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Scaffold_1 7898 . T C 26.0177 PASS DP=8;VDB=0.02;SGB=-0.453602;RPB=0.5;MQB=0;MQSB=0.5;BQB=0.75;MQ0F=0;AF1=0.499999;AC1=1;DP4=2,2,2,0;MQ=54;FQ=29.0205;PV4=0.466667,1,0,0.344215 GT:PL 0/1:56,0,130
Scaffold_1 7899 . G A 20.0499 PASS DP=8;VDB=0.02;SGB=-0.453602;RPB=0.333333;MQB=0;MQSB=0.600535;BQB=0.333333;MQ0F=0;AF1=0.499997;AC1=1;DP4=3,3,2,0;MQ=56;FQ=23.0366;PV4=0.464286,1,0,0.25956 GT:PL 0/1:50,0,152
Scaffold_1 7931 . C T 17.0924 PASS DP=9;VDB=0.02;SGB=-0.453602;RPB=0.571429;MQB=0;MQSB=0.649731;BQB=0.285714;MQ0F=0;AF1=0.499995;AC1=1;DP4=3,4,2,0;MQ=56;FQ=20.058;PV4=0.444444,1,0,1 GT:PL 0/1:47,0,180
Scaffold_1 7932 . A G 17.0924 PASS DP=9;VDB=0.02;SGB=-0.453602;RPB=0.571429;MQB=0;MQSB=0.649731;BQB=0.428571;MQ0F=0;AF1=0.499995;AC1=1;DP4=3,4,2,0;MQ=56;FQ=20.058;PV4=0.444444,1,0,1 GT:PL 0/1:47,0,183
Scaffold_1 7936 . C T 17.0924 PASS DP=9;VDB=0.02;SGB=-0.453602;RPB=0.571429;MQB=0;MQSB=0.649731;BQB=0.428571;MQ0F=0;AF1=0.499995;AC1=1;DP4=3,4,2,0;MQ=56;FQ=20.058;PV4=0.444444,1,0,1 GT:PL 0/1:47,0,171
Scaffold_1 7937 . A G 20.0499 PASS DP=9;VDB=0.02;SGB=-0.453602;RPB=0.666667;MQB=0;MQSB=0.62023;BQB=0.5;MQ0F=0;AF1=0.499997;AC1=1;DP4=2,4,2,0;MQ=56;FQ=23.0366;PV4=0.428571,1,0,1 GT:PL 0/1:50,0,167
Scaffold_1 7941 . C T 17.0924 PASS DP=9;VDB=0.02;SGB=-0.453602;RPB=0.571429;MQB=0;MQSB=0.649731;BQB=0.428571;MQ0F=0;AF1=0.499995;AC1=1;DP4=3,4,2,0;MQ=56;FQ=20.058;PV4=0.444444,1,0,1 GT:PL 0/1:47,0,180
Scaffold_1 7946 . C T 17.0924 PASS DP=10;VDB=0.02;SGB=-0.453602;RPB=0.857143;MQB=0;MQSB=0.809011;BQB=0.285714;MQ0F=0;AF1=0.499995;AC1=1;DP4=4,3,2,0;MQ=56;FQ=20.058;PV4=0.5,1,0,1 GT:PL 0/1:47,0,176
Scaffold_1 7949 . T C 26.0177 PASS DP=9;VDB=0.02;SGB=-0.453602;RPB=1;MQB=0;MQSB=1;BQB=0.25;MQ0F=0;AF1=0.499999;AC1=1;DP4=3,1,2,0;MQ=54;FQ=29.0204;PV4=1,1,0,1 GT:PL 0/1:56,0,105
Scaffold_1 7954 . A C 11.3381 PASS DP=11;VDB=0.02;SGB=-0.453602;RPB=0.888889;MQB=0;MQSB=0.763675;BQB=0.222222;MQ0F=0;AF1=0.49998;AC1=1;DP4=5,4,2,0;MQ=57;FQ=14.1838;PV4=0.490909,1,0,1 GT:PL 0/1:41,0,196
Scaffold_1 7964 . C T 11.3381 PASS DP=11;VDB=0.02;SGB=-0.453602;RPB=0.888889;MQB=0;MQSB=0.763675;BQB=0.555556;MQ0F=0;AF1=0.49998;AC1=1;DP4=5,4,2,0;MQ=57;FQ=14.1838;PV4=0.490909,1,0,1 GT:PL 0/1:41,0,218
Scaffold_1 8011 . G A 14.176 PASS DP=16;VDB=0.978827;SGB=-0.556411;RPB=0.992674;MQB=0.0144756;MQSB=0.428674;BQB=0.346864;MQ0F=0.0625;AF1=0.49999;AC1=1;DP4=6,6,4,0;MQ=54;FQ=17.1004;PV4=0.233516,1,3.83073e-06,1 GT:PL 0/1:44,0,253
Scaffold_1 8106 . C T 33.0091 PASS DP=20;VDB=0.892823;SGB=-0.590765;RPB=0.839542;MQB=0.00590723;MQSB=0.974693;BQB=0.36007;MQ0F=0.05;AF1=0.5;AC1=1;DP4=8,5,3,2;MQ=53;FQ=36.0162;PV4=1,1,3.33373e-07,0.246885 GT:PL 0/1:63,0,255
Scaffold_1 8142 . G T 35.0083 PASS DP=18;VDB=0.803107;SGB=-0.556411;RPB=0.832083;MQB=0.0144756;MQSB=0.978183;BQB=0.697471;MQ0F=0;AF1=0.5;AC1=1;DP4=6,6,2,2;MQ=54;FQ=38.0158;PV4=1,1,1.31998e-07,0.203016 GT:PL 0/1:65,0,255
Scaffold_1 8185 . A G 12.272 PASS DP=17;VDB=0.0481132;SGB=-0.511536;RPB=0.989637;MQB=0.0342181;MQSB=0.569783;BQB=0.959189;MQ0F=0;AF1=0.499984;AC1=1;DP4=6,6,0,3;MQ=56;FQ=15.1496;PV4=0.228571,0.332089,1.57303e-06,1 GT:PL 0/1:42,0,255
Scaffold_1 8187 . A G 15.1417 PASS DP=18;VDB=0.0532881;SGB=-0.511536;RPB=0.862013;MQB=0.0368832;MQSB=0.606531;BQB=0.862013;MQ0F=0;AF1=0.499992;AC1=1;DP4=5,6,0,3;MQ=55;FQ=18.0829;PV4=0.258242,0.235101,4.23791e-06,1 GT:PL 0/1:45,0,255
Scaffold_1 8196 . A G 15.1417 PASS DP=17;VDB=0.0532881;SGB=-0.511536;RPB=0.996974;MQB=0.0368832;MQSB=0.606531;BQB=0.896649;MQ0F=0;AF1=0.499992;AC1=1;DP4=5,6,0,3;MQ=55;FQ=18.0829;PV4=0.258242,0.34432,4.23791e-06,1 GT:PL 0/1:45,0,255
Scaffold_1 8198 . T A 12.272 PASS DP=17;VDB=0.0481133;SGB=-0.511536;RPB=0.93697;MQB=0.0342181;MQSB=0.569783;BQB=0.959189;MQ0F=0;AF1=0.499984;AC1=1;DP4=6,6,0,3;MQ=56;FQ=15.1496;PV4=0.228571,0.35006,1.57303e-06,1 GT:PL 0/1:42,0,255
Scaffold_1 8211 . A G 12.272 PASS DP=17;VDB=0.0481133;SGB=-0.511536;RPB=0.77073;MQB=0.0342181;MQSB=0.569783;BQB=0.91051;MQ0F=0;AF1=0.499984;AC1=1;DP4=6,6,0,3;MQ=56;FQ=15.1496;PV4=0.228571,1,1.57303e-06,1 GT:PL 0/1:42,0,255
Scaffold_1 8213 . T C 15.1417 PASS DP=17;VDB=0.0481133;SGB=-0.511536;RPB=0.823708;MQB=0.0368832;MQSB=0.606531;BQB=1;MQ0F=0;AF1=0.499992;AC1=1;DP4=5,6,0,3;MQ=55;FQ=18.0829;PV4=0.258242,0.360443,4.23791e-06,1 GT:PL 0/1:45,0,255
Scaffold_1 8214 . G A 12.272 PASS DP=17;VDB=0.0481133;SGB=-0.511536;RPB=0.77073;MQB=0.0342181;MQSB=0.569783;BQB=0.976835;MQ0F=0;AF1=0.499984;AC1=1;DP4=6,6,0,3;MQ=56;FQ=15.1496;PV4=0.228571,0.333457,1.57303e-06,1 GT:PL 0/1:42,0,255
Scaffold_1 8216 . T A 10.42 PASS DP=18;VDB=0.0481133;SGB=-0.511536;RPB=0.729713;MQB=0.0342181;MQSB=0.569783;BQB=0.989637;MQ0F=0;AF1=0.499975;AC1=1;DP4=6,6,0,3;MQ=56;FQ=13.2265;PV4=0.228571,0.340449,1.57303e-06,1 GT:PL 0/1:40,0,255
Scaffold_1 9721 . A C 15.1417 PASS DP=6;VDB=0.02;SGB=-0.453602;RPB=0.666667;MQB=1;MQSB=1;BQB=0.5;MQ0F=0;AF1=0.499992;AC1=1;DP4=1,2,0,2;MQ=60;FQ=18.0829;PV4=1,0.136114,1,1 GT:PL 0/1:45,0,102
Scaffold_1 25716 . G A 24.8096 PASS DP=13;VDB=0.0382226;SGB=-0.616816;RPB=0.891517;MQB=0.208021;BQB=0.8618;MQ0F=0.384615;AF1=0.62426;AC1=1;DP4=5,0,6,0;MQ=17;FQ=-23.0075;PV4=1,1,1,1 GT:PL 0/1:54,0,4
Scaffold_1 26483 . T G 152.008 PASS DP=48;VDB=0.132939;SGB=-0.693021;RPB=0.600054;MQB=0.999896;MQSB=0.88655;BQB=0.873642;MQ0F=0.145833;AF1=0.5;AC1=1;DP4=1,12,4,23;MQ=26;FQ=84.0157;PV4=1,0.306721,0.468154,0.340029 GT:PL 0/1:182,0,111
Scaffold_1 46905 . G T 17.0924 PASS DP=7;VDB=0.02;SGB=-0.453602;RPB=0.8;MQB=1;MQSB=1.01283;BQB=0.9;MQ0F=0;AF1=0.499995;AC1=1;DP4=3,2,0,2;MQ=60;FQ=20.058;PV4=0.428571,1,1,1 GT:PL 0/1:47,0,137
Scaffold_1 49689 . G A 92.0077 PASS DP=9;VDB=0.644504;SGB=-0.590765;RPB=0.2;MQB=0.8;MQSB=0.810265;BQB=1;MQ0F=0;AF1=0.500002;AC1=1;DP4=2,0,1,4;MQ=50;FQ=25.0286;PV4=0.142857,0.428376,0.330667,1 GT:PL 0/1:122,0,52
Scaffold_1 49701 . A G 75.0075 PASS DP=7;VDB=0.592802;SGB=-0.590765;RPB=0.2;MQB=0.8;MQSB=0.8;BQB=0.8;MQ0F=0;AF1=0.500001;AC1=1;DP4=2,0,0,5;MQ=47;FQ=28.0218;PV4=0.047619,0.288066,0.243401,0.204741 GT:PL 0/1:105,0,55
Scaffold_1 49770 . T C 25.0214 PASS DP=4;VDB=0.76;SGB=-0.453602;RPB=1;MQB=0;MQSB=1;BQB=0;MQ0F=0;AF1=0.500099;AC1=1;DP4=2,0,1,1;MQ=48;FQ=7.77377;PV4=1,1,0.0321993,0.211325 GT:PL 0/1:55,0,34
Scaffold_1 49797 . C T 71.0075 PASS DP=6;VDB=0.828494;SGB=-0.556411;RPB=0.5;MQB=0;MQSB=1;BQB=0.875;MQ0F=0;AF1=0.500006;AC1=1;DP4=2,0,3,1;MQ=45;FQ=19.069;PV4=1,1,0.00591715,0.149194 GT:PL 0/1:101,0,46
Scaffold_1 49800 . T C 68.0074 PASS DP=6;VDB=0.828494;SGB=-0.556411;RPB=0.5;MQB=0;MQSB=1;BQB=0.875;MQ0F=0;AF1=0.500006;AC1=1;DP4=2,0,3,1;MQ=45;FQ=19.069;PV4=1,1,0.00591715,0.116185 GT:PL 0/1:98,0,46
Scaffold_1 49867 . T C 71.0109 PASS DP=8;VDB=0.725151;SGB=-0.556411;RPB=0.5;MQB=0.875;MQSB=0.861511;BQB=0;MQ0F=0;AF1=0.500397;AC1=1;DP4=0,2,3,1;MQ=41;FQ=3.54723;PV4=0.4,1,1,1 GT:PL 0/1:101,0,28
Scaffold_1 49928 . C T 177.009 PASS DP=14;VDB=0.327896;SGB=-0.670168;RPB=0.914584;MQB=0.968368;MQSB=0.961166;BQB=0.996435;MQ0F=0;AF1=0.500005;AC1=1;DP4=0,3,7,3;MQ=46;FQ=20.058;PV4=0.0699301,0.361392,1,0.347695 GT:PL 0/1:207,0,47
Scaffold_1 49940 . T C 182.009 PASS DP=13;VDB=0.0759488;SGB=-0.662043;RPB=0.760709;MQB=0.962269;MQSB=0.982603;BQB=0.857404;MQ0F=0;AF1=0.500002;AC1=1;DP4=0,3,6,3;MQ=46;FQ=25.0286;PV4=0.181818,1,1,0.243614 GT:PL 0/1:212,0,52
Scaffold_1 50053 . T C 32.0097 PASS DP=4;VDB=0.52;SGB=-0.453602;RPB=1;MQB=1;MQSB=1;BQB=1;MQ0F=0;AF1=0.5;AC1=1;DP4=0,2,2,0;MQ=40;FQ=32.0075;PV4=0.333333,1,1,1 GT:PL 0/1:62,0,62
Scaffold_1 50055 . A G 32.0097 PASS DP=4;VDB=0.56;SGB=-0.453602;RPB=1;MQB=1;MQSB=1;BQB=1;MQ0F=0;AF1=0.5;AC1=1;DP4=0,2,2,0;MQ=40;FQ=32.0075;PV4=0.333333,1,1,1 GT:PL 0/1:62,0,62
Scaffold_1 50086 . T G 70.0108 PASS DP=4;VDB=0.921489;SGB=-0.511536;RPB=1;MQB=1;MQSB=1;BQB=1;MQ0F=0;AF1=0.500397;AC1=1;DP4=0,1,1,2;MQ=51;FQ=3.54723;PV4=1,0.333333,1,0.213681 GT:PL 0/1:100,0,28
Scaffold_1 51022 . C T 107.264 PASS DP=5;VDB=0.834014;SGB=-0.590765;MQSB=1;MQ0F=0;AF1=1;AC1=2;DP4=0,0,4,1;MQ=40;FQ=-41.9862 GT:PL 1/1:140,15,0
Scaffold_1 51025 . C T 98.2638 PASS DP=5;VDB=0.834014;SGB=-0.590765;MQSB=1;MQ0F=0;AF1=1;AC1=2;DP4=0,0,4,1;MQ=40;FQ=-41.9862 GT:PL 1/1:131,15,0
Scaffold_1 51083 . A G 184.067 PASS DP=7;VDB=0.281405;SGB=-0.636426;MQSB=1.01283;MQ0F=0;AF1=1;AC1=2;DP4=0,0,4,3;MQ=40;FQ=-47.986 GT:PL 1/1:217,21,0
Scaffold_1 51097 . C T 130.79 PASS DP=7;VDB=0.0424884;SGB=-0.590765;RPB=1;MQB=1;MQSB=0.861511;BQB=1;MQ0F=0.142857;AF1=1;AC1=2;DP4=0,1,3,2;MQ=37;FQ=-36.9867;PV4=1,1,1,1 GT:PL 1/1:163,10,0
Scaffold_1 51149 . A G 165.265 PASS DP=8;VDB=0.831019;SGB=-0.636426;RPB=1;MQB=1;MQSB=0.900802;BQB=1;MQ0F=0.125;AF1=1;AC1=2;DP4=0,1,3,4;MQ=43;FQ=-41.9862;PV4=1,0.319077,1,0.339063 GT:PL 1/1:198,15,0
Scaffold_1 51194 . T C 138.79 PASS DP=6;VDB=0.631784;SGB=-0.590765;RPB=1;MQB=1;MQSB=1;BQB=1;MQ0F=0.166667;AF1=1;AC1=2;DP4=0,1,2,3;MQ=51;FQ=-36.9867;PV4=1,1,1,0.316813 GT:PL 1/1:171,10,0
Scaffold_1 56623 . T C 177.067 PASS DP=7;VDB=0.0827521;SGB=-0.636426;MQSB=1;MQ0F=0;AF1=1;AC1=2;DP4=0,0,5,2;MQ=60;FQ=-47.986 GT:PL 1/1:210,21,0
Scaffold_1 56749 . G C 171.067 PASS DP=7;VDB=0.669559;SGB=-0.636426;MQSB=0.6;MQ0F=0;AF1=1;AC1=2;DP4=0,0,2,5;MQ=57;FQ=-47.986 GT:PL 1/1:204,21,0
Scaffold_1 56843 . A G 222.003 PASS DP=11;VDB=0.732462;SGB=-0.676189;MQSB=0.950952;MQ0F=0;AF1=1;AC1=2;DP4=0,0,6,5;MQ=60;FQ=-59.9861 GT:PL 1/1:255,33,0
Scaffold_1 57322 . T G 195.067 PASS DP=8;VDB=0.329396;SGB=-0.636426;MQSB=1.01283;MQ0F=0;AF1=1;AC1=2;DP4=0,0,3,4;MQ=60;FQ=-47.986 GT:PL 1/1:228,21,0
Scaffold_1 57323 . G T 183.134 PASS DP=8;VDB=0.537869;SGB=-0.616816;MQSB=1;MQ0F=0;AF1=1;AC1=2;DP4=0,0,2,4;MQ=60;FQ=-44.9861 GT:PL 1/1:216,18,0
Scaffold_1 60876 . C A 22.0341 PASS DP=12;VDB=0.0279572;SGB=-0.511536;RPB=0.472367;MQB=1;MQSB=0.964642;BQB=0.309786;MQ0F=0;AF1=0.499998;AC1=1;DP4=7,1,0,3;MQ=60;FQ=25.0286;PV4=0.0242424,0.0753638,1,1 GT:PL 0/1:52,0,176
Scaffold_1 64158 . G T 16.1143 PASS DP=11;VDB=0.02;SGB=-0.453602;RPB=0.375;MQB=1;MQSB=0.952347;BQB=0.75;MQ0F=0;AF1=0.499994;AC1=1;DP4=5,3,0,2;MQ=60;FQ=19.069;PV4=0.444444,1,1,0.491571 GT:PL 0/1:46,0,219
Scaffold_1 72695 . C A 19.061 PASS DP=10;VDB=0.02;SGB=-0.453602;RPB=0;MQB=0.857143;MQSB=0.89338;BQB=0.714286;MQ0F=0;AF1=0.499997;AC1=1;DP4=5,2,0,2;MQ=60;FQ=22.0421;PV4=0.166667,0.41957,1,0.0879714 GT:PL 0/1:49,0,200
Scaffold_1 74004 . C A 19.061 PASS DP=10;VDB=0.02;SGB=-0.453602;RPB=0.285714;MQB=1;BQB=0.714286;MQ0F=0;AF1=0.499997;AC1=1;DP4=0,7,0,2;MQ=60;FQ=22.0421;PV4=1,1,1,0.308881 GT:PL 0/1:49,0,147
Scaffold_1 75500 . C T 10.42 PASS DP=14;VDB=0.52;SGB=-0.453602;RPB=0.9;MQB=0.7;MQSB=0.660716;BQB=0.6;MQ0F=0;AF1=0.499975;AC1=1;DP4=4,6,2,0;MQ=47;FQ=13.2265;PV4=0.454545,1,0.354015,1 GT:PL 0/1:40,0,238
Scaffold_1 75518 . C T 26.0177 PASS DP=17;VDB=0.897278;SGB=-0.511536;RPB=0.931063;MQB=0.563599;MQSB=0.995381;BQB=0.525788;MQ0F=0;AF1=0.499999;AC1=1;DP4=6,8,3,0;MQ=50;FQ=29.0205;PV4=0.205882,1,0.233623,0.395224 GT:PL 0/1:56,0,255
Scaffold_1 75521 . T C 26.0177 PASS DP=18;VDB=0.897278;SGB=-0.511536;RPB=0.931063;MQB=0.563599;MQSB=0.995381;BQB=0.318907;MQ0F=0;AF1=0.499999;AC1=1;DP4=6,8,3,0;MQ=50;FQ=29.0205;PV4=0.205882,1,0.233623,0.360263 GT:PL 0/1:56,0,255
Scaffold_1 75630 . G T 145.008 PASS DP=15;VDB=0.145738;SGB=-0.636426;RPB=1;MQB=0.295105;MQSB=0.991513;BQB=0.221641;MQ0F=0;AF1=0.5;AC1=1;DP4=7,1,4,3;MQ=54;FQ=128.962;PV4=0.282051,1,0.0376708,1 GT:PL 0/1:175,0,156
Scaffold_1 80262 . A G 63.0073 PASS DP=17;VDB=0.631784;SGB=-0.590765;RPB=0.823561;MQB=0.236017;MQSB=0.0187517;BQB=0.823561;MQ0F=0;AF1=0.5;AC1=1;DP4=5,6,5,0;MQ=43;FQ=66.0155;PV4=0.0934066,1,0.0907617,1 GT:PL 0/1:93,0,227
Scaffold_1 80364 . G A 22.0341 PASS DP=9;VDB=0.440791;SGB=-0.511536;RPB=0.809011;MQB=0.809011;MQSB=0.89338;BQB=0.924584;MQ0F=0.111111;AF1=0.499998;AC1=1;DP4=1,5,3,0;MQ=36;FQ=25.0286;PV4=0.047619,1,0.165638,0.40914 GT:PL 0/1:52,0,145
Scaffold_1 80399 . T C 43.0073 PASS DP=12;VDB=0.902899;SGB=-0.556411;RPB=0.562708;MQB=0.763675;MQSB=0.8618;BQB=0.763675;MQ0F=0.0833333;AF1=0.5;AC1=1;DP4=2,5,3,1;MQ=37;FQ=46.0153;PV4=0.242424,1,0.12606,1 GT:PL 0/1:73,0,158
Scaffold_1 80487 . C T 216.009 PASS DP=19;VDB=0.358505;SGB=-0.680642;RPB=0.0258061;MQB=0.378204;MQSB=0.594025;BQB=0.957193;MQ0F=0;AF1=0.5;AC1=1;DP4=3,4,7,5;MQ=53;FQ=134.016;PV4=0.649917,0.298696,1,0.416679 GT:PL 0/1:246,0,161
Scaffold_1 80517 . A C 225.009 PASS DP=21;VDB=0.39638;SGB=-0.688148;RPB=0.0504553;MQB=0.82972;MQSB=0.845852;BQB=0.999048;MQ0F=0;AF1=0.5;AC1=1;DP4=3,2,9,6;MQ=54;FQ=72.0156;PV4=1,0.378519,1,1 GT:PL 0/1:255,0,99
Scaffold_1 80886 . G A 10.42 PASS DP=15;VDB=0.360777;SGB=-0.556411;RPB=0.122151;MQB=0.0773047;MQSB=0.714506;BQB=0.569783;MQ0F=0.0666667;AF1=0.499975;AC1=1;DP4=4,6,3,1;MQ=47;FQ=13.2265;PV4=0.559441,0.168748,0.00369602,1 GT:PL 0/1:40,0,249
Scaffold_1 81045 . G C 120.008 PASS DP=14;VDB=0.15244;SGB=-0.636426;RPB=0.966012;MQB=0.640197;MQSB=0.332178;BQB=0.640197;MQ0F=0.0714286;AF1=0.5;AC1=1;DP4=3,4,5,2;MQ=32;FQ=71.0155;PV4=0.592075,1,1,1 GT:PL 0/1:150,0,98
Scaffold_1 81098 . A G 82.0076 PASS DP=12;VDB=0.021281;SGB=-0.590765;RPB=0.297172;MQB=0.950952;MQSB=0.763675;BQB=0.683497;MQ0F=0;AF1=0.5;AC1=1;DP4=3,3,4,1;MQ=37;FQ=76.3767;PV4=0.545455,1,1,1 GT:PL 0/1:112,0,104
Scaffold_1 81180 . C T 17.0924 PASS DP=12;VDB=0.0411132;SGB=-0.511536;RPB=0.898672;MQB=0.596251;MQSB=0.760054;BQB=0.811069;MQ0F=0;AF1=0.499995;AC1=1;DP4=5,4,2,1;MQ=44;FQ=20.058;PV4=1,0.0635586,0.078303,1 GT:PL 0/1:47,0,203
Scaffold_1 81226 . A C 16.1143 PASS DP=19;VDB=0.366751;SGB=-0.556411;RPB=0.658617;MQB=0.926163;MQSB=0.954207;BQB=0.735784;MQ0F=0.0526316;AF1=0.499994;AC1=1;DP4=6,5,4,0;MQ=40;FQ=19.069;PV4=0.230769,0.174995,0.194354,1 GT:PL 0/1:46,0,218
Scaffold_1 81275 . T G 48.0072 PASS DP=15;VDB=0.836818;SGB=-0.590765;RPB=0.989343;MQB=0.765017;MQSB=0.876998;BQB=0.765017;MQ0F=0.0666667;AF1=0.5;AC1=1;DP4=4,4,4,1;MQ=37;FQ=51.0153;PV4=0.56488,0.130012,0.198872,0.225184 GT:PL 0/1:78,0,159
Scaffold_1 81327 . C T 84.0076 PASS DP=16;VDB=0.473837;SGB=-0.651104;RPB=0.122828;MQB=0.978183;MQSB=0.951579;BQB=0.151464;MQ0F=0.0625;AF1=0.5;AC1=1;DP4=3,5,5,3;MQ=36;FQ=87.014;PV4=0.61927,0.0653448,0.425567,0.270629 GT:PL 0/1:114,0,148
Scaffold_1 81340 . A T 94.0077 PASS DP=16;VDB=0.457239;SGB=-0.651104;RPB=0.544441;MQB=0.819936;MQSB=0.96612;BQB=0.951579;MQ0F=0.0625;AF1=0.5;AC1=1;DP4=3,5,5,3;MQ=39;FQ=97.0142;PV4=0.61927,1,0.243594,1 GT:PL 0/1:124,0,158
Scaffold_1 81441 . T C 225.009 PASS DP=25;VDB=0.277209;SGB=-0.689466;RPB=0.992359;MQB=0.918304;MQSB=0.488445;BQB=0.933295;MQ0F=0;AF1=0.5;AC1=1;DP4=3,2,7,9;MQ=47;FQ=77.0156;PV4=0.635117,0.0874084,0.414505,1 GT:PL 0/1:255,0,104
Scaffold_1 82001 . A C 11.3381 PASS DP=14;VDB=0.740842;SGB=-0.556411;RPB=0.864302;MQB=0.0320494;MQSB=0.697593;BQB=0.651439;MQ0F=0;AF1=0.49998;AC1=1;DP4=1,8,3,1;MQ=46;FQ=14.1838;PV4=0.0517483,1,0.000113125,0.269865 GT:PL 0/1:41,0,192
Scaffold_1 82137 . G A 47.0072 PASS DP=21;VDB=0.995629;SGB=-0.590765;RPB=0.36007;MQB=0.0541393;MQSB=0.284796;BQB=0.906304;MQ0F=0;AF1=0.5;AC1=1;DP4=7,6,0,5;MQ=55;FQ=50.0153;PV4=0.101307,0.198656,0.000393457,0.144279 GT:PL 0/1:77,0,255
Scaffold_1 87654 . C A 25.0205 PASS DP=7;VDB=0.02;SGB=-0.453602;RPB=0.4;MQB=0.8;MQSB=0.810265;BQB=0.6;MQ0F=0;AF1=0.499999;AC1=1;DP4=4,1,0,2;MQ=58;FQ=28.0219;PV4=0.142857,1,1,1 GT:PL 0/1:55,0,133
Scaffold_1 98685 . A C 65.0101 PASS DP=8;VDB=0.354794;SGB=-0.511536;RPB=1;MQB=1;MQSB=1;BQB=1;MQ0F=0;AF1=0.500315;AC1=1;DP4=0,1,2,1;MQ=60;FQ=4.13346;PV4=1,0.333333,1,1 GT:PL 0/1:95,0,29
Scaffold_1 99276 . G T 20.0499 PASS DP=14;VDB=0.0221621;SGB=-0.511536;RPB=0.127819;MQB=1;MQSB=1;BQB=0.040184;MQ0F=0;AF1=0.499997;AC1=1;DP4=5,5,3,0;MQ=60;FQ=23.0366;PV4=0.230769,0.00107362,1,0.00275756 GT:PL 0/1:50,0,246
Scaffold_1 107648 . A G 21.0411 PASS DP=8;VDB=0.02;SGB=-0.453602;RPB=0;MQB=0.4;MQSB=0.7;BQB=0.4;MQ0F=0.125;AF1=0.499998;AC1=1;DP4=3,2,2,0;MQ=50;FQ=24.0321;PV4=1,1,0.353386,0.000702796 GT:PL 0/1:51,0,108
Scaffold_1 107653 . G A 23.0285 PASS DP=7;VDB=0.02;SGB=-0.453602;RPB=0;MQB=0.4;MQSB=0.7;BQB=1;MQ0F=0.142857;AF1=0.499999;AC1=1;DP4=3,2,2,0;MQ=50;FQ=26.0258;PV4=1,1,0.353386,0.288066 GT:PL 0/1:53,0,126
Scaffold_1 107659 . T A 27.0155 PASS DP=7;VDB=0.793693;SGB=-0.511536;RPB=0.607698;MQB=0.202566;MQSB=0.7;BQB=0.607698;MQ0F=0.142857;AF1=0.499999;AC1=1;DP4=3,1,2,1;MQ=50;FQ=30.0193;PV4=1,1,0.0152575,1 GT:PL 0/1:57,0,108
Scaffold_1 107666 . C T 20.0499 PASS DP=8;VDB=0.02;SGB=-0.453602;RPB=0.333333;MQB=0.333333;MQSB=0.666667;BQB=0.5;MQ0F=0.125;AF1=0.499997;AC1=1;DP4=4,2,2,0;MQ=51;FQ=23.0366;PV4=1,1,0.301823,1 GT:PL 0/1:50,0,142
Scaffold_1 107689 . G C 23.0285 PASS DP=7;VDB=0.02;SGB=-0.453602;RPB=0.8;MQB=0;MQSB=1;BQB=0.8;MQ0F=0;AF1=0.499999;AC1=1;DP4=4,1,2,0;MQ=55;FQ=26.0258;PV4=1,1,0,1 GT:PL 0/1:53,0,142
Scaffold_1 107698 . C G 20.0499 PASS DP=8;VDB=0.02;SGB=-0.453602;RPB=1;MQB=0;MQSB=0.666667;BQB=0.666667;MQ0F=0;AF1=0.499997;AC1=1;DP4=4,2,2,0;MQ=56;FQ=23.0366;PV4=1,1,0,1 GT:PL 0/1:50,0,164
Scaffold_1 107716 . C T 12.272 PASS DP=8;VDB=0.02;SGB=-0.453602;RPB=0.8;MQB=0;MQSB=0.6;BQB=0.5;MQ0F=0;AF1=0.499984;AC1=1;DP4=3,2,2,0;MQ=55;FQ=15.1496;PV4=1,0.0586934,0,1 GT:PL 0/1:42,0,158
Scaffold_1 107721 . G C 23.0285 PASS DP=7;VDB=0.02;SGB=-0.453602;RPB=0.8;MQB=0;MQSB=0.6;BQB=1;MQ0F=0;AF1=0.499999;AC1=1;DP4=3,2,2,0;MQ=55;FQ=26.0258;PV4=1,1,0,1 GT:PL 0/1:53,0,158
Scaffold_1 107729 . C T 26.0177 PASS DP=6;VDB=0.02;SGB=-0.453602;RPB=0.5;MQB=0;MQSB=0.5;BQB=1;MQ0F=0;AF1=0.499999;AC1=1;DP4=2,2,2,0;MQ=54;FQ=29.0205;PV4=0.466667,1,0,1 GT:PL 0/1:56,0,133
Scaffold_1 107755 . C A 23.0285 PASS DP=6;VDB=0.02;SGB=-0.453602;RPB=0.5;MQB=0;MQSB=0.5;BQB=0.75;MQ0F=0;AF1=0.499999;AC1=1;DP4=2,2,2,0;MQ=54;FQ=26.0258;PV4=0.466667,0.316406,0,1 GT:PL 0/1:53,0,130
Scaffold_1 107762 . C T 20.0499 PASS DP=6;VDB=0.02;SGB=-0.453602;RPB=0.5;MQB=0;MQSB=0.5;BQB=0;MQ0F=0;AF1=0.499997;AC1=1;DP4=2,2,2,0;MQ=54;FQ=23.0366;PV4=0.466667,0,0,0.180544 GT:PL 0/1:50,0,133
Scaffold_1 107884 . T G 56.0072 PASS DP=7;VDB=0.549396;SGB=-0.511536;RPB=0.607698;MQB=0.202566;MQSB=1.01283;BQB=0.810265;MQ0F=0;AF1=0.5;AC1=1;DP4=2,2,1,2;MQ=53;FQ=59.0151;PV4=1,1,0.00463828,0.0311762 GT:PL 0/1:86,0,127
Scaffold_1 107894 . A T 53.0072 PASS DP=7;VDB=0.549396;SGB=-0.511536;RPB=0.607698;MQB=0.202566;MQSB=1.01283;BQB=0.810265;MQ0F=0;AF1=0.5;AC1=1;DP4=2,2,1,2;MQ=53;FQ=56.0119;PV4=1,1,0.00463828,1 GT:PL 0/1:83,0,114
Scaffold_1 107896 . A G 53.0072 PASS DP=7;VDB=0.549396;SGB=-0.511536;RPB=0.607698;MQB=0.202566;MQSB=1.01283;BQB=0.810265;MQ0F=0;AF1=0.5;AC1=1;DP4=2,2,1,2;MQ=53;FQ=56.0149;PV4=1,0.445431,0.00463828,1 GT:PL 0/1:83,0,123
Scaffold_1 107957 . G A 25.0205 PASS DP=8;VDB=0.02;SGB=-0.453602;RPB=0.8;MQB=0;MQSB=0.6;BQB=0.6;MQ0F=0;AF1=0.499999;AC1=1;DP4=2,3,0,2;MQ=57;FQ=28.0219;PV4=1,1,0,1 GT:PL 0/1:55,0,149
Scaffold_1 107962 . G A 25.0205 PASS DP=7;VDB=0.02;SGB=-0.453602;RPB=0.8;MQB=0;MQSB=0.607698;BQB=0.8;MQ0F=0;AF1=0.499999;AC1=1;DP4=3,2,0,2;MQ=57;FQ=28.0219;PV4=0.428571,1,0,1 GT:PL 0/1:55,0,145
Scaffold_1 107980 . T G 31.0104 PASS DP=7;VDB=0.02;SGB=-0.453602;RPB=0.666667;MQB=0;MQSB=0.333333;BQB=0.333333;MQ0F=0;AF1=0.5;AC1=1;DP4=2,1,0,2;MQ=55;FQ=34.0113;PV4=0.4,1,0,1 GT:PL 0/1:61,0,90
Scaffold_1 108250 . C T 135.79 PASS DP=7;VDB=0.0424884;SGB=-0.590765;RPB=1;MQB=1;MQSB=0.861511;BQB=1;MQ0F=0.142857;AF1=1;AC1=2;DP4=0,1,3,2;MQ=55;FQ=-36.9867;PV4=1,0.352,1,1 GT:PL 1/1:168,10,0
Scaffold_1 108396 . A T 146.03 PASS DP=7;VDB=0.387746;SGB=-0.616816;RPB=1;MQB=1;MQSB=0.810265;BQB=1;MQ0F=0;AF1=0.502513;AC1=1;DP4=1,0,3,3;MQ=47;FQ=-7.77799;PV4=1,0.288066,0.0586934,0.360486 GT:PL 0/1:176,0,20
Scaffold_1 108403 . T C 121.008 PASS DP=8;VDB=0.133161;SGB=-0.590765;RPB=0.450401;MQB=0.750668;MQSB=0.833333;BQB=0.300267;MQ0F=0;AF1=0.5;AC1=1;DP4=3,0,3,2;MQ=43;FQ=48.0153;PV4=0.464286,1,0.142497,1 GT:PL 0/1:151,0,75
Scaffold_1 108413 . A T 112.008 PASS DP=8;VDB=0.138089;SGB=-0.590765;RPB=0.450401;MQB=0.750668;MQSB=0.833333;BQB=0.900802;MQ0F=0;AF1=0.5;AC1=1;DP4=3,0,3,2;MQ=43;FQ=45.0154;PV4=0.464286,1,0.142497,1 GT:PL 0/1:142,0,72
Scaffold_1 108415 . T G 119.008 PASS DP=8;VDB=0.13561;SGB=-0.590765;RPB=0.450401;MQB=0.750668;MQSB=0.833333;BQB=0.900802;MQ0F=0;AF1=0.5;AC1=1;DP4=3,0,3,2;MQ=43;FQ=52.0153;PV4=0.464286,0.240809,0.142497,1 GT:PL 0/1:149,0,79
Scaffold_1 108424 . G C 119.008 PASS DP=8;VDB=0.13561;SGB=-0.590765;RPB=0.450401;MQB=0.750668;MQSB=0.833333;BQB=0.900802;MQ0F=0;AF1=0.5;AC1=1;DP4=3,0,3,2;MQ=43;FQ=52.0153;PV4=0.464286,0.240809,0.142497,1 GT:PL 0/1:149,0,79
Scaffold_1 108427 . T C 113.008 PASS DP=8;VDB=0.13561;SGB=-0.590765;RPB=0.450401;MQB=0.750668;MQSB=0.833333;BQB=0.750668;MQ0F=0;AF1=0.5;AC1=1;DP4=3,0,3,2;MQ=43;FQ=52.0153;PV4=0.464286,0.157361,0.142497,1 GT:PL 0/1:143,0,79
Scaffold_1 108429 . G A 97.0078 PASS DP=8;VDB=0.152777;SGB=-0.556411;RPB=0.405132;MQB=0.810265;MQSB=0.8;BQB=1.01283;MQ0F=0;AF1=0.5;AC1=1;DP4=3,0,2,2;MQ=43;FQ=54.0152;PV4=0.428571,1,0.176296,1 GT:PL 0/1:127,0,81
Scaffold_1 108497 . C T 15.1417 PASS DP=11;VDB=0.02;SGB=-0.453602;RPB=0.571429;MQB=0;MQSB=0.428571;BQB=0.571429;MQ0F=0;AF1=0.499992;AC1=1;DP4=5,2,2,0;MQ=52;FQ=18.0829;PV4=1,1,0.0363905,1 GT:PL 0/1:45,0,176
Scaffold_1 108587 . T C 14.176 PASS DP=15;VDB=0.267404;SGB=-0.511536;RPB=0.201286;MQB=0.0368832;MQSB=0.428703;BQB=0.150478;MQ0F=0;AF1=0.49999;AC1=1;DP4=7,4,0,3;MQ=56;FQ=17.1004;PV4=0.192308,0.0321605,9.47485e-21,0.246557 GT:PL 0/1:44,0,255
Scaffold_1 108589 . G A 21.0411 PASS DP=16;VDB=0.28399;SGB=-0.511536;RPB=0.201286;MQB=0.0368832;MQSB=0.428703;BQB=0.374629;MQ0F=0;AF1=0.499998;AC1=1;DP4=7,4,0,3;MQ=56;FQ=24.0321;PV4=0.192308,0.172891,9.47485e-21,0.336838 GT:PL 0/1:51,0,252
Scaffold_1 108594 . T G 30.0112 PASS DP=17;VDB=0.172317;SGB=-0.556411;RPB=0.105399;MQB=0.0183156;MQSB=0.240074;BQB=0.122151;MQ0F=0;AF1=0.5;AC1=1;DP4=7,3,0,4;MQ=54;FQ=33.0172;PV4=0.0699301,0.0424079,3.74101e-05,0.184753 GT:PL 0/1:60,0,255
Scaffold_1 108603 . G T 36.0081 PASS DP=16;VDB=0.197777;SGB=-0.556411;RPB=0.298197;MQB=0.0183156;MQSB=0.30295;BQB=0.852144;MQ0F=0;AF1=0.5;AC1=1;DP4=7,3,0,4;MQ=54;FQ=39.0157;PV4=0.0699301,1,4.58603e-05,1 GT:PL 0/1:66,0,246
Scaffold_1 108604 . A C 35.0083 PASS DP=16;VDB=0.206745;SGB=-0.556411;RPB=0.298197;MQB=0.0183156;MQSB=0.30295;BQB=0.655406;MQ0F=0;AF1=0.5;AC1=1;DP4=7,3,0,4;MQ=54;FQ=38.0158;PV4=0.0699301,0.196604,4.58603e-05,1 GT:PL 0/1:65,0,255
Scaffold_1 108630 . A G 24.0241 PASS DP=15;VDB=0.297574;SGB=-0.556411;RPB=0.913931;MQB=0.0183156;MQSB=0.434598;BQB=0.960789;MQ0F=0;AF1=0.499999;AC1=1;DP4=6,4,0,4;MQ=54;FQ=27.0236;PV4=0.0849151,1,4.58603e-05,1 GT:PL 0/1:54,0,247
Scaffold_1 108656 . C T 15.1417 PASS DP=14;VDB=0.403223;SGB=-0.556411;RPB=0.558035;MQB=0.0211283;MQSB=0.0762218;BQB=0.864302;MQ0F=0;AF1=0.499992;AC1=1;DP4=8,1,0,4;MQ=53;FQ=18.0829;PV4=0.00699301,1,0.000106466,0.277393 GT:PL 0/1:45,0,190
Scaffold_1 108662 . A G 54.0072 PASS DP=13;VDB=0.0452455;SGB=-0.556411;RPB=0.924449;MQB=0.0401934;MQSB=0.200967;BQB=0.924449;MQ0F=0;AF1=0.5;AC1=1;DP4=6,1,1,3;MQ=53;FQ=57.0154;PV4=0.0878788,1,0.00460756,1 GT:PL 0/1:84,0,173
Scaffold_1 108670 . C T 12.272 PASS DP=14;VDB=0.23997;SGB=-0.556411;RPB=1;MQB=0.133734;MQSB=0.133734;BQB=0.742584;MQ0F=0;AF1=0.499984;AC1=1;DP4=8,1,1,3;MQ=54;FQ=15.1496;PV4=0.0517483,1,0.00325246,1 GT:PL 0/1:42,0,187
Scaffold_1 108686 . A C 11.3381 PASS DP=14;VDB=0.0714862;SGB=-0.511536;RPB=0.596251;MQB=0.0443614;MQSB=0.148458;BQB=0.933909;MQ0F=0;AF1=0.49998;AC1=1;DP4=8,1,0,3;MQ=54;FQ=14.1838;PV4=0.0181818,1,0.000130608,1 GT:PL 0/1:41,0,192
Scaffold_1 108690 . C T 10.42 PASS DP=15;VDB=0.0714862;SGB=-0.511536;RPB=0.496585;MQB=0.040184;MQSB=0.133734;BQB=0.496585;MQ0F=0;AF1=0.499975;AC1=1;DP4=9,1,0,3;MQ=54;FQ=13.2265;PV4=0.013986,1,5.53544e-05,1 GT:PL 0/1:40,0,199
