;PV4=1,0.331205,2.73807e-05,0.432013 GT:PL 0/1:82,0,210
Scaffold_1 1103479 . A G 52.0072 PASS DP=14;VDB=0.855578;SGB=-0.590765;RPB=0.980199;MQB=0.011109;MQSB=0.913931;BQB=0.980199;MQ0F=0.0714286;AF1=0.5;AC1=1;DP4=6,3,4,1;MQ=52;FQ=55.0154;PV4=1,0.251894,2.73807e-05,0.364123 GT:PL 0/1:82,0,220
Scaffold_1 1103490 . G A 44.0073 PASS DP=14;VDB=0.325692;SGB=-0.556411;RPB=0.98568;MQB=0.0249144;MQSB=0.995736;BQB=0.98568;MQ0F=0.0714286;AF1=0.5;AC1=1;DP4=6,2,3,1;MQ=52;FQ=47.0153;PV4=1,0.478602,0.000243895,1 GT:PL 0/1:74,0,195
Scaffold_1 1103527 . A T 44.0073 PASS DP=13;VDB=0.354838;SGB=-0.556411;RPB=0.793923;MQB=0.0249144;MQSB=0.995736;BQB=0.968069;MQ0F=0.0769231;AF1=0.5;AC1=1;DP4=6,2,3,1;MQ=52;FQ=47.0153;PV4=1,1,0.000243895,0.485012 GT:PL 0/1:74,0,194