Scaffold_1 108700 . A C 47.0072 PASS DP=15;VDB=0.0452455;SGB=-0.556411;RPB=0.527292;MQB=0.0183156;MQSB=0.122151;BQB=0.298197;MQ0F=0;AF1=0.5;AC1=1;DP4=9,1,1,3;MQ=55;FQ=50.0153;PV4=0.040959,1,0.000822246,1 GT:PL 0/1:77,0,196
Scaffold_1 118621 . A C 222.001 PASS DP=14;VDB=0.897589;SGB=-0.680642;MQSB=1;MQ0F=0;AF1=1;AC1=2;DP4=0,0,9,3;MQ=60;FQ=-62.9862 GT:PL 1/1:255,36,0
Scaffold_1 123489 . G A 37.0079 PASS DP=16;VDB=0.807392;SGB=-0.590765;RPB=0.912219;MQB=0.00920968;MQSB=0.900862;BQB=0.692463;MQ0F=0;AF1=0.5;AC1=1;DP4=8,2,3,2;MQ=52;FQ=40.0156;PV4=0.56044,1,3.80423e-06,1 GT:PL 0/1:67,0,195
Scaffold_1 123493 . T C 35.0083 PASS DP=17;VDB=0.807392;SGB=-0.590765;RPB=0.793727;MQB=0.00780539;MQSB=0.861658;BQB=0.663189;MQ0F=0;AF1=0.5;AC1=1;DP4=9,2,3,2;MQ=52;FQ=38.0158;PV4=0.546703,1,1.39101e-06,1 GT:PL 0/1:65,0,219
Scaffold_1 123524 . C T 25.0205 PASS DP=19;VDB=0.324419;SGB=-0.590765;RPB=0.998786;MQB=0.00590723;MQSB=0.19389;BQB=0.980754;MQ0F=0;AF1=0.499999;AC1=1;DP4=10,3,1,4;MQ=53;FQ=28.0219;PV4=0.0473856,1,1.87797e-07,1 GT:PL 0/1:55,0,242
Scaffold_1 123535 . C T 32.0097 PASS DP=18;VDB=0.324419;SGB=-0.590765;RPB=0.951229;MQB=0.00673795;MQSB=0.119735;BQB=0.731616;MQ0F=0;AF1=0.5;AC1=1;DP4=10,2,1,4;MQ=53;FQ=35.0165;PV4=0.0276341,1,5.10365e-07,1 GT:PL 0/1:62,0,228
Scaffold_1 123768 . T C 17.0924 PASS DP=14;VDB=0.973599;SGB=-0.511536;RPB=0.596251;MQB=0.485672;MQSB=0.372712;BQB=0.857404;MQ0F=0;AF1=0.499995;AC1=1;DP4=5,4,1,2;MQ=53;FQ=20.058;PV4=1,0.43535,0.0979717,0.0222918 GT:PL 0/1:47,0,220
Scaffold_1 124421 . C A 10.42 PASS DP=12;VDB=0.02;SGB=-0.453602;RPB=0.2;MQB=1;MQSB=0.95494;BQB=0.6;MQ0F=0;AF1=0.499975;AC1=1;DP4=5,5,0,2;MQ=60;FQ=13.2265;PV4=0.469697,1,1,0.0290607 GT:PL 0/1:40,0,249
Scaffold_1 125329 . T C 12.272 PASS DP=12;VDB=0.193383;SGB=-0.556411;RPB=0.559863;MQB=0.0559863;MQSB=0.523791;BQB=0.559863;MQ0F=0;AF1=0.499984;AC1=1;DP4=2,4,3,1;MQ=49;FQ=15.1496;PV4=0.52381,0.182004,9.32549e-05,1 GT:PL 0/1:42,0,185
Scaffold_1 125339 . C T 14.176 PASS DP=11;VDB=0.0941127;SGB=-0.511536;RPB=0.450401;MQB=0.150134;MQSB=0.868321;BQB=0.900802;MQ0F=0;AF1=0.49999;AC1=1;DP4=2,3,2,1;MQ=50;FQ=17.1004;PV4=1,0.354944,0.000757501,1 GT:PL 0/1:44,0,153
Scaffold_1 125608 . C T 17.0924 PASS DP=23;VDB=0.768087;SGB=-0.590765;RPB=0.871846;MQB=0.201704;MQSB=0.966295;BQB=0.851333;MQ0F=0.130435;AF1=0.499995;AC1=1;DP4=12,3,3,2;MQ=47;FQ=20.058;PV4=0.559791,0.186413,0.0642686,0.430688 GT:PL 0/1:47,0,252
Scaffold_1 125662 . A G 40.0075 PASS DP=19;VDB=0.0256122;SGB=-0.636426;RPB=0.690645;MQB=0.00657866;MQSB=0.673119;BQB=0.974693;MQ0F=0.157895;AF1=0.5;AC1=1;DP4=6,5,6,1;MQ=47;FQ=43.0154;PV4=0.315611,1,0.000204749,1 GT:PL 0/1:70,0,240
Scaffold_1 125670 . C T 34.0087 PASS DP=19;VDB=0.145712;SGB=-0.590765;RPB=0.863325;MQB=0.143228;MQSB=0.673119;BQB=0.942222;MQ0F=0.157895;AF1=0.5;AC1=1;DP4=9,4,3,2;MQ=47;FQ=37.016;PV4=1,1,0.0443907,0.217359 GT:PL 0/1:64,0,244
Scaffold_1 125683 . A G 40.0075 PASS DP=19;VDB=0.041536;SGB=-0.636426;RPB=0.817948;MQB=0.00229059;MQSB=0.887446;BQB=0.690645;MQ0F=0.157895;AF1=0.5;AC1=1;DP4=6,5,4,3;MQ=49;FQ=43.0154;PV4=1,1,6.02748e-07,1 GT:PL 0/1:70,0,248
Scaffold_1 125702 . C T 27.0155 PASS DP=20;VDB=0.0923317;SGB=-0.590765;RPB=0.940868;MQB=0.0924625;MQSB=0.951005;BQB=0.940868;MQ0F=0.15;AF1=0.499999;AC1=1;DP4=11,4,2,3;MQ=49;FQ=30.0194;PV4=0.289796,0.423202,0.0262366,1 GT:PL 0/1:57,0,255
Scaffold_1 126498 . T C 72.0074 PASS DP=13;VDB=0.0797974;SGB=-0.556411;RPB=0.466776;MQB=0.0211283;MQSB=1;BQB=0.997028;MQ0F=0;AF1=0.5;AC1=1;DP4=6,3,3,1;MQ=55;FQ=75.0156;PV4=1,0.460696,1.04541e-05,1 GT:PL 0/1:102,0,228
Scaffold_1 126532 . A G 60.0073 PASS DP=10;VDB=0.126715;SGB=-0.511536;RPB=0.810265;MQB=0.202566;MQSB=0.7;BQB=1.01283;MQ0F=0;AF1=0.5;AC1=1;DP4=3,1,2,1;MQ=54;FQ=63.0137;PV4=1,1,0.0073702,1 GT:PL 0/1:90,0,124
Scaffold_1 126540 . G A 71.0074 PASS DP=10;VDB=0.0797974;SGB=-0.556411;RPB=0.649731;MQB=0.0812164;MQSB=0.924584;BQB=0.406082;MQ0F=0;AF1=0.5;AC1=1;DP4=3,2,3,1;MQ=53;FQ=74.0155;PV4=1,0.0309947,0.00074214,1 GT:PL 0/1:101,0,150
Scaffold_1 126546 . T C 72.0074 PASS DP=10;VDB=0.0797974;SGB=-0.556411;RPB=0.503877;MQB=0.0559863;MQSB=0.895781;BQB=0.895781;MQ0F=0;AF1=0.5;AC1=1;DP4=3,3,3,1;MQ=54;FQ=75.0156;PV4=0.571429,1,0.000252908,1 GT:PL 0/1:102,0,155
Scaffold_1 126560 . A C 57.0073 PASS DP=9;VDB=0.126715;SGB=-0.511536;RPB=0.300267;MQB=0.150134;MQSB=0.868321;BQB=0.900802;MQ0F=0;AF1=0.5;AC1=1;DP4=2,3,2,1;MQ=55;FQ=60.0154;PV4=1,1,0.00289969,1 GT:PL 0/1:87,0,146
Scaffold_1 126565 . C T 44.0073 PASS DP=9;VDB=0.126715;SGB=-0.511536;RPB=0.405132;MQB=0.202566;MQSB=1.01283;BQB=0.607698;MQ0F=0;AF1=0.5;AC1=1;DP4=2,2,2,1;MQ=54;FQ=47.0153;PV4=1,0.13361,0.0073702,1 GT:PL 0/1:74,0,122
Scaffold_1 126596 . T C 21.0411 PASS DP=9;VDB=0.92;SGB=-0.453602;RPB=0.8;MQB=0;MQSB=0.405132;BQB=0.6;MQ0F=0;AF1=0.499998;AC1=1;DP4=1,4,2,0;MQ=55;FQ=24.0321;PV4=0.142857,1,0,0.360685 GT:PL 0/1:51,0,115
Scaffold_1 126607 . T C 18.0749 PASS DP=11;VDB=0.92;SGB=-0.453602;RPB=0.666667;MQB=0;MQSB=0.62023;BQB=0.916667;MQ0F=0;AF1=0.499996;AC1=1;DP4=2,4,2,0;MQ=56;FQ=21.0492;PV4=0.428571,1,0,0.451865 GT:PL 0/1:48,0,167
Scaffold_1 126725 . C T 47.0072 PASS DP=9;VDB=0.981488;SGB=-0.511536;RPB=0.750668;MQB=0.150134;MQSB=0.600535;BQB=0.900802;MQ0F=0;AF1=0.5;AC1=1;DP4=4,1,1,2;MQ=53;FQ=50.0153;PV4=0.464286,0.216494,0,0.0849124 GT:PL 0/1:77,0,140
Scaffold_1 126733 . A G 20.0499 PASS DP=9;VDB=0.26;SGB=-0.453602;RPB=0.333333;MQB=0;MQSB=0.450401;BQB=0.5;MQ0F=0;AF1=0.499997;AC1=1;DP4=5,1,0,2;MQ=56;FQ=23.0366;PV4=0.107143,1,0,1 GT:PL 0/1:50,0,146
Scaffold_1 126741 . C T 17.0924 PASS DP=9;VDB=0.26;SGB=-0.453602;RPB=0.857143;MQB=0.571429;MQSB=0.571429;BQB=0.428571;MQ0F=0;AF1=0.499995;AC1=1;DP4=7,0,0,2;MQ=51;FQ=20.058;PV4=0.0277778,1,0.0873882,1 GT:PL 0/1:47,0,138
Scaffold_1 126753 . A C 80.0075 PASS DP=8;VDB=0.131345;SGB=-0.556411;RPB=0.248092;MQB=0.124046;MQSB=0.666667;BQB=0.62023;MQ0F=0;AF1=0.5;AC1=1;DP4=4,0,2,2;MQ=50;FQ=54.0099;PV4=0.428571,1,9.572e-07,0.103243 GT:PL 0/1:110,0,81
Scaffold_1 126754 . G A 20.0499 PASS DP=8;VDB=0.26;SGB=-0.453602;RPB=1;MQB=0.666667;MQSB=0.666667;BQB=0.666667;MQ0F=0;AF1=0.499997;AC1=1;DP4=6,0,0,2;MQ=50;FQ=23.0366;PV4=0.0357143,1,0.121079,1 GT:PL 0/1:50,0,134
Scaffold_1 126762 . C T 20.0499 PASS DP=9;VDB=0.26;SGB=-0.453602;RPB=1;MQB=0.666667;MQSB=0.666667;BQB=0.333333;MQ0F=0;AF1=0.499997;AC1=1;DP4=6,0,0,2;MQ=50;FQ=23.0366;PV4=0.0357143,1,0.121079,1 GT:PL 0/1:50,0,121
Scaffold_1 126769 . T C 84.0076 PASS DP=10;VDB=0.124686;SGB=-0.556411;RPB=0.649731;MQB=0.0812164;MQSB=0.924584;BQB=0.406082;MQ0F=0;AF1=0.5;AC1=1;DP4=4,1,2,2;MQ=51;FQ=84.8913;PV4=0.52381,1,8.37939e-08,1 GT:PL 0/1:114,0,116
Scaffold_1 126777 . G A 87.0076 PASS DP=10;VDB=0.131345;SGB=-0.556411;RPB=0.248092;MQB=0.124046;MQSB=0.666667;BQB=0.62023;MQ0F=0;AF1=0.5;AC1=1;DP4=4,0,2,2;MQ=50;FQ=81.3768;PV4=0.428571,1,9.572e-07,1 GT:PL 0/1:117,0,109
Scaffold_1 126889 . A G 18.0749 PASS DP=18;VDB=0.0900131;SGB=-0.511536;RPB=0.721955;MQB=0.032027;MQSB=1;BQB=0.27167;MQ0F=0;AF1=0.499996;AC1=1;DP4=5,8,1,2;MQ=56;FQ=21.0492;PV4=1,1,5.18495e-08,1 GT:PL 0/1:48,0,251
Scaffold_1 127235 . G A 40.0075 PASS DP=12;VDB=0.0263438;SGB=-0.590765;RPB=0.742931;MQB=0.0297172;MQSB=0.722222;BQB=0.564628;MQ0F=0;AF1=0.5;AC1=1;DP4=1,5,1,4;MQ=48;FQ=43.0154;PV4=1,1,7.32906e-06,1 GT:PL 0/1:70,0,136
Scaffold_1 127241 . T A 36.0081 PASS DP=11;VDB=0.0256605;SGB=-0.590765;RPB=0.297172;MQB=0.0297172;MQSB=0.722222;BQB=0.742931;MQ0F=0;AF1=0.5;AC1=1;DP4=1,5,1,4;MQ=48;FQ=39.0157;PV4=1,1,7.32906e-06,1 GT:PL 0/1:66,0,127
Scaffold_1 127268 . G C 17.0924 PASS DP=10;VDB=0.0588947;SGB=-0.511536;RPB=0.150134;MQB=0.150134;MQSB=0.666667;BQB=0.900802;MQ0F=0;AF1=0.499995;AC1=1;DP4=1,4,1,2;MQ=51;FQ=20.058;PV4=1,1,0.000464294,0.0750628 GT:PL 0/1:47,0,115
Scaffold_1 127778 . C A 90.0077 PASS DP=15;VDB=0.00403653;SGB=-0.651104;RPB=0.00822975;MQB=0.00822975;MQSB=0.174566;BQB=0.332178;MQ0F=0;AF1=0.5;AC1=1;DP4=3,3,8,0;MQ=47;FQ=93.0158;PV4=0.0549451,0.0450283,0.000269991,0.246898 GT:PL 0/1:120,0,181
Scaffold_1 127819 . G A 18.0749 PASS DP=20;VDB=0.568985;SGB=-0.511536;RPB=0.97531;MQB=0.602752;MQSB=0.15118;BQB=0.945303;MQ0F=0;AF1=0.499996;AC1=1;DP4=9,7,3,0;MQ=48;FQ=21.0492;PV4=0.263158,1,0.304196,0.414596 GT:PL 0/1:48,0,255
Scaffold_1 127842 . A G 138.008 PASS DP=24;VDB=0.0520093;SGB=-0.680642;RPB=0.138097;MQB=0.00601417;MQSB=0.260035;BQB=0.969539;MQ0F=0;AF1=0.5;AC1=1;DP4=3,6,11,1;MQ=49;FQ=141.016;PV4=0.0157895,1,0.000176805,1 GT:PL 0/1:168,0,206
Scaffold_1 127864 . T A 29.0123 PASS DP=26;VDB=0.324419;SGB=-0.590765;RPB=0.473458;MQB=0.96375;MQSB=0.0389611;BQB=0.954344;MQ0F=0;AF1=0.5;AC1=1;DP4=12,8,4,1;MQ=47;FQ=32.0178;PV4=0.620553,0.468199,0.355701,1 GT:PL 0/1:59,0,255
Scaffold_1 127879 . G A 28.0137 PASS DP=25;VDB=0.324419;SGB=-0.590765;RPB=0.293758;MQB=0.932912;MQSB=0.0569786;BQB=0.997226;MQ0F=0;AF1=0.5;AC1=1;DP4=10,8,4,1;MQ=47;FQ=31.0185;PV4=0.610568,0.366499,0.350327,0.0361126 GT:PL 0/1:58,0,255
Scaffold_1 128046 . T C 10.42 PASS DP=19;VDB=0.100421;SGB=-0.556411;RPB=0.66348;MQB=0.0591947;MQSB=0.430095;BQB=0.629304;MQ0F=0;AF1=0.499975;AC1=1;DP4=7,6,1,3;MQ=48;FQ=13.2265;PV4=0.576471,1,0.0101656,1 GT:PL 0/1:40,0,249
Scaffold_1 128073 . A T 19.061 PASS DP=18;VDB=0.154358;SGB=-0.511536;RPB=0.471138;MQB=0.989637;MQSB=0.511891;BQB=0.390587;MQ0F=0;AF1=0.499997;AC1=1;DP4=6,6,1,2;MQ=44;FQ=22.0421;PV4=1,0.188538,1,1 GT:PL 0/1:49,0,240
Scaffold_1 128081 . T C 75.0075 PASS DP=17;VDB=0.00350122;SGB=-0.651104;RPB=0.792156;MQB=0.0240423;MQSB=0.490777;BQB=0.733299;MQ0F=0;AF1=0.5;AC1=1;DP4=5,3,1,7;MQ=43;FQ=78.0156;PV4=0.118881,0.0895758,0.00136547,1 GT:PL 0/1:105,0,201
Scaffold_1 128091 . A G 75.0075 PASS DP=21;VDB=0.034401;SGB=-0.636426;RPB=0.624805;MQB=0.276261;MQSB=0.622828;BQB=0.88907;MQ0F=0;AF1=0.5;AC1=1;DP4=4,10,2,5;MQ=44;FQ=78.0156;PV4=1,1,0.0821763,1 GT:PL 0/1:105,0,247
Scaffold_1 128099 . C G 11.3381 PASS DP=23;VDB=0.37344;SGB=-0.511536;RPB=0.287654;MQB=0.945479;MQSB=0.427282;BQB=0.690244;MQ0F=0;AF1=0.49998;AC1=1;DP4=7,12,0,3;MQ=45;FQ=14.1838;PV4=0.522727,1,1,0.379493 GT:PL 0/1:41,0,255
Scaffold_1 128110 . T C 17.0924 PASS DP=23;VDB=0.354794;SGB=-0.511536;RPB=0.476686;MQB=0.97784;MQSB=0.489126;BQB=0.635221;MQ0F=0;AF1=0.499995;AC1=1;DP4=6,11,0,3;MQ=45;FQ=20.058;PV4=0.521053,1,1,1 GT:PL 0/1:47,0,255
Scaffold_1 128163 . A G 11.3381 PASS DP=22;VDB=0.37344;SGB=-0.511536;RPB=0.945479;MQB=0.995434;MQSB=0.0939672;BQB=0.690244;MQ0F=0;AF1=0.49998;AC1=1;DP4=6,13,0,3;MQ=47;FQ=14.1838;PV4=0.532468,1,1,1 GT:PL 0/1:41,0,255
Scaffold_1 128173 . C T 69.0074 PASS DP=20;VDB=0.0435222;SGB=-0.616816;RPB=0.483225;MQB=0.0251772;MQSB=0.29719;BQB=1;MQ0F=0;AF1=0.5;AC1=1;DP4=5,6,1,5;MQ=51;FQ=72.0156;PV4=0.333387,1,0.00308515,1 GT:PL 0/1:99,0,252
Scaffold_1 128204 . A G 10.42 PASS DP=15;VDB=0.02;SGB=-0.453602;RPB=0.1;MQB=0;MQSB=0.760054;BQB=0.8;MQ0F=0;AF1=0.499975;AC1=1;DP4=5,5,0,2;MQ=59;FQ=13.2265;PV4=0.469697,1,0,1 GT:PL 0/1:40,0,253
Scaffold_1 131111 . C T 56.0072 PASS DP=18;VDB=0.19611;SGB=-0.616816;RPB=0.961295;MQB=0.372752;MQSB=0.995153;BQB=0.173013;MQ0F=0.0555556;AF1=0.5;AC1=1;DP4=7,5,6,0;MQ=45;FQ=59.0154;PV4=0.114146,1,0.118551,1 GT:PL 0/1:86,0,191
Scaffold_1 131145 . C T 43.0073 PASS DP=19;VDB=0.387565;SGB=-0.590765;RPB=0.983267;MQB=0.403532;MQSB=0.939413;BQB=0.859096;MQ0F=0.0526316;AF1=0.5;AC1=1;DP4=4,6,5,0;MQ=45;FQ=46.0153;PV4=0.043956,0.43917,0.146205,0.226829 GT:PL 0/1:73,0,179
Scaffold_1 131182 . G C 80.0075 PASS DP=19;VDB=0.563889;SGB=-0.662043;RPB=0.975928;MQB=0.00167033;MQSB=0.952795;BQB=0.415949;MQ0F=0.0526316;AF1=0.5;AC1=1;DP4=3,6,5,4;MQ=47;FQ=83.0157;PV4=0.637186,0.0604362,3.4264e-06,1 GT:PL 0/1:110,0,206
Scaffold_1 131186 . T C 60.0073 PASS DP=19;VDB=0.858134;SGB=-0.590765;RPB=0.686908;MQB=0.606531;MQSB=0.997919;BQB=0.764228;MQ0F=0.0526316;AF1=0.5;AC1=1;DP4=3,6,3,2;MQ=45;FQ=63.0154;PV4=0.58042,0.101371,0.304273,1 GT:PL 0/1:90,0,158
Scaffold_1 131201 . A G 35.0083 PASS DP=16;VDB=0.378927;SGB=-0.590765;RPB=0.331306;MQB=0.0389771;MQSB=0.95494;BQB=0.935451;MQ0F=0.0625;AF1=0.5;AC1=1;DP4=2,5,3,2;MQ=48;FQ=38.0158;PV4=0.558081,0.489516,0.00144196,1 GT:PL 0/1:65,0,168
Scaffold_1 131206 . G A 18.0749 PASS DP=15;VDB=0.0714862;SGB=-0.511536;RPB=0.149803;MQB=0.317132;MQSB=0.993326;BQB=0.643969;MQ0F=0.0666667;AF1=0.499996;AC1=1;DP4=4,8,3,0;MQ=50;FQ=21.0492;PV4=0.0769231,0.190259,0.247379,0.355284 GT:PL 0/1:48,0,232
Scaffold_1 131337 . C T 22.0341 PASS DP=33;VDB=0.791535;SGB=-0.590765;RPB=0.310409;MQB=0.310409;MQSB=0.933359;BQB=0.310409;MQ0F=0.030303;AF1=0.499998;AC1=1;DP4=14,9,2,3;MQ=48;FQ=25.0286;PV4=0.623932,0.0894285,0.168142,0.0075651 GT:PL 0/1:52,0,255
Scaffold_1 131343 . A G 141.008 PASS DP=33;VDB=0.686666;SGB=-0.680642;RPB=0.343271;MQB=0.00198103;MQSB=0.948568;BQB=0.833508;MQ0F=0.030303;AF1=0.5;AC1=1;DP4=9,7,7,5;MQ=49;FQ=144.016;PV4=1,0.413046,0.000117273,0.233953 GT:PL 0/1:171,0,255
Scaffold_1 131452 . T C 125.008 PASS DP=17;VDB=0.0493998;SGB=-0.616816;RPB=0.195278;MQB=0.035674;MQSB=0.99778;BQB=0.740818;MQ0F=0;AF1=0.5;AC1=1;DP4=3,5,2,4;MQ=54;FQ=128.016;PV4=1,1,0.000476928,0.132148 GT:PL 0/1:155,0,201
Scaffold_1 131601 . G C 17.0924 PASS DP=19;VDB=0.00350431;SGB=-0.616816;RPB=0.961295;MQB=0.00339922;MQSB=0.830849;BQB=0.915014;MQ0F=0.0526316;AF1=0.499995;AC1=1;DP4=5,7,1,5;MQ=51;FQ=20.058;PV4=0.600032,0.230445,6.58196e-10,1 GT:PL 0/1:47,0,255
Scaffold_1 131636 . T C 12.272 PASS DP=16;VDB=0.00923447;SGB=-0.590765;RPB=0.411112;MQB=0.011109;MQSB=0.547669;BQB=0.99115;MQ0F=0.0625;AF1=0.499984;AC1=1;DP4=5,4,1,4;MQ=48;FQ=15.1496;PV4=0.300699,0.283558,6.68646e-06,1 GT:PL 0/1:42,0,246
Scaffold_1 131740 . A T 26.0177 PASS DP=6;VDB=0.58;SGB=-0.453602;RPB=0.666667;MQB=0;MQSB=1;BQB=0.666667;MQ0F=0;AF1=0.499999;AC1=1;DP4=1,2,0,2;MQ=52;FQ=29.0202;PV4=1,1,0.00015356,1 GT:PL 0/1:56,0,98
Scaffold_1 131747 . G A 26.0177 PASS DP=6;VDB=0.58;SGB=-0.453602;RPB=0.666667;MQB=0;MQSB=0.333333;BQB=1;MQ0F=0;AF1=0.499999;AC1=1;DP4=2,1,0,2;MQ=52;FQ=29.0204;PV4=0.4,0.377662,0.00015356,1 GT:PL 0/1:56,0,108
Scaffold_1 131751 . A T 15.1417 PASS DP=6;VDB=0.58;SGB=-0.453602;RPB=0.666667;MQB=0;MQSB=0.333333;BQB=0.666667;MQ0F=0;AF1=0.499992;AC1=1;DP4=2,1,0,2;MQ=52;FQ=18.0829;PV4=0.4,0.249109,0.00015356,1 GT:PL 0/1:45,0,109
Scaffold_1 131762 . A G 23.0285 PASS DP=6;VDB=0.58;SGB=-0.453602;RPB=0;MQB=0;MQSB=0.5;BQB=0.5;MQ0F=0;AF1=0.499999;AC1=1;DP4=2,2,0,2;MQ=54;FQ=26.0258;PV4=0.466667,1,9.87481e-06,1 GT:PL 0/1:53,0,122
Scaffold_1 131782 . G A 21.0411 PASS DP=7;VDB=0.58;SGB=-0.453602;RPB=0;MQB=0;MQSB=0.607698;BQB=1;MQ0F=0;AF1=0.499998;AC1=1;DP4=3,2,0,2;MQ=55;FQ=24.0321;PV4=0.428571,1,6.41375e-07,0.255793 GT:PL 0/1:51,0,158
Scaffold_1 131786 . G A 21.0411 PASS DP=7;VDB=0.58;SGB=-0.453602;RPB=0;MQB=0;MQSB=0.607698;BQB=0.5;MQ0F=0;AF1=0.499998;AC1=1;DP4=3,2,0,2;MQ=55;FQ=24.0321;PV4=0.428571,0.0586934,6.41375e-07,0.116786 GT:PL 0/1:51,0,158
Scaffold_1 133522 . G C 10.42 PASS DP=12;VDB=0.02;SGB=-0.453602;RPB=0;MQB=1;MQSB=0.950952;BQB=0.611111;MQ0F=0;AF1=0.499975;AC1=1;DP4=6,3,0,2;MQ=60;FQ=13.2265;PV4=0.181818,0.118591,1,0.054086 GT:PL 0/1:40,0,231
Scaffold_1 134056 . C T 32.0097 PASS DP=23;VDB=0.182083;SGB=-0.616816;RPB=0.552148;MQB=0.00216277;MQSB=0.482006;BQB=0.2628;MQ0F=0;AF1=0.5;AC1=1;DP4=7,8,5,1;MQ=53;FQ=35.0165;PV4=0.177797,0.0979249,8.64244e-11,1 GT:PL 0/1:62,0,255
Scaffold_1 134068 . G A 50.0072 PASS DP=23;VDB=0.190922;SGB=-0.636426;RPB=0.635848;MQB=0.00106176;MQSB=0.817727;BQB=0.593119;MQ0F=0;AF1=0.5;AC1=1;DP4=8,7,5,2;MQ=52;FQ=53.0153;PV4=0.647833,0.1875,1.16142e-11,1 GT:PL 0/1:80,0,255
Scaffold_1 134110 . A G 13.2188 PASS DP=21;VDB=0.0643982;SGB=-0.590765;RPB=0.914947;MQB=0.00673795;MQSB=0.77073;BQB=0.998612;MQ0F=0;AF1=0.499987;AC1=1;DP4=5,7,3,2;MQ=52;FQ=16.1222;PV4=0.61991,1,3.32666e-10,1 GT:PL 0/1:43,0,255
Scaffold_1 134119 . G A 12.272 PASS DP=17;VDB=0.131345;SGB=-0.556411;RPB=0.992674;MQB=0.0144756;MQSB=0.95083;BQB=0.992674;MQ0F=0;AF1=0.499984;AC1=1;DP4=5,7,2,2;MQ=53;FQ=15.1496;PV4=1,1,7.37239e-15,1 GT:PL 0/1:42,0,255
Scaffold_1 134150 . T C 26.0177 PASS DP=14;VDB=0.915302;SGB=-0.616816;RPB=0.899815;MQB=0.0102252;MQSB=0.828239;BQB=0.695312;MQ0F=0;AF1=0.499999;AC1=1;DP4=3,4,3,3;MQ=46;FQ=29.0205;PV4=1,0.483815,2.58817e-07,0.418868 GT:PL 0/1:56,0,184
Scaffold_1 134156 . C T 21.0411 PASS DP=13;VDB=0.937711;SGB=-0.590765;RPB=1;MQB=0.0137638;MQSB=0.961166;BQB=0.187475;MQ0F=0;AF1=0.499998;AC1=1;DP4=4,4,2,3;MQ=49;FQ=24.0321;PV4=1,0.0547922,2.06679e-08,0.457003 GT:PL 0/1:51,0,216
Scaffold_1 134157 . A G 21.0411 PASS DP=13;VDB=0.940438;SGB=-0.590765;RPB=1;MQB=0.0137638;MQSB=0.961166;BQB=0.935229;MQ0F=0;AF1=0.499998;AC1=1;DP4=4,4,2,3;MQ=49;FQ=24.0321;PV4=1,0.459116,2.06679e-08,0.422916 GT:PL 0/1:51,0,200
Scaffold_1 134278 . C T 16.1143 PASS DP=13;VDB=0.164317;SGB=-0.556411;RPB=0.953497;MQB=0.0211283;MQSB=0.597928;BQB=0.651439;MQ0F=0.0769231;AF1=0.499994;AC1=1;DP4=3,6,0,4;MQ=52;FQ=19.069;PV4=0.496504,1,5.33407e-06,1 GT:PL 0/1:46,0,215
Scaffold_1 134325 . T A 14.176 PASS DP=14;VDB=0.172317;SGB=-0.556411;RPB=0.852144;MQB=0.0183156;MQSB=0.646383;BQB=0.367879;MQ0F=0.0714286;AF1=0.49999;AC1=1;DP4=3,7,0,4;MQ=53;FQ=17.1004;PV4=0.505495,1,1.74672e-06,0.058378 GT:PL 0/1:44,0,210
Scaffold_1 134327 . T C 14.176 PASS DP=14;VDB=0.172317;SGB=-0.556411;RPB=0.852144;MQB=0.0183156;MQSB=0.646383;BQB=0.960789;MQ0F=0.0714286;AF1=0.49999;AC1=1;DP4=3,7,0,4;MQ=53;FQ=17.1004;PV4=0.505495,1,1.74672e-06,0.058378 GT:PL 0/1:44,0,229
Scaffold_1 134393 . T C 19.061 PASS DP=11;VDB=0.905887;SGB=-0.511536;RPB=0.184981;MQB=0.0497871;MQSB=0.297172;BQB=0.954207;MQ0F=0;AF1=0.499997;AC1=1;DP4=6,2,0,3;MQ=54;FQ=22.0421;PV4=0.0606061,1,4.1053e-10,0.174818 GT:PL 0/1:49,0,192
Scaffold_1 135637 . G A 43.0073 PASS DP=9;VDB=0.0221621;SGB=-0.511536;RPB=0.115573;MQB=0.924584;MQSB=1;BQB=0.577865;MQ0F=0;AF1=0.5;AC1=1;DP4=4,2,3,0;MQ=60;FQ=46.0153;PV4=0.5,0.0852353,1,1 GT:PL 0/1:73,0,173
Scaffold_1 150270 . G A 72.1279 PASS DP=22;VDB=0.00324086;SGB=-0.616816;RPB=0.00996087;MQB=0.00216277;MQSB=0.0335669;BQB=0.927041;MQ0F=0.636364;AF1=1;AC1=2;DP4=4,11,6,0;MQ=22;FQ=-27.9926;PV4=0.00386997,0.226705,1,1 GT:PL 1/1:101,1,0
Scaffold_1 157434 . T C 11.3381 PASS DP=14;VDB=0.32;SGB=-0.453602;RPB=0.818182;MQB=0;MQSB=0.961166;BQB=0.454545;MQ0F=0;AF1=0.49998;AC1=1;DP4=6,5,1,1;MQ=57;FQ=14.1838;PV4=1,1,0,1 GT:PL 0/1:41,0,253
Scaffold_1 157447 . C A 24.0241 PASS DP=16;VDB=0.901652;SGB=-0.511536;RPB=0.996974;MQB=0.0368832;MQSB=0.77718;BQB=1;MQ0F=0;AF1=0.499999;AC1=1;DP4=7,4,1,2;MQ=55;FQ=27.0236;PV4=0.538462,0.348339,1.67024e-06,1 GT:PL 0/1:54,0,255
Scaffold_1 168431 . C T 22.0341 PASS DP=9;VDB=0.02;SGB=-0.453602;RPB=1;MQB=1;MQSB=0.992367;BQB=0.833333;MQ0F=0;AF1=0.499998;AC1=1;DP4=2,4,2,0;MQ=60;FQ=25.0286;PV4=0.428571,1,1,1 GT:PL 0/1:52,0,176
Scaffold_1 168983 . A T 30.0112 PASS DP=19;VDB=0.106137;SGB=-0.590765;RPB=0.700784;MQB=0.36331;MQSB=0.0482401;BQB=0.761685;MQ0F=0.105263;AF1=0.5;AC1=1;DP4=6,6,5,0;MQ=44;FQ=33.0172;PV4=0.102295,1,0.0554437,1 GT:PL 0/1:60,0,218
Scaffold_1 169002 . C G 25.0205 PASS DP=20;VDB=0.0149992;SGB=-0.556411;RPB=0.375311;MQB=0.375311;MQSB=0.0465056;BQB=0.923116;MQ0F=0.1;AF1=0.499999;AC1=1;DP4=7,8,4,0;MQ=48;FQ=28.0219;PV4=0.103199,1,0.0841657,1 GT:PL 0/1:55,0,255
Scaffold_1 169048 . G T 45.0072 PASS DP=18;VDB=0.0602347;SGB=-0.590765;RPB=0.419767;MQB=0.00673795;MQSB=0.403569;BQB=0.134585;MQ0F=0.0555556;AF1=0.5;AC1=1;DP4=5,7,4,1;MQ=53;FQ=48.0153;PV4=0.294118,0.0239541,2.05377e-06,0.496825 GT:PL 0/1:75,0,255
Scaffold_1 169080 . A G 10.42 PASS DP=16;VDB=0.951887;SGB=-0.511536;RPB=0.996974;MQB=0.0368832;MQSB=0.625784;BQB=0.693041;MQ0F=0;AF1=0.499975;AC1=1;DP4=4,7,2,1;MQ=56;FQ=13.2265;PV4=0.538462,0.13389,1.11202e-10,1 GT:PL 0/1:40,0,237
Scaffold_1 169194 . C T 15.1417 PASS DP=14;VDB=0.131345;SGB=-0.556411;RPB=0.485537;MQB=0.209611;MQSB=0.411112;BQB=0.997503;MQ0F=0.142857;AF1=0.499992;AC1=1;DP4=4,6,1,3;MQ=46;FQ=18.0829;PV4=1,1,0.0363756,1 GT:PL 0/1:45,0,209
Scaffold_1 169200 . A G 44.0073 PASS DP=15;VDB=0.28128;SGB=-0.616816;RPB=0.920266;MQB=0.0306755;MQSB=0.604728;BQB=0.828239;MQ0F=0.2;AF1=0.5;AC1=1;DP4=3,4,1,5;MQ=45;FQ=47.0153;PV4=0.559441,1,0.00350683,0.371947 GT:PL 0/1:74,0,176
Scaffold_1 169228 . G C 33.0091 PASS DP=18;VDB=0.387565;SGB=-0.590765;RPB=0.893597;MQB=0.165299;MQSB=0.0251772;BQB=0.870325;MQ0F=0.222222;AF1=0.5;AC1=1;DP4=6,6,0,5;MQ=47;FQ=36.0162;PV4=0.102295,1,0.0595446,1 GT:PL 0/1:63,0,224
Scaffold_1 169251 . C A 36.0081 PASS DP=18;VDB=0.275478;SGB=-0.616816;RPB=0.961295;MQB=0.0982563;MQSB=0.24146;BQB=0.896149;MQ0F=0.222222;AF1=0.5;AC1=1;DP4=5,7,1,5;MQ=45;FQ=39.0157;PV4=0.600032,1,0.0249095,1 GT:PL 0/1:66,0,219
Scaffold_1 169302 . G C 60.0073 PASS DP=12;VDB=0.241952;SGB=-0.616816;RPB=0.47436;MQB=0.0169414;MQSB=0.25042;BQB=0.864013;MQ0F=0.166667;AF1=0.5;AC1=1;DP4=3,3,0,6;MQ=48;FQ=63.0154;PV4=0.181818,0.170447,0.000666068,0.0939399 GT:PL 0/1:90,0,175
Scaffold_1 170082 . A G 11.3381 PASS DP=18;VDB=0.295206;SGB=-0.662043;RPB=0.894839;MQB=0.00632972;MQSB=0.605479;BQB=0.676634;MQ0F=0.388889;AF1=0.49998;AC1=1;DP4=2,4,7,2;MQ=35;FQ=14.1838;PV4=0.135664,1,1.14349e-05,1 GT:PL 0/1:41,0,138
Scaffold_1 170250 . T C 34.0087 PASS DP=26;VDB=0.0257451;SGB=-0.556411;RPB=0.561238;MQB=0.583645;MQSB=0.490125;BQB=0.999313;MQ0F=0.0384615;AF1=0.5;AC1=1;DP4=14,7,3,1;MQ=46;FQ=37.016;PV4=1,1,0.402948,1 GT:PL 0/1:64,0,255
Scaffold_1 170252 . C G 27.0155 PASS DP=25;VDB=0.026713;SGB=-0.556411;RPB=0.561238;MQB=0.583645;MQSB=0.490125;BQB=0.856815;MQ0F=0.04;AF1=0.499999;AC1=1;DP4=14,7,3,1;MQ=46;FQ=30.0194;PV4=1,0.334616,0.402948,1 GT:PL 0/1:57,0,255
Scaffold_1 170311 . A G 18.0749 PASS DP=21;VDB=0.0411825;SGB=-0.616816;RPB=0.119548;MQB=0.0393753;MQSB=0.995012;BQB=0.996161;MQ0F=0;AF1=0.499996;AC1=1;DP4=11,2,4,2;MQ=47;FQ=21.0492;PV4=0.557276,0.381254,0.00172142,0.48717 GT:PL 0/1:48,0,221
Scaffold_1 170351 . G C 12.272 PASS DP=25;VDB=0.0763459;SGB=-0.636426;RPB=0.516246;MQB=0.00853367;MQSB=0.920218;BQB=0.995888;MQ0F=0.04;AF1=0.499984;AC1=1;DP4=14,4,3,4;MQ=49;FQ=15.1496;PV4=0.15633,0.452107,0.000256853,1 GT:PL 0/1:42,0,255
Scaffold_1 170359 . A G 30.0112 PASS DP=27;VDB=0.0188473;SGB=-0.662043;RPB=0.68813;MQB=0.000487066;MQSB=0.918319;BQB=0.98895;MQ0F=0.037037;AF1=0.5;AC1=1;DP4=11,4,6,3;MQ=48;FQ=33.0172;PV4=1,0.477201,1.77731e-09,1 GT:PL 0/1:60,0,255
Scaffold_1 177174 . G T 45.513 PASS DP=4;VDB=0.646346;SGB=-0.556411;MQSB=1;MQ0F=0;AF1=1;AC1=2;DP4=0,0,1,3;MQ=60;FQ=-38.9864 GT:PL 1/1:78,12,0
Scaffold_1 188484 . C T 15.1417 PASS DP=12;VDB=0.392388;SGB=-0.511536;RPB=0.485672;MQB=0.25042;MQSB=0.506703;BQB=0.596251;MQ0F=0;AF1=0.499992;AC1=1;DP4=2,7,3,0;MQ=57;FQ=18.0829;PV4=0.0454545,0.234713,0.00972421,0.45013 GT:PL 0/1:45,0,213
Scaffold_1 188503 . G A 35.0083 PASS DP=9;VDB=0.392388;SGB=-0.511536;RPB=0.809011;MQB=0.346719;MQSB=0.649731;BQB=0.924584;MQ0F=0;AF1=0.5;AC1=1;DP4=2,4,3,0;MQ=56;FQ=38.0158;PV4=0.166667,1,0.032199,1 GT:PL 0/1:65,0,169
Scaffold_1 188504 . T C 35.0083 PASS DP=9;VDB=0.392388;SGB=-0.511536;RPB=0.809011;MQB=0.346719;MQSB=0.649731;BQB=0.809011;MQ0F=0;AF1=0.5;AC1=1;DP4=2,4,3,0;MQ=56;FQ=38.0158;PV4=0.166667,1,0.032199,1 GT:PL 0/1:65,0,172
Scaffold_1 188512 . C T 32.0097 PASS DP=9;VDB=0.392388;SGB=-0.511536;RPB=0.809011;MQB=0.346719;MQSB=0.649731;BQB=0.809011;MQ0F=0;AF1=0.5;AC1=1;DP4=2,4,3,0;MQ=56;FQ=35.0165;PV4=0.166667,0.308248,0.032199,1 GT:PL 0/1:62,0,169
Scaffold_1 188518 . C T 35.0083 PASS DP=9;VDB=0.392388;SGB=-0.511536;RPB=0.809011;MQB=0.346719;MQSB=0.649731;BQB=0.809011;MQ0F=0;AF1=0.5;AC1=1;DP4=2,4,3,0;MQ=56;FQ=38.0158;PV4=0.166667,1,0.032199,1 GT:PL 0/1:65,0,171
Scaffold_1 188534 . A T 28.0137 PASS DP=9;VDB=0.392388;SGB=-0.511536;RPB=0.809011;MQB=0.346719;MQSB=0.649731;BQB=0.809011;MQ0F=0;AF1=0.5;AC1=1;DP4=2,4,3,0;MQ=56;FQ=31.0185;PV4=0.166667,0.318301,0.032199,1 GT:PL 0/1:58,0,172
Scaffold_1 188568 . A G 45.0072 PASS DP=10;VDB=0.450604;SGB=-0.511536;RPB=0.150134;MQB=0.450401;MQSB=0.600535;BQB=0.600535;MQ0F=0;AF1=0.5;AC1=1;DP4=2,3,3,0;MQ=57;FQ=48.0153;PV4=0.196429,0.121869,0.0250075,1 GT:PL 0/1:75,0,153
Scaffold_1 188573 . T C 12.272 PASS DP=10;VDB=0.06;SGB=-0.453602;RPB=0.285714;MQB=0.5;MQSB=0.730948;BQB=1;MQ0F=0;AF1=0.499984;AC1=1;DP4=2,5,2,0;MQ=59;FQ=15.1496;PV4=0.166667,1,0.0261782,1 GT:PL 0/1:42,0,175
Scaffold_1 188579 . T A 45.0072 PASS DP=9;VDB=0.411594;SGB=-0.511536;RPB=0.150134;MQB=0.450401;MQSB=0.62023;BQB=0.900802;MQ0F=0;AF1=0.5;AC1=1;DP4=1,4,3,0;MQ=57;FQ=48.0153;PV4=0.142857,0.301461,0.0250075,1 GT:PL 0/1:75,0,140
Scaffold_1 188656 . G A 11.3381 PASS DP=13;VDB=0.0618664;SGB=-0.511536;RPB=0.597928;MQB=0.0608101;MQSB=0.953497;BQB=0.879351;MQ0F=0;AF1=0.49998;AC1=1;DP4=4,6,0,3;MQ=54;FQ=14.1838;PV4=0.496504,0.133676,0.000200535,0.197155 GT:PL 0/1:41,0,248
Scaffold_1 188657 . C A 15.1417 PASS DP=13;VDB=0.0618664;SGB=-0.511536;RPB=0.597928;MQB=0.0608101;MQSB=0.953497;BQB=0.944459;MQ0F=0;AF1=0.499992;AC1=1;DP4=4,6,0,3;MQ=54;FQ=18.0829;PV4=0.496504,0.349991,0.000200535,0.21165 GT:PL 0/1:45,0,245
Scaffold_1 188665 . T A 22.0341 PASS DP=13;VDB=0.0618664;SGB=-0.511536;RPB=0.597928;MQB=0.0608101;MQSB=0.953497;BQB=0.597928;MQ0F=0;AF1=0.499998;AC1=1;DP4=4,6,0,3;MQ=54;FQ=25.0286;PV4=0.496504,1,0.000200535,0.367989 GT:PL 0/1:52,0,234
Scaffold_1 188685 . G A 22.0341 PASS DP=14;VDB=0.0649539;SGB=-0.511536;RPB=0.839457;MQB=0.0608101;MQSB=0.953497;BQB=1;MQ0F=0;AF1=0.499998;AC1=1;DP4=4,6,0,3;MQ=54;FQ=25.0286;PV4=0.496504,1,0.000200535,1 GT:PL 0/1:52,0,255
Scaffold_1 188686 . G A 19.061 PASS DP=14;VDB=0.0681597;SGB=-0.511536;RPB=0.738577;MQB=0.0543603;MQSB=0.89683;BQB=0.782349;MQ0F=0;AF1=0.499997;AC1=1;DP4=5,6,0,3;MQ=54;FQ=22.0421;PV4=0.258242,1,9.35819e-05,1 GT:PL 0/1:49,0,255
Scaffold_1 188692 . G A 19.061 PASS DP=14;VDB=0.0681597;SGB=-0.511536;RPB=0.738577;MQB=0.0543603;MQSB=0.89683;BQB=0.896649;MQ0F=0;AF1=0.499997;AC1=1;DP4=5,6,0,3;MQ=54;FQ=22.0421;PV4=0.258242,1,9.35819e-05,1 GT:PL 0/1:49,0,255
Scaffold_1 188697 . C G 16.1143 PASS DP=15;VDB=0.074936;SGB=-0.511536;RPB=0.91051;MQB=0.0492711;MQSB=0.934728;BQB=0.556584;MQ0F=0;AF1=0.499994;AC1=1;DP4=5,7,0,3;MQ=55;FQ=19.069;PV4=0.505495,1,4.3799e-05,1 GT:PL 0/1:46,0,255
Scaffold_1 188707 . C G 53.0072 PASS DP=15;VDB=0.0298006;SGB=-0.556411;RPB=0.966484;MQB=0.0161635;MQSB=0.934728;BQB=0.926163;MQ0F=0;AF1=0.5;AC1=1;DP4=4,7,1,3;MQ=55;FQ=56.0154;PV4=1,1,2.1036e-07,1 GT:PL 0/1:83,0,255
Scaffold_1 188714 . G A 14.176 PASS DP=15;VDB=0.0785113;SGB=-0.511536;RPB=0.91051;MQB=0.0492711;MQSB=0.934728;BQB=0.93697;MQ0F=0;AF1=0.49999;AC1=1;DP4=5,7,0,3;MQ=55;FQ=17.1004;PV4=0.505495,1,4.3799e-05,1 GT:PL 0/1:44,0,255
Scaffold_1 188746 . G A 16.1143 PASS DP=16;VDB=0.102722;SGB=-0.511536;RPB=0.687289;MQB=0.0492711;MQSB=0.720273;BQB=1;MQ0F=0;AF1=0.499994;AC1=1;DP4=7,5,0,3;MQ=55;FQ=19.069;PV4=0.2,0.336098,4.3799e-05,1 GT:PL 0/1:46,0,255
Scaffold_1 188751 . G C 14.176 PASS DP=16;VDB=0.0983484;SGB=-0.511536;RPB=0.687289;MQB=0.0492711;MQSB=0.720273;BQB=0.77073;MQ0F=0;AF1=0.49999;AC1=1;DP4=7,5,0,3;MQ=55;FQ=17.1004;PV4=0.2,0.29785,4.3799e-05,1 GT:PL 0/1:44,0,255
Scaffold_1 188752 . C T 16.1143 PASS DP=16;VDB=0.102722;SGB=-0.511536;RPB=0.687289;MQB=0.0492711;MQSB=0.720273;BQB=1;MQ0F=0;AF1=0.499994;AC1=1;DP4=7,5,0,3;MQ=55;FQ=19.069;PV4=0.2,0.338193,4.3799e-05,1 GT:PL 0/1:46,0,255
Scaffold_1 194749 . G A 13.2188 PASS DP=12;VDB=0.02;SGB=-0.453602;RPB=0.222222;MQB=1;MQSB=0.950952;BQB=0.777778;MQ0F=0;AF1=0.499987;AC1=1;DP4=6,3,0,2;MQ=60;FQ=16.1222;PV4=0.181818,1,1,1 GT:PL 0/1:43,0,221
Scaffold_1 197314 . A G 37.0079 PASS DP=25;VDB=0.0693858;SGB=-0.676189;RPB=0.581364;MQB=0.00229059;MQSB=0.40625;BQB=0.951002;MQ0F=0.2;AF1=0.5;AC1=1;DP4=5,2,11,0;MQ=39;FQ=40.0156;PV4=0.137255,0.393058,1.55714e-06,1 GT:PL 0/1:67,0,152
Scaffold_1 197944 . C T 18.0749 PASS DP=28;VDB=0.682714;SGB=-0.688148;RPB=0.662021;MQB=0.0040199;MQSB=0.98313;BQB=0.966891;MQ0F=0.214286;AF1=0.499996;AC1=1;DP4=6,5,4,11;MQ=28;FQ=21.0492;PV4=0.227971,1,1.5877e-05,1 GT:PL 0/1:48,0,183
Scaffold_1 198355 . C T 33.0091 PASS DP=72;VDB=0.000375503;SGB=-0.689466;RPB=0.139875;MQB=0.0938424;MQSB=0.062543;BQB=0.889722;MQ0F=0.430556;AF1=0.5;AC1=1;DP4=19,34,8,8;MQ=19;FQ=36.0162;PV4=0.384754,0.205382,1,1 GT:PL 0/1:63,0,161
Scaffold_1 199555 . C T 65.0073 PASS DP=17;VDB=0.266887;SGB=-0.616816;RPB=0.881383;MQB=0.161503;MQSB=0.391062;BQB=0.833753;MQ0F=0.0588235;AF1=0.5;AC1=1;DP4=0,11,5,1;MQ=25;FQ=31.0176;PV4=0.000969619,0.100816,1,0.11687 GT:PL 0/1:95,0,58
Scaffold_1 199570 . C T 63.0073 PASS DP=18;VDB=0.266887;SGB=-0.616816;RPB=0.982609;MQB=0.173013;MQSB=0.281522;BQB=0.348636;MQ0F=0.0555556;AF1=0.5;AC1=1;DP4=1,11,5,1;MQ=25;FQ=52.803;PV4=0.00393234,0.0262128,1,0.217195 GT:PL 0/1:93,0,80
Scaffold_1 199603 . G T 178.042 PASS DP=18;VDB=0.173952;SGB=-0.688148;RPB=0.566419;MQB=0.185266;MQSB=0.163881;BQB=0.998247;MQ0F=0.0555556;AF1=1;AC1=2;DP4=1,2,6,9;MQ=27;FQ=-49.986;PV4=1,0.369863,1,1 GT:PL 1/1:211,23,0
Scaffold_1 199617 . G T 51.0072 PASS DP=17;VDB=0.705481;SGB=-0.590765;RPB=0.980199;MQB=0.411112;MQSB=0.411112;BQB=0.923116;MQ0F=0.0588235;AF1=0.5;AC1=1;DP4=2,7,3,2;MQ=26;FQ=34.9621;PV4=0.265734,1,1,1 GT:PL 0/1:81,0,62
Scaffold_1 199663 . G A 91.0081 PASS DP=9;VDB=0.688859;SGB=-0.616816;RPB=0.166667;MQB=0.416667;MQSB=1;BQB=0.416667;MQ0F=0;AF1=0.50005;AC1=1;DP4=1,1,6,0;MQ=43;FQ=10.4274;PV4=0.25,1,1,0.303638 GT:PL 0/1:121,0,37
Scaffold_1 199740 . G T 27.7716 PASS DP=2;VDB=0.32;SGB=-0.453602;MQ0F=0;AF1=1;AC1=2;DP4=0,0,2,0;MQ=33;FQ=-32.988 GT:PL 1/1:59,6,0
Scaffold_1 199746 . G A 138.009 PASS DP=9;VDB=0.810254;SGB=-0.636426;RPB=0.285714;MQB=0;MQSB=0.785714;BQB=0.428571;MQ0F=0;AF1=0.5001;AC1=1;DP4=2,0,5,2;MQ=46;FQ=7.80241;PV4=1,0.167592,1,1 GT:PL 0/1:168,0,34
Scaffold_1 199806 . G A 154.015 PASS DP=9;VDB=0.300288;SGB=-0.662043;MQSB=1;MQ0F=0;AF1=1;AC1=2;DP4=0,0,8,1;MQ=35;FQ=-53.9861 GT:PL 1/1:187,27,0
Scaffold_1 199840 . C T 110.645 PASS DP=10;VDB=0.39697;SGB=-0.636426;RPB=1;MQB=1;MQSB=0.916667;BQB=1;MQ0F=0;AF1=0.593902;AC1=1;DP4=0,1,6,1;MQ=35;FQ=-22.013;PV4=0.25,1,1,1 GT:PL 0/1:140,0,5
Scaffold_1 202754 . G T 13.2188 PASS DP=10;VDB=0.02;SGB=-0.453602;RPB=0.25;MQB=1;MQSB=0.952347;BQB=0.75;MQ0F=0;AF1=0.499987;AC1=1;DP4=5,3,0,2;MQ=60;FQ=16.1222;PV4=0.444444,1,1,0.0719251 GT:PL 0/1:43,0,190
Scaffold_1 209413 . T C 10.42 PASS DP=8;VDB=0.18;SGB=-0.453602;RPB=0.3;MQB=0;MQSB=0.810265;BQB=0.8;MQ0F=0;AF1=0.499975;AC1=1;DP4=2,3,1,1;MQ=54;FQ=13.2265;PV4=1,1,0.00101915,1 GT:PL 0/1:40,0,156
Scaffold_1 210710 . C G 62.0073 PASS DP=16;VDB=0.145712;SGB=-0.590765;RPB=0.146607;MQB=0.0497871;MQSB=0.939413;BQB=0.983267;MQ0F=0;AF1=0.5;AC1=1;DP4=5,5,4,1;MQ=56;FQ=65.0155;PV4=0.58042,0.439373,0.00288987,1 GT:PL 0/1:92,0,238
Scaffold_1 210714 . C T 49.0072 PASS DP=16;VDB=0.0308934;SGB=-0.556411;RPB=0.236847;MQB=0.236847;MQSB=0.992528;BQB=0.966484;MQ0F=0;AF1=0.5;AC1=1;DP4=6,5,4,0;MQ=56;FQ=52.0153;PV4=0.230769,1,0.201928,1 GT:PL 0/1:79,0,235
Scaffold_1 210734 . G A 15.1417 PASS DP=24;VDB=0.211317;SGB=-0.556411;RPB=0.999178;MQB=0.250975;MQSB=0.901627;BQB=0.992626;MQ0F=0;AF1=0.499992;AC1=1;DP4=13,6,4,0;MQ=55;FQ=18.0829;PV4=0.539243,0.233812,0.0584896,1 GT:PL 0/1:45,0,255
Scaffold_1 210737 . C A 20.0499 PASS DP=24;VDB=0.202231;SGB=-0.556411;RPB=0.985612;MQB=0.270368;MQSB=0.963102;BQB=0.491573;MQ0F=0;AF1=0.499997;AC1=1;DP4=13,5,4,0;MQ=54;FQ=23.0366;PV4=0.535202,0.380036,0.0679266,1 GT:PL 0/1:50,0,255
Scaffold_1 210745 . G A 18.0749 PASS DP=24;VDB=0.193383;SGB=-0.556411;RPB=0.913402;MQB=0.218134;MQSB=0.911488;BQB=0.999095;MQ0F=0;AF1=0.499996;AC1=1;DP4=15,3,4,0;MQ=55;FQ=21.0492;PV4=1,0.346014,0.0528858,1 GT:PL 0/1:48,0,243
Scaffold_1 210760 . C A 33.0091 PASS DP=25;VDB=0.372756;SGB=-0.556411;RPB=0.769684;MQB=0.721089;MQSB=0.991881;BQB=0.793038;MQ0F=0;AF1=0.5;AC1=1;DP4=14,4,4,0;MQ=55;FQ=36.0162;PV4=0.553794,0.446449,0.319886,0.257556 GT:PL 0/1:63,0,255
Scaffold_1 210792 . C T 27.0155 PASS DP=28;VDB=0.41821;SGB=-0.590765;RPB=0.999423;MQB=0.379156;MQSB=0.604414;BQB=0.92028;MQ0F=0;AF1=0.499999;AC1=1;DP4=17,3,5,0;MQ=55;FQ=30.0194;PV4=1,0.275988,0.0301684,1 GT:PL 0/1:57,0,255
Scaffold_1 210808 . T C 66.0074 PASS DP=30;VDB=0.0443256;SGB=-0.616816;RPB=0.99115;MQB=0.58632;MQSB=0.991465;BQB=0.83527;MQ0F=0;AF1=0.5;AC1=1;DP4=15,3,6,0;MQ=55;FQ=69.0155;PV4=0.546443,1,0.0628842,1 GT:PL 0/1:96,0,255
Scaffold_1 210811 . T C 11.3381 PASS DP=31;VDB=0.152777;SGB=-0.556411;RPB=0.352359;MQB=0.36927;MQSB=0.820082;BQB=0.806124;MQ0F=0;AF1=0.49998;AC1=1;DP4=19,5,4,0;MQ=55;FQ=14.1838;PV4=1,1,0.156318,1 GT:PL 0/1:41,0,255
Scaffold_1 210848 . A G 15.1417 PASS DP=24;VDB=0.0587288;SGB=-0.556411;RPB=0.967917;MQB=0.491573;MQSB=0.91134;BQB=0.985612;MQ0F=0;AF1=0.499992;AC1=1;DP4=13,5,4,0;MQ=55;FQ=18.0829;PV4=0.535202,1,0.00809157,1 GT:PL 0/1:45,0,255
Scaffold_1 210910 . A G 78.0075 PASS DP=14;VDB=0.859996;SGB=-0.616816;RPB=0.378331;MQB=0.0102252;MQSB=0.908075;BQB=0.695312;MQ0F=0.0714286;AF1=0.5;AC1=1;DP4=4,3,4,2;MQ=49;FQ=81.0157;PV4=1,0.483815,0.000716306,0.0101019 GT:PL 0/1:108,0,185
Scaffold_1 210933 . T C 13.2188 PASS DP=21;VDB=0.686815;SGB=-0.556411;RPB=0.803523;MQB=0.0434978;MQSB=0.651439;BQB=0.23541;MQ0F=0.047619;AF1=0.499987;AC1=1;DP4=5,11,3,1;MQ=51;FQ=16.1222;PV4=0.255315,1,0.00498235,1 GT:PL 0/1:43,0,255
Scaffold_1 210950 . G C 33.0091 PASS DP=24;VDB=0.13561;SGB=-0.590765;RPB=0.77826;MQB=0.15293;MQSB=0.305357;BQB=0.997226;MQ0F=0.0416667;AF1=0.5;AC1=1;DP4=5,13,1,4;MQ=50;FQ=36.0162;PV4=1,1,0.0329019,1 GT:PL 0/1:63,0,255
Scaffold_1 210955 . G A 78.0075 PASS DP=24;VDB=0.565216;SGB=-0.616816;RPB=0.554966;MQB=0.243713;MQSB=0.412795;BQB=0.59731;MQ0F=0.0416667;AF1=0.5;AC1=1;DP4=5,12,1,5;MQ=49;FQ=81.0157;PV4=1,0.107756,0.312325,0.00657952 GT:PL 0/1:108,0,250
Scaffold_1 210967 . T C 110.008 PASS DP=26;VDB=0.00768808;SGB=-0.670168;RPB=0.557106;MQB=0.00150344;MQSB=0.361428;BQB=0.946121;MQ0F=0.0384615;AF1=0.5;AC1=1;DP4=3,12,2,8;MQ=50;FQ=113.016;PV4=1,1,0.000315002,1 GT:PL 0/1:140,0,245
Scaffold_1 210968 . G A 71.0074 PASS DP=26;VDB=0.0231369;SGB=-0.636426;RPB=0.495508;MQB=0.0365641;MQSB=0.375947;BQB=0.959089;MQ0F=0.0384615;AF1=0.5;AC1=1;DP4=4,15,1,6;MQ=50;FQ=74.0156;PV4=1,1,0.0407967,0.374652 GT:PL 0/1:101,0,252
Scaffold_1 210975 . T A 33.0091 PASS DP=26;VDB=0.133161;SGB=-0.590765;RPB=0.219496;MQB=0.219496;MQSB=0.421207;BQB=1;MQ0F=0.0384615;AF1=0.5;AC1=1;DP4=4,15,1,4;MQ=49;FQ=36.0162;PV4=1,1,0.0397485,1 GT:PL 0/1:63,0,254
Scaffold_1 210978 . A T 143.008 PASS DP=26;VDB=0.00863719;SGB=-0.683931;RPB=0.71418;MQB=8.36483e-05;MQSB=0.375947;BQB=0.343679;MQ0F=0.0384615;AF1=0.5;AC1=1;DP4=2,11,3,10;MQ=50;FQ=146.014;PV4=1,1,2.91414e-06,1 GT:PL 0/1:173,0,206
Scaffold_1 210997 . C T 46.0072 PASS DP=32;VDB=0.599129;SGB=-0.636426;RPB=0.829433;MQB=0.0567652;MQSB=0.352866;BQB=0.656535;MQ0F=0.0625;AF1=0.5;AC1=1;DP4=4,18,1,6;MQ=50;FQ=49.0153;PV4=1,0.112432,0.0100779,1 GT:PL 0/1:76,0,255
Scaffold_1 211001 . G A 59.0073 PASS DP=33;VDB=0.0483588;SGB=-0.636426;RPB=0.770227;MQB=0.0196389;MQSB=0.342519;BQB=0.92139;MQ0F=0.0606061;AF1=0.5;AC1=1;DP4=4,15,1,6;MQ=51;FQ=62.0154;PV4=1,0.234157,0.0156663,1 GT:PL 0/1:89,0,255
Scaffold_1 211012 . G A 68.0074 PASS DP=33;VDB=0.0219768;SGB=-0.636426;RPB=0.958318;MQB=0.0446421;MQSB=0.370259;BQB=0.84341;MQ0F=0.0606061;AF1=0.5;AC1=1;DP4=4,17,1,6;MQ=50;FQ=71.0155;PV4=1,0.248081,0.0566807,1 GT:PL 0/1:98,0,255
Scaffold_1 211014 . C T 41.0074 PASS DP=33;VDB=0.0967644;SGB=-0.636426;RPB=0.603379;MQB=0.219802;MQSB=0.175181;BQB=0.326831;MQ0F=0.0606061;AF1=0.5;AC1=1;DP4=6,17,0,7;MQ=49;FQ=44.0154;PV4=0.290139,0.0645214,0.321977,1 GT:PL 0/1:71,0,255
Scaffold_1 211021 . T A 35.0083 PASS DP=28;VDB=0.324419;SGB=-0.590765;RPB=0.607319;MQB=0.389513;MQSB=0.828064;BQB=0.98262;MQ0F=0;AF1=0.5;AC1=1;DP4=4,18,0,5;MQ=49;FQ=38.0158;PV4=0.561254,0.444205,0.15217,1 GT:PL 0/1:65,0,255
Scaffold_1 211034 . C G 59.0073 PASS DP=29;VDB=0.034401;SGB=-0.636426;RPB=0.295808;MQB=0.0737603;MQSB=0.438464;BQB=0.860025;MQ0F=0;AF1=0.5;AC1=1;DP4=2,17,1,6;MQ=49;FQ=62.0154;PV4=1,0.162821,0.0594864,1 GT:PL 0/1:89,0,238
Scaffold_1 211050 . G A 20.0499 PASS DP=29;VDB=0.218338;SGB=-0.616816;RPB=0.782784;MQB=0.175258;MQSB=0.76;BQB=0.629386;MQ0F=0;AF1=0.499997;AC1=1;DP4=2,19,0,6;MQ=50;FQ=23.0366;PV4=1,0.161296,0.0826285,0.147054 GT:PL 0/1:50,0,232
Scaffold_1 211055 . A G 41.0074 PASS DP=26;VDB=0.311141;SGB=-0.616816;RPB=0.691476;MQB=0.00774797;MQSB=0.73913;BQB=0.981946;MQ0F=0;AF1=0.5;AC1=1;DP4=1,18,1,5;MQ=51;FQ=44.0154;PV4=0.43,0.458915,0.000105642,0.316205 GT:PL 0/1:71,0,229
Scaffold_1 211057 . C T 85.0076 PASS DP=27;VDB=0.144519;SGB=-0.670168;RPB=0.637628;MQB=0.000746586;MQSB=0.75;BQB=0.943008;MQ0F=0;AF1=0.5;AC1=1;DP4=1,15,1,9;MQ=50;FQ=88.0158;PV4=1,0.137332,3.21774e-05,0.317894 GT:PL 0/1:115,0,229
Scaffold_1 211068 . G T 16.1143 PASS DP=22;VDB=0.304345;SGB=-0.590765;RPB=0.978919;MQB=0.0465056;MQSB=1;BQB=0.846161;MQ0F=0;AF1=0.499994;AC1=1;DP4=1,15,0,5;MQ=51;FQ=19.069;PV4=1,1,0.00995364,1 GT:PL 0/1:46,0,221
Scaffold_1 211076 . T C 14.176 PASS DP=21;VDB=0.21346;SGB=-0.511536;RPB=0.989637;MQB=0.129812;MQSB=0.884615;BQB=0.959189;MQ0F=0;AF1=0.49999;AC1=1;DP4=2,10,0,3;MQ=52;FQ=17.1004;PV4=1,0.487889,0.0174555,1 GT:PL 0/1:44,0,235
Scaffold_1 211400 . C G 34.7659 PASS DP=6;VDB=0.0277111;SGB=-0.556411;RPB=1;MQB=1;MQSB=0.333333;BQB=1;MQ0F=0.5;AF1=1;AC1=2;DP4=1,0,1,3;MQ=25;FQ=-32.988;PV4=0.4,0.342519,1,1 GT:PL 1/1:66,6,0
Scaffold_1 211906 . C T 39.011 PASS DP=18;VDB=0.0404803;SGB=-0.590765;RPB=0.666643;MQB=0.428556;MQSB=1;BQB=0.523791;MQ0F=0.444444;AF1=0.500396;AC1=1;DP4=4,1,5,0;MQ=23;FQ=3.54704;PV4=1,1,1,1 GT:PL 0/1:69,0,28
Scaffold_1 211908 . G C 11.3402 PASS DP=18;VDB=0.235765;SGB=-0.511536;RPB=0.150134;MQB=0.600535;MQSB=1;BQB=0.900802;MQ0F=0.444444;AF1=0.50023;AC1=1;DP4=4,1,3,0;MQ=21;FQ=4.55563;PV4=1,0.252487,1,1 GT:PL 0/1:41,0,30
Scaffold_1 211917 . T A 11.3382 PASS DP=16;VDB=0.0649539;SGB=-0.511536;RPB=0.750668;MQB=0.900802;MQSB=0.833333;BQB=0.900802;MQ0F=0.375;AF1=0.499981;AC1=1;DP4=3,2,3,0;MQ=26;FQ=13.9285;PV4=0.464286,1,1,1 GT:PL 0/1:41,0,53
Scaffold_1 211971 . C A 22.0341 PASS DP=19;VDB=0.32;SGB=-0.453602;RPB=0.555556;MQB=0.333333;MQSB=0.666667;BQB=1;MQ0F=0.315789;AF1=0.499998;AC1=1;DP4=7,2,2,0;MQ=33;FQ=25.0286;PV4=1,1,1,1 GT:PL 0/1:52,0,123
Scaffold_1 221078 . C A 19.061 PASS DP=10;VDB=0.02;SGB=-0.453602;RPB=0.857143;MQB=1;MQSB=0.924584;BQB=0.857143;MQ0F=0;AF1=0.499997;AC1=1;DP4=3,4,0,2;MQ=60;FQ=22.0421;PV4=0.5,1,1,1 GT:PL 0/1:49,0,196
Scaffold_1 241417 . C G 25.0205 PASS DP=10;VDB=0.166456;SGB=-0.511536;RPB=0.274945;MQB=0.0916482;MQSB=1;BQB=0.916482;MQ0F=0;AF1=0.499999;AC1=1;DP4=6,1,3,0;MQ=53;FQ=28.0219;PV4=1,1,2.86499e-05,0.0664005 GT:PL 0/1:55,0,175
Scaffold_1 241445 . C T 21.0411 PASS DP=11;VDB=0.185719;SGB=-0.511536;RPB=0.274945;MQB=0.0916482;MQSB=1;BQB=0.916482;MQ0F=0;AF1=0.499998;AC1=1;DP4=6,1,3,0;MQ=53;FQ=24.0321;PV4=1,1,2.86499e-05,1 GT:PL 0/1:51,0,168
Scaffold_1 241451 . G A 20.0499 PASS DP=12;VDB=0.192436;SGB=-0.511536;RPB=0.760709;MQB=0.0443614;MQSB=0.7;BQB=0.540433;MQ0F=0;AF1=0.499997;AC1=1;DP4=7,2,3,0;MQ=55;FQ=23.0366;PV4=1,1,2.25538e-06,1 GT:PL 0/1:50,0,204
Scaffold_1 241461 . G A 20.0499 PASS DP=12;VDB=0.192436;SGB=-0.511536;RPB=0.760709;MQB=0.0443614;MQSB=0.7;BQB=0.707404;MQ0F=0;AF1=0.499997;AC1=1;DP4=7,2,3,0;MQ=55;FQ=23.0366;PV4=1,1,2.25538e-06,1 GT:PL 0/1:50,0,210
Scaffold_1 241465 . G A 20.0499 PASS DP=12;VDB=0.199299;SGB=-0.511536;RPB=0.962269;MQB=0.0443614;MQSB=0.7;BQB=0.707404;MQ0F=0;AF1=0.499997;AC1=1;DP4=7,2,3,0;MQ=55;FQ=23.0366;PV4=1,1,2.25538e-06,1 GT:PL 0/1:50,0,200
Scaffold_1 241474 . G A 20.0499 PASS DP=12;VDB=0.206307;SGB=-0.511536;RPB=0.983051;MQB=0.0443614;MQSB=0.7;BQB=1;MQ0F=0;AF1=0.499997;AC1=1;DP4=7,2,3,0;MQ=55;FQ=23.0366;PV4=1,1,2.25538e-06,1 GT:PL 0/1:50,0,217
Scaffold_1 241498 . C T 23.0285 PASS DP=12;VDB=0.220755;SGB=-0.511536;RPB=0.594025;MQB=0.0497871;MQSB=0.666667;BQB=0.655816;MQ0F=0;AF1=0.499999;AC1=1;DP4=6,2,3,0;MQ=54;FQ=26.0258;PV4=1,1,8.02133e-06,1 GT:PL 0/1:53,0,182
Scaffold_1 241499 . C A 20.0499 PASS DP=13;VDB=0.21346;SGB=-0.511536;RPB=0.540433;MQB=0.0443614;MQSB=0.7;BQB=0.540433;MQ0F=0;AF1=0.499997;AC1=1;DP4=7,2,3,0;MQ=55;FQ=23.0366;PV4=1,1,2.25538e-06,1 GT:PL 0/1:50,0,198
Scaffold_1 241524 . C T 13.2188 PASS DP=12;VDB=0.878371;SGB=-0.511536;RPB=0.596251;MQB=0.0443614;MQSB=0.594978;BQB=0.540433;MQ0F=0;AF1=0.499987;AC1=1;DP4=7,2,1,2;MQ=54;FQ=16.1222;PV4=0.236364,0.0938349,2.07233e-05,0.428709 GT:PL 0/1:43,0,214
Scaffold_1 241526 . T G 22.0341 PASS DP=12;VDB=0.878371;SGB=-0.511536;RPB=0.733186;MQB=0.0916482;MQSB=0.727822;BQB=0.641538;MQ0F=0;AF1=0.499998;AC1=1;DP4=5,2,1,2;MQ=53;FQ=25.0286;PV4=0.5,1,0.000167064,0.484499 GT:PL 0/1:52,0,176
Scaffold_1 241546 . T A 19.061 PASS DP=11;VDB=0.88811;SGB=-0.511536;RPB=0.979382;MQB=0.0497871;MQSB=0.643095;BQB=1;MQ0F=0;AF1=0.499997;AC1=1;DP4=6,2,1,2;MQ=54;FQ=22.0421;PV4=0.490909,0.394684,5.87183e-05,0.390145 GT:PL 0/1:49,0,194
Scaffold_1 241554 . A G 11.3381 PASS DP=13;VDB=0.88811;SGB=-0.511536;RPB=0.944459;MQB=0.040184;MQSB=0.828239;BQB=0.649117;MQ0F=0;AF1=0.49998;AC1=1;DP4=6,4,1,2;MQ=55;FQ=14.1838;PV4=0.559441,0.253988,7.33918e-06,0.475079 GT:PL 0/1:41,0,232
Scaffold_1 241557 . C T 11.3381 PASS DP=13;VDB=0.88811;SGB=-0.511536;RPB=0.944459;MQB=0.040184;MQSB=0.828239;BQB=0.400803;MQ0F=0;AF1=0.49998;AC1=1;DP4=6,4,1,2;MQ=55;FQ=14.1838;PV4=0.559441,0.0267204,7.33918e-06,0.359806 GT:PL 0/1:41,0,241
Scaffold_1 241597 . C T 12.272 PASS DP=16;VDB=0.836469;SGB=-0.556411;RPB=0.735784;MQB=0.0161635;MQSB=0.651439;BQB=0.991513;MQ0F=0;AF1=0.499984;AC1=1;DP4=7,4,1,3;MQ=53;FQ=15.1496;PV4=0.282051,0.158138,3.62064e-07,0.327575 GT:PL 0/1:42,0,255
Scaffold_1 241637 . T C 24.0241 PASS DP=19;VDB=0.828314;SGB=-0.590765;RPB=0.980754;MQB=0.00590723;MQSB=0.543806;BQB=0.995153;MQ0F=0;AF1=0.499999;AC1=1;DP4=8,5,1,4;MQ=53;FQ=27.0236;PV4=0.294118,0.295796,3.47169e-09,1 GT:PL 0/1:54,0,255
Scaffold_1 241653 . G A 25.0205 PASS DP=15;VDB=0.497461;SGB=-0.556411;RPB=0.926163;MQB=0.0161635;MQSB=0.845852;BQB=0.872525;MQ0F=0;AF1=0.499999;AC1=1;DP4=6,5,1,3;MQ=54;FQ=28.0219;PV4=0.569231,1,6.30298e-08,0.326699 GT:PL 0/1:55,0,255
Scaffold_1 242566 . C A 16.1143 PASS DP=11;VDB=0.02;SGB=-0.453602;RPB=0.25;MQB=1;MQSB=0.916482;BQB=0.75;MQ0F=0;AF1=0.499994;AC1=1;DP4=3,5,0,2;MQ=60;FQ=19.069;PV4=1,1,1,1 GT:PL 0/1:46,0,207
Scaffold_1 243268 . C T 13.2188 PASS DP=15;VDB=0.22;SGB=-0.453602;RPB=0.9375;MQB=1;MQSB=0.952347;BQB=0.75;MQ0F=0;AF1=0.499987;AC1=1;DP4=3,5,2,0;MQ=60;FQ=16.1222;PV4=0.444444,1,1,1 GT:PL 0/1:43,0,199
Scaffold_1 258675 . G T 33.0091 PASS DP=9;VDB=0.102722;SGB=-0.511536;RPB=0.810265;MQB=1.01283;BQB=0.607698;MQ0F=0;AF1=0.5;AC1=1;DP4=4,0,3,0;MQ=60;FQ=36.0145;PV4=1,0.150878,1,1 GT:PL 0/1:63,0,97
Scaffold_1 277402 . A G 26.0177 PASS DP=20;VDB=0.0686416;SGB=-0.556411;RPB=0.546074;MQB=0.011109;MQSB=0.574735;BQB=0.980199;MQ0F=0;AF1=0.499999;AC1=1;DP4=9,6,4,0;MQ=56;FQ=29.0205;PV4=0.255418,0.373001,4.33544e-05,1 GT:PL 0/1:56,0,255
Scaffold_1 277403 . G A 23.0285 PASS DP=20;VDB=0.0686416;SGB=-0.556411;RPB=0.546074;MQB=0.011109;MQSB=0.574735;BQB=0.516206;MQ0F=0;AF1=0.499999;AC1=1;DP4=9,6,4,0;MQ=56;FQ=26.0258;PV4=0.255418,0.216977,4.33544e-05,1 GT:PL 0/1:53,0,255
Scaffold_1 277420 . A T 38.0077 PASS DP=23;VDB=0.118267;SGB=-0.556411;RPB=0.335574;MQB=0.0736851;MQSB=0.735784;BQB=0.998998;MQ0F=0;AF1=0.5;AC1=1;DP4=10,7,4,0;MQ=58;FQ=41.0155;PV4=0.254971,0.362655,4.51994e-05,1 GT:PL 0/1:68,0,255
Scaffold_1 277422 . G A 41.0074 PASS DP=23;VDB=0.167399;SGB=-0.590765;RPB=0.735158;MQB=0.0304732;MQSB=0.579578;BQB=0.959099;MQ0F=0;AF1=0.5;AC1=1;DP4=9,7,5,0;MQ=57;FQ=44.0154;PV4=0.123495,0.294193,0.000358793,1 GT:PL 0/1:71,0,255
Scaffold_1 277438 . G A 49.0072 PASS DP=22;VDB=0.181959;SGB=-0.590765;RPB=0.679237;MQB=0.0347353;MQSB=0.496585;BQB=0.983003;MQ0F=0;AF1=0.5;AC1=1;DP4=7,7,5,0;MQ=56;FQ=52.0153;PV4=0.106037,0.353575,0.000801697,1 GT:PL 0/1:79,0,255
Scaffold_1 277439 . G A 54.0072 PASS DP=22;VDB=0.176043;SGB=-0.590765;RPB=0.863325;MQB=0.0374702;MQSB=0.531752;BQB=0.645028;MQ0F=0;AF1=0.5;AC1=1;DP4=7,6,5,0;MQ=56;FQ=57.0154;PV4=0.114146,0.458484,0.00120108,1 GT:PL 0/1:84,0,255
Scaffold_1 277444 . G A 52.0072 PASS DP=22;VDB=0.187998;SGB=-0.590765;RPB=0.785785;MQB=0.0347353;MQSB=0.496585;BQB=0.983003;MQ0F=0;AF1=0.5;AC1=1;DP4=7,7,5,0;MQ=56;FQ=55.0154;PV4=0.106037,0.265755,0.000801697,0.464307 GT:PL 0/1:82,0,255
Scaffold_1 277504 . G A 58.0073 PASS DP=16;VDB=0.778312;SGB=-0.590765;RPB=0.403532;MQB=0.0497871;MQSB=0.579578;BQB=0.164989;MQ0F=0;AF1=0.5;AC1=1;DP4=6,4,5,0;MQ=56;FQ=61.0154;PV4=0.230769,0.00844014,0.000931988,0.286575 GT:PL 0/1:88,0,245
Scaffold_1 277513 . G A 13.2188 PASS DP=14;VDB=0.873285;SGB=-0.511536;RPB=0.699673;MQB=0.239651;MQSB=0.826565;BQB=0.649117;MQ0F=0;AF1=0.499987;AC1=1;DP4=6,4,3,0;MQ=58;FQ=16.1222;PV4=0.496504,0.180247,0.0138079,1 GT:PL 0/1:43,0,240
Scaffold_1 277627 . A G 54.0072 PASS DP=20;VDB=0.60156;SGB=-0.590765;RPB=0.962163;MQB=0.00524752;MQSB=0.544711;BQB=1;MQ0F=0;AF1=0.5;AC1=1;DP4=9,5,1,4;MQ=55;FQ=57.0154;PV4=0.140867,1,1.03786e-11,1 GT:PL 0/1:84,0,255
Scaffold_1 277635 . A G 77.0075 PASS DP=20;VDB=0.618919;SGB=-0.590765;RPB=0.998397;MQB=0.00780539;MQSB=0.416716;BQB=0.697005;MQ0F=0;AF1=0.5;AC1=1;DP4=8,3,1,4;MQ=54;FQ=80.0157;PV4=0.105769,1,1.03332e-09,1 GT:PL 0/1:107,0,237
Scaffold_1 277644 . G A 49.0072 PASS DP=20;VDB=0.0408818;SGB=-0.556411;RPB=0.94394;MQB=0.0131237;MQSB=0.393241;BQB=0.397295;MQ0F=0;AF1=0.5;AC1=1;DP4=7,6,0,4;MQ=56;FQ=52.0153;PV4=0.102941,1,0,1 GT:PL 0/1:79,0,255
Scaffold_1 277659 . T C 47.0072 PASS DP=22;VDB=0.0550147;SGB=-0.590765;RPB=0.311297;MQB=0.00391289;MQSB=0.393893;BQB=0.999233;MQ0F=0;AF1=0.5;AC1=1;DP4=8,9,0,5;MQ=56;FQ=50.0153;PV4=0.115364,1,1.06625e-13,1 GT:PL 0/1:77,0,255
Scaffold_1 277706 . C G 45.0072 PASS DP=24;VDB=0.273436;SGB=-0.590765;RPB=0.311403;MQB=0.00471436;MQSB=0.304076;BQB=0.909156;MQ0F=0;AF1=0.5;AC1=1;DP4=8,7,0,5;MQ=55;FQ=48.0153;PV4=0.0546956,1,3.62362e-07,1 GT:PL 0/1:75,0,255
Scaffold_1 277707 . G A 44.0073 PASS DP=24;VDB=0.284843;SGB=-0.590765;RPB=0.373354;MQB=0.00427682;MQSB=0.27848;BQB=0.711124;MQ0F=0;AF1=0.5;AC1=1;DP4=9,7,0,5;MQ=55;FQ=47.0153;PV4=0.0451128,1,1.56601e-07,1 GT:PL 0/1:74,0,255
Scaffold_1 277733 . A G 11.3381 PASS DP=24;VDB=0.262259;SGB=-0.590765;RPB=0.119477;MQB=0.00334597;MQSB=0.472367;BQB=0.421207;MQ0F=0;AF1=0.49998;AC1=1;DP4=8,11,0,5;MQ=56;FQ=14.1838;PV4=0.130435,0.0328929,1.27505e-08,0.005924 GT:PL 0/1:41,0,255
Scaffold_1 278385 . G A 11.1139 PASS DP=2;VDB=0.18;SGB=-0.453602;MQ0F=0;AF1=1;AC1=2;DP4=0,0,2,0;MQ=28;FQ=-32.9882 GT:PL 1/1:42,6,0
Scaffold_1 278530 . T C 76.0184 PASS DP=6;VDB=0.0501588;SGB=-0.590765;RPB=1;MQB=1;BQB=1;MQ0F=0.166667;AF1=0.501256;AC1=1;DP4=1,0,5,0;MQ=41;FQ=-5.445;PV4=1,1,0.113123,1 GT:PL 0/1:106,0,23
Scaffold_1 278532 . C G 26.0177 PASS DP=6;VDB=0.06;SGB=-0.453602;RPB=0.375;MQB=1;BQB=1;MQ0F=0.166667;AF1=0.499999;AC1=1;DP4=4,0,2,0;MQ=41;FQ=29.0161;PV4=1,1,1,1 GT:PL 0/1:56,0,86
Scaffold_1 278564 . C A 53.0072 PASS DP=13;VDB=0.277213;SGB=-0.590765;RPB=0.584657;MQB=0.0584657;MQSB=0.45;BQB=0.760054;MQ0F=0.0769231;AF1=0.5;AC1=1;DP4=5,2,5,0;MQ=46;FQ=56.0154;PV4=0.469697,0.124008,0.00599439,1 GT:PL 0/1:83,0,186
Scaffold_1 278600 . C T 34.0087 PASS DP=15;VDB=0.243476;SGB=-0.511536;RPB=0.600245;MQB=0.989637;MQSB=0.346154;BQB=0.997399;MQ0F=0.0666667;AF1=0.5;AC1=1;DP4=11,1,2,1;MQ=44;FQ=37.016;PV4=0.371429,1,1,1 GT:PL 0/1:64,0,184
Scaffold_1 278612 . C G 40.0075 PASS DP=18;VDB=0.259298;SGB=-0.511536;RPB=0.600245;MQB=0.989637;MQSB=0.346154;BQB=1;MQ0F=0.0555556;AF1=0.5;AC1=1;DP4=11,1,2,1;MQ=44;FQ=43.0154;PV4=0.371429,0.341573,1,1 GT:PL 0/1:70,0,214
Scaffold_1 278626 . C T 37.0079 PASS DP=17;VDB=0.28399;SGB=-0.511536;RPB=0.30215;MQB=0.945009;MQSB=0.321429;BQB=0.832553;MQ0F=0;AF1=0.5;AC1=1;DP4=12,1,2,1;MQ=44;FQ=40.0156;PV4=0.35,1,1,0.237955 GT:PL 0/1:67,0,199
Scaffold_1 278647 . A C 64.0073 PASS DP=15;VDB=0.51669;SGB=-0.636426;RPB=0.40926;MQB=0.0389771;MQSB=0.3;BQB=0.584657;MQ0F=0;AF1=0.5;AC1=1;DP4=3,2,7,0;MQ=43;FQ=67.0155;PV4=0.151515,0.0729734,0.000767379,1 GT:PL 0/1:94,0,150
Scaffold_1 278678 . C T 79.0075 PASS DP=16;VDB=0.230191;SGB=-0.556411;RPB=0.651439;MQB=0.0320494;MQSB=0.470358;BQB=0.466776;MQ0F=0.0625;AF1=0.5;AC1=1;DP4=6,3,1,3;MQ=44;FQ=82.0157;PV4=0.265734,1,1,1 GT:PL 0/1:109,0,166
Scaffold_1 278692 . C T 35.0083 PASS DP=14;VDB=0.740702;SGB=-0.511536;RPB=0.594025;MQB=0.360295;MQSB=0.891517;BQB=1;MQ0F=0.0714286;AF1=0.5;AC1=1;DP4=3,5,2,1;MQ=47;FQ=38.0158;PV4=0.545455,0.428113,0.163167,1 GT:PL 0/1:65,0,213
Scaffold_1 278694 . C T 11.3381 PASS DP=14;VDB=0.88;SGB=-0.453602;RPB=0.636364;MQB=0.727273;MQSB=0.695312;BQB=0.909091;MQ0F=0.0714286;AF1=0.49998;AC1=1;DP4=5,6,1,1;MQ=47;FQ=14.1838;PV4=1,0.402446,0.397782,1 GT:PL 0/1:41,0,247
Scaffold_1 278700 . A G 12.272 PASS DP=12;VDB=0.88;SGB=-0.453602;RPB=0.875;MQB=0.5;MQSB=0.279932;BQB=0.625;MQ0F=0.0833333;AF1=0.499984;AC1=1;DP4=3,5,1,1;MQ=51;FQ=15.1496;PV4=1,1,0.216069,1 GT:PL 0/1:42,0,164
Scaffold_1 278736 . A C 15.1417 PASS DP=11;VDB=0.145389;SGB=-0.556411;RPB=0.0559863;MQB=0.0559863;MQSB=0.279932;BQB=1.00775;MQ0F=0.0909091;AF1=0.499992;AC1=1;DP4=1,5,3,1;MQ=44;FQ=18.0829;PV4=0.190476,1,0.00129767,0.123695 GT:PL 0/1:45,0,145
Scaffold_1 278739 . G A 86.0076 PASS DP=11;VDB=0.503808;SGB=-0.556411;RPB=1.01283;MQB=0.202566;MQSB=0;BQB=0.810265;MQ0F=0.0909091;AF1=0.5;AC1=1;DP4=0,3,2,2;MQ=51;FQ=44.0152;PV4=0.428571,1,0.0166859,0.289887 GT:PL 0/1:116,0,71
Scaffold_1 278754 . T C 22.0341 PASS DP=11;VDB=0.42;SGB=-0.453602;RPB=0.428571;MQB=0.571429;MQSB=0.285714;BQB=0.428571;MQ0F=0.0909091;AF1=0.499998;AC1=1;DP4=1,6,1,1;MQ=49;FQ=25.0286;PV4=0.416667,1,0.36312,1 GT:PL 0/1:52,0,135
Scaffold_1 278766 . C T 22.0341 PASS DP=8;VDB=0.42;SGB=-0.453602;RPB=0.833333;MQB=0.333333;MQSB=1;BQB=0.75;MQ0F=0.125;AF1=0.499998;AC1=1;DP4=0,6,1,1;MQ=51;FQ=25.0286;PV4=0.25,1,0.300273,1 GT:PL 0/1:52,0,109
Scaffold_1 278779 . A C 28.0137 PASS DP=8;VDB=0.42;SGB=-0.453602;RPB=0.6;MQB=0.4;MQSB=1;BQB=0.6;MQ0F=0.125;AF1=0.5;AC1=1;DP4=0,5,1,1;MQ=50;FQ=31.013;PV4=0.285714,1,0.353563,1 GT:PL 0/1:58,0,87
Scaffold_1 278818 . C A 15.1417 PASS DP=7;VDB=0.36;SGB=-0.453602;RPB=1;MQB=0;MQSB=1;BQB=0.5;MQ0F=0;AF1=0.499992;AC1=1;DP4=1,2,0,2;MQ=48;FQ=18.0829;PV4=1,0.136114,1,1 GT:PL 0/1:45,0,92
Scaffold_1 278852 . T C 63.0073 PASS DP=7;VDB=0.865924;SGB=-0.556411;RPB=0.5;MQB=0;MQSB=1;BQB=0.75;MQ0F=0;AF1=0.5;AC1=1;DP4=0,2,1,3;MQ=45;FQ=31.0171;PV4=1,0.270735,0.00459415,0.346286 GT:PL 0/1:93,0,58
Scaffold_1 278938 . T A 17.0924 PASS DP=10;VDB=0.568985;SGB=-0.511536;RPB=0.924584;MQB=0.809011;MQSB=1;BQB=0.809011;MQ0F=0;AF1=0.499995;AC1=1;DP4=1,5,0,3;MQ=43;FQ=20.058;PV4=1,0.0852353,1,1 GT:PL 0/1:47,0,123
Scaffold_1 278948 . G A 14.176 PASS DP=10;VDB=0.6;SGB=-0.453602;RPB=0.625;MQB=1;MQSB=1;BQB=0.5;MQ0F=0;AF1=0.49999;AC1=1;DP4=1,7,0,2;MQ=43;FQ=17.1004;PV4=1,1,0.443437,1 GT:PL 0/1:44,0,128
Scaffold_1 278954 . C T 49.0072 PASS DP=9;VDB=0.497461;SGB=-0.556411;RPB=0.62023;MQB=0.62023;MQSB=1;BQB=0.868321;MQ0F=0;AF1=0.5;AC1=1;DP4=1,3,0,4;MQ=40;FQ=51.8801;PV4=1,1,0.135523,1 GT:PL 0/1:79,0,94
Scaffold_1 278985 . G C 16.1143 PASS DP=6;VDB=0.22;SGB=-0.453602;RPB=0.5;MQB=0.5;MQSB=1;BQB=0.5;MQ0F=0;AF1=0.499994;AC1=1;DP4=1,3,0,2;MQ=45;FQ=19.069;PV4=1,0.0889039,1,1 GT:PL 0/1:46,0,97
Scaffold_1 278999 . C T 28.0137 PASS DP=6;VDB=0.154358;SGB=-0.511536;RPB=0.861511;MQB=0.28717;MQSB=1;BQB=0.28717;MQ0F=0;AF1=0.5;AC1=1;DP4=1,2,0,3;MQ=45;FQ=31.013;PV4=1,1,0.00516122,1 GT:PL 0/1:58,0,87
Scaffold_1 279039 . A G 58.5131 PASS DP=5;VDB=0.0122353;SGB=-0.556411;MQ0F=0;AF1=1;AC1=2;DP4=0,0,0,4;MQ=42;FQ=-38.9864 GT:PL 1/1:91,12,0
Scaffold_1 279042 . C T 14.176 PASS DP=7;VDB=0.980333;SGB=-0.511536;RPB=0.28717;MQB=0.28717;MQSB=1;BQB=0.28717;MQ0F=0;AF1=0.49999;AC1=1;DP4=1,2,1,2;MQ=43;FQ=17.0982;PV4=1,1,0.000208651,1 GT:PL 0/1:44,0,77
Scaffold_1 279049 . C T 27.0155 PASS DP=6;VDB=0.1;SGB=-0.453602;RPB=0;MQB=0;MQSB=1;BQB=0.333333;MQ0F=0;AF1=0.500004;AC1=1;DP4=1,2,0,2;MQ=38;FQ=19.6483;PV4=1,0.213946,1,0.126236 GT:PL 0/1:57,0,47
Scaffold_1 279056 . G A 20.0567 PASS DP=5;VDB=0.977838;SGB=-0.511536;RPB=1;MQB=1;MQSB=1;BQB=1;MQ0F=0;AF1=0.500789;AC1=1;DP4=0,1,1,2;MQ=32;FQ=-4.12391;PV4=1,1,0.00707821,1 GT:PL 0/1:50,0,25
Scaffold_1 279258 . C T 33.1439 PASS DP=5;VDB=0.48;SGB=-0.453602;RPB=1;MQB=1;BQB=1;MQ0F=0;AF1=0.516287;AC1=1;DP4=1,0,2,0;MQ=50;FQ=-15.1212;PV4=1,0.333333,1,1 GT:PL 0/1:63,0,12
Scaffold_1 279626 . C T 178.036 PASS DP=19;VDB=0.010128;SGB=-0.688148;RPB=0.86753;MQB=0.0452869;MQSB=1;BQB=0.86753;MQ0F=0;AF1=0.503167;AC1=1;DP4=0,3,1,14;MQ=53;FQ=-8.62639;PV4=1,0.258377,1,1 GT:PL 0/1:208,0,19
Scaffold_1 279737 . A C 40.9724 PASS DP=3;VDB=0.074936;SGB=-0.511536;MQ0F=0;AF1=1;AC1=2;DP4=0,0,0,3;MQ=29;FQ=-35.9869 GT:PL 1/1:73,9,0
Scaffold_1 279738 . C T 40.9724 PASS DP=3;VDB=0.0714862;SGB=-0.511536;MQ0F=0;AF1=1;AC1=2;DP4=0,0,0,3;MQ=29;FQ=-35.9869 GT:PL 1/1:73,9,0
Scaffold_1 279743 . T C 40.9724 PASS DP=3;VDB=0.074936;SGB=-0.511536;MQ0F=0;AF1=1;AC1=2;DP4=0,0,0,3;MQ=29;FQ=-35.9869 GT:PL 1/1:73,9,0
Scaffold_1 279745 . A G 40.9724 PASS DP=3;VDB=0.074936;SGB=-0.511536;MQ0F=0;AF1=1;AC1=2;DP4=0,0,0,3;MQ=29;FQ=-35.9869 GT:PL 1/1:73,9,0
Scaffold_1 279910 . T A 37.013 PASS DP=3;VDB=0.06;SGB=-0.453602;RPB=1;MQB=1;MQSB=1;BQB=1;MQ0F=0.333333;AF1=1;AC1=2;DP4=1,0,0,2;MQ=32;FQ=-29.9901;PV4=0.333333,1,1,1 GT:PL 1/1:67,3,0
Scaffold_1 279948 . G A 22.7872 PASS DP=2;VDB=0.06;SGB=-0.453602;MQ0F=0;AF1=1;AC1=2;DP4=0,0,0,2;MQ=40;FQ=-32.988 GT:PL 1/1:54,6,0
Scaffold_1 281037 . G A 23.5593 PASS DP=10;VDB=0.480199;SGB=-0.511536;RPB=0.0916482;MQB=0.0916482;MQSB=0.0916482;BQB=0.366593;MQ0F=0.5;AF1=1;AC1=2;DP4=0,7,3,0;MQ=18;FQ=-30.9892;PV4=0.00833333,1,1,1 GT:PL 1/1:54,4,0
Scaffold_1 281063 . T A 61.4553 PASS DP=7;VDB=0.677613;SGB=-0.590765;RPB=0;MQB=0.2;MQSB=0.202566;BQB=0.5;MQ0F=0.428571;AF1=1;AC1=2;DP4=0,2,4,1;MQ=26;FQ=-33.9875;PV4=0.142857,1,1,1 GT:PL 1/1:93,7,0
Scaffold_1 281497 . A C 65.1255 PASS DP=5;VDB=0.243476;SGB=-0.511536;RPB=1;MQB=1;MQSB=0.5;BQB=1;MQ0F=0.2;AF1=1;AC1=2;DP4=1,0,1,2;MQ=52;FQ=-31.9885;PV4=1,0.333333,1,0.333333 GT:PL 1/1:96,5,0
Scaffold_1 281514 . T A 22.0354 PASS DP=5;VDB=0.1;SGB=-0.453602;RPB=0;MQB=0;MQSB=1;BQB=0;MQ0F=0.2;AF1=0.500156;AC1=1;DP4=2,0,1,1;MQ=47;FQ=6.1717;PV4=1,0.106833,1,1 GT:PL 0/1:52,0,32
Scaffold_1 281539 . T G 97.0121 PASS DP=6;VDB=0.996515;SGB=-0.556411;RPB=1;MQB=0;MQSB=0.625;BQB=0.75;MQ0F=0.166667;AF1=0.500499;AC1=1;DP4=2,0,2,2;MQ=49;FQ=3.01767;PV4=0.466667,0.270735,1,0.0119042 GT:PL 0/1:127,0,27
Scaffold_1 281550 . A T 36.0094 PASS DP=5;VDB=0.06;SGB=-0.453602;RPB=0;MQB=0;MQSB=1;BQB=0.5;MQ0F=0.2;AF1=0.500158;AC1=1;DP4=2,0,1,1;MQ=42;FQ=6.20321;PV4=1,0.211325,1,0.211325 GT:PL 0/1:66,0,32
Scaffold_1 281790 . C T 47.0124 PASS DP=5;VDB=0.327477;SGB=-0.511536;RPB=0.666667;MQB=0;MQSB=0;BQB=0.5;MQ0F=0.4;AF1=1;AC1=2;DP4=2,0,0,3;MQ=27;FQ=-29.9901;PV4=0.1,1,1,0.247513 GT:PL 1/1:77,3,0
Scaffold_1 282806 . A G 32.7667 PASS DP=3;VDB=0.78;SGB=-0.453602;MQ0F=0;AF1=1;AC1=2;DP4=0,0,2,0;MQ=42;FQ=-32.988 GT:PL 1/1:64,6,0
Scaffold_1 282826 . T G 110.133 PASS DP=7;VDB=0.175312;SGB=-0.616816;MQSB=1;MQ0F=0;AF1=1;AC1=2;DP4=0,0,4,2;MQ=32;FQ=-44.9861 GT:PL 1/1:143,18,0
Scaffold_1 282827 . C T 107.133 PASS DP=7;VDB=0.179808;SGB=-0.616816;MQSB=1;MQ0F=0;AF1=1;AC1=2;DP4=0,0,4,2;MQ=32;FQ=-44.9861 GT:PL 1/1:140,18,0
Scaffold_1 282831 . G A 18.0749 PASS DP=7;VDB=0.78;SGB=-0.453602;RPB=0;MQB=1;MQSB=1;BQB=0.375;MQ0F=0;AF1=0.499996;AC1=1;DP4=2,2,2,0;MQ=32;FQ=21.0406;PV4=0.466667,1,1,1 GT:PL 0/1:48,0,75
Scaffold_1 282862 . G A 18.0749 PASS DP=7;VDB=0.8;SGB=-0.453602;RPB=0;MQB=1;MQSB=1;BQB=0.5;MQ0F=0;AF1=0.499996;AC1=1;DP4=2,2,2,0;MQ=32;FQ=21.0406;PV4=0.466667,1,1,0.0889039 GT:PL 0/1:48,0,75
Scaffold_1 282866 . T A 45.0073 PASS DP=7;VDB=0.00671048;SGB=-0.556411;RPB=0;MQB=1;MQSB=1;BQB=0.75;MQ0F=0;AF1=0.500004;AC1=1;DP4=2,0,2,2;MQ=32;FQ=21.0406;PV4=0.466667,0.163273,0.33378,1 GT:PL 0/1:75,0,48
Scaffold_1 282899 . G A 11.3381 PASS DP=7;VDB=0.732596;SGB=-0.511536;RPB=0.607698;MQB=1.01283;MQSB=0.8;BQB=0.810265;MQ0F=0;AF1=0.49998;AC1=1;DP4=4,0,1,2;MQ=28;FQ=14.1423;PV4=0.142857,1,0.322477,0.142795 GT:PL 0/1:41,0,61
Scaffold_1 283072 . G A 13.943 PASS DP=2;VDB=0.7;SGB=-0.453602;MQ0F=0;AF1=1;AC1=2;DP4=0,0,0,2;MQ=29;FQ=-32.9881 GT:PL 1/1:45,6,0
Scaffold_1 283173 . C T 54.9722 PASS DP=3;VDB=0.0785113;SGB=-0.511536;MQ0F=0;AF1=1;AC1=2;DP4=0,0,0,3;MQ=35;FQ=-35.9869 GT:PL 1/1:87,9,0
Scaffold_1 283220 . G A 54.9722 PASS DP=3;VDB=0.0860477;SGB=-0.511536;MQ0F=0;AF1=1;AC1=2;DP4=0,0,0,3;MQ=35;FQ=-35.9869 GT:PL 1/1:87,9,0
Scaffold_1 283268 . C G 17.1058 PASS DP=5;VDB=0.18;SGB=-0.453602;RPB=0;MQB=0;BQB=0.5;MQ0F=0;AF1=0.501577;AC1=1;DP4=0,2,0,2;MQ=26;FQ=-6.19268;PV4=1,1,1,0.18573 GT:PL 0/1:47,0,22
Scaffold_1 285472 . G A 11.1139 PASS DP=7;VDB=0.288695;SGB=-0.590765;RPB=0.8;MQB=0.4;BQB=0.6;MQ0F=0;AF1=1;AC1=2;DP4=2,0,5,0;MQ=14;FQ=-32.9882;PV4=1,0.211033,1,1 GT:PL 1/1:42,6,0
Scaffold_1 285492 . C T 14.1761 PASS DP=10;VDB=0.187998;SGB=-0.590765;RPB=0.89338;MQB=0.974597;BQB=0.406082;MQ0F=0;AF1=0.500003;AC1=1;DP4=4,0,5,0;MQ=21;FQ=13.6666;PV4=1,1,0.410057,1 GT:PL 0/1:44,0,43
Scaffold_1 285609 . C T 50.0072 PASS DP=7;VDB=0.714437;SGB=-0.556411;RPB=0.25;MQB=0.875;MQSB=1;BQB=0.75;MQ0F=0;AF1=0.500003;AC1=1;DP4=2,0,3,1;MQ=38;FQ=22.0387;PV4=1,1,0.393559,1 GT:PL 0/1:80,0,49
Scaffold_1 285681 . G A 12.272 PASS DP=17;VDB=0.0211291;SGB=-0.616816;RPB=0.153355;MQB=0.301194;MQSB=0.0657285;BQB=0.135054;MQ0F=0;AF1=0.499984;AC1=1;DP4=4,4,1,5;MQ=31;FQ=15.1496;PV4=0.300699,0.0380838,0.0741795,0.0987417 GT:PL 0/1:42,0,166
Scaffold_1 285707 . C T 116.008 PASS DP=26;VDB=0.587356;SGB=-0.651104;RPB=0.00569613;MQB=0.728422;MQSB=0.0886112;BQB=0.998127;MQ0F=0;AF1=0.5;AC1=1;DP4=9,7,4,4;MQ=30;FQ=118.999;PV4=1,1,1,1 GT:PL 0/1:146,0,170
Scaffold_1 285708 . G A 85.0076 PASS DP=26;VDB=0.000477074;SGB=-0.686358;RPB=0.0787876;MQB=0.908075;MQSB=0.0886112;BQB=0.781252;MQ0F=0;AF1=0.5;AC1=1;DP4=6,4,7,7;MQ=30;FQ=88.0157;PV4=0.69683,0.0839726,0.278042,0.438663 GT:PL 0/1:115,0,167
Scaffold_1 285712 . A T 100.008 PASS DP=27;VDB=0.594311;SGB=-0.651104;RPB=0.00569613;MQB=0.728422;MQSB=0.0886112;BQB=0.813248;MQ0F=0;AF1=0.5;AC1=1;DP4=9,7,4,4;MQ=30;FQ=103.016;PV4=1,1,1,1 GT:PL 0/1:130,0,174
Scaffold_1 285798 . C T 68.0074 PASS DP=32;VDB=0.0264851;SGB=-0.636426;RPB=0.639909;MQB=0.0205469;MQSB=0.846161;BQB=0.639909;MQ0F=0;AF1=0.5;AC1=1;DP4=16,8,4,3;MQ=29;FQ=71.0155;PV4=0.675719,0.170486,1,1 GT:PL 0/1:98,0,192
Scaffold_1 285799 . G A 11.3381 PASS DP=32;VDB=0.184775;SGB=-0.556411;RPB=0.319791;MQB=0.163246;MQSB=0.95433;BQB=0.912967;MQ0F=0;AF1=0.49998;AC1=1;DP4=15,9,2,2;MQ=28;FQ=14.1838;PV4=1,1,1,1 GT:PL 0/1:41,0,200
Scaffold_1 285804 . T G 34.0087 PASS DP=30;VDB=0.324419;SGB=-0.590765;RPB=0.999583;MQB=0.246186;MQSB=0.998948;BQB=0.921579;MQ0F=0;AF1=0.5;AC1=1;DP4=15,9,4,1;MQ=29;FQ=37.016;PV4=0.632815,1,1,0.441547 GT:PL 0/1:64,0,224
Scaffold_1 285829 . T C 14.176 PASS DP=26;VDB=0.187998;SGB=-0.590765;RPB=0.97357;MQB=0.511891;MQSB=0.980199;BQB=0.679237;MQ0F=0;AF1=0.49999;AC1=1;DP4=11,3,4,1;MQ=28;FQ=17.1004;PV4=1,1,0.167379,0.372045 GT:PL 0/1:44,0,166
Scaffold_1 285870 . A G 16.1143 PASS DP=13;VDB=0.348672;SGB=-0.616816;RPB=0.372712;MQB=0.372712;MQSB=0.594978;BQB=0.864013;MQ0F=0;AF1=0.499994;AC1=1;DP4=4,2,4,2;MQ=24;FQ=19.069;PV4=1,0.294295,0.0736118,1 GT:PL 0/1:46,0,99
Scaffold_1 285956 . T C 49.0209 PASS DP=10;VDB=0.176043;SGB=-0.590765;RPB=0.761877;MQB=0.142852;MQSB=0.375;BQB=0.666643;MQ0F=0.1;AF1=0.501582;AC1=1;DP4=2,3,0,5;MQ=24;FQ=-6.18227;PV4=0.444444,0.123454,1,1 GT:PL 0/1:79,0,22
Scaffold_1 286102 . C T 27.0155 PASS DP=26;VDB=0.138089;SGB=-0.590765;RPB=0.901492;MQB=0.50373;MQSB=0.991618;BQB=0.995249;MQ0F=0.0384615;AF1=0.499999;AC1=1;DP4=13,8,2,3;MQ=26;FQ=30.0194;PV4=0.619565,0.329063,1,0.335782 GT:PL 0/1:57,0,186
Scaffold_1 286132 . C T 60.0073 PASS DP=27;VDB=0.192198;SGB=-0.670168;RPB=0.603988;MQB=0.454837;MQSB=0.985523;BQB=0.679751;MQ0F=0.0740741;AF1=0.5;AC1=1;DP4=10,7,5,5;MQ=28;FQ=63.0154;PV4=0.706331,0.0440432,0.139347,1 GT:PL 0/1:90,0,227
Scaffold_1 286154 . G A 221.999 PASS DP=26;VDB=0.00567211;SGB=-0.692831;RPB=1;MQB=1;MQSB=0.930818;BQB=1;MQ0F=0.0769231;AF1=1;AC1=2;DP4=0,1,17,7;MQ=28;FQ=-78.9864;PV4=0.32,1,0.499001,1 GT:PL 1/1:255,52,0
Scaffold_1 286155 . C T 169.009 PASS DP=26;VDB=0.10895;SGB=-0.689466;RPB=0.960728;MQB=0.594978;MQSB=0.930818;BQB=0.934533;MQ0F=0.0769231;AF1=0.5;AC1=1;DP4=5,4,12,4;MQ=28;FQ=58.0154;PV4=0.394217,0.289952,1,1 GT:PL 0/1:199,0,85
Scaffold_1 286163 . A C 221.999 PASS DP=25;VDB=0.007837;SGB=-0.692831;MQSB=0.829029;MQ0F=0.08;AF1=1;AC1=2;DP4=0,0,16,8;MQ=29;FQ=-98.9866 GT:PL 1/1:255,72,0
Scaffold_1 286212 . A G 30.0112 PASS DP=24;VDB=0.0343724;SGB=-0.556411;RPB=0.803523;MQB=0.126994;MQSB=0.651439;BQB=0.990006;MQ0F=0.0833333;AF1=0.5;AC1=1;DP4=8,8,4,0;MQ=27;FQ=33.0172;PV4=0.116615,1,1,1 GT:PL 0/1:60,0,155
Scaffold_1 286386 . T C 15.1417 PASS DP=14;VDB=0.206745;SGB=-0.556411;RPB=0.266468;MQB=0.852144;MQSB=0.5;BQB=0.367879;MQ0F=0.0714286;AF1=0.499992;AC1=1;DP4=2,8,0,4;MQ=24;FQ=18.0829;PV4=1,1,1,1 GT:PL 0/1:45,0,101
Scaffold_1 286427 . C T 60.0073 PASS DP=21;VDB=0.594064;SGB=-0.670168;RPB=0.982301;MQB=0.993592;MQSB=0.238312;BQB=0.955315;MQ0F=0.0952381;AF1=0.5;AC1=1;DP4=2,8,1,9;MQ=24;FQ=59.4764;PV4=1,1,0.49386,1 GT:PL 0/1:90,0,89
Scaffold_1 286457 . G A 14.176 PASS DP=19;VDB=0.292086;SGB=-0.556411;RPB=0.995012;MQB=0.278037;MQSB=0.535261;BQB=0.606531;MQ0F=0.157895;AF1=0.49999;AC1=1;DP4=3,12,0,4;MQ=22;FQ=17.1003;PV4=1,1,1,1 GT:PL 0/1:44,0,90
Scaffold_1 286471 . A T 19.061 PASS DP=17;VDB=0.281254;SGB=-0.556411;RPB=0.823732;MQB=0.284674;MQSB=0.533333;BQB=0.960728;MQ0F=0.176471;AF1=0.499997;AC1=1;DP4=2,11,0,4;MQ=22;FQ=22.0394;PV4=1,1,1,1 GT:PL 0/1:49,0,81
Scaffold_1 286508 . T C 39.0081 PASS DP=11;VDB=0.0389458;SGB=-0.616816;RPB=0.891517;MQB=0.8618;MQSB=0.5;BQB=0.297172;MQ0F=0.181818;AF1=0.500063;AC1=1;DP4=1,4,1,5;MQ=22;FQ=9.52617;PV4=1,1,1,1 GT:PL 0/1:69,0,36
Scaffold_1 286529 . C T 28.0138 PASS DP=11;VDB=0.0672958;SGB=-0.590765;RPB=0.742931;MQB=0.891517;MQSB=0.5;BQB=0.950952;MQ0F=0.181818;AF1=0.500006;AC1=1;DP4=1,5,1,4;MQ=22;FQ=18.8067;PV4=1,1,1,0.186802 GT:PL 0/1:58,0,46
Scaffold_1 286781 . C T 11.3057 PASS DP=4;VDB=0.148533;SGB=-0.511536;MQSB=1;MQ0F=0.25;AF1=1;AC1=2;DP4=0,0,1,2;MQ=21;FQ=-35.9871 GT:PL 1/1:43,9,0
Scaffold_1 286786 . T C 17.2105 PASS DP=4;VDB=0.7;SGB=-0.453602;RPB=1;MQB=1;MQSB=1;BQB=1;MQ0F=0.25;AF1=1;AC1=2;DP4=0,1,1,1;MQ=23;FQ=-27.9927;PV4=1,0.333333,1,0.333333 GT:PL 1/1:46,1,0
Scaffold_1 286798 . A G 21.1583 PASS DP=4;VDB=0.568985;SGB=-0.511536;RPB=1;MQB=1;MQSB=1;BQB=1;MQ0F=0.25;AF1=1;AC1=2;DP4=0,1,1,2;MQ=20;FQ=-31.9885;PV4=1,0.435417,1,0.333333 GT:PL 1/1:52,5,0
Scaffold_1 286801 . C T 13.9463 PASS DP=4;VDB=0.68;SGB=-0.453602;RPB=0;MQB=0;MQSB=1;BQB=0.75;MQ0F=0.25;AF1=1;AC1=2;DP4=0,2,1,1;MQ=20;FQ=-26.9947;PV4=1,1,1,0.211325 GT:PL 0/1:42,0,0
Scaffold_1 286813 . A G 24.5565 PASS DP=5;VDB=0.740702;SGB=-0.511536;RPB=0;MQB=0;MQSB=0;BQB=1;MQ0F=0.2;AF1=1;AC1=2;DP4=0,2,2,1;MQ=32;FQ=-28.9912;PV4=0.4,1,1,0.247513 GT:PL 1/1:54,2,0
Scaffold_1 287218 . T C 100.193 PASS DP=6;VDB=0.187998;SGB=-0.590765;RPB=1;MQB=1;MQSB=0.625;BQB=1;MQ0F=0;AF1=1;AC1=2;DP4=1,0,1,4;MQ=54;FQ=-34.9872;PV4=0.333333,0.382343,1,1 GT:PL 1/1:132,8,0
Scaffold_1 287227 . T C 96.7652 PASS DP=5;VDB=0.0127498;SGB=-0.556411;RPB=1;MQB=1;MQSB=0.666667;BQB=1;MQ0F=0;AF1=1;AC1=2;DP4=1,0,1,3;MQ=53;FQ=-32.988;PV4=0.4,0.247513,1,1 GT:PL 1/1:128,6,0
Scaffold_1 287435 . A G 13.2514 PASS DP=6;VDB=0.951887;SGB=-0.511536;RPB=0.861511;MQB=0.861511;MQSB=1;BQB=0.861511;MQ0F=0;AF1=0.503981;AC1=1;DP4=3,0,2,1;MQ=20;FQ=-9.51426;PV4=1,1,1,0.394525 GT:PL 0/1:43,0,18
Scaffold_1 287438 . G A 16.1978 PASS DP=6;VDB=0.954319;SGB=-0.511536;RPB=1;MQB=1;MQSB=1;BQB=0.666667;MQ0F=0;AF1=0.510149;AC1=1;DP4=2,0,2,1;MQ=22;FQ=-13.2012;PV4=1,1,1,0.159305 GT:PL 0/1:46,0,14
Scaffold_1 287486 . A C 41.1423 PASS DP=6;VDB=0.184775;SGB=-0.556411;RPB=0.25;MQB=0.5;MQSB=0.5;BQB=0.125;MQ0F=0;AF1=0.516288;AC1=1;DP4=2,0,2,2;MQ=23;FQ=-15.1212;PV4=0.466667,1,1,0.270735 GT:PL 0/1:71,0,12
Scaffold_1 287488 . C T 41.1423 PASS DP=6;VDB=0.176409;SGB=-0.556411;RPB=0.25;MQB=0.5;MQSB=0.5;BQB=0.875;MQ0F=0;AF1=0.516288;AC1=1;DP4=2,0,2,2;MQ=23;FQ=-15.1212;PV4=0.466667,0.324994,1,0.270735 GT:PL 0/1:71,0,12
Scaffold_1 287495 . A T 18.0749 PASS DP=7;VDB=0.28399;SGB=-0.511536;RPB=1.01283;MQB=1.01283;MQSB=0.4;BQB=0.810265;MQ0F=0;AF1=0.499996;AC1=1;DP4=3,1,2,1;MQ=31;FQ=20.8385;PV4=1,1,0.407882,1 GT:PL 0/1:48,0,61
Scaffold_1 287698 . T C 45.0072 PASS DP=9;VDB=0.421281;SGB=-0.511536;RPB=0.607698;MQB=0.202566;MQSB=0.6;BQB=0.810265;MQ0F=0;AF1=0.500002;AC1=1;DP4=0,4,2,1;MQ=36;FQ=24.015;PV4=0.142857,0.345516,1,1 GT:PL 0/1:75,0,51
Scaffold_1 287704 . G T 57.0073 PASS DP=9;VDB=0.411594;SGB=-0.511536;RPB=0.750668;MQB=0.150134;MQSB=0.5;BQB=0.900802;MQ0F=0;AF1=0.5;AC1=1;DP4=0,5,2,1;MQ=35;FQ=39.9724;PV4=0.107143,1,1,1 GT:PL 0/1:87,0,67
Scaffold_1 287708 . A T 12.272 PASS DP=9;VDB=0.0308934;SGB=-0.556411;RPB=0.89338;MQB=0.89338;MQSB=0.428571;BQB=0.730948;MQ0F=0;AF1=0.499984;AC1=1;DP4=2,3,0,4;MQ=33;FQ=15.1495;PV4=0.444444,0.309674,0.249057,1 GT:PL 0/1:42,0,90
Scaffold_1 287710 . G C 16.1143 PASS DP=9;VDB=0.0312982;SGB=-0.511536;RPB=0.809011;MQB=0.924584;MQSB=0.428571;BQB=0.809011;MQ0F=0;AF1=0.499994;AC1=1;DP4=2,4,0,3;MQ=33;FQ=19.069;PV4=0.5,1,0.389821,1 GT:PL 0/1:46,0,109
Scaffold_1 287737 . T G 16.1143 PASS DP=9;VDB=0.0330887;SGB=-0.511536;RPB=0.900802;MQB=0.900802;MQSB=0.5;BQB=0.900802;MQ0F=0;AF1=0.499994;AC1=1;DP4=2,3,0,3;MQ=35;FQ=19.069;PV4=0.464286,0.490044,0.270117,1 GT:PL 0/1:46,0,107
Scaffold_1 287771 . C G 77.0075 PASS DP=10;VDB=0.885471;SGB=-0.556411;RPB=0.974597;MQB=0.0812164;MQSB=0.714286;BQB=0.89338;MQ0F=0;AF1=0.5;AC1=1;DP4=0,5,2,2;MQ=39;FQ=38.0155;PV4=0.166667,0.146176,1,0.0399052 GT:PL 0/1:107,0,65
Scaffold_1 287795 . A C 22.0341 PASS DP=8;VDB=0.7;SGB=-0.453602;RPB=0;MQB=0;BQB=0.166667;MQ0F=0;AF1=0.499998;AC1=1;DP4=0,6,0,2;MQ=36;FQ=24.8596;PV4=1,1,1,1 GT:PL 0/1:52,0,66
Scaffold_1 288142 . G A 20.8005 PASS DP=3;VDB=0.32;SGB=-0.453602;MQSB=1;MQ0F=0;AF1=1;AC1=2;DP4=0,0,1,1;MQ=46;FQ=-32.988 GT:PL 1/1:52,6,0
Scaffold_1 288915 . G C 10.42 PASS DP=11;VDB=0.02;SGB=-0.453602;RPB=0.888889;MQB=0.222222;MQSB=0.920044;BQB=0.666667;MQ0F=0;AF1=0.499975;AC1=1;DP4=6,3,2,0;MQ=54;FQ=13.2265;PV4=1,1,0.0133952,1 GT:PL 0/1:40,0,220
Scaffold_1 288920 . G T 37.0079 PASS DP=11;VDB=0.102722;SGB=-0.511536;RPB=0.532481;MQB=0.0497871;MQSB=0.920044;BQB=0.954207;MQ0F=0;AF1=0.5;AC1=1;DP4=5,3,3,0;MQ=54;FQ=40.0156;PV4=0.490909,1,7.86142e-05,0.336629 GT:PL 0/1:67,0,216
Scaffold_1 289096 . A G 62.0073 PASS DP=9;VDB=0.988087;SGB=-0.590765;RPB=0.600535;MQB=0.300267;MQSB=0.916667;BQB=0.900802;MQ0F=0;AF1=0.5;AC1=1;DP4=2,1,4,1;MQ=47;FQ=63.5601;PV4=1,0.299623,0.032028,0.464824 GT:PL 0/1:92,0,96
Scaffold_1 289188 . A G 84.0076 PASS DP=13;VDB=0.640281;SGB=-0.590765;RPB=0.253351;MQB=0.506703;MQSB=0.760054;BQB=0.838008;MQ0F=0;AF1=0.5;AC1=1;DP4=1,6,4,1;MQ=54;FQ=87.0157;PV4=0.0719697,0.268558,0.0726568,1 GT:PL 0/1:114,0,167
Scaffold_1 289207 . C T 27.0155 PASS DP=13;VDB=0.764235;SGB=-0.511536;RPB=0.707404;MQB=0.995736;MQSB=0.935451;BQB=0.485672;MQ0F=0;AF1=0.499999;AC1=1;DP4=2,7,3,0;MQ=55;FQ=30.0194;PV4=0.0454545,0.0702542,1,0.201874 GT:PL 0/1:57,0,212
Scaffold_1 289229 . C T 225.009 PASS DP=17;VDB=0.852963;SGB=-0.676189;RPB=0.985665;MQB=0.427987;MQSB=0.915545;BQB=0.943882;MQ0F=0;AF1=0.5;AC1=1;DP4=3,2,5,6;MQ=56;FQ=101.016;PV4=1,1,1,1 GT:PL 0/1:255,0,128
Scaffold_1 289254 . G A 225.009 PASS DP=18;VDB=0.451699;SGB=-0.676189;RPB=0.274466;MQB=0.425907;MQSB=0.928603;BQB=0.922371;MQ0F=0;AF1=0.5;AC1=1;DP4=3,3,5,6;MQ=57;FQ=131.016;PV4=1,0.235402,1,1 GT:PL 0/1:255,0,158
Scaffold_1 289264 . C T 68.0074 PASS DP=18;VDB=0.479284;SGB=-0.636426;RPB=0.539212;MQB=0.933674;MQSB=0.544441;BQB=0.0396807;MQ0F=0;AF1=0.5;AC1=1;DP4=6,3,2,5;MQ=57;FQ=71.0155;PV4=0.314685,0.00287651,0.419272,1 GT:PL 0/1:98,0,215
Scaffold_1 289282 . C G 142.008 PASS DP=18;VDB=0.0327841;SGB=-0.636426;RPB=0.178438;MQB=0.137386;MQSB=0.28276;BQB=0.995907;MQ0F=0;AF1=0.5;AC1=1;DP4=6,5,3,4;MQ=59;FQ=145.016;PV4=1,0.394146,0.00191911,1 GT:PL 0/1:172,0,255
Scaffold_1 289295 . T G 155.008 PASS DP=17;VDB=0.0384294;SGB=-0.636426;RPB=0.621145;MQB=0.148858;MQSB=0.22313;BQB=0.817757;MQ0F=0;AF1=0.5;AC1=1;DP4=6,4,3,4;MQ=58;FQ=158.016;PV4=0.637186,1,0.00293081,1 GT:PL 0/1:185,0,229
Scaffold_1 289323 . G T 101.008 PASS DP=18;VDB=0.0211291;SGB=-0.616816;RPB=0.982609;MQB=0.20529;MQSB=0.0848301;BQB=0.995624;MQ0F=0;AF1=0.5;AC1=1;DP4=8,4,2,4;MQ=58;FQ=104.016;PV4=0.321267,0.4437,0.0895103,1 GT:PL 0/1:131,0,243
Scaffold_1 289554 . C G 105.008 PASS DP=17;VDB=0.788273;SGB=-0.590765;RPB=0.628992;MQB=1;MQSB=1;BQB=1;MQ0F=0;AF1=0.5;AC1=1;DP4=6,5,2,3;MQ=60;FQ=108.016;PV4=1,1,1,1 GT:PL 0/1:135,0,255
Scaffold_1 289558 . C T 108.008 PASS DP=16;VDB=0.791535;SGB=-0.590765;RPB=0.76338;MQB=1;MQSB=1;BQB=0.472367;MQ0F=0;AF1=0.5;AC1=1;DP4=5,5,2,3;MQ=60;FQ=111.016;PV4=1,1,1,1 GT:PL 0/1:138,0,238
Scaffold_1 289657 . C T 167.009 PASS DP=14;VDB=0.674881;SGB=-0.651104;RPB=0.878264;MQB=1;MQSB=0.95494;BQB=0.697274;MQ0F=0;AF1=0.5;AC1=1;DP4=3,1,4,4;MQ=60;FQ=81.0157;PV4=0.575758,0.150245,1,0.158531 GT:PL 0/1:197,0,108
Scaffold_1 289954 . A G 225.009 PASS DP=22;VDB=0.892084;SGB=-0.686358;RPB=0.674601;MQB=0.393893;MQSB=0.991121;BQB=0.450604;MQ0F=0;AF1=0.5;AC1=1;DP4=3,5,10,4;MQ=58;FQ=139.016;PV4=0.186997,1,0.0438046,0.0534491 GT:PL 0/1:255,0,166
Scaffold_1 290031 . T C 187.009 PASS DP=23;VDB=0.298589;SGB=-0.662043;RPB=0.545102;MQB=0.00374512;MQSB=0.97436;BQB=0.930391;MQ0F=0;AF1=0.5;AC1=1;DP4=4,7,5,4;MQ=55;FQ=190.016;PV4=0.653417,0.429378,9.39968e-06,1 GT:PL 0/1:217,0,255
Scaffold_1 290273 . A G 42.0073 PASS DP=13;VDB=0.100421;SGB=-0.556411;RPB=0.0812164;MQB=0.0812164;MQSB=0.809011;BQB=0.89338;MQ0F=0.0769231;AF1=0.5;AC1=1;DP4=3,2,3,1;MQ=50;FQ=45.0154;PV4=1,0.244658,0.00560072,1 GT:PL 0/1:72,0,147
Scaffold_1 290650 . G T 17.0924 PASS DP=12;VDB=0.42;SGB=-0.453602;RPB=0.571429;MQB=0;MQSB=0.89338;BQB=1;MQ0F=0;AF1=0.499995;AC1=1;DP4=5,2,0,2;MQ=51;FQ=20.058;PV4=0.166667,0.333111,0.0140416,1 GT:PL 0/1:47,0,199
Scaffold_1 308800 . G A 27.7716 PASS DP=5;VDB=0.86;SGB=-0.453602;MQ0F=0;AF1=1;AC1=2;DP4=0,0,2,0;MQ=60;FQ=-32.988 GT:PL 1/1:59,6,0
Scaffold_1 332128 . G A 31.0104 PASS DP=7;VDB=0.02;SGB=-0.453602;RPB=0;MQB=0.5;MQSB=0.810265;BQB=1;MQ0F=0;AF1=0.5;AC1=1;DP4=3,2,1,1;MQ=58;FQ=34.0168;PV4=1,1,0.0586934,1 GT:PL 0/1:61,0,158
Scaffold_1 332159 . C T 222.003 PASS DP=11;VDB=0.304945;SGB=-0.676189;MQSB=0.950952;MQ0F=0;AF1=1;AC1=2;DP4=0,0,5,6;MQ=60;FQ=-59.9861 GT:PL 1/1:255,33,0
Scaffold_1 348842 . C A 16.1143 PASS DP=6;VDB=0.02;SGB=-0.453602;RPB=0.25;MQB=0.25;MQSB=0;BQB=0.75;MQ0F=0;AF1=0.499994;AC1=1;DP4=2,2,0,2;MQ=46;FQ=19.0673;PV4=0.466667,0.344161,1,1 GT:PL 0/1:46,0,80
Scaffold_1 350414 . G A 12.272 PASS DP=15;VDB=0.02;SGB=-0.453602;RPB=0;MQB=1;MQSB=0.920044;BQB=0.888889;MQ0F=0.0666667;AF1=0.499984;AC1=1;DP4=6,3,2,0;MQ=42;FQ=15.1496;PV4=1,1,1,0.0112558 GT:PL 0/1:42,0,143
Scaffold_1 350428 . C T 66.0074 PASS DP=15;VDB=0.0218651;SGB=-0.590765;RPB=0.0452104;MQB=1;MQSB=0.795669;BQB=0.342519;MQ0F=0.0666667;AF1=0.5;AC1=1;DP4=5,3,5,0;MQ=45;FQ=69.0133;PV4=0.230769,1,1,0.0186706 GT:PL 0/1:96,0,129
Scaffold_1 350438 . C A 83.0076 PASS DP=17;VDB=0.0196075;SGB=-0.590765;RPB=0.0209031;MQB=0.342519;MQSB=0.272727;BQB=0.547344;MQ0F=0.0588235;AF1=0.5;AC1=1;DP4=6,2,5,0;MQ=45;FQ=69.9078;PV4=0.487179,1,1,0.13207 GT:PL 0/1:113,0,97
Scaffold_1 350451 . C T 124.008 PASS DP=16;VDB=0.01488;SGB=-0.636426;RPB=0.114321;MQB=0.30295;MQSB=0.89683;BQB=0.885987;MQ0F=0.0625;AF1=0.5;AC1=1;DP4=4,3,5,2;MQ=45;FQ=47.0153;PV4=1,1,1,1 GT:PL 0/1:154,0,74
Scaffold_1 350566 . G A 24.0241 PASS DP=18;VDB=0.0221621;SGB=-0.511536;RPB=0.0301974;MQB=0.0301974;MQSB=0.8;BQB=0.931063;MQ0F=0;AF1=0.499999;AC1=1;DP4=12,2,3,0;MQ=57;FQ=27.0236;PV4=1,1,0,0.0229383 GT:PL 0/1:54,0,255
Scaffold_1 350574 . C T 24.0241 PASS DP=18;VDB=0.0221621;SGB=-0.511536;RPB=0.167677;MQB=0.0489059;MQSB=0.733333;BQB=0.525788;MQ0F=0;AF1=0.499999;AC1=1;DP4=12,2,3,0;MQ=56;FQ=27.0236;PV4=1,1,1.5509e-05,0.415492 GT:PL 0/1:54,0,242
Scaffold_1 350577 . C G 40.0075 PASS DP=19;VDB=0.0205346;SGB=-0.556411;RPB=0.0831722;MQB=0.0120216;MQSB=0.75;BQB=1;MQ0F=0;AF1=0.5;AC1=1;DP4=12,2,4,0;MQ=56;FQ=43.0154;PV4=1,0.337875,0,0.365603 GT:PL 0/1:70,0,254
Scaffold_1 350578 . A G 37.0079 PASS DP=20;VDB=0.0205346;SGB=-0.556411;RPB=0.18064;MQB=0.011109;MQSB=0.798516;BQB=0.998751;MQ0F=0;AF1=0.5;AC1=1;DP4=12,3,4,0;MQ=56;FQ=40.0156;PV4=1,0.420573,0,1 GT:PL 0/1:67,0,255
Scaffold_1 350609 . G A 24.0241 PASS DP=20;VDB=0.0221621;SGB=-0.511536;RPB=0.931063;MQB=0.0489059;MQSB=0.733333;BQB=0.751477;MQ0F=0;AF1=0.499999;AC1=1;DP4=12,2,3,0;MQ=56;FQ=27.0236;PV4=1,1,1.5509e-05,1 GT:PL 0/1:54,0,247
Scaffold_1 350634 . G A 53.0072 PASS DP=19;VDB=0.0127498;SGB=-0.556411;RPB=0.236847;MQB=0.0161635;MQSB=0.692308;BQB=0.808101;MQ0F=0;AF1=0.5;AC1=1;DP4=9,2,4,0;MQ=55;FQ=56.0154;PV4=1,1,0,1 GT:PL 0/1:83,0,216
Scaffold_1 350684 . G A 48.0072 PASS DP=20;VDB=0.00872848;SGB=-0.556411;RPB=0.0449338;MQB=0.0131237;MQSB=0.751477;BQB=0.793923;MQ0F=0;AF1=0.5;AC1=1;DP4=10,3,4,0;MQ=56;FQ=51.0153;PV4=0.541176,1,0,1 GT:PL 0/1:78,0,253
Scaffold_1 350736 . G A 16.1143 PASS DP=21;VDB=0.0221621;SGB=-0.511536;RPB=0.984335;MQB=0.0693617;MQSB=0.364027;BQB=0.602289;MQ0F=0.047619;AF1=0.499994;AC1=1;DP4=8,7,0,3;MQ=55;FQ=19.069;PV4=0.215686,0.259641,0.0500125,1 GT:PL 0/1:46,0,255
Scaffold_1 350757 . T C 12.272 PASS DP=24;VDB=0.0221621;SGB=-0.511536;RPB=0.833753;MQB=0.0545253;MQSB=0.441233;BQB=0.902783;MQ0F=0.0416667;AF1=0.499984;AC1=1;DP4=9,9,0,3;MQ=56;FQ=15.1496;PV4=0.228571,1,0.0301237,1 GT:PL 0/1:42,0,255
Scaffold_1 350761 . T C 16.1143 PASS DP=23;VDB=0.00992398;SGB=-0.556411;RPB=0.721089;MQB=0.0134;MQSB=0.393893;BQB=0.69606;MQ0F=0.0434783;AF1=0.499994;AC1=1;DP4=8,10,0,4;MQ=55;FQ=19.069;PV4=0.253589,1,4.67503e-06,1 GT:PL 0/1:46,0,255
Scaffold_1 367601 . C A 63.0073 PASS DP=8;VDB=0.06;SGB=-0.453602;RPB=1;MQB=1;BQB=0;MQ0F=0;AF1=0.5;AC1=1;DP4=4,0,2,0;MQ=60;FQ=65.5005;PV4=1,1,1,1 GT:PL 0/1:93,0,102
Scaffold_1 370422 . C T 183.129 PASS DP=10;VDB=0.14143;SGB=-0.651104;RPB=0.125;MQB=0;MQSB=0.761877;BQB=0.8125;MQ0F=0.1;AF1=1;AC1=2;DP4=2,0,3,5;MQ=52;FQ=-27.9926;PV4=0.444444,0.474206,1,0.322688 GT:PL 1/1:212,1,0
Scaffold_1 371830 . T G 131.008 PASS DP=13;VDB=0.735946;SGB=-0.616816;RPB=0.564628;MQB=0.0297172;MQSB=0.924449;BQB=0.891517;MQ0F=0;AF1=0.500003;AC1=1;DP4=2,3,2,4;MQ=42;FQ=23.0366;PV4=1,0.212932,1,0.0396335 GT:PL 0/1:161,0,50
Scaffold_1 371847 . G A 19.061 PASS DP=11;VDB=0.497461;SGB=-0.556411;RPB=0.559863;MQB=0.559863;MQSB=0.904729;BQB=0.503877;MQ0F=0;AF1=0.499997;AC1=1;DP4=2,4,3,1;MQ=36;FQ=22.0421;PV4=0.52381,1,0.097307,0.345762 GT:PL 0/1:49,0,117
Scaffold_1 371849 . C A 19.061 PASS DP=11;VDB=0.497461;SGB=-0.556411;RPB=0.727822;MQB=0.559863;MQSB=0.895781;BQB=0.503877;MQ0F=0;AF1=0.499997;AC1=1;DP4=1,5,3,1;MQ=37;FQ=22.0421;PV4=0.190476,1,0.0831063,0.10973 GT:PL 0/1:49,0,99
Scaffold_1 371881 . T G 89.0077 PASS DP=11;VDB=0.913383;SGB=-0.556411;RPB=1.00775;MQB=0.335918;MQSB=0.895781;BQB=0.279932;MQ0F=0;AF1=0.5;AC1=1;DP4=2,4,2,2;MQ=35;FQ=56.0143;PV4=1,1,1,0.184375 GT:PL 0/1:119,0,83
Scaffold_1 371896 . T C 38.0077 PASS DP=11;VDB=0.497461;SGB=-0.556411;RPB=0.895781;MQB=0.727822;MQSB=0.503877;BQB=0.783809;MQ0F=0;AF1=0.5;AC1=1;DP4=2,4,2,2;MQ=37;FQ=41.0155;PV4=1,1,0.111705,1 GT:PL 0/1:68,0,140
Scaffold_1 371905 . T G 32.0097 PASS DP=12;VDB=0.484771;SGB=-0.556411;RPB=0.697274;MQB=0.397295;MQSB=0.310905;BQB=0.397295;MQ0F=0;AF1=0.5;AC1=1;DP4=2,6,2,2;MQ=38;FQ=35.0165;PV4=0.547475,1,0.072639,1 GT:PL 0/1:62,0,144
Scaffold_1 371933 . C G 13.2188 PASS DP=13;VDB=0.703527;SGB=-0.556411;RPB=0.594978;MQB=0.310905;MQSB=0.194886;BQB=0.543691;MQ0F=0;AF1=0.499987;AC1=1;DP4=3,5,2,2;MQ=34;FQ=16.1222;PV4=1,0.0614056,0.10192,0.278146 GT:PL 0/1:43,0,171
Scaffold_1 372002 . A T 145.051 PASS DP=15;VDB=0.386322;SGB=-0.662043;RPB=0.898397;MQB=0.133734;MQSB=0.997325;BQB=0.898397;MQ0F=0.0666667;AF1=0.505038;AC1=1;DP4=1,3,4,5;MQ=34;FQ=-10.4007;PV4=1,0.194604,1,1 GT:PL 0/1:175,0,17
Scaffold_1 372034 . G A 185.766 PASS DP=14;VDB=0.65376;SGB=-0.662043;RPB=0.995736;MQB=0.151887;MQSB=0.838008;BQB=0.707404;MQ0F=0.0714286;AF1=1;AC1=2;DP4=1,2,4,5;MQ=33;FQ=-32.988;PV4=1,0.219597,1,0.149434 GT:PL 1/1:217,6,0
Scaffold_1 372071 . C T 106.126 PASS DP=9;VDB=0.269736;SGB=-0.616816;RPB=0.333333;MQB=0.333333;MQSB=0.600535;BQB=0.5;MQ0F=0.111111;AF1=1;AC1=2;DP4=1,1,4,2;MQ=32;FQ=-31.9885;PV4=1,0.165885,1,1 GT:PL 1/1:137,5,0
Scaffold_1 372081 . G A 77.1256 PASS DP=10;VDB=0.625428;SGB=-0.616816;RPB=0.666667;MQB=0.333333;MQSB=0.300267;BQB=0.333333;MQ0F=0.1;AF1=1;AC1=2;DP4=0,2,3,3;MQ=29;FQ=-31.9885;PV4=0.464286,0.143834,1,1 GT:PL 1/1:108,5,0
Scaffold_1 373438 . C T 222.332 PASS DP=14;VDB=0.10712;SGB=-0.670168;RPB=0.699673;MQB=0.040184;MQSB=0.988166;BQB=0.879351;MQ0F=0.214286;AF1=1;AC1=2;DP4=0,3,4,6;MQ=37;FQ=-40.9862;PV4=0.496504,0.221261,1,1 GT:PL 1/1:255,14,0
Scaffold_1 373440 . G T 222.332 PASS DP=15;VDB=0.0391189;SGB=-0.676189;RPB=1;MQB=0.0161635;MQSB=0.966484;BQB=0.579578;MQ0F=0.266667;AF1=1;AC1=2;DP4=0,4,4,7;MQ=36;FQ=-40.9862;PV4=0.516484,0.14982,1,1 GT:PL 1/1:255,14,0
Scaffold_1 373464 . G A 222.265 PASS DP=16;VDB=0.0711401;SGB=-0.680642;RPB=0.971017;MQB=0.0144756;MQSB=0.935966;BQB=0.861658;MQ0F=0.25;AF1=1;AC1=2;DP4=0,4,4,8;MQ=37;FQ=-41.9862;PV4=0.516484,0.252132,1,1 GT:PL 1/1:255,15,0
Scaffold_1 373494 . G A 197.212 PASS DP=14;VDB=0.0308846;SGB=-0.662043;RPB=0.222222;MQB=0;MQSB=0.944444;BQB=0.666667;MQ0F=0.142857;AF1=1;AC1=2;DP4=0,2,2,7;MQ=39;FQ=-42.9861;PV4=1,0.194642,1,0.33089 GT:PL 1/1:230,16,0
Scaffold_1 373538 . G A 218.042 PASS DP=14;VDB=0.963006;SGB=-0.680642;RPB=0.833333;MQB=0;MQSB=0.485537;BQB=0.583333;MQ0F=0.142857;AF1=1;AC1=2;DP4=0,2,4,8;MQ=38;FQ=-49.986;PV4=1,0.222558,1,0.130947 GT:PL 1/1:251,23,0
Scaffold_1 373767 . C T 40.9724 PASS DP=3;VDB=0.779245;SGB=-0.511536;MQSB=1;MQ0F=0;AF1=1;AC1=2;DP4=0,0,2,1;MQ=31;FQ=-35.9869 GT:PL 1/1:73,9,0
Scaffold_1 373952 . G A 71.0656 PASS DP=7;VDB=0.528186;SGB=-0.636426;MQSB=0.405132;MQ0F=0.142857;AF1=1;AC1=2;DP4=0,0,4,3;MQ=21;FQ=-47.986 GT:PL 1/1:104,21,0
Scaffold_1 379782 . G T 26.0177 PASS DP=16;VDB=0.0221621;SGB=-0.511536;RPB=0.032027;MQB=0.682254;MQSB=0.960687;BQB=0.945009;MQ0F=0;AF1=0.499999;AC1=1;DP4=8,5,3,0;MQ=60;FQ=29.0205;PV4=0.508929,1,0.0158886,1 GT:PL 0/1:56,0,255
Scaffold_1 386544 . T G 10.2001 PASS DP=2;VDB=0.02;SGB=-0.453602;MQ0F=0;AF1=1;AC1=2;DP4=0,0,0,2;MQ=25;FQ=-32.9883 GT:PL 1/1:41,6,0
Scaffold_1 391609 . G A 81.0075 PASS DP=9;VDB=0.348933;SGB=-0.556411;RPB=0.868321;MQB=0.62023;MQSB=0.900802;BQB=0.992367;MQ0F=0;AF1=0.5;AC1=1;DP4=2,2,1,3;MQ=39;FQ=64.9611;PV4=1,0.295323,1,1 GT:PL 0/1:111,0,92
Scaffold_1 391854 . T C 17.0924 PASS DP=10;VDB=0.152777;SGB=-0.556411;RPB=0.62023;MQB=0.124046;MQSB=0.750668;BQB=0.868321;MQ0F=0;AF1=0.499995;AC1=1;DP4=1,3,2,2;MQ=45;FQ=20.058;PV4=1,0.406641,0.000835312,1 GT:PL 0/1:47,0,120
Scaffold_1 391858 . T A 59.0073 PASS DP=10;VDB=0.281015;SGB=-0.590765;RPB=0.2;MQB=0;MQSB=0.9;BQB=0.3;MQ0F=0;AF1=0.5;AC1=1;DP4=1,1,1,4;MQ=44;FQ=52.5004;PV4=1,0.0442784,0.057418,0.288066 GT:PL 0/1:89,0,80
Scaffold_1 391887 . G T 55.0072 PASS DP=9;VDB=0.265958;SGB=-0.590765;RPB=0.750668;MQB=0.150134;MQSB=0.833333;BQB=0.900802;MQ0F=0;AF1=0.5;AC1=1;DP4=1,2,1,4;MQ=46;FQ=57.6834;PV4=1,0.22225,0.0268958,1 GT:PL 0/1:85,0,96
Scaffold_1 391909 . G A 33.0091 PASS DP=7;VDB=0.559209;SGB=-0.511536;RPB=0.861511;MQB=0.28717;BQB=0.861511;MQ0F=0;AF1=0.5;AC1=1;DP4=0,3,0,3;MQ=51;FQ=35.9818;PV4=1,1,0.0628275,1 GT:PL 0/1:63,0,84
Scaffold_1 393054 . C T 22.0681 PASS DP=12;VDB=0.0665622;SGB=-0.556411;RPB=0.727822;MQB=0.0559863;MQSB=0.0559863;BQB=0.895781;MQ0F=0.416667;AF1=0.503992;AC1=1;DP4=0,6,4,0;MQ=18;FQ=-9.50362;PV4=0.0047619,1,1,1 GT:PL 0/1:52,0,18
Scaffold_1 393066 . C T 39.9786 PASS DP=12;VDB=0.0489998;SGB=-0.590765;RPB=0.896474;MQB=0.0194886;MQSB=0.0249144;BQB=0.6821;MQ0F=0.416667;AF1=0.667194;AC1=1;DP4=0,7,4,1;MQ=17;FQ=-24.003;PV4=0.010101,1,1,1 GT:PL 0/1:69,0,3
Scaffold_1 393084 . C T 20.0926 PASS DP=11;VDB=0.0797974;SGB=-0.556411;RPB=0.964642;MQB=0.0401934;MQSB=0.0401934;BQB=0.964642;MQ0F=0.363636;AF1=0.505036;AC1=1;DP4=0,7,4,0;MQ=17;FQ=-10.4027;PV4=0.0030303,1,1,1 GT:PL 0/1:50,0,17
Scaffold_1 393136 . C T 20.5794 PASS DP=6;VDB=0.0785113;SGB=-0.511536;RPB=0.28717;MQB=0.28717;MQSB=0.28717;BQB=0.861511;MQ0F=0.333333;AF1=1;AC1=2;DP4=0,3,3,0;MQ=18;FQ=-28.9912;PV4=0.1,0.369218,1,0.18695 GT:PL 1/1:50,2,0
Scaffold_1 393246 . T A 32.7667 PASS DP=2;VDB=0.66;SGB=-0.453602;MQSB=1;MQ0F=0;AF1=1;AC1=2;DP4=0,0,1,1;MQ=34;FQ=-32.988 GT:PL 1/1:64,6,0
Scaffold_1 393258 . G A 65.9724 PASS DP=3;VDB=0.707536;SGB=-0.511536;MQSB=1;MQ0F=0;AF1=1;AC1=2;DP4=0,0,2,1;MQ=44;FQ=-35.9869 GT:PL 1/1:98,9,0
Scaffold_1 393263 . C T 66.9724 PASS DP=3;VDB=0.707536;SGB=-0.511536;MQSB=1;MQ0F=0;AF1=1;AC1=2;DP4=0,0,2,1;MQ=44;FQ=-35.9869 GT:PL 1/1:99,9,0
Scaffold_1 394067 . G C 222.001 PASS DP=14;VDB=0.652509;SGB=-0.680642;MQSB=0.707404;MQ0F=0;AF1=1;AC1=2;DP4=0,0,9,3;MQ=59;FQ=-62.9862 GT:PL 1/1:255,36,0
Scaffold_1 394073 . C T 222.001 PASS DP=14;VDB=0.552793;SGB=-0.680642;MQSB=1;MQ0F=0;AF1=1;AC1=2;DP4=0,0,8,4;MQ=59;FQ=-62.9862 GT:PL 1/1:255,36,0
Scaffold_1 394145 . C T 150.067 PASS DP=7;VDB=0.116635;SGB=-0.636426;MQSB=0.8;MQ0F=0;AF1=1;AC1=2;DP4=0,0,5,2;MQ=57;FQ=-47.986 GT:PL 1/1:183,21,0
Scaffold_1 394151 . T C 133.133 PASS DP=6;VDB=0.0411825;SGB=-0.616816;MQSB=1;MQ0F=0;AF1=1;AC1=2;DP4=0,0,4,2;MQ=57;FQ=-44.9861 GT:PL 1/1:166,18,0
Scaffold_1 394176 . T A 161.134 PASS DP=7;VDB=0.932561;SGB=-0.616816;MQSB=0.75;MQ0F=0;AF1=1;AC1=2;DP4=0,0,2,4;MQ=51;FQ=-44.9861 GT:PL 1/1:194,18,0
Scaffold_1 394179 . G T 167.067 PASS DP=7;VDB=0.877023;SGB=-0.636426;MQSB=0.810265;MQ0F=0;AF1=1;AC1=2;DP4=0,0,3,4;MQ=52;FQ=-47.986 GT:PL 1/1:200,21,0
Scaffold_1 394191 . A C 146.134 PASS DP=7;VDB=0.927933;SGB=-0.616816;MQSB=0.75;MQ0F=0;AF1=1;AC1=2;DP4=0,0,2,4;MQ=51;FQ=-44.9861 GT:PL 1/1:179,18,0
Scaffold_1 394222 . T C 49.9722 PASS DP=4;VDB=0.206307;SGB=-0.511536;MQ0F=0;AF1=1;AC1=2;DP4=0,0,0,3;MQ=40;FQ=-35.9869 GT:PL 1/1:82,9,0
Scaffold_1 394240 . T C 58.9723 PASS DP=4;VDB=0.206307;SGB=-0.511536;MQ0F=0;AF1=1;AC1=2;DP4=0,0,0,3;MQ=40;FQ=-35.9869 GT:PL 1/1:91,9,0
Scaffold_1 394250 . C T 122.133 PASS DP=6;VDB=0.329692;SGB=-0.616816;MQ0F=0;AF1=1;AC1=2;DP4=0,0,0,6;MQ=49;FQ=-44.9861 GT:PL 1/1:155,18,0
Scaffold_1 394252 . A C 124.133 PASS DP=6;VDB=0.348672;SGB=-0.616816;MQ0F=0;AF1=1;AC1=2;DP4=0,0,0,6;MQ=49;FQ=-44.9861 GT:PL 1/1:157,18,0
Scaffold_1 394348 . C T 125.133 PASS DP=7;VDB=0.275478;SGB=-0.616816;MQ0F=0;AF1=1;AC1=2;DP4=0,0,0,6;MQ=52;FQ=-44.9861 GT:PL 1/1:158,18,0
Scaffold_1 394353 . C T 136.015 PASS DP=10;VDB=0.993395;SGB=-0.662043;MQ0F=0;AF1=1;AC1=2;DP4=0,0,0,9;MQ=48;FQ=-53.9861 GT:PL 1/1:169,27,0
Scaffold_1 394381 . G A 116.032 PASS DP=8;VDB=0.83311;SGB=-0.651104;MQ0F=0;AF1=1;AC1=2;DP4=0,0,0,8;MQ=49;FQ=-50.986 GT:PL 1/1:149,24,0
Scaffold_1 394403 . C G 140.066 PASS DP=7;VDB=0.405339;SGB=-0.636426;MQSB=1;MQ0F=0;AF1=1;AC1=2;DP4=0,0,1,6;MQ=43;FQ=-47.986 GT:PL 1/1:173,21,0
Scaffold_1 394421 . C T 70.5132 PASS DP=6;VDB=0.0707707;SGB=-0.556411;MQ0F=0;AF1=1;AC1=2;DP4=0,0,0,4;MQ=42;FQ=-38.9864 GT:PL 1/1:103,12,0
Scaffold_1 394514 . G A 22.0358 PASS DP=5;VDB=0.56;SGB=-0.453602;RPB=0.666667;MQB=0.333333;BQB=0.833333;MQ0F=0.4;AF1=0.500197;AC1=1;DP4=3,0,2,0;MQ=33;FQ=5.44138;PV4=1,0.39439,1,1 GT:PL 0/1:52,0,31
Scaffold_1 394537 . G C 19.061 PASS DP=6;VDB=0.56;SGB=-0.453602;RPB=0.5;MQB=0.5;BQB=0.375;MQ0F=0.333333;AF1=0.5;AC1=1;DP4=4,0,2,0;MQ=35;FQ=19.0589;PV4=1,1,1,0.395157 GT:PL 0/1:49,0,49
Scaffold_1 394551 . T C 57.0141 PASS DP=6;VDB=0.220755;SGB=-0.511536;RPB=1;MQB=1;BQB=1;MQ0F=0.333333;AF1=0.500792;AC1=1;DP4=1,0,3,0;MQ=44;FQ=-4.11551;PV4=1,1,0,0.313228 GT:PL 0/1:87,0,25
Scaffold_1 394594 . G A 45.0072 PASS DP=7;VDB=0.480199;SGB=-0.511536;RPB=0.666667;MQB=0;BQB=0.166667;MQ0F=0;AF1=0.5;AC1=1;DP4=2,0,3,0;MQ=45;FQ=45.0051;PV4=1,0.0906614,0.0108272,1 GT:PL 0/1:75,0,75
Scaffold_1 394689 . C T 12.272 PASS DP=16;VDB=0.654404;SGB=-0.511536;RPB=0.597928;MQB=0.748798;MQSB=0.604728;BQB=0.275467;MQ0F=0.3125;AF1=0.499984;AC1=1;DP4=6,4,3,0;MQ=32;FQ=15.1496;PV4=0.496504,0.0931679,1,0.117986 GT:PL 0/1:42,0,140
Scaffold_1 394714 . C T 23.0285 PASS DP=16;VDB=0.480199;SGB=-0.511536;RPB=0.513417;MQB=0.352866;MQSB=0.992528;BQB=0.997399;MQ0F=0.3125;AF1=0.499999;AC1=1;DP4=10,2,0,3;MQ=30;FQ=26.0258;PV4=0.021978,0.352061,1,0.477035 GT:PL 0/1:53,0,115
Scaffold_1 394715 . G A 41.0074 PASS DP=15;VDB=0.25494;SGB=-0.590765;RPB=1;MQB=0.965069;MQSB=0.99778;BQB=0.606531;MQ0F=0.333333;AF1=0.5;AC1=1;DP4=4,5,5,0;MQ=29;FQ=44.0154;PV4=0.0859141,0.140861,1,1 GT:PL 0/1:71,0,132
Scaffold_1 394764 . G A 51.0072 PASS DP=16;VDB=0.220638;SGB=-0.556411;RPB=0.0249144;MQB=0.793923;MQSB=0.652235;BQB=0.793923;MQ0F=0.3125;AF1=0.5;AC1=1;DP4=5,3,4,0;MQ=31;FQ=54.0136;PV4=0.490909,0.185251,1,1 GT:PL 0/1:81,0,115
Scaffold_1 394773 . G A 51.0072 PASS DP=12;VDB=0.220638;SGB=-0.556411;RPB=0.0249144;MQB=0.444281;MQSB=0.444281;BQB=0.878264;MQ0F=0.333333;AF1=0.5;AC1=1;DP4=4,4,4,0;MQ=28;FQ=50.4763;PV4=0.208081,1,1,1 GT:PL 0/1:81,0,80
Scaffold_1 394791 . G A 59.0073 PASS DP=10;VDB=0.220638;SGB=-0.556411;RPB=0.0812164;MQB=0.487298;MQSB=0.809011;BQB=0.89338;MQ0F=0.2;AF1=0.5;AC1=1;DP4=2,3,4,0;MQ=30;FQ=39.9883;PV4=0.166667,0.146176,1,1 GT:PL 0/1:89,0,67
Scaffold_1 394801 . G A 72.0075 PASS DP=10;VDB=0.324419;SGB=-0.590765;RPB=0.0812164;MQB=0.406082;MQSB=0.974597;BQB=0.89338;MQ0F=0.2;AF1=0.500005;AC1=1;DP4=1,3,4,1;MQ=34;FQ=20.058;PV4=0.206349,0.138539,1,1 GT:PL 0/1:102,0,47
Scaffold_1 394876 . A G 158.009 PASS DP=13;VDB=0.887079;SGB=-0.651104;RPB=0.98568;MQB=0.594978;MQSB=0.543691;BQB=0.996401;MQ0F=0;AF1=0.5;AC1=1;DP4=2,2,2,6;MQ=39;FQ=33.0172;PV4=0.547475,1,1,0.127656 GT:PL 0/1:188,0,60
Scaffold_1 394944 . G A 18.0749 PASS DP=20;VDB=0.807564;SGB=-0.511536;RPB=0.86753;MQB=0.917626;MQSB=0.728414;BQB=0.957088;MQ0F=0.15;AF1=0.499996;AC1=1;DP4=4,11,2,1;MQ=34;FQ=21.0492;PV4=0.245098,0.445569,1,0.259849 GT:PL 0/1:48,0,191
Scaffold_1 394953 . C G 113.008 PASS DP=21;VDB=0.10712;SGB=-0.670168;RPB=0.50373;MQB=0.650664;MQSB=0.475187;BQB=0.50373;MQ0F=0.190476;AF1=0.5;AC1=1;DP4=4,3,3,7;MQ=34;FQ=67.0154;PV4=0.349959,0.0580339,1,1 GT:PL 0/1:143,0,94
Scaffold_1 394964 . G A 110.008 PASS DP=22;VDB=0.0698568;SGB=-0.662043;RPB=0.63703;MQB=0.315246;MQSB=0.303044;BQB=0.545102;MQ0F=0.181818;AF1=0.5;AC1=1;DP4=7,4,0,9;MQ=33;FQ=112.377;PV4=0.00472136,0.0377608,1,1 GT:PL 0/1:140,0,148
Scaffold_1 394973 . G A 81.0075 PASS DP=23;VDB=0.0154313;SGB=-0.636426;RPB=0.649117;MQB=0.222931;MQSB=0.637085;BQB=0.447727;MQ0F=0.173913;AF1=0.5;AC1=1;DP4=7,5,1,6;MQ=32;FQ=84.0156;PV4=0.147297,0.0435618,1,1 GT:PL 0/1:111,0,156
Scaffold_1 394977 . C G 140.008 PASS DP=23;VDB=0.0326276;SGB=-0.662043;RPB=0.727471;MQB=0.413194;MQSB=0.511891;BQB=0.943233;MQ0F=0.173913;AF1=0.5;AC1=1;DP4=7,4,1,8;MQ=33;FQ=130.751;PV4=0.0281019,0.259551,1,1 GT:PL 0/1:170,0,158
Scaffold_1 395040 . T C 36.0081 PASS DP=13;VDB=0.137328;SGB=-0.511536;RPB=0.115573;MQB=0.577865;MQSB=0.89338;BQB=0.924584;MQ0F=0.230769;AF1=0.5;AC1=1;DP4=3,3,1,2;MQ=29;FQ=38.908;PV4=1,1,1,0.0492737 GT:PL 0/1:66,0,82
Scaffold_1 395099 . C T 15.1417 PASS DP=10;VDB=0.71601;SGB=-0.511536;RPB=0.405132;MQB=0.607698;MQSB=0.810265;BQB=0.810265;MQ0F=0.2;AF1=0.499992;AC1=1;DP4=2,2,1,2;MQ=33;FQ=18.0829;PV4=1,1,0.10194,1 GT:PL 0/1:45,0,114
Scaffold_1 395125 . C G 17.0924 PASS DP=10;VDB=0.32;SGB=-0.453602;RPB=0.8125;MQB=0.25;MQSB=0.783809;BQB=0.8125;MQ0F=0.3;AF1=0.499995;AC1=1;DP4=3,5,1,1;MQ=32;FQ=20.058;PV4=1,0.443578,1,1 GT:PL 0/1:47,0,132
Scaffold_1 395140 . A C 65.0073 PASS DP=10;VDB=0.0794599;SGB=-0.616816;RPB=0.167959;MQB=0.559863;MQSB=0.783809;BQB=0.559863;MQ0F=0.3;AF1=0.5;AC1=1;DP4=1,3,3,3;MQ=32;FQ=38.0115;PV4=0.571429,1,0.316305,1 GT:PL 0/1:95,0,65
Scaffold_1 395147 . G A 12.272 PASS DP=10;VDB=0.0481133;SGB=-0.511536;RPB=0.274945;MQB=0.641538;MQSB=0.783809;BQB=0.733186;MQ0F=0.3;AF1=0.499984;AC1=1;DP4=2,5,2,1;MQ=32;FQ=15.1496;PV4=0.5,1,0.340869,1 GT:PL 0/1:42,0,136
Scaffold_1 395169 . G A 10.42 PASS DP=10;VDB=0.06;SGB=-0.453602;RPB=0.571429;MQB=0.714286;MQSB=0.924584;BQB=0.714286;MQ0F=0.3;AF1=0.499975;AC1=1;DP4=2,5,1,1;MQ=33;FQ=13.2265;PV4=1,1,1,1 GT:PL 0/1:40,0,137
Scaffold_1 395180 . C T 82.0076 PASS DP=11;VDB=0.155866;SGB=-0.636426;RPB=0.183296;MQB=0.183296;MQSB=0.523791;BQB=0.824834;MQ0F=0.272727;AF1=0.5;AC1=1;DP4=1,2,4,3;MQ=32;FQ=57.0085;PV4=1,0.230121,0.0638482,1 GT:PL 0/1:112,0,84
Scaffold_1 395215 . C T 26.0177 PASS DP=9;VDB=0.949352;SGB=-0.511536;RPB=0.924584;MQB=0.809011;MQSB=0.89338;BQB=0.809011;MQ0F=0.333333;AF1=0.499999;AC1=1;DP4=4,2,1,2;MQ=28;FQ=29.0096;PV4=0.52381,1,1,0.0916341 GT:PL 0/1:56,0,82
Scaffold_1 395220 . G A 14.176 PASS DP=9;VDB=0.0506481;SGB=-0.511536;RPB=0.809011;MQB=0.809011;MQSB=0.89338;BQB=0.924584;MQ0F=0.333333;AF1=0.49999;AC1=1;DP4=3,3,2,1;MQ=28;FQ=17.1;PV4=1,0.3944,1,1 GT:PL 0/1:44,0,85
Scaffold_1 395240 . G A 20.051 PASS DP=7;VDB=0.0506481;SGB=-0.511536;RPB=0.202566;MQB=0.810265;MQSB=0.810265;BQB=0.405132;MQ0F=0.428571;AF1=0.500123;AC1=1;DP4=2,2,2,1;MQ=24;FQ=6.91654;PV4=1,0.0727953,1,0.0135217 GT:PL 0/1:50,0,33
Scaffold_1 395472 . T G 57.6373 PASS DP=14;VDB=0.855249;SGB=-0.636426;RPB=0.785714;MQB=0.285714;MQSB=0.809011;BQB=0.714286;MQ0F=0.0714286;AF1=1;AC1=2;DP4=2,0,4,3;MQ=18;FQ=-37.9865;PV4=0.5,1,1,0.493829 GT:PL 1/1:90,11,0
Scaffold_1 395549 . C T 47.0072 PASS DP=16;VDB=0.0343724;SGB=-0.556411;RPB=0.0144756;MQB=0.0703402;MQSB=0.0357143;BQB=0.992674;MQ0F=0;AF1=0.5;AC1=1;DP4=0,12,2,2;MQ=32;FQ=50.0152;PV4=0.05,0.30144,1,0.00791873 GT:PL 0/1:77,0,123
Scaffold_1 395604 . C T 11.3381 PASS DP=11;VDB=0.0433485;SGB=-0.511536;RPB=0.221971;MQB=0.829029;MQSB=0.0555556;BQB=0.954207;MQ0F=0.0909091;AF1=0.49998;AC1=1;DP4=2,6,0,3;MQ=35;FQ=14.1838;PV4=1,1,0.294095,0.293665 GT:PL 0/1:41,0,162
Scaffold_1 395745 . A G 36.0081 PASS DP=10;VDB=0.878371;SGB=-0.511536;RPB=0.750668;MQB=0.300267;MQSB=0.868321;BQB=0.600535;MQ0F=0;AF1=0.5;AC1=1;DP4=3,2,1,2;MQ=33;FQ=38.9884;PV4=1,0.0830066,1,0.0884503 GT:PL 0/1:66,0,88
Scaffold_1 395758 . C G 13.2188 PASS DP=6;VDB=0.131948;SGB=-0.511536;RPB=0.861511;MQB=0.861511;MQSB=1;BQB=0.861511;MQ0F=0;AF1=0.499988;AC1=1;DP4=3,0,1,2;MQ=28;FQ=15.8632;PV4=0.4,0.181516,0.286383,1 GT:PL 0/1:43,0,55
Scaffold_1 395805 . A T 15.1417 PASS DP=8;VDB=0.14;SGB=-0.453602;RPB=0.5;MQB=0.625;MQSB=1;BQB=0.875;MQ0F=0;AF1=0.499992;AC1=1;DP4=1,3,1,1;MQ=27;FQ=17.9499;PV4=1,1,1,1 GT:PL 0/1:45,0,60
Scaffold_1 395823 . C T 15.1417 PASS DP=7;VDB=0.14;SGB=-0.453602;RPB=0;MQB=0.833333;MQSB=0.666667;BQB=0.333333;MQ0F=0;AF1=0.499992;AC1=1;DP4=1,2,1,1;MQ=30;FQ=17.9769;PV4=1,0.109551,1,0.136114 GT:PL 0/1:45,0,61
Scaffold_1 395855 . A G 42.9723 PASS DP=3;VDB=0.172729;SGB=-0.511536;MQSB=1;MQ0F=0;AF1=1;AC1=2;DP4=0,0,1,2;MQ=28;FQ=-35.9869 GT:PL 1/1:75,9,0
Scaffold_1 396156 . G A 25.155 PASS DP=6;VDB=0.0649539;SGB=-0.511536;RPB=0.28717;MQB=0.28717;MQSB=0;BQB=0.861511;MQ0F=0.333333;AF1=0.516287;AC1=1;DP4=2,1,0,3;MQ=22;FQ=-15.1214;PV4=0.4,1,1,0.0580583 GT:PL 0/1:55,0,12
Scaffold_1 396192 . C T 23.0371 PASS DP=10;VDB=0.0714862;SGB=-0.511536;RPB=0.405132;MQB=0.202566;MQSB=0.202566;BQB=0.607698;MQ0F=0.4;AF1=0.500996;AC1=1;DP4=3,1,0,3;MQ=21;FQ=-4.7583;PV4=0.142857,0.190117,1,1 GT:PL 0/1:53,0,24
Scaffold_1 396195 . A G 15.1421 PASS DP=11;VDB=0.0714862;SGB=-0.511536;RPB=0.824834;MQB=0.0916482;MQSB=0.0476173;BQB=0.733186;MQ0F=0.454545;AF1=0.500042;AC1=1;DP4=5,2,0,3;MQ=19;FQ=9.85039;PV4=0.166667,0.455401,1,1 GT:PL 0/1:45,0,37
Scaffold_1 403498 . A G 27.5204 PASS DP=4;VDB=0.118267;SGB=-0.556411;MQSB=1;MQ0F=0;AF1=1;AC1=2;DP4=0,0,1,3;MQ=20;FQ=-38.9864 GT:PL 1/1:60,12,0
Scaffold_1 403914 . G A 14.7836 PASS DP=11;VDB=0.00314254;SGB=-0.651104;RPB=0.414697;MQB=0.184981;BQB=0.472367;MQ0F=0.454545;AF1=1;AC1=2;DP4=3,0,8,0;MQ=12;FQ=-37.9866;PV4=1,0.100025,1,0.284161 GT:PL 1/1:47,11,0
Scaffold_1 406566 . A C 25.2054 PASS DP=6;VDB=0.745967;SGB=-0.556411;RPB=1;MQB=1;MQSB=1;BQB=1;MQ0F=0.333333;AF1=1;AC1=2;DP4=0,1,4,0;MQ=20;FQ=-34.9872;PV4=0.2,0.342519,1,0.250956 GT:PL 1/1:57,8,0
Scaffold_1 406778 . G A 17.1592 PASS DP=7;VDB=0.568985;SGB=-0.511536;RPB=1.01283;MQB=0.202566;MQSB=1;BQB=0.810265;MQ0F=0.142857;AF1=0.508027;AC1=1;DP4=4,0,2,1;MQ=28;FQ=-12.2547;PV4=0.428571,1,1,0.142795 GT:PL 0/1:47,0,15
Scaffold_1 406800 . T C 77.0075 PASS DP=10;VDB=0.303109;SGB=-0.556411;RPB=0.0812164;MQB=0.406082;MQSB=0.571429;BQB=0.243649;MQ0F=0.1;AF1=0.500003;AC1=1;DP4=4,1,3,1;MQ=36;FQ=23.0366;PV4=1,1,1,0.00803427 GT:PL 0/1:107,0,50
Scaffold_1 406816 . G A 67.0074 PASS DP=10;VDB=0.303109;SGB=-0.556411;RPB=0.111973;MQB=0.279932;MQSB=0.75;BQB=0.895781;MQ0F=0.1;AF1=0.500002;AC1=1;DP4=5,1,3,1;MQ=34;FQ=25.0285;PV4=1,0.397568,1,1 GT:PL 0/1:97,0,52
Scaffold_1 406831 . A G 44.0073 PASS DP=11;VDB=0.89732;SGB=-0.556411;RPB=0.895781;MQB=0.503877;MQSB=0.75;BQB=0.727822;MQ0F=0.0909091;AF1=0.5;AC1=1;DP4=5,1,3,1;MQ=37;FQ=46.0421;PV4=1,1,1,0.0344658 GT:PL 0/1:74,0,80
Scaffold_1 407121 . T A 51.0072 PASS DP=19;VDB=0.648709;SGB=-0.590765;RPB=0.934209;MQB=0.998612;MQSB=0.533333;BQB=0.731616;MQ0F=0.0526316;AF1=0.5;AC1=1;DP4=1,11,1,4;MQ=39;FQ=54.0154;PV4=0.514706,0.418893,0.41562,1 GT:PL 0/1:81,0,178
Scaffold_1 407145 . T A 84.0076 PASS DP=16;VDB=0.766069;SGB=-0.616816;RPB=0.547669;MQB=0.967216;MQSB=0.5;BQB=0.927743;MQ0F=0.0625;AF1=0.5;AC1=1;DP4=1,7,1,5;MQ=38;FQ=87.0144;PV4=1,0.289805,1,0.280688 GT:PL 0/1:114,0,149
Scaffold_1 407188 . T A 64.0073 PASS DP=12;VDB=0.610267;SGB=-0.556411;RPB=0.913799;MQB=0.236382;MQSB=0.6;BQB=0.94394;MQ0F=0.0833333;AF1=0.5;AC1=1;DP4=1,7,1,3;MQ=33;FQ=66.9612;PV4=1,1,1,1 GT:PL 0/1:94,0,113
Scaffold_1 407194 . C T 141.094 PASS DP=12;VDB=0.229708;SGB=-0.651104;RPB=0.174611;MQB=0.125315;MQSB=0.6;BQB=0.543691;MQ0F=0.0833333;AF1=0.510155;AC1=1;DP4=0,4,2,6;MQ=33;FQ=-13.1986;PV4=0.515152,1,1,1 GT:PL 0/1:171,0,14
Scaffold_1 407200 . C T 66.0074 PASS DP=10;VDB=0.610267;SGB=-0.556411;RPB=0.895781;MQB=0.279932;MQSB=0.5;BQB=0.783809;MQ0F=0.1;AF1=0.5;AC1=1;DP4=1,5,1,3;MQ=34;FQ=66.4765;PV4=1,0.120752,1,0.154226 GT:PL 0/1:96,0,97
Scaffold_1 407209 . C T 39.0076 PASS DP=9;VDB=0.5;SGB=-0.511536;RPB=0.924584;MQB=0.462292;MQSB=0.571429;BQB=0.924584;MQ0F=0.111111;AF1=0.5;AC1=1;DP4=1,5,1,2;MQ=32;FQ=42.01;PV4=1,1,1,0.432797 GT:PL 0/1:69,0,98
Scaffold_1 407628 . C T 16.1143 PASS DP=5;VDB=0.18;SGB=-0.453602;RPB=0.833333;MQB=1;BQB=0.5;MQ0F=0;AF1=0.499994;AC1=1;DP4=3,0,2,0;MQ=33;FQ=18.9843;PV4=1,0.136114,1,1 GT:PL 0/1:46,0,63
Scaffold_1 407652 . G A 16.1143 PASS DP=5;VDB=0.18;SGB=-0.453602;RPB=0.666667;MQB=1;BQB=0.5;MQ0F=0;AF1=0.499994;AC1=1;DP4=3,0,2,0;MQ=33;FQ=18.9843;PV4=1,0.136114,1,1 GT:PL 0/1:46,0,63
Scaffold_1 407653 . G A 16.1143 PASS DP=5;VDB=0.18;SGB=-0.453602;RPB=0.833333;MQB=1;BQB=0.666667;MQ0F=0;AF1=0.499994;AC1=1;DP4=3,0,2,0;MQ=33;FQ=18.9355;PV4=1,1,1,1 GT:PL 0/1:46,0,61
Scaffold_1 407662 . G A 31.0104 PASS DP=5;VDB=0.37344;SGB=-0.511536;RPB=0.833333;MQB=1;BQB=0.666667;MQ0F=0;AF1=0.500006;AC1=1;DP4=2,0,3,0;MQ=33;FQ=18.9355;PV4=1,1,0.416678,1 GT:PL 0/1:61,0,46
Scaffold_1 407849 . C T 111.008 PASS DP=9;VDB=0.421803;SGB=-0.556411;RPB=0.868321;MQB=0.248092;MQSB=0.5;BQB=0.124046;MQ0F=0;AF1=0.5;AC1=1;DP4=3,1,3,1;MQ=47;FQ=44.0154;PV4=1,1,1,1 GT:PL 0/1:141,0,71
Scaffold_1 407906 . C T 96.0077 PASS DP=10;VDB=0.560696;SGB=-0.556411;RPB=0.992367;MQB=0.868321;MQSB=0;BQB=0.868321;MQ0F=0;AF1=0.5;AC1=1;DP4=3,1,3,1;MQ=50;FQ=88.6018;PV4=1,1,1,1 GT:PL 0/1:126,0,116
Scaffold_1 407995 . C T 39.0076 PASS DP=9;VDB=0.681436;SGB=-0.511536;RPB=0.600535;MQB=0.150134;MQSB=1;BQB=0.900802;MQ0F=0;AF1=0.5;AC1=1;DP4=1,4,0,3;MQ=50;FQ=42.0155;PV4=1,0.363829,0.00874438,1 GT:PL 0/1:69,0,153
Scaffold_1 408003 . C G 36.0081 PASS DP=9;VDB=0.681436;SGB=-0.511536;RPB=0.600535;MQB=0.150134;MQSB=1;BQB=0.900802;MQ0F=0;AF1=0.5;AC1=1;DP4=1,4,0,3;MQ=50;FQ=39.0157;PV4=1,0.234278,0.00874438,1 GT:PL 0/1:66,0,162
Scaffold_1 408341 . G A 15.1419 PASS DP=8;VDB=0.0681597;SGB=-0.511536;RPB=1.01283;MQB=0.607698;BQB=0.607698;MQ0F=0;AF1=0.500012;AC1=1;DP4=4,0,3,0;MQ=31;FQ=12.7939;PV4=1,0.182232,1,1 GT:PL 0/1:45,0,41
Scaffold_1 408371 . G A 15.1418 PASS DP=8;VDB=0.0681597;SGB=-0.511536;RPB=1.01283;MQB=0.607698;BQB=0.810265;MQ0F=0;AF1=0.499998;AC1=1;DP4=4,0,3,0;MQ=31;FQ=15.5972;PV4=1,0.201486,1,1 GT:PL 0/1:45,0,46
Scaffold_1 408550 . G A 50.0072 PASS DP=8;VDB=0.919254;SGB=-0.590765;RPB=0.6;MQB=0.8;BQB=0.8;MQ0F=0;AF1=0.500001;AC1=1;DP4=0,2,0,5;MQ=42;FQ=28.0082;PV4=1,0.288066,0.187548,1 GT:PL 0/1:80,0,55
Scaffold_1 408568 . G A 71.0074 PASS DP=9;VDB=0.703527;SGB=-0.556411;RPB=0.89338;MQB=0.89338;MQSB=0.571429;BQB=0.89338;MQ0F=0;AF1=0.5;AC1=1;DP4=1,4,1,3;MQ=44;FQ=69.8911;PV4=1,0.308544,1,1 GT:PL 0/1:101,0,99
Scaffold_1 408578 . G A 44.0073 PASS DP=7;VDB=0.275636;SGB=-0.511536;RPB=0.861511;MQB=0.861511;MQSB=1;BQB=0.861511;MQ0F=0;AF1=0.5;AC1=1;DP4=1,2,0,3;MQ=51;FQ=47.0016;PV4=1,0.18695,0.308151,1 GT:PL 0/1:74,0,99
Scaffold_1 408621 . C G 37.0079 PASS DP=5;VDB=0.22;SGB=-0.453602;RPB=0;MQB=0.666667;MQSB=1;BQB=1;MQ0F=0;AF1=0.5;AC1=1;DP4=0,3,1,1;MQ=53;FQ=39.8032;PV4=0.4,1,1,1 GT:PL 0/1:67,0,80
Scaffold_1 409121 . T C 56.9722 PASS DP=4;VDB=0.78654;SGB=-0.511536;MQ0F=0;AF1=1;AC1=2;DP4=0,0,3,0;MQ=55;FQ=-35.9869 GT:PL 1/1:89,9,0
Scaffold_1 416508 . C T 28.0137 PASS DP=6;VDB=0.02;SGB=-0.453602;RPB=1;MQB=1;BQB=0.25;MQ0F=0;AF1=0.5;AC1=1;DP4=4,0,2,0;MQ=60;FQ=31.0183;PV4=1,1,1,1 GT:PL 0/1:58,0,102
Scaffold_1 425461 . A C 11.3482 PASS DP=11;VDB=0.5;SGB=-0.453602;RPB=1;MQB=1;MQSB=1;BQB=1;MQ0F=0;AF1=0.501236;AC1=1;DP4=1,0,0,2;MQ=60;FQ=-5.49391;PV4=0.333333,0,1,1 GT:PL 0/1:41,0,23
Scaffold_1 441746 . G C 222 PASS DP=14;VDB=0.0452691;SGB=-0.686358;MQSB=0.965069;MQ0F=0;AF1=1;AC1=2;DP4=0,0,9,5;MQ=53;FQ=-68.9862 GT:PL 1/1:255,42,0
Scaffold_1 441761 . A C 222 PASS DP=14;VDB=0.0434444;SGB=-0.683931;MQSB=0.997325;MQ0F=0;AF1=1;AC1=2;DP4=0,0,8,5;MQ=52;FQ=-65.9862 GT:PL 1/1:255,39,0
Scaffold_1 441803 . A G 222.003 PASS DP=15;VDB=0.875639;SGB=-0.676189;MQSB=0.297172;MQ0F=0;AF1=1;AC1=2;DP4=0,0,6,5;MQ=43;FQ=-59.9861 GT:PL 1/1:255,33,0
Scaffold_1 441807 . T A 222.332 PASS DP=16;VDB=0.903477;SGB=-0.680642;RPB=1;MQB=1;MQSB=0.695312;BQB=1;MQ0F=0;AF1=1;AC1=2;DP4=1,0,6,6;MQ=44;FQ=-40.9862;PV4=1,1,0.00789028,1 GT:PL 1/1:255,14,0
Scaffold_1 441813 . A C 222.003 PASS DP=15;VDB=0.90953;SGB=-0.676189;MQSB=0.356607;MQ0F=0;AF1=1;AC1=2;DP4=0,0,5,6;MQ=43;FQ=-59.9861 GT:PL 1/1:255,33,0
Scaffold_1 441823 . C T 221.999 PASS DP=17;VDB=0.986624;SGB=-0.689466;MQSB=0.0747118;MQ0F=0;AF1=1;AC1=2;DP4=0,0,6,10;MQ=47;FQ=-74.9863 GT:PL 1/1:255,48,0
Scaffold_1 441841 . A T 222.003 PASS DP=15;VDB=0.059314;SGB=-0.676189;MQSB=0.200967;MQ0F=0;AF1=1;AC1=2;DP4=0,0,4,7;MQ=50;FQ=-59.9861 GT:PL 1/1:255,33,0
Scaffold_1 446950 . G T 10.42 PASS DP=5;VDB=0.02;SGB=-0.453602;RPB=0;MQB=1;BQB=0;MQ0F=0;AF1=0.499975;AC1=1;DP4=3,0,2,0;MQ=60;FQ=13.2264;PV4=1,0.0139337,1,1 GT:PL 0/1:40,0,87
Scaffold_1 460339 . G T 27.0155 PASS DP=5;VDB=0.02;SGB=-0.453602;RPB=0;MQB=1;MQSB=1;BQB=0.5;MQ0F=0;AF1=0.499999;AC1=1;DP4=1,2,2,0;MQ=60;FQ=30.0192;PV4=0.4,0.136114,1,1 GT:PL 0/1:57,0,102
Scaffold_1 463384 . T C 11.3381 PASS DP=11;VDB=0.58;SGB=-0.453602;RPB=0.777778;MQB=0.888889;MQSB=0.716531;BQB=0.555556;MQ0F=0;AF1=0.49998;AC1=1;DP4=6,3,2,0;MQ=42;FQ=14.1838;PV4=1,1,0.33089,1 GT:PL 0/1:41,0,210
Scaffold_1 463497 . T C 28.0137 PASS DP=16;VDB=0.0714862;SGB=-0.511536;RPB=0.832553;MQB=0.682254;MQSB=0.998397;BQB=0.921781;MQ0F=0;AF1=0.5;AC1=1;DP4=11,2,0,3;MQ=56;FQ=31.0185;PV4=0.0178571,1,0.252122,1 GT:PL 0/1:58,0,235
Scaffold_1 463555 . T G 37.0079 PASS DP=14;VDB=0.0714862;SGB=-0.511536;RPB=0.597928;MQB=0.239651;MQSB=0.695312;BQB=0.968368;MQ0F=0;AF1=0.5;AC1=1;DP4=6,4,0,3;MQ=58;FQ=40.0156;PV4=0.192308,1,0.013392,1 GT:PL 0/1:67,0,248
Scaffold_1 470744 . C A 36.0094 PASS DP=3;VDB=0.02;SGB=-0.453602;RPB=1;MQB=1;BQB=1;MQ0F=0;AF1=0.500158;AC1=1;DP4=0,1,0,2;MQ=60;FQ=6.20321;PV4=1,1,1,1 GT:PL 0/1:66,0,32
Scaffold_1 471462 . C G 54.9722 PASS DP=8;VDB=0.345596;SGB=-0.511536;MQ0F=0;AF1=1;AC1=2;DP4=0,0,3,0;MQ=57;FQ=-35.9869 GT:PL 1/1:87,9,0
Scaffold_1 482882 . C A 19.061 PASS DP=16;VDB=0.0221621;SGB=-0.511536;RPB=0.0851108;MQB=1;MQSB=1;BQB=0.0851108;MQ0F=0;AF1=0.499997;AC1=1;DP4=2,11,0,3;MQ=60;FQ=22.0421;PV4=1,0.0211312,1,0.00310199 GT:PL 0/1:49,0,247
Scaffold_1 483681 . G A 19.061 PASS DP=8;VDB=0.96;SGB=-0.453602;RPB=0.833333;MQB=1;MQSB=1;BQB=0.75;MQ0F=0;AF1=0.499997;AC1=1;DP4=2,4,0,2;MQ=60;FQ=22.0421;PV4=1,0.434309,1,0.312688 GT:PL 0/1:49,0,173
Scaffold_1 485740 . C A 10.42 PASS DP=13;VDB=0.02;SGB=-0.453602;RPB=0.2;MQB=1;MQSB=1;BQB=0.9;MQ0F=0;AF1=0.499975;AC1=1;DP4=4,6,0,2;MQ=60;FQ=13.2265;PV4=0.515152,1,1,0.0321024 GT:PL 0/1:40,0,253
Scaffold_1 508279 . C A 10.42 PASS DP=12;VDB=0.02;SGB=-0.453602;RPB=0.2;MQB=1;MQSB=0.95494;BQB=0.6;MQ0F=0;AF1=0.499975;AC1=1;DP4=7,3,0,2;MQ=60;FQ=13.2265;PV4=0.151515,1,1,1 GT:PL 0/1:40,0,229
Scaffold_1 513046 . G T 38.0077 PASS DP=13;VDB=0.0221621;SGB=-0.511536;RPB=1;MQB=1;MQSB=1;BQB=0.968368;MQ0F=0;AF1=0.5;AC1=1;DP4=6,4,3,0;MQ=60;FQ=41.0155;PV4=0.496504,1,1,1 GT:PL 0/1:68,0,253
Scaffold_1 522537 . C A 18.0749 PASS DP=8;VDB=0.02;SGB=-0.453602;RPB=0;MQB=1;MQSB=1.01283;BQB=0.2;MQ0F=0;AF1=0.499996;AC1=1;DP4=2,3,2,0;MQ=60;FQ=21.0492;PV4=0.428571,0.0311762,1,1 GT:PL 0/1:48,0,156
Scaffold_1 531284 . A T 70.0074 PASS DP=12;VDB=0.0157002;SGB=-0.616816;RPB=0.950952;MQB=0.0297172;MQSB=0.683497;BQB=0.564628;MQ0F=0;AF1=0.5;AC1=1;DP4=1,4,4,2;MQ=45;FQ=72.9612;PV4=0.242424,1,3.06592e-05,1 GT:PL 0/1:100,0,119
Scaffold_1 531329 . G C 48.0072 PASS DP=17;VDB=0.0128822;SGB=-0.616816;RPB=0.483225;MQB=0.00408677;MQSB=0.994962;BQB=0.980001;MQ0F=0;AF1=0.5;AC1=1;DP4=7,4,4,2;MQ=51;FQ=51.0153;PV4=1,0.44837,8.71487e-09,1 GT:PL 0/1:78,0,244
Scaffold_1 531363 . C G 54.0072 PASS DP=18;VDB=0.0128822;SGB=-0.616816;RPB=0.00911137;MQB=0.00408677;MQSB=0.914947;BQB=0.85832;MQ0F=0;AF1=0.5;AC1=1;DP4=8,3,4,2;MQ=51;FQ=57.0154;PV4=1,0.0919224,8.71487e-09,1 GT:PL 0/1:84,0,248
Scaffold_1 531659 . G A 25.0205 PASS DP=11;VDB=0.397076;SGB=-0.556411;RPB=0.924449;MQB=0.643095;MQSB=0.777778;BQB=0.924449;MQ0F=0;AF1=0.499999;AC1=1;DP4=2,5,0,4;MQ=31;FQ=28.0219;PV4=0.490909,1,0.218797,1 GT:PL 0/1:55,0,142
Scaffold_1 531676 . G T 15.1417 PASS DP=12;VDB=0.372756;SGB=-0.556411;RPB=0.793923;MQB=0.444281;MQSB=0.596251;BQB=0.838046;MQ0F=0;AF1=0.499992;AC1=1;DP4=3,5,0,4;MQ=37;FQ=18.0829;PV4=0.490909,0.321638,0.121692,1 GT:PL 0/1:45,0,164
Scaffold_1 536670 . G T 16.1143 PASS DP=12;VDB=0.02;SGB=-0.453602;RPB=0.125;MQB=1;MQSB=1;BQB=0.875;MQ0F=0;AF1=0.499994;AC1=1;DP4=7,1,2,0;MQ=60;FQ=19.069;PV4=1,0.43086,1,0.468915 GT:PL 0/1:46,0,195
Scaffold_1 538808 . G T 16.1143 PASS DP=6;VDB=0.02;SGB=-0.453602;RPB=0;MQB=1;BQB=0.625;MQ0F=0;AF1=0.499994;AC1=1;DP4=0,4,0,2;MQ=60;FQ=19.069;PV4=1,0.257876,1,1 GT:PL 0/1:46,0,99
Scaffold_1 542955 . G T 20.3035 PASS DP=5;VDB=0.233642;SGB=-0.590765;MQSB=0;MQ0F=0.6;AF1=1;AC1=2;DP4=0,0,3,2;MQ=16;FQ=-41.9862 GT:PL 1/1:53,15,0
Scaffold_1 544525 . G C 78.0075 PASS DP=48;VDB=0.0449036;SGB=-0.680642;RPB=0.33008;MQB=0.031048;MQSB=0.428674;BQB=0.858022;MQ0F=0.375;AF1=0.5;AC1=1;DP4=19,13,8,4;MQ=20;FQ=78.8912;PV4=0.739452,1,1,1 GT:PL 0/1:108,0,110
Scaffold_1 544587 . G A 65.0073 PASS DP=48;VDB=0.0352033;SGB=-0.662043;RPB=0.00559383;MQB=0.0103982;MQSB=0.97297;BQB=0.815622;MQ0F=0.541667;AF1=0.5;AC1=1;DP4=13,23,4,5;MQ=20;FQ=67.2254;PV4=0.710907,1,1,1 GT:PL 0/1:95,0,102
Scaffold_1 544837 . T C 12.4716 PASS DP=20;VDB=0.357605;SGB=-0.590765;RPB=0.983003;MQB=0.039122;BQB=0.810584;MQ0F=0.5;AF1=0.5263;AC1=1;DP4=0,14,0,5;MQ=15;FQ=-17.0743;PV4=1,1,1,1 GT:PL 0/1:42,0,10
Scaffold_1 545292 . C A 27.0189 PASS DP=9;VDB=0.840365;SGB=-0.556411;RPB=0.992367;MQB=0.868321;MQSB=0.62023;BQB=0.62023;MQ0F=0.111111;AF1=0.500396;AC1=1;DP4=1,3,3,1;MQ=23;FQ=3.54418;PV4=0.485714,0.0744439,1,0.0702377 GT:PL 0/1:57,0,28
Scaffold_1 545315 . T A 26.0199 PASS DP=8;VDB=0.878371;SGB=-0.511536;RPB=0.900802;MQB=0.450401;MQSB=0.150134;BQB=0.900802;MQ0F=0.125;AF1=0.50025;AC1=1;DP4=1,4,2,1;MQ=23;FQ=4.76691;PV4=0.464286,1,1,1 GT:PL 0/1:56,0,30
Scaffold_1 545517 . A C 197.042 PASS DP=12;VDB=0.00939103;SGB=-0.670168;RPB=1;MQB=1;MQSB=0.891517;BQB=1;MQ0F=0.0833333;AF1=1;AC1=2;DP4=1,0,4,6;MQ=46;FQ=-49.986;PV4=0.454545,1,1,1 GT:PL 1/1:230,23,0
Scaffold_1 545559 . G A 163.514 PASS DP=12;VDB=0.039586;SGB=-0.662043;RPB=0.0443614;MQB=0.0443614;MQSB=0.372712;BQB=0.25042;MQ0F=0.25;AF1=1;AC1=2;DP4=3,0,3,6;MQ=41;FQ=-38.9864;PV4=0.181818,0.107468,1,1 GT:PL 1/1:196,12,0
Scaffold_1 545893 . C G 179.646 PASS DP=24;VDB=0.0313822;SGB=-0.686358;RPB=0.00263197;MQB=0.00183973;MQSB=0.536296;BQB=0.792218;MQ0F=0.0833333;AF1=0.593902;AC1=1;DP4=6,2,5,9;MQ=27;FQ=-22.013;PV4=0.182663,0.0647262,1,1 GT:PL 0/1:209,0,5
Scaffold_1 545894 . T A 173.34 PASS DP=24;VDB=0.0475598;SGB=-0.683931;RPB=0.00302958;MQB=0.00132993;MQSB=0.733112;BQB=1;MQ0F=0.0833333;AF1=0.543032;AC1=1;DP4=6,3,5,8;MQ=25;FQ=-19.0401;PV4=0.386997,0.231809,1,1 GT:PL 0/1:203,0,8
Scaffold_1 545913 . G A 181.127 PASS DP=19;VDB=0.00584348;SGB=-0.683931;RPB=0.01262;MQB=0.0193289;MQSB=0.984335;BQB=0.942222;MQ0F=0.0526316;AF1=1;AC1=2;DP4=3,2,5,8;MQ=28;FQ=-31.9885;PV4=0.607843,0.158543,1,1 GT:PL 1/1:212,5,0
Scaffold_1 546100 . C G 188.01 PASS DP=24;VDB=0.258129;SGB=-0.670168;RPB=0.943785;MQB=0.00181544;MQSB=0.333737;BQB=0.943785;MQ0F=0.125;AF1=0.500158;AC1=1;DP4=4,6,5,5;MQ=34;FQ=6.20452;PV4=1,1,1,0.377183 GT:PL 0/1:218,0,32
Scaffold_1 546151 . A C 181.011 PASS DP=17;VDB=0.38593;SGB=-0.670168;RPB=0.994135;MQB=0.00502104;MQSB=0.221821;BQB=0.809155;MQ0F=0.0588235;AF1=0.500199;AC1=1;DP4=4,2,2,8;MQ=41;FQ=5.46595;PV4=0.118132,1,1,0.143014 GT:PL 0/1:211,0,31
Scaffold_1 546438 . C T 168.01 PASS DP=27;VDB=0.312197;SGB=-0.688148;RPB=0.0615309;MQB=0.0615309;MQSB=0.858022;BQB=0.36113;MQ0F=0.296296;AF1=0.5001;AC1=1;DP4=7,4,9,6;MQ=26;FQ=7.80241;PV4=1,1,1,1 GT:PL 0/1:198,0,34
Scaffold_1 546617 . C T 15.1417 PASS DP=17;VDB=0.663511;SGB=-0.511536;RPB=0.416862;MQB=0.67781;MQSB=0.694267;BQB=0.715111;MQ0F=0.0588235;AF1=0.499992;AC1=1;DP4=4,10,2,1;MQ=45;FQ=18.0829;PV4=0.514706,1,0.329481,0.00180454 GT:PL 0/1:45,0,224
Scaffold_1 546803 . G A 22.0341 PASS DP=17;VDB=0.0941126;SGB=-0.511536;RPB=0.382771;MQB=0.167677;MQSB=0.730444;BQB=0.907354;MQ0F=0.117647;AF1=0.499998;AC1=1;DP4=4,10,0,3;MQ=27;FQ=25.0286;PV4=0.541176,0.491949,1,1 GT:PL 0/1:52,0,149
Scaffold_1 546973 . C T 56.0076 PASS DP=10;VDB=0.192436;SGB=-0.511536;RPB=0.861511;MQB=0.28717;MQSB=0.28717;BQB=0.28717;MQ0F=0;AF1=0.50004;AC1=1;DP4=0,3,3,0;MQ=35;FQ=11.3456;PV4=0.1,1,1,1 GT:PL 0/1:86,0,38
Scaffold_1 573776 . G A 26.0177 PASS DP=13;VDB=0.519801;SGB=-0.511536;RPB=0.920044;MQB=0.0497871;MQSB=0.562708;BQB=0.532481;MQ0F=0;AF1=0.499999;AC1=1;DP4=4,4,3,0;MQ=55;FQ=29.0205;PV4=0.236364,0.153058,3.68537e-11,1 GT:PL 0/1:56,0,204
Scaffold_1 573788 . T C 13.2188 PASS DP=14;VDB=0.52;SGB=-0.453602;RPB=0.5;MQB=0;MQSB=0.727822;BQB=0.875;MQ0F=0;AF1=0.499987;AC1=1;DP4=4,4,2,0;MQ=57;FQ=16.1222;PV4=0.466667,0.354335,6.0538e-10,1 GT:PL 0/1:43,0,232
Scaffold_1 573797 . C A 27.0155 PASS DP=14;VDB=0.509904;SGB=-0.511536;RPB=0.811069;MQB=0.0443614;MQSB=0.506703;BQB=0.898672;MQ0F=0;AF1=0.499999;AC1=1;DP4=4,5,3,0;MQ=56;FQ=30.0194;PV4=0.204545,0.306673,2.61654e-12,1 GT:PL 0/1:57,0,232
Scaffold_1 573802 . T G 15.1417 PASS DP=14;VDB=0.5;SGB=-0.511536;RPB=0.809011;MQB=0.115573;MQSB=0.406082;BQB=0.115573;MQ0F=0;AF1=0.499992;AC1=1;DP4=2,4,3,0;MQ=54;FQ=18.0829;PV4=0.166667,0.0410081,7.41939e-09,0.274285 GT:PL 0/1:45,0,197
Scaffold_1 573806 . T G 42.0073 PASS DP=15;VDB=0.820274;SGB=-0.556411;RPB=0.988166;MQB=0.0211283;MQSB=0.342519;BQB=0.381255;MQ0F=0;AF1=0.5;AC1=1;DP4=4,5,4,0;MQ=55;FQ=45.0154;PV4=0.104895,0.133904,1.13595e-13,0.0406571 GT:PL 0/1:72,0,253
Scaffold_1 573818 . A C 66.0074 PASS DP=16;VDB=0.915812;SGB=-0.590765;RPB=0.89683;MQB=0.011109;MQSB=0.249352;BQB=0.867428;MQ0F=0;AF1=0.5;AC1=1;DP4=4,5,5,0;MQ=54;FQ=69.0155;PV4=0.0859141,0.218385,4.85055e-15,0.0699449 GT:PL 0/1:96,0,242
Scaffold_1 573824 . A G 38.0077 PASS DP=14;VDB=0.814281;SGB=-0.511536;RPB=0.641538;MQB=0.0916482;MQSB=0.333321;BQB=0.916482;MQ0F=0;AF1=0.5;AC1=1;DP4=2,5,3,0;MQ=55;FQ=41.0155;PV4=0.166667,0.320631,5.21436e-10,0.0162277 GT:PL 0/1:68,0,198
Scaffold_1 573845 . G T 33.0091 PASS DP=14;VDB=0.814281;SGB=-0.511536;RPB=0.594025;MQB=0.0497871;MQSB=0.297172;BQB=0.716531;MQ0F=0;AF1=0.5;AC1=1;DP4=2,6,3,0;MQ=55;FQ=36.0162;PV4=0.0606061,0.255079,3.68537e-11,0.413075 GT:PL 0/1:63,0,215
Scaffold_1 573850 . A T 43.0073 PASS DP=14;VDB=0.756056;SGB=-0.556411;RPB=0.697274;MQB=0.0249144;MQSB=0.186356;BQB=0.913799;MQ0F=0;AF1=0.5;AC1=1;DP4=2,6,4,0;MQ=54;FQ=46.0153;PV4=0.0606061,0.221861,1.77373e-12,1 GT:PL 0/1:73,0,196
Scaffold_1 573909 . C G 77.0075 PASS DP=12;VDB=0.725151;SGB=-0.556411;RPB=0.94394;MQB=0.0249144;MQSB=0.0853036;BQB=1;MQ0F=0;AF1=0.5;AC1=1;DP4=0,8,3,1;MQ=54;FQ=80.0156;PV4=0.0181818,1,0,1 GT:PL 0/1:107,0,159
Scaffold_1 573910 . T C 75.0075 PASS DP=12;VDB=0.735663;SGB=-0.556411;RPB=0.94394;MQB=0.0249144;MQSB=0.0853036;BQB=1;MQ0F=0;AF1=0.5;AC1=1;DP4=0,8,3,1;MQ=54;FQ=78.0156;PV4=0.0181818,1,0,1 GT:PL 0/1:105,0,156
Scaffold_1 573943 . A T 70.0074 PASS DP=9;VDB=0.735663;SGB=-0.556411;RPB=0.649731;MQB=0.0812164;MQSB=0.115573;BQB=0.243649;MQ0F=0;AF1=0.5;AC1=1;DP4=0,5,3,1;MQ=52;FQ=72.9983;PV4=0.047619,0.011941,0,0.329314 GT:PL 0/1:100,0,124
Scaffold_1 573953 . C A 29.0123 PASS DP=8;VDB=0.52;SGB=-0.453602;RPB=0.4;MQB=0;MQSB=0.7;BQB=0.8;MQ0F=0;AF1=0.5;AC1=1;DP4=1,4,1,1;MQ=55;FQ=32.0178;PV4=1,1,0,1 GT:PL 0/1:59,0,145
Scaffold_1 573954 . C A 26.0177 PASS DP=7;VDB=0.52;SGB=-0.453602;RPB=0.4;MQB=0;MQSB=0.7;BQB=0.7;MQ0F=0;AF1=0.499999;AC1=1;DP4=1,4,1,1;MQ=55;FQ=29.0205;PV4=1,0.256655,0,1 GT:PL 0/1:56,0,145
Scaffold_1 573956 . T A 26.0177 PASS DP=8;VDB=0.52;SGB=-0.453602;RPB=0.333333;MQB=0;MQSB=0.900802;BQB=0.833333;MQ0F=0;AF1=0.499999;AC1=1;DP4=2,4,1,1;MQ=56;FQ=29.0205;PV4=1,1,0,1 GT:PL 0/1:56,0,172
Scaffold_1 573993 . A C 40.0075 PASS DP=10;VDB=0.868052;SGB=-0.511536;RPB=0.924584;MQB=0.115573;MQSB=0.924584;BQB=0.577865;MQ0F=0;AF1=0.5;AC1=1;DP4=2,4,1,2;MQ=55;FQ=43.0154;PV4=1,0.131705,0.000126095,0.0183596 GT:PL 0/1:70,0,196
Scaffold_1 574009 . G C 27.0155 PASS DP=10;VDB=0.74;SGB=-0.453602;RPB=0.666667;MQB=0;MQSB=0.900802;BQB=0.833333;MQ0F=0;AF1=0.499999;AC1=1;DP4=2,4,1,1;MQ=57;FQ=30.0194;PV4=1,0.301823,0.000695171,1 GT:PL 0/1:57,0,198
Scaffold_1 574061 . C A 74.0075 PASS DP=9;VDB=0.202231;SGB=-0.556411;RPB=0.62023;MQB=0.124046;MQSB=0.333333;BQB=0.992367;MQ0F=0;AF1=0.5;AC1=1;DP4=2,2,0,4;MQ=52;FQ=77.0151;PV4=0.428571,0.208728,0.00038146,1 GT:PL 0/1:104,0,143
Scaffold_1 574063 . C A 74.0075 PASS DP=9;VDB=0.215949;SGB=-0.556411;RPB=0.62023;MQB=0.124046;MQSB=0.333333;BQB=0.868321;MQ0F=0;AF1=0.5;AC1=1;DP4=2,2,0,4;MQ=52;FQ=77.007;PV4=0.428571,0.325896,0.00038146,1 GT:PL 0/1:104,0,131
Scaffold_1 574075 . A G 72.0074 PASS DP=9;VDB=0.215949;SGB=-0.556411;RPB=0.62023;MQB=0.124046;MQSB=0.333333;BQB=0.868321;MQ0F=0;AF1=0.5;AC1=1;DP4=2,2,0,4;MQ=52;FQ=75.0134;PV4=0.428571,0.256784,0.00038146,1 GT:PL 0/1:102,0,135
Scaffold_1 574106 . A G 89.0077 PASS DP=9;VDB=0.292572;SGB=-0.590765;RPB=0.750668;MQB=0.150134;MQSB=1;BQB=0.600535;MQ0F=0;AF1=0.5;AC1=1;DP4=1,2,0,5;MQ=50;FQ=84.2256;PV4=0.375,0.0875023,0.000582285,1 GT:PL 0/1:119,0,112
Scaffold_1 574112 . G T 94.0077 PASS DP=8;VDB=0.300397;SGB=-0.590765;RPB=0.900802;MQB=0.150134;BQB=0.900802;MQ0F=0;AF1=0.5;AC1=1;DP4=0,3,0,5;MQ=50;FQ=55.0151;PV4=1,1,0.000582285,1 GT:PL 0/1:124,0,82
Scaffold_1 574120 . C T 74.0075 PASS DP=8;VDB=0.292572;SGB=-0.590765;RPB=0.900802;MQB=0.150134;BQB=0.450401;MQ0F=0;AF1=0.5;AC1=1;DP4=0,3,0,5;MQ=50;FQ=54.988;PV4=1,0.0764947,0.000582285,1 GT:PL 0/1:104,0,82
Scaffold_1 574127 . G A 71.0074 PASS DP=7;VDB=0.172317;SGB=-0.556411;RPB=0.607698;MQB=0.202566;BQB=0.607698;MQ0F=0;AF1=0.5;AC1=1;DP4=0,3,0,4;MQ=50;FQ=43.012;PV4=1,1,2.71401e-05,1 GT:PL 0/1:101,0,70
Scaffold_1 574165 . C T 68.0074 PASS DP=6;VDB=0.172317;SGB=-0.556411;RPB=0.25;MQB=0;BQB=0.875;MQ0F=0;AF1=0.500006;AC1=1;DP4=0,2,0,4;MQ=48;FQ=19.069;PV4=1,1,0.000281002,0.336454 GT:PL 0/1:98,0,46
Scaffold_1 574179 . T C 46.0099 PASS DP=5;VDB=0.28399;SGB=-0.511536;RPB=1;MQB=1;BQB=1;MQ0F=0;AF1=0.500315;AC1=1;DP4=0,1,0,3;MQ=47;FQ=4.13341;PV4=1,0.333333,0.015752,0.465861 GT:PL 0/1:76,0,29
Scaffold_1 574186 . C T 12.272 PASS DP=4;VDB=0.48;SGB=-0.453602;RPB=0.5;MQB=0;BQB=0.5;MQ0F=0;AF1=0.499984;AC1=1;DP4=0,2,0,2;MQ=52;FQ=15.1163;PV4=1,0.211325,0.00990197,0.442631 GT:PL 0/1:42,0,63
Scaffold_1 576314 . G A 113.264 PASS DP=5;VDB=0.0687819;SGB=-0.590765;MQSB=1;MQ0F=0;AF1=1;AC1=2;DP4=0,0,1,4;MQ=42;FQ=-41.9862 GT:PL 1/1:146,15,0
Scaffold_1 576320 . C T 65.9724 PASS DP=4;VDB=0.148533;SGB=-0.511536;MQ0F=0;AF1=1;AC1=2;DP4=0,0,0,3;MQ=40;FQ=-35.9869 GT:PL 1/1:98,9,0
Scaffold_1 576538 . C G 11.1139 PASS DP=2;VDB=0.58;SGB=-0.453602;MQ0F=0;AF1=1;AC1=2;DP4=0,0,0,2;MQ=33;FQ=-32.9882 GT:PL 1/1:42,6,0
Scaffold_1 577609 . T C 18.8216 PASS DP=2;VDB=0.82;SGB=-0.453602;MQSB=1;MQ0F=0;AF1=1;AC1=2;DP4=0,0,1,1;MQ=29;FQ=-32.988 GT:PL 1/1:50,6,0
Scaffold_1 577697 . G A 11.1139 PASS DP=2;VDB=0.8;SGB=-0.453602;MQ0F=0;AF1=1;AC1=2;DP4=0,0,2,0;MQ=28;FQ=-32.9882 GT:PL 1/1:42,6,0
Scaffold_1 577699 . A T 16.0802 PASS DP=3;VDB=0.845642;SGB=-0.511536;MQ0F=0;AF1=1;AC1=2;DP4=0,0,3,0;MQ=24;FQ=-35.987 GT:PL 1/1:48,9,0
Scaffold_1 577770 . A G 16.0802 PASS DP=3;VDB=0.431015;SGB=-0.511536;MQ0F=0;AF1=1;AC1=2;DP4=0,0,3,0;MQ=24;FQ=-35.987 GT:PL 1/1:48,9,0
Scaffold_1 577993 . C T 199.134 PASS DP=8;VDB=0.118204;SGB=-0.616816;MQSB=0.75;MQ0F=0;AF1=1;AC1=2;DP4=0,0,4,2;MQ=54;FQ=-44.9861 GT:PL 1/1:232,18,0
Scaffold_1 578046 . C T 112.514 PASS DP=6;VDB=0.0356013;SGB=-0.556411;MQSB=1;MQ0F=0;AF1=1;AC1=2;DP4=0,0,3,1;MQ=58;FQ=-38.9864 GT:PL 1/1:145,12,0
Scaffold_1 578082 . G C 45.9722 PASS DP=3;VDB=0.857144;SGB=-0.511536;MQ0F=0;AF1=1;AC1=2;DP4=0,0,0,3;MQ=33;FQ=-35.9869 GT:PL 1/1:78,9,0
Scaffold_1 578086 . C A 42.9723 PASS DP=3;VDB=0.857144;SGB=-0.511536;MQ0F=0;AF1=1;AC1=2;DP4=0,0,0,3;MQ=33;FQ=-35.9869 GT:PL 1/1:75,9,0
Scaffold_1 581571 . A G 42.1928 PASS DP=24;VDB=0.22465;SGB=-0.680642;RPB=0.466776;MQB=0.0211283;MQSB=0.0443614;BQB=0.466776;MQ0F=0.5;AF1=1;AC1=2;DP4=1,7,12,0;MQ=15;FQ=-34.9872;PV4=0.000103199,1,1,0.464423 GT:PL 1/1:74,8,0
Scaffold_1 581672 . G A 21.6739 PASS DP=15;VDB=0.173131;SGB=-0.590765;RPB=0.40926;MQB=0.760054;MQSB=0.186356;BQB=0.935451;MQ0F=0.6;AF1=0.5939;AC1=1;DP4=3,4,3,2;MQ=17;FQ=-22.0132;PV4=1,0.169873,1,1 GT:PL 0/1:51,0,5
Scaffold_1 581676 . G A 17.7183 PASS DP=15;VDB=0.176043;SGB=-0.590765;RPB=0.41985;MQB=0.765017;MQSB=0.342519;BQB=0.958048;MQ0F=0.6;AF1=0.593897;AC1=1;DP4=2,6,3,2;MQ=16;FQ=-22.0133;PV4=0.292929,0.442117,1,1 GT:PL 0/1:47,0,5
Scaffold_1 581745 . C G 18.2836 PASS DP=14;VDB=0.951477;SGB=-0.616816;RPB=0.828239;MQB=0.623736;MQSB=0.0762218;BQB=0.961166;MQ0F=0.571429;AF1=0.526312;AC1=1;DP4=2,5,3,3;MQ=17;FQ=-17.0723;PV4=0.592075,1,1,1 GT:PL 0/1:48,0,10
Scaffold_1 581839 . A C 21.0418 PASS DP=14;VDB=0.913952;SGB=-0.511536;RPB=1;MQB=0.177538;MQSB=0.314383;BQB=0.968368;MQ0F=0.214286;AF1=0.500077;AC1=1;DP4=1,9,2,1;MQ=19;FQ=8.55879;PV4=0.108392,1,1,0.193655 GT:PL 0/1:51,0,35
Scaffold_1 582993 . C A 31.0104 PASS DP=5;VDB=0.48;SGB=-0.453602;RPB=1;MQB=1;MQSB=1;BQB=1;MQ0F=0;AF1=0.5;AC1=1;DP4=2,1,0,2;MQ=60;FQ=34.0164;PV4=0.4,1,1,0.255015 GT:PL 0/1:61,0,101
Scaffold_1 584985 . C T 28.7701 PASS DP=3;VDB=0.26;SGB=-0.453602;MQSB=1;MQ0F=0;AF1=1;AC1=2;DP4=0,0,1,1;MQ=32;FQ=-32.988 GT:PL 1/1:60,6,0
Scaffold_1 585736 . C T 35.7656 PASS DP=2;VDB=0.26;SGB=-0.453602;MQ0F=0;AF1=1;AC1=2;DP4=0,0,2,0;MQ=60;FQ=-32.988 GT:PL 1/1:67,6,0
Scaffold_1 585737 . G A 39.765 PASS DP=2;VDB=0.26;SGB=-0.453602;MQ0F=0;AF1=1;AC1=2;DP4=0,0,2,0;MQ=60;FQ=-32.988 GT:PL 1/1:71,6,0
Scaffold_1 598696 . C T 222.003 PASS DP=14;VDB=0.134895;SGB=-0.676189;MQSB=0.950952;MQ0F=0;AF1=1;AC1=2;DP4=0,0,5,6;MQ=60;FQ=-59.9861 GT:PL 1/1:255,33,0
Scaffold_1 602290 . G C 26.0177 PASS DP=7;VDB=0.02;SGB=-0.453602;RPB=0.75;MQB=0;BQB=0.5;MQ0F=0;AF1=0.499999;AC1=1;DP4=0,4,0,2;MQ=54;FQ=29.0202;PV4=1,1,0,1 GT:PL 0/1:56,0,99
Scaffold_1 602298 . C T 23.0285 PASS DP=7;VDB=0.02;SGB=-0.453602;RPB=1;MQB=0;BQB=0.875;MQ0F=0;AF1=0.499999;AC1=1;DP4=0,4,0,2;MQ=54;FQ=26.0257;PV4=1,1,0,1 GT:PL 0/1:53,0,99
Scaffold_1 602300 . G A 23.0285 PASS DP=7;VDB=0.02;SGB=-0.453602;RPB=0.8;MQB=0;BQB=0.4;MQ0F=0;AF1=0.499999;AC1=1;DP4=0,5,0,2;MQ=55;FQ=26.0258;PV4=1,1,0,1 GT:PL 0/1:53,0,109
Scaffold_1 602302 . G T 16.1143 PASS DP=7;VDB=0.02;SGB=-0.453602;RPB=0.8;MQB=0;BQB=0.6;MQ0F=0;AF1=0.499994;AC1=1;DP4=0,5,0,2;MQ=55;FQ=19.069;PV4=1,0.116786,0,1 GT:PL 0/1:46,0,125
Scaffold_1 602314 . G A 23.0285 PASS DP=7;VDB=0.02;SGB=-0.453602;RPB=0.4;MQB=0;BQB=0.8;MQ0F=0;AF1=0.499999;AC1=1;DP4=0,5,0,2;MQ=55;FQ=26.0258;PV4=1,1,0,0.0586934 GT:PL 0/1:53,0,125
Scaffold_1 602319 . C G 29.0123 PASS DP=7;VDB=0.02;SGB=-0.453602;RPB=0;MQB=0;BQB=1;MQ0F=0;AF1=0.5;AC1=1;DP4=0,3,0,2;MQ=53;FQ=32.0134;PV4=1,1,0,0.136114 GT:PL 0/1:59,0,89
Scaffold_1 615666 . A G 18.0749 PASS DP=7;VDB=0.02;SGB=-0.453602;RPB=0;MQB=1;MQSB=1.01283;BQB=1;MQ0F=0;AF1=0.499996;AC1=1;DP4=1,4,2,0;MQ=60;FQ=21.0492;PV4=0.142857,1,1,1 GT:PL 0/1:48,0,132
Scaffold_1 615682 . A C 18.0749 PASS DP=9;VDB=0.02;SGB=-0.453602;RPB=0.4;MQB=1;MQSB=1.01283;BQB=1;MQ0F=0;AF1=0.499996;AC1=1;DP4=1,4,2,0;MQ=60;FQ=21.0492;PV4=0.142857,1,1,1 GT:PL 0/1:48,0,132
Scaffold_1 633895 . G A 51.0072 PASS DP=9;VDB=0.970411;SGB=-0.511536;RPB=0.900802;MQB=0.450401;MQSB=0.600535;BQB=0.600535;MQ0F=0;AF1=0.5;AC1=1;DP4=2,3,3,0;MQ=56;FQ=54.0153;PV4=0.196429,1,0.0228549,0.0398299 GT:PL 0/1:81,0,143
Scaffold_1 633912 . G A 74.0075 PASS DP=13;VDB=0.0256605;SGB=-0.590765;RPB=0.591555;MQB=0.213769;MQSB=0.651439;BQB=0.547344;MQ0F=0;AF1=0.5;AC1=1;DP4=4,4,5,0;MQ=56;FQ=77.0156;PV4=0.104895,1,0.0152007,0.467823 GT:PL 0/1:104,0,200
Scaffold_1 633944 . G A 89.0077 PASS DP=13;VDB=0.0194361;SGB=-0.616816;RPB=0.470358;MQB=0.378331;MQSB=0.748798;BQB=0.899815;MQ0F=0;AF1=0.5;AC1=1;DP4=4,3,6,0;MQ=56;FQ=92.0158;PV4=0.192308,1,0.0341052,1 GT:PL 0/1:119,0,185
Scaffold_1 633994 . G A 158.009 PASS DP=17;VDB=0.295648;SGB=-0.651104;RPB=0.915545;MQB=0.110153;MQSB=0.990991;BQB=0.915545;MQ0F=0;AF1=0.5;AC1=1;DP4=6,2,7,1;MQ=54;FQ=158.892;PV4=1,1,0.00638082,1 GT:PL 0/1:188,0,190
Scaffold_1 633995 . C T 155.008 PASS DP=17;VDB=0.310231;SGB=-0.651104;RPB=0.915545;MQB=0.110153;MQSB=0.990991;BQB=0.951579;MQ0F=0;AF1=0.5;AC1=1;DP4=6,2,7,1;MQ=54;FQ=156.252;PV4=1,1,0.00638082,1 GT:PL 0/1:185,0,188
Scaffold_1 634032 . A G 153.008 PASS DP=19;VDB=0.447786;SGB=-0.651104;RPB=0.0361623;MQB=0.0286491;MQSB=0.495715;BQB=0.539681;MQ0F=0;AF1=0.5;AC1=1;DP4=9,1,6,2;MQ=54;FQ=143.751;PV4=0.558824,1,0.000397255,0.468446 GT:PL 0/1:183,0,171
Scaffold_1 634072 . G A 141.008 PASS DP=21;VDB=0.784517;SGB=-0.651104;RPB=0.8274;MQB=0.00438758;MQSB=0.602186;BQB=0.511029;MQ0F=0;AF1=0.5;AC1=1;DP4=10,3,4,4;MQ=53;FQ=144.016;PV4=0.345752,1,9.72556e-07,1 GT:PL 0/1:171,0,249
Scaffold_1 634081 . G A 115.008 PASS DP=21;VDB=0.536793;SGB=-0.636426;RPB=0.992961;MQB=0.00150344;MQSB=0.66019;BQB=0.382304;MQ0F=0;AF1=0.5;AC1=1;DP4=10,3,3,4;MQ=53;FQ=118.016;PV4=0.173581,1,3.63971e-09,1 GT:PL 0/1:145,0,248
Scaffold_1 634088 . G T 115.008 PASS DP=22;VDB=0.614988;SGB=-0.651104;RPB=0.999345;MQB=0.00083264;MQSB=0.836852;BQB=0.728107;MQ0F=0;AF1=0.5;AC1=1;DP4=10,3,4,4;MQ=51;FQ=118.016;PV4=0.345752,1,1.28921e-07,0.494878 GT:PL 0/1:145,0,242
Scaffold_1 634096 . G A 113.008 PASS DP=22;VDB=0.617267;SGB=-0.651104;RPB=0.999345;MQB=0.00083264;MQSB=0.646383;BQB=0.909914;MQ0F=0;AF1=0.5;AC1=1;DP4=11,2,4,4;MQ=51;FQ=116.016;PV4=0.146174,1,1.28921e-07,0.242304 GT:PL 0/1:143,0,228
Scaffold_1 634123 . T C 94.0077 PASS DP=21;VDB=0.248351;SGB=-0.636426;RPB=0.699673;MQB=0.0018363;MQSB=0.991383;BQB=0.334958;MQ0F=0;AF1=0.5;AC1=1;DP4=9,3,4,3;MQ=52;FQ=97.0159;PV4=0.616873,1,3.40999e-07,1 GT:PL 0/1:124,0,240
Scaffold_1 634136 . A T 65.0073 PASS DP=19;VDB=0.19611;SGB=-0.616816;RPB=0.627894;MQB=0.0028799;MQSB=0.879351;BQB=0.925071;MQ0F=0;AF1=0.5;AC1=1;DP4=8,5,4,2;MQ=53;FQ=68.0155;PV4=1,0.318386,1.18555e-07,1 GT:PL 0/1:95,0,255
Scaffold_1 634137 . C T 68.0074 PASS DP=19;VDB=0.186688;SGB=-0.616816;RPB=0.755254;MQB=0.00339922;MQSB=0.817948;BQB=0.995624;MQ0F=0;AF1=0.5;AC1=1;DP4=7,5,4,2;MQ=52;FQ=71.0155;PV4=1,1,3.23082e-07,1 GT:PL 0/1:98,0,255
Scaffold_1 634138 . A G 71.0074 PASS DP=19;VDB=0.186688;SGB=-0.616816;RPB=0.603475;MQB=0.00408677;MQSB=0.737299;BQB=0.902783;MQ0F=0;AF1=0.5;AC1=1;DP4=6,5,4,2;MQ=52;FQ=74.0156;PV4=1,0.454461,8.83604e-07,1 GT:PL 0/1:101,0,252
Scaffold_1 634191 . T G 16.1143 PASS DP=13;VDB=0.519801;SGB=-0.511536;RPB=0.979382;MQB=0.0497871;MQSB=0.655816;BQB=0.655816;MQ0F=0;AF1=0.499994;AC1=1;DP4=5,3,3,0;MQ=54;FQ=19.069;PV4=0.490909,1,0.00040023,1 GT:PL 0/1:46,0,204
Scaffold_1 634220 . T C 44.0073 PASS DP=15;VDB=0.539554;SGB=-0.511536;RPB=0.944459;MQB=0.040184;MQSB=0.976181;BQB=0.314383;MQ0F=0;AF1=0.5;AC1=1;DP4=6,4,2,1;MQ=56;FQ=47.0153;PV4=1,1,5.15872e-19,1 GT:PL 0/1:74,0,224
Scaffold_1 634234 . G A 29.0123 PASS DP=15;VDB=0.519801;SGB=-0.511536;RPB=0.599223;MQB=0.0368832;MQSB=0.834543;BQB=0.823708;MQ0F=0;AF1=0.5;AC1=1;DP4=5,6,2,1;MQ=56;FQ=32.0178;PV4=1,1,1.15149e-20,1 GT:PL 0/1:59,0,243
Scaffold_1 634235 . G A 34.0087 PASS DP=15;VDB=0.519801;SGB=-0.511536;RPB=0.599223;MQB=0.0368832;MQSB=0.834543;BQB=0.896649;MQ0F=0;AF1=0.5;AC1=1;DP4=5,6,2,1;MQ=56;FQ=37.016;PV4=1,1,1.15149e-20,1 GT:PL 0/1:64,0,255
Scaffold_1 634263 . C A 11.3381 PASS DP=17;VDB=0.52;SGB=-0.453602;RPB=0.454545;MQB=0;MQSB=0.976181;BQB=0.363636;MQ0F=0;AF1=0.49998;AC1=1;DP4=4,7,1,1;MQ=57;FQ=14.1838;PV4=1,1,0,1 GT:PL 0/1:41,0,255
Scaffold_1 634272 . T C 31.0104 PASS DP=18;VDB=0.92749;SGB=-0.556411;RPB=0.730444;MQB=0.087379;MQSB=0.79189;BQB=0.338465;MQ0F=0;AF1=0.5;AC1=1;DP4=5,8,2,2;MQ=56;FQ=34.0168;PV4=1,1,0.000379346,0.121681 GT:PL 0/1:61,0,254
Scaffold_1 634275 . T G 36.0081 PASS DP=18;VDB=0.92749;SGB=-0.556411;RPB=0.658617;MQB=0.0982429;MQSB=0.845852;BQB=0.619153;MQ0F=0;AF1=0.5;AC1=1;DP4=5,6,2,2;MQ=56;FQ=39.0157;PV4=1,1,0.00102819,0.148783 GT:PL 0/1:66,0,233
Scaffold_1 634281 . G A 30.0112 PASS DP=19;VDB=0.95353;SGB=-0.556411;RPB=0.90252;MQB=0.0131237;MQSB=0.715702;BQB=0.428375;MQ0F=0;AF1=0.5;AC1=1;DP4=6,7,3,1;MQ=55;FQ=33.0172;PV4=0.576471,1,7.04347e-07,0.125826 GT:PL 0/1:60,0,255
Scaffold_1 634291 . C T 52.0072 PASS DP=20;VDB=0.901078;SGB=-0.616816;RPB=0.700989;MQB=0.0193054;MQSB=0.663573;BQB=0.94769;MQ0F=0;AF1=0.5;AC1=1;DP4=4,8,3,3;MQ=53;FQ=55.0154;PV4=0.626697,1,4.36277e-05,1 GT:PL 0/1:82,0,255
Scaffold_1 634329 . G T 59.0073 PASS DP=18;VDB=0.299032;SGB=-0.616816;RPB=0.806612;MQB=0.0193054;MQSB=0.974693;BQB=0.93223;MQ0F=0;AF1=0.5;AC1=1;DP4=5,7,2,4;MQ=53;FQ=62.0154;PV4=1,1,4.36277e-05,1 GT:PL 0/1:89,0,255
Scaffold_1 634343 . C T 19.061 PASS DP=18;VDB=0.0615984;SGB=-0.590765;RPB=0.818731;MQB=0.0407622;MQSB=0.92664;BQB=0.987578;MQ0F=0;AF1=0.499997;AC1=1;DP4=5,7,2,3;MQ=54;FQ=22.0421;PV4=1,0.176229,5.50926e-05,1 GT:PL 0/1:49,0,255
Scaffold_1 634436 . T A 42.0073 PASS DP=17;VDB=0.155969;SGB=-0.616816;RPB=0.994962;MQB=0.00408677;MQSB=0.122456;BQB=0.940006;MQ0F=0;AF1=0.5;AC1=1;DP4=7,4,0,6;MQ=51;FQ=45.0154;PV4=0.0345023,1,5.59703e-09,1 GT:PL 0/1:72,0,239
Scaffold_1 634439 . T C 45.0072 PASS DP=17;VDB=0.155969;SGB=-0.616816;RPB=0.994962;MQB=0.00408677;MQSB=0.122456;BQB=0.723806;MQ0F=0;AF1=0.5;AC1=1;DP4=7,4,0,6;MQ=51;FQ=48.0153;PV4=0.0345023,1,5.59703e-09,1 GT:PL 0/1:75,0,239
Scaffold_1 634496 . C A 25.0205 PASS DP=17;VDB=0.530999;SGB=-0.616816;RPB=0.522814;MQB=0.00502104;MQSB=0.0845351;BQB=0.686279;MQ0F=0;AF1=0.499999;AC1=1;DP4=7,3,0,6;MQ=49;FQ=28.0219;PV4=0.0113636,1,7.24189e-09,0.41716 GT:PL 0/1:55,0,211
Scaffold_1 653655 . C T 13.2188 PASS DP=10;VDB=0.02;SGB=-0.453602;RPB=0.25;MQB=1;MQSB=1;BQB=0.8125;MQ0F=0;AF1=0.499987;AC1=1;DP4=2,6,0,2;MQ=60;FQ=16.1222;PV4=1,0.443578,1,0.152224 GT:PL 0/1:43,0,204
Scaffold_1 661713 . G A 22.0341 PASS DP=9;VDB=0.02;SGB=-0.453602;RPB=0;MQB=1;MQSB=0.900802;BQB=0.5;MQ0F=0;AF1=0.499998;AC1=1;DP4=3,3,0,2;MQ=60;FQ=25.0286;PV4=0.464286,1,1,1 GT:PL 0/1:52,0,164
Scaffold_1 665970 . T C 15.1078 PASS DP=3;VDB=0.607612;SGB=-0.511536;MQ0F=0;AF1=1;AC1=2;DP4=0,0,0,3;MQ=19;FQ=-35.987 GT:PL 1/1:47,9,0
Scaffold_1 673010 . G A 59.2724 PASS DP=15;VDB=0.170249;SGB=-0.590765;RPB=0.829029;MQB=0.129785;MQSB=0.431591;BQB=0.0497871;MQ0F=0.266667;AF1=0.533586;AC1=1;DP4=1,9,5,0;MQ=22;FQ=-18.0541;PV4=0.001998,1,1,1 GT:PL 0/1:89,0,9
Scaffold_1 680463 . C G 104.008 PASS DP=18;VDB=0.00936936;SGB=-0.651104;RPB=0.352866;MQB=1;MQSB=1;BQB=0.328812;MQ0F=0;AF1=0.5;AC1=1;DP4=5,4,8,0;MQ=60;FQ=107.016;PV4=0.0823529,0.151045,1,0.42877 GT:PL 0/1:134,0,220
Scaffold_1 680482 . A G 119.008 PASS DP=19;VDB=0.00186832;SGB=-0.651104;RPB=0.965097;MQB=1;MQSB=1;BQB=0.593309;MQ0F=0;AF1=0.5;AC1=1;DP4=6,4,8,0;MQ=60;FQ=122.016;PV4=0.0915033,1,1,1 GT:PL 0/1:149,0,236
Scaffold_1 680485 . G A 81.0075 PASS DP=19;VDB=0.00677264;SGB=-0.636426;RPB=0.840907;MQB=1;MQSB=1;BQB=0.19389;MQ0F=0;AF1=0.5;AC1=1;DP4=7,4,7,0;MQ=60;FQ=84.0157;PV4=0.119281,0.032718,1,1 GT:PL 0/1:111,0,251
Scaffold_1 680498 . A C 103.008 PASS DP=18;VDB=0.0036287;SGB=-0.651104;RPB=0.72634;MQB=1;MQSB=1;BQB=0.593309;MQ0F=0;AF1=0.5;AC1=1;DP4=6,4,8,0;MQ=60;FQ=106.016;PV4=0.0915033,0.137696,1,1 GT:PL 0/1:133,0,237
Scaffold_1 680507 . C A 100.008 PASS DP=17;VDB=0.000727723;SGB=-0.636426;RPB=0.79189;MQB=1;MQSB=1;BQB=0.84246;MQ0F=0;AF1=0.5;AC1=1;DP4=6,4,7,0;MQ=60;FQ=103.016;PV4=0.102941,0.360828,1,1 GT:PL 0/1:130,0,236
Scaffold_1 680513 . C G 146.008 PASS DP=16;VDB=0.0258883;SGB=-0.651104;RPB=0.513103;MQB=1;MQSB=1;BQB=0.819936;MQ0F=0;AF1=0.5;AC1=1;DP4=6,2,7,1;MQ=60;FQ=147.252;PV4=1,1,1,1 GT:PL 0/1:176,0,179
Scaffold_1 680531 . C T 114.008 PASS DP=16;VDB=0.0125979;SGB=-0.616816;RPB=0.0253494;MQB=1;MQSB=1;BQB=0.981425;MQ0F=0;AF1=0.5;AC1=1;DP4=6,2,5,1;MQ=60;FQ=117.016;PV4=1,1,1,1 GT:PL 0/1:144,0,192
Scaffold_1 680542 . G A 127.008 PASS DP=16;VDB=9.39137e-05;SGB=-0.651104;RPB=0.00352788;MQB=1;MQSB=1;BQB=0.576102;MQ0F=0;AF1=0.5;AC1=1;DP4=6,2,7,1;MQ=60;FQ=129.989;PV4=1,0.239633,1,1 GT:PL 0/1:157,0,179
Scaffold_1 680573 . G A 77.0075 PASS DP=18;VDB=0.0131987;SGB=-0.590765;RPB=0.193441;MQB=1;MQSB=1;BQB=0.697005;MQ0F=0;AF1=0.5;AC1=1;DP4=9,2,5,0;MQ=60;FQ=80.0157;PV4=1,1,1,1 GT:PL 0/1:107,0,223
Scaffold_1 680584 . G A 98.0078 PASS DP=19;VDB=0.0382226;SGB=-0.616816;RPB=0.555306;MQB=1;MQSB=1;BQB=0.887703;MQ0F=0;AF1=0.5;AC1=1;DP4=7,3,5,1;MQ=60;FQ=101.016;PV4=1,0.277664,1,1 GT:PL 0/1:128,0,225
Scaffold_1 680591 . A C 125.008 PASS DP=20;VDB=0.0520917;SGB=-0.636426;RPB=0.470332;MQB=1;MQSB=1;BQB=0.683926;MQ0F=0;AF1=0.5;AC1=1;DP4=10,3,5,2;MQ=60;FQ=128.016;PV4=1,1,1,1 GT:PL 0/1:155,0,234
Scaffold_1 680616 . A G 111.008 PASS DP=18;VDB=0.128355;SGB=-0.590765;RPB=0.992528;MQB=1;MQSB=1;BQB=0.998127;MQ0F=0;AF1=0.5;AC1=1;DP4=8,2,4,1;MQ=60;FQ=114.016;PV4=1,1,1,1 GT:PL 0/1:141,0,235
Scaffold_1 680636 . G A 184.009 PASS DP=20;VDB=0.0773561;SGB=-0.662043;RPB=0.650623;MQB=1;MQSB=1;BQB=0.991266;MQ0F=0;AF1=0.5;AC1=1;DP4=7,2,4,5;MQ=60;FQ=182.893;PV4=0.334842,0.282118,1,0.468577 GT:PL 0/1:214,0,212
Scaffold_1 680638 . C T 164.009 PASS DP=21;VDB=0.14143;SGB=-0.651104;RPB=0.938795;MQB=1;MQSB=1;BQB=0.984335;MQ0F=0;AF1=0.5;AC1=1;DP4=8,2,3,5;MQ=60;FQ=167.016;PV4=0.144796,0.191321,1,1 GT:PL 0/1:194,0,232
Scaffold_1 680657 . A C 225.009 PASS DP=23;VDB=0.023324;SGB=-0.680642;RPB=0.980625;MQB=1;MQSB=1;BQB=0.65306;MQ0F=0;AF1=0.5;AC1=1;DP4=8,2,4,8;MQ=60;FQ=195.015;PV4=0.0427313,0.0763446,1,1 GT:PL 0/1:255,0,222
Scaffold_1 680661 . C T 180.009 PASS DP=23;VDB=0.0100664;SGB=-0.670168;RPB=0.982301;MQB=1;MQSB=1;BQB=0.813484;MQ0F=0;AF1=0.5;AC1=1;DP4=8,2,2,8;MQ=60;FQ=182.847;PV4=0.0230141,0.160489,1,1 GT:PL 0/1:210,0,224
Scaffold_1 680676 . G T 202.009 PASS DP=24;VDB=0.00164973;SGB=-0.670168;RPB=0.54842;MQB=1;MQSB=1;BQB=0.813484;MQ0F=0.0416667;AF1=0.5;AC1=1;DP4=7,3,3,7;MQ=60;FQ=203.562;PV4=0.178895,0.424512,1,1 GT:PL 0/1:232,0,236
Scaffold_1 680683 . C T 186.009 PASS DP=24;VDB=0.000741207;SGB=-0.662043;RPB=0.668089;MQB=1;MQSB=1;BQB=0.970446;MQ0F=0.0416667;AF1=0.5;AC1=1;DP4=7,3,2,7;MQ=60;FQ=188.983;PV4=0.0697785,0.488484,1,1 GT:PL 0/1:216,0,237
Scaffold_1 680690 . G A 223.009 PASS DP=24;VDB=0.000103908;SGB=-0.676189;RPB=0.225773;MQB=1;MQSB=1;BQB=0.99938;MQ0F=0.0416667;AF1=0.5;AC1=1;DP4=7,3,3,8;MQ=60;FQ=214.685;PV4=0.0861089,0.460834,1,0.342683 GT:PL 0/1:253,0,242
Scaffold_1 680704 . C T 159.009 PASS DP=21;VDB=6.71664e-05;SGB=-0.651104;RPB=0.0562679;MQB=1;MQSB=1;BQB=0.86753;MQ0F=0.047619;AF1=0.5;AC1=1;DP4=6,4,1,7;MQ=60;FQ=162.017;PV4=0.0656109,0.474062,1,1 GT:PL 0/1:189,0,251
Scaffold_1 680705 . G A 187.009 PASS DP=22;VDB=5.50004e-05;SGB=-0.662043;RPB=0.0329312;MQB=1;MQSB=1;BQB=1;MQ0F=0.0454545;AF1=0.5;AC1=1;DP4=6,4,2,7;MQ=60;FQ=190.014;PV4=0.169802,1,1,1 GT:PL 0/1:217,0,249
Scaffold_1 680790 . T C 74.0075 PASS DP=13;VDB=0.0467807;SGB=-0.556411;RPB=0.096972;MQB=0.785785;MQSB=0.935229;BQB=0.826565;MQ0F=0;AF1=0.5;AC1=1;DP4=3,6,2,2;MQ=58;FQ=77.0156;PV4=1,1,0.069705,0.22729 GT:PL 0/1:104,0,229
Scaffold_1 680792 . T C 74.0075 PASS DP=13;VDB=0.0467807;SGB=-0.556411;RPB=0.096972;MQB=0.785785;MQSB=0.935229;BQB=0.953497;MQ0F=0;AF1=0.5;AC1=1;DP4=3,6,2,2;MQ=58;FQ=77.0156;PV4=1,1,0.069705,0.349796 GT:PL 0/1:104,0,232
Scaffold_1 680794 . A G 74.0075 PASS DP=13;VDB=0.0516381;SGB=-0.556411;RPB=0.096972;MQB=0.785785;MQSB=0.935229;BQB=0.953497;MQ0F=0;AF1=0.5;AC1=1;DP4=3,6,2,2;MQ=58;FQ=77.0156;PV4=1,1,0.069705,0.495256 GT:PL 0/1:104,0,230
Scaffold_1 680798 . G A 63.0073 PASS DP=12;VDB=0.0516381;SGB=-0.556411;RPB=0.125315;MQB=0.793923;MQSB=0.896474;BQB=0.793923;MQ0F=0;AF1=0.5;AC1=1;DP4=3,5,2,2;MQ=58;FQ=66.0155;PV4=1,0.0834448,0.0834448,0.475011 GT:PL 0/1:93,0,220
Scaffold_1 680836 . T G 108.008 PASS DP=12;VDB=0.130743;SGB=-0.590765;RPB=0.0974428;MQB=0.838008;MQSB=0.896474;BQB=0.95494;MQ0F=0;AF1=0.5;AC1=1;DP4=3,4,2,3;MQ=58;FQ=111.016;PV4=1,1,0.127491,1 GT:PL 0/1:138,0,200
Scaffold_1 680840 . T C 108.008 PASS DP=12;VDB=0.130743;SGB=-0.590765;RPB=0.13642;MQB=0.838008;MQSB=0.896474;BQB=0.506703;MQ0F=0;AF1=0.5;AC1=1;DP4=3,4,2,3;MQ=58;FQ=111.016;PV4=1,1,0.127491,1 GT:PL 0/1:138,0,187
Scaffold_1 680845 . T C 107.008 PASS DP=11;VDB=0.133161;SGB=-0.590765;RPB=0.208021;MQB=0.8618;MQSB=0.891517;BQB=0.950952;MQ0F=0;AF1=0.5;AC1=1;DP4=3,3,2,3;MQ=58;FQ=110.013;PV4=1,0.427966,0.148333,1 GT:PL 0/1:137,0,168
Scaffold_1 680846 . G A 110.008 PASS DP=12;VDB=0.130743;SGB=-0.590765;RPB=0.297172;MQB=0.8618;MQSB=0.891517;BQB=0.8618;MQ0F=0;AF1=0.5;AC1=1;DP4=3,3,2,3;MQ=58;FQ=113.015;PV4=1,1,0.148333,1 GT:PL 0/1:140,0,175
Scaffold_1 680848 . T C 99.0078 PASS DP=12;VDB=0.125998;SGB=-0.590765;RPB=0.297172;MQB=0.8618;MQSB=0.891517;BQB=0.564628;MQ0F=0;AF1=0.5;AC1=1;DP4=3,3,2,3;MQ=58;FQ=101.999;PV4=1,1,0.148333,1 GT:PL 0/1:129,0,153
Scaffold_1 680866 . C T 141.008 PASS DP=10;VDB=0.537869;SGB=-0.616816;RPB=0.809011;MQB=0.924584;MQSB=0.89338;BQB=0.924584;MQ0F=0;AF1=0.5;AC1=1;DP4=3,0,2,4;MQ=57;FQ=52.0153;PV4=0.166667,0.258245,0.258245,1 GT:PL 0/1:171,0,79
Scaffold_1 680885 . T C 127.008 PASS DP=9;VDB=0.733113;SGB=-0.616816;RPB=0.833333;MQB=1;MQSB=0.900802;BQB=0.583333;MQ0F=0;AF1=0.500025;AC1=1;DP4=1,1,2,4;MQ=60;FQ=13.2265;PV4=1,1,1,1 GT:PL 0/1:157,0,40
Scaffold_1 680909 . C T 153.008 PASS DP=11;VDB=0.879935;SGB=-0.636426;RPB=0.824834;MQB=0.916482;MQSB=0.916482;BQB=0.0916482;MQ0F=0;AF1=0.5;AC1=1;DP4=1,2,2,5;MQ=60;FQ=30.0194;PV4=1,1,1,0.114007 GT:PL 0/1:183,0,57
Scaffold_1 680915 . G A 73.0074 PASS DP=10;VDB=0.497461;SGB=-0.556411;RPB=0.372138;MQB=0.992367;MQSB=0.900802;BQB=0.992367;MQ0F=0;AF1=0.5;AC1=1;DP4=1,3,2,2;MQ=60;FQ=70.5601;PV4=1,1,1,0.139118 GT:PL 0/1:103,0,99
Scaffold_1 680916 . A G 115.008 PASS DP=10;VDB=0.773942;SGB=-0.616816;RPB=0.924584;MQB=0.924584;MQSB=0.924584;BQB=0.924584;MQ0F=0;AF1=0.5;AC1=1;DP4=1,2,2,4;MQ=60;FQ=41.0155;PV4=1,1,1,0.322146 GT:PL 0/1:145,0,68
Scaffold_1 680930 . C T 54.0072 PASS DP=10;VDB=0.364077;SGB=-0.511536;RPB=0.810265;MQB=1.01283;MQSB=1;BQB=0.202566;MQ0F=0;AF1=0.5;AC1=1;DP4=1,3,0,3;MQ=60;FQ=48.3764;PV4=1,1,1,1 GT:PL 0/1:84,0,76
Scaffold_1 680934 . C T 71.0074 PASS DP=10;VDB=0.168287;SGB=-0.556411;RPB=0.243649;MQB=0.974597;BQB=0.0812164;MQ0F=0;AF1=0.5;AC1=1;DP4=0,5,0,4;MQ=60;FQ=51.988;PV4=1,1,1,1 GT:PL 0/1:101,0,79
Scaffold_1 680935 . C A 71.0074 PASS DP=10;VDB=0.172317;SGB=-0.556411;RPB=0.243649;MQB=0.974597;BQB=0.0812164;MQ0F=0;AF1=0.5;AC1=1;DP4=0,5,0,4;MQ=60;FQ=61.7497;PV4=1,1,1,1 GT:PL 0/1:101,0,89
Scaffold_1 680936 . A T 74.0075 PASS DP=10;VDB=0.180561;SGB=-0.556411;RPB=0.243649;MQB=0.974597;BQB=0.162433;MQ0F=0;AF1=0.5;AC1=1;DP4=0,5,0,4;MQ=60;FQ=64.7497;PV4=1,1,1,1 GT:PL 0/1:104,0,92
Scaffold_1 680937 . C T 71.0074 PASS DP=11;VDB=0.168287;SGB=-0.556411;RPB=0.243649;MQB=0.974597;BQB=0.89338;MQ0F=0;AF1=0.5;AC1=1;DP4=0,5,0,4;MQ=60;FQ=73.8032;PV4=1,1,1,1 GT:PL 0/1:101,0,114
Scaffold_1 680966 . A C 37.0079 PASS DP=15;VDB=0.185719;SGB=-0.511536;RPB=0.184981;MQB=0.716531;MQSB=1;BQB=0.979382;MQ0F=0;AF1=0.5;AC1=1;DP4=1,7,0,3;MQ=59;FQ=40.0156;PV4=1,1,0.0519441,1 GT:PL 0/1:67,0,174
Scaffold_1 680974 . G A 60.0073 PASS DP=15;VDB=0.0349142;SGB=-0.590765;RPB=0.057736;MQB=0.472367;MQSB=0.846154;BQB=0.79702;MQ0F=0;AF1=0.5;AC1=1;DP4=2,8,0,5;MQ=59;FQ=63.0154;PV4=0.52381,0.174173,0.0415175,0.325214 GT:PL 0/1:90,0,209
Scaffold_1 684271 . G T 54.0072 PASS DP=13;VDB=0.02;SGB=-0.453602;RPB=0.285714;MQB=1;MQSB=0.924584;BQB=0;MQ0F=0;AF1=0.5;AC1=1;DP4=4,3,2,0;MQ=60;FQ=57.0154;PV4=0.5,1,1,1 GT:PL 0/1:84,0,180
Scaffold_1 686904 . G T 11.3381 PASS DP=17;VDB=0.152777;SGB=-0.556411;RPB=0.697471;MQB=0.0144756;MQSB=0.624635;BQB=0.88901;MQ0F=0.0588235;AF1=0.49998;AC1=1;DP4=8,4,4,0;MQ=54;FQ=14.1838;PV4=0.516484,0.390364,8.57852e-07,1 GT:PL 0/1:41,0,255
Scaffold_1 686932 . A G 19.061 PASS DP=16;VDB=0.160409;SGB=-0.556411;RPB=0.988166;MQB=0.0211283;MQSB=0.597928;BQB=0.898397;MQ0F=0.0625;AF1=0.499997;AC1=1;DP4=6,3,4,0;MQ=52;FQ=22.0421;PV4=0.496504,0.203749,1.72948e-05,1 GT:PL 0/1:49,0,255
Scaffold_1 686938 . G A 19.061 PASS DP=16;VDB=0.160409;SGB=-0.556411;RPB=0.997028;MQB=0.0211283;MQSB=0.597928;BQB=0.97357;MQ0F=0.0625;AF1=0.499997;AC1=1;DP4=6,3,4,0;MQ=52;FQ=22.0421;PV4=0.496504,0.252825,1.72948e-05,1 GT:PL 0/1:49,0,251
Scaffold_1 686943 . A G 19.061 PASS DP=16;VDB=0.152777;SGB=-0.556411;RPB=0.742584;MQB=0.0211283;MQSB=0.636364;BQB=0.988166;MQ0F=0.0625;AF1=0.499997;AC1=1;DP4=7,2,4,0;MQ=52;FQ=22.0421;PV4=1,0.213149,1.72948e-05,1 GT:PL 0/1:49,0,244
Scaffold_1 687158 . A G 17.0924 PASS DP=14;VDB=0.732596;SGB=-0.511536;RPB=0.594025;MQB=0.0497871;MQSB=0.297172;BQB=0.829029;MQ0F=0;AF1=0.499995;AC1=1;DP4=6,2,0,3;MQ=54;FQ=20.058;PV4=0.0606061,1,6.2066e-06,1 GT:PL 0/1:47,0,188
Scaffold_1 687181 . C T 18.0749 PASS DP=12;VDB=0.724364;SGB=-0.511536;RPB=0.290822;MQB=0.0443614;MQSB=0.506703;BQB=0.540433;MQ0F=0;AF1=0.499996;AC1=1;DP4=5,4,0,3;MQ=54;FQ=21.0492;PV4=0.204545,1,1.69505e-06,1 GT:PL 0/1:48,0,220
Scaffold_1 687205 . G A 12.272 PASS DP=14;VDB=0.71601;SGB=-0.511536;RPB=0.0894312;MQB=0.040184;MQSB=0.547344;BQB=1;MQ0F=0.0714286;AF1=0.499984;AC1=1;DP4=5,5,0,3;MQ=55;FQ=15.1496;PV4=0.230769,1,4.64574e-07,0.32873 GT:PL 0/1:42,0,240
Scaffold_1 691369 . A G 10.42 PASS DP=20;VDB=0.112085;SGB=-0.556411;RPB=0.0454986;MQB=0.0144756;MQSB=0.624635;BQB=0.624635;MQ0F=0;AF1=0.499975;AC1=1;DP4=8,4,4,0;MQ=54;FQ=13.2265;PV4=0.516484,1,2.15685e-05,1 GT:PL 0/1:40,0,255
Scaffold_1 691405 . C T 14.176 PASS DP=21;VDB=0.681436;SGB=-0.511536;RPB=1;MQB=0.148002;MQSB=0.93223;BQB=0.998247;MQ0F=0.047619;AF1=0.49999;AC1=1;DP4=9,6,3,0;MQ=54;FQ=17.1004;PV4=0.514706,0.328672,0.231035,1 GT:PL 0/1:44,0,255
Scaffold_1 691410 . C T 37.0079 PASS DP=21;VDB=0.836469;SGB=-0.556411;RPB=0.843173;MQB=0.236074;MQSB=0.863325;BQB=0.998591;MQ0F=0.047619;AF1=0.5;AC1=1;DP4=9,5,4,0;MQ=51;FQ=40.0156;PV4=0.277778,0.316131,0.354027,1 GT:PL 0/1:67,0,254
Scaffold_1 691543 . T G 36.0081 PASS DP=17;VDB=0.868052;SGB=-0.511536;RPB=0.990991;MQB=0.216663;MQSB=0.635221;BQB=0.945009;MQ0F=0;AF1=0.5;AC1=1;DP4=5,8,2,1;MQ=59;FQ=39.0157;PV4=0.55,1,0.000509623,1 GT:PL 0/1:66,0,255
Scaffold_1 691549 . T G 20.0499 PASS DP=17;VDB=0.26;SGB=-0.453602;RPB=0.833333;MQB=0.5;MQSB=0.885987;BQB=0.25;MQ0F=0;AF1=0.499997;AC1=1;DP4=6,6,1,1;MQ=59;FQ=23.0366;PV4=1,1,0.00376607,1 GT:PL 0/1:50,0,251
Scaffold_1 691550 . G T 10.42 PASS DP=17;VDB=0.26;SGB=-0.453602;RPB=0.714286;MQB=0.5;MQSB=0.892753;BQB=0.678571;MQ0F=0;AF1=0.499975;AC1=1;DP4=6,8,1,1;MQ=59;FQ=13.2265;PV4=1,1,0.0017676,1 GT:PL 0/1:40,0,255
Scaffold_1 691553 . G A 16.1143 PASS DP=15;VDB=0.26;SGB=-0.453602;RPB=0.833333;MQB=0.5;MQSB=0.885987;BQB=0.625;MQ0F=0;AF1=0.499994;AC1=1;DP4=6,6,1,1;MQ=59;FQ=19.069;PV4=1,1,0.00376607,1 GT:PL 0/1:46,0,255
Scaffold_1 691568 . T A 26.0177 PASS DP=13;VDB=0.28;SGB=-0.453602;RPB=0.8;MQB=0.5;MQSB=0.896474;BQB=0.4;MQ0F=0;AF1=0.499999;AC1=1;DP4=6,4,1,1;MQ=59;FQ=29.0205;PV4=1,1,0.00809854,1 GT:PL 0/1:56,0,249
Scaffold_1 691664 . T A 28.0137 PASS DP=15;VDB=0.116687;SGB=-0.511536;RPB=0.846482;MQB=0.22313;MQSB=0.0686612;BQB=0.93697;MQ0F=0;AF1=0.5;AC1=1;DP4=8,4,0,3;MQ=52;FQ=31.0185;PV4=0.0769231,1,0.234405,1 GT:PL 0/1:58,0,222
Scaffold_1 691668 . T G 14.176 PASS DP=15;VDB=0.126715;SGB=-0.511536;RPB=0.846482;MQB=0.22313;MQSB=0.0686612;BQB=0.77073;MQ0F=0;AF1=0.49999;AC1=1;DP4=8,4,0,3;MQ=52;FQ=17.1004;PV4=0.0769231,0.0806381,0.234405,1 GT:PL 0/1:44,0,211
Scaffold_1 691681 . T G 30.0112 PASS DP=15;VDB=0.121629;SGB=-0.511536;RPB=0.846482;MQB=0.22313;MQSB=0.0686612;BQB=0.91051;MQ0F=0;AF1=0.5;AC1=1;DP4=8,4,0,3;MQ=52;FQ=33.0172;PV4=0.0769231,1,0.234405,1 GT:PL 0/1:60,0,220
Scaffold_1 691695 . C A 32.0097 PASS DP=13;VDB=0.121629;SGB=-0.511536;RPB=0.944459;MQB=0.314383;MQSB=0.112477;BQB=0.496585;MQ0F=0;AF1=0.5;AC1=1;DP4=6,4,0,3;MQ=51;FQ=35.0165;PV4=0.192308,0.0733249,0.295253,1 GT:PL 0/1:62,0,200
Scaffold_1 691699 . A G 41.0074 PASS DP=14;VDB=0.0218651;SGB=-0.590765;RPB=0.448332;MQB=0.011109;MQSB=0.0857407;BQB=0.800737;MQ0F=0;AF1=0.5;AC1=1;DP4=7,2,0,5;MQ=52;FQ=44.0154;PV4=0.020979,1,0.000115861,1 GT:PL 0/1:71,0,209
Scaffold_1 691705 . A T 37.0079 PASS DP=15;VDB=0.0207102;SGB=-0.590765;RPB=0.448332;MQB=0.011109;MQSB=0.0857407;BQB=1;MQ0F=0;AF1=0.5;AC1=1;DP4=7,2,0,5;MQ=52;FQ=40.0156;PV4=0.020979,1,0.000115861,1 GT:PL 0/1:67,0,211
Scaffold_1 691708 . T C 39.0076 PASS DP=15;VDB=0.0207102;SGB=-0.590765;RPB=0.339596;MQB=0.00920968;MQSB=0.128634;BQB=0.829029;MQ0F=0;AF1=0.5;AC1=1;DP4=7,3,0,5;MQ=52;FQ=42.0155;PV4=0.025641,1,5.24992e-05,1 GT:PL 0/1:69,0,225
Scaffold_1 691713 . C A 33.0091 PASS DP=14;VDB=0.116687;SGB=-0.511536;RPB=0.552148;MQB=0.2628;MQSB=0.153355;BQB=0.896649;MQ0F=0;AF1=0.5;AC1=1;DP4=6,5,0,3;MQ=52;FQ=36.0162;PV4=0.208791,1,0.262695,1 GT:PL 0/1:63,0,224
Scaffold_1 691719 . A C 41.0074 PASS DP=14;VDB=0.0201525;SGB=-0.590765;RPB=0.135335;MQB=0.011109;MQSB=0.153355;BQB=0.800737;MQ0F=0;AF1=0.5;AC1=1;DP4=6,3,0,5;MQ=52;FQ=44.0154;PV4=0.030969,1,0.000115861,1 GT:PL 0/1:71,0,225
Scaffold_1 691728 . G A 27.0155 PASS DP=14;VDB=0.116687;SGB=-0.511536;RPB=0.552148;MQB=0.2628;MQSB=0.153355;BQB=0.782349;MQ0F=0;AF1=0.499999;AC1=1;DP4=6,5,0,3;MQ=52;FQ=30.0194;PV4=0.208791,0.0580622,0.262695,0.306952 GT:PL 0/1:57,0,227
Scaffold_1 691970 . G T 13.2188 PASS DP=9;VDB=0.38;SGB=-0.453602;RPB=1;MQB=1;MQSB=1.01283;BQB=0;MQ0F=0;AF1=0.499987;AC1=1;DP4=1,4,2,0;MQ=60;FQ=16.1222;PV4=0.142857,0.0022111,1,1 GT:PL 0/1:43,0,149
Scaffold_1 691976 . G T 10.42 PASS DP=9;VDB=0.42;SGB=-0.453602;RPB=0.833333;MQB=1;MQSB=0.992367;BQB=0.666667;MQ0F=0;AF1=0.499975;AC1=1;DP4=2,4,2,0;MQ=60;FQ=13.2265;PV4=0.428571,0.0853308,1,1 GT:PL 0/1:40,0,174
Scaffold_1 707173 . G C 22.0341 PASS DP=12;VDB=0.14;SGB=-0.453602;RPB=0;MQB=0;MQSB=0.952347;BQB=0.875;MQ0F=0;AF1=0.499998;AC1=1;DP4=4,4,1,1;MQ=57;FQ=25.0286;PV4=1,0.322688,1.47683e-13,1 GT:PL 0/1:52,0,244
Scaffold_1 707177 . C G 22.0341 PASS DP=12;VDB=0.14;SGB=-0.453602;RPB=0;MQB=0;MQSB=0.952347;BQB=1;MQ0F=0;AF1=0.499998;AC1=1;DP4=4,4,1,1;MQ=57;FQ=25.0286;PV4=1,0.341508,1.47683e-13,1 GT:PL 0/1:52,0,241
Scaffold_1 707184 . A G 53.0072 PASS DP=12;VDB=0.275636;SGB=-0.511536;RPB=0.124514;MQB=0.0497871;MQSB=0.891517;BQB=0.954207;MQ0F=0;AF1=0.5;AC1=1;DP4=4,4,2,1;MQ=56;FQ=56.0154;PV4=1,0.448302,1.64874e-11,0.420253 GT:PL 0/1:83,0,228
Scaffold_1 707198 . C T 59.0073 PASS DP=11;VDB=0.267404;SGB=-0.511536;RPB=0.231146;MQB=0.115573;MQSB=0.924584;BQB=0.924584;MQ0F=0;AF1=0.5;AC1=1;DP4=4,2,2,1;MQ=55;FQ=62.0154;PV4=1,0.234989,3.96993e-09,1 GT:PL 0/1:89,0,200
Scaffold_1 707204 . G A 55.0072 PASS DP=11;VDB=0.267404;SGB=-0.511536;RPB=0.231146;MQB=0.115573;MQSB=0.924584;BQB=0.809011;MQ0F=0;AF1=0.5;AC1=1;DP4=4,2,2,1;MQ=55;FQ=58.0154;PV4=1,0.20001,3.96993e-09,1 GT:PL 0/1:85,0,200
Scaffold_1 707218 . C T 84.0076 PASS DP=10;VDB=0.472095;SGB=-0.556411;RPB=0.124046;MQB=0.124046;MQSB=0.750668;BQB=0.992367;MQ0F=0;AF1=0.5;AC1=1;DP4=2,2,3,1;MQ=51;FQ=87.0103;PV4=1,0.208728,0.000128599,1 GT:PL 0/1:114,0,143
Scaffold_1 707236 . G C 86.0076 PASS DP=8;VDB=0.472095;SGB=-0.556411;RPB=0.810265;MQB=0.202566;MQSB=0.202566;BQB=0.810265;MQ0F=0;AF1=0.5;AC1=1;DP4=0,3,3,1;MQ=49;FQ=54.014;PV4=0.142857,1,0.000652059,1 GT:PL 0/1:116,0,81
Scaffold_1 707248 . T C 84.0076 PASS DP=8;VDB=0.484771;SGB=-0.556411;RPB=0.810265;MQB=0.202566;MQSB=0.202566;BQB=0.810265;MQ0F=0;AF1=0.5;AC1=1;DP4=0,3,3,1;MQ=49;FQ=54.0132;PV4=0.142857,1,0.000652059,1 GT:PL 0/1:114,0,81
Scaffold_1 707259 . G T 78.0075 PASS DP=10;VDB=0.459448;SGB=-0.556411;RPB=0.559863;MQB=0.0559863;MQSB=0.279932;BQB=0.503877;MQ0F=0;AF1=0.5;AC1=1;DP4=1,5,3,1;MQ=53;FQ=81.0151;PV4=0.190476,1,5.3274e-06,1 GT:PL 0/1:108,0,147
Scaffold_1 707261 . A C 81.0075 PASS DP=10;VDB=0.472095;SGB=-0.556411;RPB=0.487298;MQB=0.0812164;MQSB=0.406082;BQB=0.649731;MQ0F=0;AF1=0.5;AC1=1;DP4=1,4,3,1;MQ=52;FQ=84.0071;PV4=0.206349,1,2.59801e-05,1 GT:PL 0/1:111,0,138
Scaffold_1 707285 . C T 15.1417 PASS DP=7;VDB=0.42;SGB=-0.453602;RPB=0.25;MQB=0;MQSB=0.28717;BQB=0.875;MQ0F=0;AF1=0.499992;AC1=1;DP4=1,3,2,0;MQ=53;FQ=18.0829;PV4=0.4,1,0.000442182,1 GT:PL 0/1:45,0,117
Scaffold_1 707287 . C T 16.1143 PASS DP=7;VDB=0.42;SGB=-0.453602;RPB=0.6;MQB=0;MQSB=0.405132;BQB=0.8;MQ0F=0;AF1=0.499994;AC1=1;DP4=1,4,2,0;MQ=54;FQ=19.069;PV4=0.142857,1,7.45456e-05,1 GT:PL 0/1:46,0,143
Scaffold_1 707289 . A G 16.1143 PASS DP=7;VDB=0.42;SGB=-0.453602;RPB=0.6;MQB=0;MQSB=0.405132;BQB=0.6;MQ0F=0;AF1=0.499994;AC1=1;DP4=1,4,2,0;MQ=54;FQ=19.069;PV4=0.142857,1,7.45456e-05,1 GT:PL 0/1:46,0,137
Scaffold_1 707516 . C T 10.42 PASS DP=8;VDB=0.56;SGB=-0.453602;RPB=0.666667;MQB=0;MQSB=0.62023;BQB=0.5;MQ0F=0;AF1=0.499975;AC1=1;DP4=4,2,0,2;MQ=55;FQ=13.2265;PV4=0.428571,0.0390704,9.2908e-05,1 GT:PL 0/1:40,0,179
Scaffold_1 707535 . T C 17.0924 PASS DP=7;VDB=0.56;SGB=-0.453602;RPB=0.8;MQB=0;MQSB=0.405132;BQB=0.8;MQ0F=0;AF1=0.499995;AC1=1;DP4=4,1,0,2;MQ=55;FQ=20.058;PV4=0.142857,1,0.000391265,1 GT:PL 0/1:47,0,142
Scaffold_1 707536 . A T 17.0924 PASS DP=7;VDB=0.56;SGB=-0.453602;RPB=0.8;MQB=0;MQSB=0.405132;BQB=0.8;MQ0F=0;AF1=0.499995;AC1=1;DP4=4,1,0,2;MQ=55;FQ=20.058;PV4=0.142857,1,0.000391265,1 GT:PL 0/1:47,0,145
Scaffold_1 707560 . A T 11.3381 PASS DP=10;VDB=0.56;SGB=-0.453602;RPB=0.285714;MQB=0;MQSB=0;BQB=0.714286;MQ0F=0;AF1=0.49998;AC1=1;DP4=7,0,0,2;MQ=56;FQ=14.1838;PV4=0.0277778,1,2.22046e-05,1 GT:PL 0/1:41,0,147
Scaffold_1 710341 . C A 10.42 PASS DP=13;VDB=0.02;SGB=-0.453602;RPB=1;MQB=1;MQSB=1;BQB=0.9;MQ0F=0;AF1=0.499975;AC1=1;DP4=2,8,2,0;MQ=60;FQ=13.2265;PV4=0.0909091,0.409288,1,1 GT:PL 0/1:40,0,242
Scaffold_1 714384 . T C 40.0075 PASS DP=21;VDB=0.489658;SGB=-0.616816;RPB=0.274345;MQB=0.00247875;MQSB=0.12198;BQB=0.986487;MQ0F=0;AF1=0.5;AC1=1;DP4=5,9,6,0;MQ=53;FQ=43.0154;PV4=0.0140867,0.209074,2.84571e-07,0.352404 GT:PL 0/1:70,0,255
Scaffold_1 714386 . G A 27.0155 PASS DP=21;VDB=0.0243383;SGB=-0.590765;RPB=0.061619;MQB=0.00524752;MQSB=0.184981;BQB=0.962163;MQ0F=0;AF1=0.499999;AC1=1;DP4=5,9,5,0;MQ=54;FQ=30.0194;PV4=0.0325077,1,1.56216e-06,0.276058 GT:PL 0/1:57,0,255
Scaffold_1 714420 . G A 44.0073 PASS DP=22;VDB=0.0411825;SGB=-0.616816;RPB=0.315918;MQB=0.00216277;MQSB=0.408591;BQB=1;MQ0F=0;AF1=0.5;AC1=1;DP4=6,9,5,1;MQ=53;FQ=47.0153;PV4=0.148607,0.130306,2.0516e-07,1 GT:PL 0/1:74,0,255
Scaffold_1 714482 . C T 125.008 PASS DP=37;VDB=0.750486;SGB=-0.683931;RPB=0.782687;MQB=1.04325e-05;MQSB=0.133186;BQB=0.998474;MQ0F=0;AF1=0.5;AC1=1;DP4=9,11,11,2;MQ=50;FQ=128.016;PV4=0.0324885,1,1.90149e-13,1 GT:PL 0/1:155,0,255
Scaffold_1 714483 . G A 125.008 PASS DP=37;VDB=0.759509;SGB=-0.683931;RPB=0.842857;MQB=8.29382e-06;MQSB=0.110352;BQB=0.696494;MQ0F=0;AF1=0.5;AC1=1;DP4=9,12,11,2;MQ=51;FQ=128.016;PV4=0.0302131,1,6.14883e-14,0.473561 GT:PL 0/1:155,0,255
Scaffold_1 714495 . A T 74.0075 PASS DP=33;VDB=0.0850605;SGB=-0.670168;RPB=0.985816;MQB=5.30779e-05;MQSB=0.202842;BQB=0.32458;MQ0F=0;AF1=0.5;AC1=1;DP4=9,12,8,2;MQ=52;FQ=77.0156;PV4=0.0679886,1,3.27945e-15,1 GT:PL 0/1:104,0,255
Scaffold_1 714496 . C T 76.0075 PASS DP=33;VDB=0.0830571;SGB=-0.670168;RPB=0.996136;MQB=6.26831e-05;MQSB=0.16068;BQB=0.49387;MQ0F=0;AF1=0.5;AC1=1;DP4=8,12,8,2;MQ=51;FQ=79.0156;PV4=0.0576712,1,1.17604e-14,1 GT:PL 0/1:106,0,255
Scaffold_1 714503 . C T 74.0075 PASS DP=34;VDB=0.083721;SGB=-0.670168;RPB=0.977926;MQB=5.30779e-05;MQSB=0.202842;BQB=0.496585;MQ0F=0;AF1=0.5;AC1=1;DP4=9,12,8,2;MQ=52;FQ=77.0156;PV4=0.0679886,1,3.27945e-15,1 GT:PL 0/1:104,0,255
Scaffold_1 714505 . G A 76.0075 PASS DP=33;VDB=0.283895;SGB=-0.680642;RPB=0.293258;MQB=0.00070447;MQSB=0.229422;BQB=0.507812;MQ0F=0;AF1=0.5;AC1=1;DP4=9,9,8,4;MQ=51;FQ=79.0156;PV4=0.465082,1,2.59446e-08,0.347854 GT:PL 0/1:106,0,255
Scaffold_1 714553 . C T 157.009 PASS DP=33;VDB=0.0591825;SGB=-0.680642;RPB=0.997986;MQB=0.00070447;MQSB=0.982731;BQB=1;MQ0F=0;AF1=0.5;AC1=1;DP4=10,8,5,7;MQ=52;FQ=160.017;PV4=0.710382,0.333906,4.94015e-09,1 GT:PL 0/1:187,0,255
Scaffold_1 714572 . T G 142.008 PASS DP=31;VDB=0.0413416;SGB=-0.670168;RPB=0.952597;MQB=0.00258347;MQSB=0.995787;BQB=0.487536;MQ0F=0;AF1=0.5;AC1=1;DP4=10,8,4,6;MQ=54;FQ=145.016;PV4=0.694584,1,7.51958e-08,1 GT:PL 0/1:172,0,255
Scaffold_1 714580 . T C 137.008 PASS DP=26;VDB=0.047706;SGB=-0.662043;RPB=0.260684;MQB=0.00744658;MQSB=1;BQB=0.40657;MQ0F=0;AF1=0.5;AC1=1;DP4=10,5,4,5;MQ=53;FQ=140.016;PV4=0.402847,0.41861,2.41141e-06,1 GT:PL 0/1:167,0,255
Scaffold_1 714581 . C T 137.008 PASS DP=26;VDB=0.0462669;SGB=-0.662043;RPB=0.260684;MQB=0.00744658;MQSB=1;BQB=0.273624;MQ0F=0;AF1=0.5;AC1=1;DP4=10,5,4,5;MQ=53;FQ=140.016;PV4=0.402847,0.480249,2.41141e-06,1 GT:PL 0/1:167,0,255
Scaffold_1 714583 . A G 131.008 PASS DP=27;VDB=0.047706;SGB=-0.662043;RPB=0.286951;MQB=0.00744658;MQSB=1;BQB=0.634377;MQ0F=0;AF1=0.5;AC1=1;DP4=10,5,4,5;MQ=53;FQ=134.016;PV4=0.402847,1,2.41141e-06,1 GT:PL 0/1:161,0,255
Scaffold_1 714627 . T C 32.0097 PASS DP=16;VDB=0.0349627;SGB=-0.511536;RPB=0.0694835;MQB=0.687289;MQSB=0.868815;BQB=0.556584;MQ0F=0;AF1=0.5;AC1=1;DP4=9,3,0,3;MQ=59;FQ=35.0165;PV4=0.043956,1,0.0200465,1 GT:PL 0/1:62,0,244
Scaffold_1 714642 . A C 32.0097 PASS DP=16;VDB=0.0349627;SGB=-0.511536;RPB=0.0694835;MQB=0.687289;MQSB=0.898397;BQB=0.809825;MQ0F=0;AF1=0.5;AC1=1;DP4=8,4,0,3;MQ=59;FQ=35.0165;PV4=0.0769231,1,0.0200465,0.000865086 GT:PL 0/1:62,0,255
Scaffold_1 714748 . G A 31.0104 PASS DP=18;VDB=0.387565;SGB=-0.590765;RPB=0.987578;MQB=0.00673795;MQSB=0.232624;BQB=0.951229;MQ0F=0;AF1=0.5;AC1=1;DP4=7,5,0,5;MQ=53;FQ=34.0168;PV4=0.0441176,1,2.91688e-13,1 GT:PL 0/1:61,0,255
Scaffold_1 714770 . A G 33.0091 PASS DP=16;VDB=0.37035;SGB=-0.590765;RPB=0.140122;MQB=0.00780539;MQSB=0.479364;BQB=0.793727;MQ0F=0;AF1=0.5;AC1=1;DP4=4,7,0,5;MQ=52;FQ=36.0162;PV4=0.244505,0.213673,2.12378e-12,1 GT:PL 0/1:63,0,255
Scaffold_1 721094 . G T 12.272 PASS DP=8;VDB=0.14;SGB=-0.453602;RPB=0.5;MQB=0.5;MQSB=1;BQB=0.25;MQ0F=0;AF1=0.499984;AC1=1;DP4=3,1,2,0;MQ=57;FQ=15.1496;PV4=1,0.0587338,0.0889039,1 GT:PL 0/1:42,0,120
Scaffold_1 722448 . A G 222 PASS DP=14;VDB=0.780064;SGB=-0.686358;MQSB=1;MQ0F=0;AF1=1;AC1=2;DP4=0,0,11,3;MQ=60;FQ=-68.9862 GT:PL 1/1:255,42,0
Scaffold_1 725359 . C T 110.264 PASS DP=6;VDB=0.797968;SGB=-0.590765;MQSB=1;MQ0F=0;AF1=1;AC1=2;DP4=0,0,4,1;MQ=60;FQ=-41.9862 GT:PL 1/1:143,15,0
Scaffold_1 741284 . C G 22.0341 PASS DP=9;VDB=0.18;SGB=-0.453602;RPB=0.333333;MQB=0.5;MQSB=0.833333;BQB=0.666667;MQ0F=0;AF1=0.499998;AC1=1;DP4=4,2,2,0;MQ=60;FQ=25.0286;PV4=1,1,0.0390704,0.103178 GT:PL 0/1:52,0,164
Scaffold_1 741303 . A G 66.0074 PASS DP=13;VDB=0.0395055;SGB=-0.556411;RPB=0.697274;MQB=0.397295;MQSB=0.6821;BQB=0.397295;MQ0F=0;AF1=0.5;AC1=1;DP4=3,5,4,0;MQ=59;FQ=69.0155;PV4=0.0808081,1,0.0258643,0.394913 GT:PL 0/1:96,0,185
Scaffold_1 741328 . A C 82.0076 PASS DP=14;VDB=0.0718299;SGB=-0.590765;RPB=0.606531;MQB=0.197899;MQSB=0.509156;BQB=0.606531;MQ0F=0;AF1=0.5;AC1=1;DP4=3,6,5,0;MQ=58;FQ=85.0157;PV4=0.030969,1,0.0347591,0.390719 GT:PL 0/1:112,0,219
Scaffold_1 741343 . A C 79.0075 PASS DP=15;VDB=0.0718299;SGB=-0.590765;RPB=0.998127;MQB=0.184981;MQSB=0.569783;BQB=0.954207;MQ0F=0;AF1=0.5;AC1=1;DP4=4,6,5,0;MQ=58;FQ=82.0157;PV4=0.043956,1,0.0272891,1 GT:PL 0/1:109,0,246
Scaffold_1 741411 . C T 75.0075 PASS DP=14;VDB=0.07183;SGB=-0.590765;RPB=0.380236;MQB=0.213769;MQSB=0.470358;BQB=1;MQ0F=0;AF1=0.5;AC1=1;DP4=2,6,5,0;MQ=58;FQ=78.0156;PV4=0.020979,0.341177,0.0443945,0.0892255 GT:PL 0/1:105,0,193
Scaffold_1 741440 . G T 23.0285 PASS DP=10;VDB=0.93184;SGB=-0.511536;RPB=0.809011;MQB=0.115573;MQSB=0.406082;BQB=0.346719;MQ0F=0.1;AF1=0.499999;AC1=1;DP4=2,4,3,0;MQ=54;FQ=26.0258;PV4=0.166667,1,0.0167934,1 GT:PL 0/1:53,0,146
Scaffold_1 741457 . A T 14.176 PASS DP=8;VDB=0.935046;SGB=-0.511536;RPB=0.900802;MQB=0.150134;MQSB=0.62023;BQB=0.900802;MQ0F=0.125;AF1=0.49999;AC1=1;DP4=2,3,2,1;MQ=51;FQ=17.1004;PV4=1,0.159206,0.00704356,1 GT:PL 0/1:44,0,147
Scaffold_1 741460 . T C 14.176 PASS DP=8;VDB=0.935046;SGB=-0.511536;RPB=0.900802;MQB=0.150134;MQSB=0.62023;BQB=0.750668;MQ0F=0.125;AF1=0.49999;AC1=1;DP4=2,3,2,1;MQ=51;FQ=17.1004;PV4=1,0.205873,0.00704356,1 GT:PL 0/1:44,0,146
Scaffold_1 741519 . A T 56.0072 PASS DP=8;VDB=0.484771;SGB=-0.556411;RPB=0.810265;MQB=0.202566;MQSB=0.810265;BQB=0.202566;MQ0F=0.25;AF1=0.5;AC1=1;DP4=2,1,1,3;MQ=49;FQ=56.8909;PV4=0.485714,1,0.0562158,1 GT:PL 0/1:86,0,88
Scaffold_1 741525 . G T 56.0072 PASS DP=8;VDB=0.484771;SGB=-0.556411;RPB=0.810265;MQB=0.202566;MQSB=0.810265;BQB=0.202566;MQ0F=0.25;AF1=0.5;AC1=1;DP4=2,1,1,3;MQ=49;FQ=52.0421;PV4=0.485714,1,0.0562158,1 GT:PL 0/1:86,0,80
Scaffold_1 741586 . A G 70.0074 PASS DP=12;VDB=0.284203;SGB=-0.616816;RPB=0.982603;MQB=0.0169414;MQSB=0.793923;BQB=0.372712;MQ0F=0.166667;AF1=0.5;AC1=1;DP4=3,3,1,5;MQ=49;FQ=73.0155;PV4=0.545455,1,0.0041027,1 GT:PL 0/1:100,0,149
Scaffold_1 741608 . A C 65.0073 PASS DP=14;VDB=0.293058;SGB=-0.616816;RPB=0.301194;MQB=0.00822975;MQSB=0.509156;BQB=0.509156;MQ0F=0.142857;AF1=0.5;AC1=1;DP4=5,3,1,5;MQ=51;FQ=68.0155;PV4=0.137529,1,0.00115894,1 GT:PL 0/1:95,0,199
Scaffold_1 741622 . A G 70.0074 PASS DP=12;VDB=0.311141;SGB=-0.616816;RPB=0.0169414;MQB=0.0169414;MQSB=0.793923;BQB=0.982603;MQ0F=0.166667;AF1=0.5;AC1=1;DP4=3,3,1,5;MQ=49;FQ=73.0156;PV4=0.545455,1,0.0041027,0.233878 GT:PL 0/1:100,0,175
Scaffold_1 741638 . G A 23.0285 PASS DP=10;VDB=0.077463;SGB=-0.556411;RPB=0.0559863;MQB=0.0559863;MQSB=0.895781;BQB=1.00775;MQ0F=0.2;AF1=0.499999;AC1=1;DP4=3,3,1,3;MQ=50;FQ=26.0258;PV4=0.571429,1,0.0011716,1 GT:PL 0/1:53,0,180
Scaffold_1 741649 . G A 14.176 PASS DP=11;VDB=0.0846253;SGB=-0.556411;RPB=0.0401934;MQB=0.0401934;MQSB=0.8618;BQB=0.964642;MQ0F=0.181818;AF1=0.49999;AC1=1;DP4=4,3,1,3;MQ=51;FQ=17.1004;PV4=0.545455,0.437184,0.000496222,1 GT:PL 0/1:44,0,193
Scaffold_1 741650 . C T 14.176 PASS DP=11;VDB=0.077463;SGB=-0.556411;RPB=0.0401934;MQB=0.0401934;MQSB=0.8618;BQB=0.924449;MQ0F=0.181818;AF1=0.49999;AC1=1;DP4=4,3,1,3;MQ=51;FQ=17.1004;PV4=0.545455,0.347638,0.000496222,1 GT:PL 0/1:44,0,196
Scaffold_1 741664 . A G 17.0924 PASS DP=10;VDB=0.0506481;SGB=-0.511536;RPB=0.0916482;MQB=0.0916482;MQSB=0.904729;BQB=0.916482;MQ0F=0.1;AF1=0.499995;AC1=1;DP4=4,3,1,2;MQ=53;FQ=20.058;PV4=1,0.272369,0.00153287,1 GT:PL 0/1:47,0,201
Scaffold_1 746537 . C T 38.0077 PASS DP=8;VDB=0.0349627;SGB=-0.511536;RPB=0.900802;MQB=0.900802;MQSB=0.750668;BQB=0.900802;MQ0F=0;AF1=0.5;AC1=1;DP4=2,3,3,0;MQ=52;FQ=41.0155;PV4=0.196429,1,1,1 GT:PL 0/1:68,0,127
Scaffold_1 746572 . G A 34.0087 PASS DP=11;VDB=0.0349627;SGB=-0.511536;RPB=0.472367;MQB=0.716531;MQSB=0.297172;BQB=0.954207;MQ0F=0;AF1=0.5;AC1=1;DP4=2,6,3,0;MQ=50;FQ=37.016;PV4=0.0606061,1,1,1 GT:PL 0/1:64,0,188
Scaffold_1 746600 . C T 20.0499 PASS DP=16;VDB=0.0349627;SGB=-0.511536;RPB=0.19218;MQB=0.979844;MQSB=0.507697;BQB=0.945009;MQ0F=0;AF1=0.499997;AC1=1;DP4=6,7,3,0;MQ=51;FQ=23.0366;PV4=0.2125,0.413895,1,1 GT:PL 0/1:50,0,255
Scaffold_1 746619 . G A 22.0341 PASS DP=15;VDB=0.0389723;SGB=-0.511536;RPB=0.1098;MQB=0.973096;MQSB=0.547669;BQB=0.334895;MQ0F=0;AF1=0.499998;AC1=1;DP4=5,6,3,0;MQ=52;FQ=25.0286;PV4=0.208791,0.0304646,1,1 GT:PL 0/1:52,0,255
Scaffold_1 746632 . C A 19.061 PASS DP=16;VDB=0.0389723;SGB=-0.511536;RPB=0.0342181;MQB=0.91051;MQSB=0.465043;BQB=0.556584;MQ0F=0;AF1=0.499997;AC1=1;DP4=6,6,3,0;MQ=53;FQ=22.0421;PV4=0.228571,0.118796,0.47698,1 GT:PL 0/1:49,0,255
Scaffold_1 749700 . T A 35.0083 PASS DP=9;VDB=0.02;SGB=-0.453602;RPB=0.25;MQB=0.5;MQSB=1;BQB=0;MQ0F=0;AF1=0.5;AC1=1;DP4=3,1,2,0;MQ=47;FQ=38.0158;PV4=1,1,0.330957,0.279209 GT:PL 0/1:65,0,120
Scaffold_1 749804 . G T 12.272 PASS DP=16;VDB=0.02;SGB=-0.453602;RPB=0;MQB=0;MQSB=0.896649;BQB=0;MQ0F=0;AF1=0.499984;AC1=1;DP4=9,3,2,0;MQ=58;FQ=15.1496;PV4=1,1,0,0.00617703 GT:PL 0/1:42,0,248
Scaffold_1 762368 . C A 16.1143 PASS DP=11;VDB=0.02;SGB=-0.453602;RPB=0.857143;MQB=1;MQSB=0.974597;BQB=1;MQ0F=0;AF1=0.499994;AC1=1;DP4=3,4,2,0;MQ=60;FQ=19.069;PV4=0.444444,1,1,1 GT:PL 0/1:46,0,182
Scaffold_1 774572 . C A 16.1143 PASS DP=11;VDB=0.02;SGB=-0.453602;RPB=1;MQB=1;MQSB=1;BQB=0.625;MQ0F=0;AF1=0.499994;AC1=1;DP4=1,7,0,2;MQ=60;FQ=19.069;PV4=1,1,1,1 GT:PL 0/1:46,0,180
Scaffold_1 776079 . G A 16.1143 PASS DP=7;VDB=0.48;SGB=-0.453602;RPB=1;MQB=1;MQSB=0.861511;BQB=0.75;MQ0F=0;AF1=0.499994;AC1=1;DP4=3,1,0,2;MQ=60;FQ=19.069;PV4=0.4,0.32891,1,1 GT:PL 0/1:46,0,112
Scaffold_1 782523 . C A 13.2188 PASS DP=13;VDB=0.02;SGB=-0.453602;RPB=0.666667;MQB=1;MQSB=0.964642;BQB=0.666667;MQ0F=0;AF1=0.499987;AC1=1;DP4=2,7,2,0;MQ=60;FQ=16.1222;PV4=0.109091,1,1,1 GT:PL 0/1:43,0,205
Scaffold_1 796245 . G C 11.3381 PASS DP=8;VDB=0.732596;SGB=-0.511536;RPB=0.600535;MQB=0.150134;MQSB=0.5;BQB=0.900802;MQ0F=0;AF1=0.49998;AC1=1;DP4=3,2,3,0;MQ=50;FQ=14.1838;PV4=0.464286,1,0.000471876,0.0636233 GT:PL 0/1:41,0,156
Scaffold_1 796271 . T C 13.2188 PASS DP=7;VDB=0.748679;SGB=-0.511536;RPB=0.810265;MQB=0.202566;MQSB=0.4;BQB=1.01283;MQ0F=0;AF1=0.499987;AC1=1;DP4=2,2,3,0;MQ=48;FQ=16.1222;PV4=0.428571,1,0.00165079,1 GT:PL 0/1:43,0,130
Scaffold_1 796280 . G A 11.3381 PASS DP=8;VDB=0.748679;SGB=-0.511536;RPB=0.900802;MQB=0.150134;MQSB=0.450401;BQB=0.900802;MQ0F=0;AF1=0.49998;AC1=1;DP4=2,3,3,0;MQ=50;FQ=14.1838;PV4=0.196429,0.45271,0.000471876,1 GT:PL 0/1:41,0,146
Scaffold_1 796343 . G T 11.3381 PASS DP=10;VDB=0.902899;SGB=-0.556411;RPB=0.730948;MQB=0.0812164;MQSB=0.487298;BQB=0.89338;MQ0F=0;AF1=0.49998;AC1=1;DP4=2,3,3,1;MQ=47;FQ=14.1838;PV4=0.52381,0.236945,0.00022268,1 GT:PL 0/1:41,0,147
Scaffold_1 796361 . C A 46.0072 PASS DP=10;VDB=0.925817;SGB=-0.590765;RPB=0.761877;MQB=0.0476173;MQSB=0.335918;BQB=0.523791;MQ0F=0;AF1=0.5;AC1=1;DP4=2,3,4,1;MQ=47;FQ=49.0153;PV4=0.52381,1,0.000468673,1 GT:PL 0/1:76,0,144
Scaffold_1 796371 . A G 51.0072 PASS DP=9;VDB=0.925817;SGB=-0.590765;RPB=0.900802;MQB=0.150134;MQSB=0.583333;BQB=0.900802;MQ0F=0;AF1=0.5;AC1=1;DP4=2,1,4,1;MQ=43;FQ=46.2252;PV4=1,1,0.00437971,0.133285 GT:PL 0/1:81,0,74
Scaffold_1 796373 . C G 51.0072 PASS DP=9;VDB=0.925817;SGB=-0.590765;RPB=0.900802;MQB=0.150134;MQSB=0.300267;BQB=0.900802;MQ0F=0;AF1=0.5;AC1=1;DP4=1,2,4,1;MQ=43;FQ=53.3764;PV4=0.464286,0.437685,0.00437971,0.133285 GT:PL 0/1:81,0,89
Scaffold_1 796386 . T G 22.0341 PASS DP=10;VDB=0.102722;SGB=-0.511536;RPB=0.916482;MQB=0.0916482;MQSB=0.895781;BQB=0.733186;MQ0F=0;AF1=0.499998;AC1=1;DP4=4,3,2,1;MQ=53;FQ=25.0286;PV4=1,1,0.00105247,1 GT:PL 0/1:52,0,184
Scaffold_1 796390 . A G 25.0205 PASS DP=10;VDB=0.102722;SGB=-0.511536;RPB=0.916482;MQB=0.0916482;MQSB=0.895781;BQB=0.641538;MQ0F=0;AF1=0.499999;AC1=1;DP4=4,3,2,1;MQ=53;FQ=28.0219;PV4=1,1,0.00105247,1 GT:PL 0/1:55,0,183
Scaffold_1 796404 . T C 25.0205 PASS DP=10;VDB=0.0941127;SGB=-0.511536;RPB=0.916482;MQB=0.0916482;MQSB=0.895781;BQB=0.366593;MQ0F=0;AF1=0.499999;AC1=1;DP4=4,3,2,1;MQ=53;FQ=28.0219;PV4=1,1,0.00105247,1 GT:PL 0/1:55,0,171
Scaffold_1 796457 . G C 22.0341 PASS DP=11;VDB=0.0983484;SGB=-0.511536;RPB=0.360295;MQB=0.0497871;MQSB=0.924449;BQB=0.655816;MQ0F=0;AF1=0.499998;AC1=1;DP4=5,3,2,1;MQ=54;FQ=25.0286;PV4=1,1,0.000470744,0.415231 GT:PL 0/1:52,0,198
Scaffold_1 796458 . A G 25.0205 PASS DP=11;VDB=0.102722;SGB=-0.511536;RPB=0.458241;MQB=0.0916482;MQSB=0.895781;BQB=0.916482;MQ0F=0;AF1=0.499999;AC1=1;DP4=4,3,2,1;MQ=53;FQ=28.0219;PV4=1,1,0.00105247,0.43665 GT:PL 0/1:55,0,185
Scaffold_1 796472 . T G 23.0285 PASS DP=9;VDB=0.14;SGB=-0.453602;RPB=0.285714;MQB=0;MQSB=0.924584;BQB=0.857143;MQ0F=0;AF1=0.499999;AC1=1;DP4=5,2,1,1;MQ=56;FQ=26.0258;PV4=1,1,0,0.160642 GT:PL 0/1:53,0,193
Scaffold_1 800582 . T A 17.0924 PASS DP=5;VDB=0.22;SGB=-0.453602;RPB=0;MQB=0.75;MQSB=1;BQB=0;MQ0F=0;AF1=0.499995;AC1=1;DP4=1,1,0,2;MQ=55;FQ=19.9241;PV4=1,0,0.372772,1 GT:PL 0/1:47,0,62
Scaffold_1 800637 . A T 92.5135 PASS DP=4;VDB=0.172317;SGB=-0.556411;MQ0F=0;AF1=1;AC1=2;DP4=0,0,0,4;MQ=54;FQ=-38.9864 GT:PL 1/1:125,12,0
Scaffold_1 800638 . T C 92.5135 PASS DP=4;VDB=0.172317;SGB=-0.556411;MQ0F=0;AF1=1;AC1=2;DP4=0,0,0,4;MQ=54;FQ=-38.9864 GT:PL 1/1:125,12,0
Scaffold_1 800639 . C A 92.5135 PASS DP=4;VDB=0.172317;SGB=-0.556411;MQ0F=0;AF1=1;AC1=2;DP4=0,0,0,4;MQ=54;FQ=-38.9864 GT:PL 1/1:125,12,0
Scaffold_1 804315 . T C 218.033 PASS DP=11;VDB=0.226103;SGB=-0.651104;MQSB=0.900802;MQ0F=0;AF1=1;AC1=2;DP4=0,0,3,5;MQ=58;FQ=-50.986 GT:PL 1/1:251,24,0
Scaffold_1 808073 . G T 22.0341 PASS DP=7;VDB=0.02;SGB=-0.453602;RPB=0;MQB=1;MQSB=1.01283;BQB=0.8;MQ0F=0;AF1=0.499998;AC1=1;DP4=3,2,0,2;MQ=60;FQ=25.0286;PV4=0.428571,0.476237,1,0.0994138 GT:PL 0/1:52,0,152
Scaffold_1 810584 . A G 13.2188 PASS DP=8;VDB=0.02;SGB=-0.453602;RPB=0;MQB=1;MQSB=1.01283;BQB=0;MQ0F=0;AF1=0.499987;AC1=1;DP4=3,2,0,2;MQ=60;FQ=16.1222;PV4=0.428571,0.167505,1,1 GT:PL 0/1:43,0,177
Scaffold_1 810990 . A G 21.0411 PASS DP=11;VDB=0.8;SGB=-0.453602;RPB=0.5;MQB=0;MQSB=0.733186;BQB=0.3125;MQ0F=0;AF1=0.499998;AC1=1;DP4=5,3,2,0;MQ=57;FQ=24.0321;PV4=1,1,8.37284e-08,1 GT:PL 0/1:51,0,199
Scaffold_1 810995 . T A 27.0155 PASS DP=11;VDB=0.8;SGB=-0.453602;RPB=0.5;MQB=0;MQSB=0.666667;BQB=0.333333;MQ0F=0;AF1=0.499999;AC1=1;DP4=4,2,2,0;MQ=56;FQ=30.0194;PV4=1,1,4.13988e-06,1 GT:PL 0/1:57,0,173
Scaffold_1 811061 . G A 21.0411 PASS DP=9;VDB=0.22;SGB=-0.453602;RPB=0.571429;MQB=0.5;MQSB=0.809011;BQB=0.857143;MQ0F=0;AF1=0.499998;AC1=1;DP4=5,2,1,1;MQ=58;FQ=24.0321;PV4=1,0.479828,0.0179047,1 GT:PL 0/1:51,0,188
Scaffold_1 811074 . G A 25.0205 PASS DP=9;VDB=0.22;SGB=-0.453602;RPB=0.285714;MQB=0.5;MQSB=0.809011;BQB=0.857143;MQ0F=0;AF1=0.499999;AC1=1;DP4=5,2,1,1;MQ=58;FQ=28.0219;PV4=1,1,0.0179047,1 GT:PL 0/1:55,0,190
Scaffold_1 812738 . A G 26.0177 PASS DP=18;VDB=0.0138351;SGB=-0.556411;RPB=0.0703402;MQB=0.913864;MQSB=0.913864;BQB=0.119433;MQ0F=0;AF1=0.499999;AC1=1;DP4=9,3,3,1;MQ=59;FQ=29.0205;PV4=1,0.0149883,1,0.00145852 GT:PL 0/1:56,0,237
Scaffold_1 814123 . G A 27.0155 PASS DP=7;VDB=0.14;SGB=-0.453602;RPB=0;MQB=0.5;MQSB=0.8;BQB=0.7;MQ0F=0;AF1=0.499999;AC1=1;DP4=1,4,1,1;MQ=58;FQ=30.0194;PV4=1,0.256655,0.0586934,0.0586934 GT:PL 0/1:57,0,146
Scaffold_1 814130 . C T 27.0155 PASS DP=8;VDB=0.14;SGB=-0.453602;RPB=0;MQB=0.5;MQSB=0.8;BQB=0.8;MQ0F=0;AF1=0.499999;AC1=1;DP4=1,4,1,1;MQ=58;FQ=30.0194;PV4=1,1,0.0586934,1 GT:PL 0/1:57,0,135
Scaffold_1 814147 . G A 24.0241 PASS DP=8;VDB=0.14;SGB=-0.453602;RPB=0.333333;MQB=0.5;MQSB=0.900802;BQB=1;MQ0F=0;AF1=0.499999;AC1=1;DP4=2,4,1,1;MQ=58;FQ=27.0236;PV4=1,1,0.0390704,1 GT:PL 0/1:54,0,160
Scaffold_1 814166 . C G 47.0072 PASS DP=10;VDB=0.18;SGB=-0.453602;RPB=0.666667;MQB=0.5;MQSB=0.900802;BQB=0.333333;MQ0F=0;AF1=0.5;AC1=1;DP4=2,4,1,1;MQ=58;FQ=50.0153;PV4=1,1,0.0390704,1 GT:PL 0/1:77,0,166
Scaffold_1 814184 . C T 37.0079 PASS DP=11;VDB=0.14;SGB=-0.453602;RPB=0.75;MQB=0.5;MQSB=0.783809;BQB=0.5625;MQ0F=0;AF1=0.5;AC1=1;DP4=5,3,1,1;MQ=59;FQ=40.0156;PV4=1,1,0.0176326,1 GT:PL 0/1:67,0,189
Scaffold_1 814189 . A G 41.0074 PASS DP=11;VDB=0.18;SGB=-0.453602;RPB=0.75;MQB=0.5;MQSB=0.783809;BQB=0.25;MQ0F=0;AF1=0.5;AC1=1;DP4=5,3,1,1;MQ=59;FQ=44.0154;PV4=1,1,0.0176326,1 GT:PL 0/1:71,0,193
Scaffold_1 814192 . G A 43.0073 PASS DP=10;VDB=0.18;SGB=-0.453602;RPB=0.333333;MQB=0.5;MQSB=0.750668;BQB=0.916667;MQ0F=0;AF1=0.5;AC1=1;DP4=4,2,1,1;MQ=58;FQ=46.0153;PV4=1,1,0.0390704,1 GT:PL 0/1:73,0,176
Scaffold_1 814208 . G A 50.0072 PASS DP=9;VDB=0.14;SGB=-0.453602;RPB=0;MQB=0.5;MQSB=0.5;BQB=0.4;MQ0F=0;AF1=0.5;AC1=1;DP4=4,1,1,1;MQ=58;FQ=53.0153;PV4=1,1,0.0586934,1 GT:PL 0/1:80,0,139
Scaffold_1 816801 . G A 22.0341 PASS DP=10;VDB=0.598038;SGB=-0.511536;RPB=0.916482;MQB=0.0916482;MQSB=1;BQB=0.916482;MQ0F=0;AF1=0.499998;AC1=1;DP4=6,1,3,0;MQ=53;FQ=25.0286;PV4=1,0.272369,0.000185961,1 GT:PL 0/1:52,0,175
Scaffold_1 816812 . A C 25.0205 PASS DP=10;VDB=0.578719;SGB=-0.511536;RPB=0.809011;MQB=0.115573;MQSB=0.571429;BQB=0.346719;MQ0F=0;AF1=0.499999;AC1=1;DP4=4,2,3,0;MQ=52;FQ=28.0219;PV4=0.5,1,0.000524414,1 GT:PL 0/1:55,0,155
Scaffold_1 817039 . G T 18.0749 PASS DP=13;VDB=0.142856;SGB=-0.511536;RPB=0.962269;MQB=0.0443614;MQSB=0.707404;BQB=0.933909;MQ0F=0;AF1=0.499996;AC1=1;DP4=3,6,0,3;MQ=56;FQ=21.0492;PV4=0.509091,0.267753,0.00252651,1 GT:PL 0/1:48,0,229
Scaffold_1 817052 . C T 12.272 PASS DP=14;VDB=0.142856;SGB=-0.511536;RPB=0.782349;MQB=0.0368832;MQSB=0.697676;BQB=0.896649;MQ0F=0;AF1=0.499984;AC1=1;DP4=4,7,0,3;MQ=56;FQ=15.1496;PV4=0.505495,1,0.000867569,1 GT:PL 0/1:42,0,254
Scaffold_1 820102 . A G 130.022 PASS DP=26;VDB=6.41155e-05;SGB=-0.670168;RPB=0.960789;MQB=0.612626;BQB=0.140858;MQ0F=0.153846;AF1=0.501582;AC1=1;DP4=4,0,10,0;MQ=32;FQ=-6.18227;PV4=1,1,1,0.451403 GT:PL 0/1:160,0,22
Scaffold_1 820169 . C T 28.0137 PASS DP=22;VDB=0.100421;SGB=-0.556411;RPB=0.0183156;MQB=0.884706;MQSB=1;BQB=0.852144;MQ0F=0.181818;AF1=0.5;AC1=1;DP4=9,1,4,0;MQ=30;FQ=31.0185;PV4=1,0.0789261,1,1 GT:PL 0/1:58,0,125
Scaffold_1 820183 . T C 27.0264 PASS DP=7;VDB=0.106137;SGB=-0.556411;RPB=0;MQB=0.5;BQB=0.125;MQ0F=0;AF1=0.501256;AC1=1;DP4=2,0,4,0;MQ=28;FQ=-5.44624;PV4=1,1,1,0.15625 GT:PL 0/1:57,0,23
Scaffold_1 820186 . C T 60.5131 PASS DP=5;VDB=0.106137;SGB=-0.556411;MQ0F=0;AF1=1;AC1=2;DP4=0,0,4,0;MQ=30;FQ=-38.9864 GT:PL 1/1:93,12,0
Scaffold_1 820191 . C T 24.0241 PASS DP=10;VDB=0.0846253;SGB=-0.556411;RPB=0.868321;MQB=0.992367;MQSB=0.750668;BQB=0.62023;MQ0F=0.1;AF1=0.5;AC1=1;DP4=1,3,4,0;MQ=24;FQ=24.4914;PV4=0.142857,1,1,1 GT:PL 0/1:54,0,55
Scaffold_1 820196 . C T 59.0754 PASS DP=10;VDB=0.41447;SGB=-0.616816;RPB=0.916667;MQB=1;MQSB=0.666667;BQB=0.666667;MQ0F=0.1;AF1=0.508032;AC1=1;DP4=1,1,5,1;MQ=25;FQ=-12.2521;PV4=0.464286,1,1,0.253718 GT:PL 0/1:89,0,15
Scaffold_1 820210 . C T 21.0411 PASS DP=12;VDB=0.0785113;SGB=-0.511536;RPB=0.450401;MQB=0.750668;MQSB=0.833333;BQB=0.900802;MQ0F=0.0833333;AF1=0.499998;AC1=1;DP4=3,2,3,0;MQ=25;FQ=23.978;PV4=0.464286,1,1,1 GT:PL 0/1:51,0,70
Scaffold_1 820250 . A G 10.42 PASS DP=80;VDB=0.000278099;SGB=-0.691153;RPB=0.0673647;MQB=0.223262;MQSB=0.95306;BQB=0.437505;MQ0F=0.3;AF1=0.499975;AC1=1;DP4=26,5,13,5;MQ=22;FQ=13.2265;PV4=0.46473,0.12237,0.0428902,0.23638 GT:PL 0/1:40,0,192
Scaffold_1 820277 . C A 93.0077 PASS DP=127;VDB=0.00537946;SGB=-0.693054;RPB=0.99751;MQB=0.985405;MQSB=0.994619;BQB=0.229859;MQ0F=0.299213;AF1=0.5;AC1=1;DP4=37,15,22,6;MQ=21;FQ=96.0158;PV4=0.597242,0.0250425,1,0.416976 GT:PL 0/1:123,0,171
Scaffold_1 820342 . A G 77.0075 PASS DP=117;VDB=0.0403538;SGB=-0.69312;RPB=0.375525;MQB=0.615407;MQSB=0.922133;BQB=0.010299;MQ0F=0.358974;AF1=0.5;AC1=1;DP4=20,15,20,12;MQ=19;FQ=80.0157;PV4=0.803684,0.000434031,0.177531,0.428556 GT:PL 0/1:107,0,185
Scaffold_1 820361 . A G 49.0072 PASS DP=74;VDB=0.00145312;SGB=-0.692067;RPB=0.428507;MQB=0.384162;MQSB=0.293262;BQB=0.830102;MQ0F=0.418919;AF1=0.5;AC1=1;DP4=19,10,10,10;MQ=18;FQ=48.4763;PV4=0.377276,1,1,1 GT:PL 0/1:79,0,78
Scaffold_1 820392 . A G 11.3381 PASS DP=44;VDB=0.0185018;SGB=-0.676189;RPB=0.0128164;MQB=0.562066;MQSB=0.611167;BQB=0.238671;MQ0F=0.272727;AF1=0.49998;AC1=1;DP4=10,10,4,7;MQ=20;FQ=14.1838;PV4=0.707381,0.0200861,0.175073,1 GT:PL 0/1:41,0,147
Scaffold_1 820561 . C T 13.2189 PASS DP=10;VDB=0.18;SGB=-0.453602;RPB=1;MQB=0.5;MQSB=1;BQB=0.875;MQ0F=0.2;AF1=0.500007;AC1=1;DP4=0,4,1,1;MQ=24;FQ=12.1627;PV4=0.333333,1,1,1 GT:PL 0/1:43,0,41
Scaffold_1 820986 . C A 90.0079 PASS DP=41;VDB=2.685e-12;SGB=-0.692352;RPB=0.597928;MQB=0.951017;MQSB=0.967531;BQB=0.914584;MQ0F=0.146341;AF1=0.500031;AC1=1;DP4=7,3,9,12;MQ=19;FQ=12.2797;PV4=0.252412,0.173178,1,0.466905 GT:PL 0/1:120,0,39
Scaffold_1 821027 . G A 134.008 PASS DP=298;VDB=2.7481e-15;SGB=-0.693146;RPB=0.866019;MQB=0.478383;MQSB=0.412744;BQB=0.98122;MQ0F=0.134228;AF1=0.5;AC1=1;DP4=87,44,33,9;MQ=32;FQ=137.016;PV4=0.178389,1,1,1 GT:PL 0/1:164,0,255
Scaffold_1 821028 . C G 181.009 PASS DP=302;VDB=1.10763e-24;SGB=-0.693147;RPB=0.832003;MQB=0.690647;MQSB=0.154649;BQB=0.0069692;MQ0F=0.135762;AF1=0.5;AC1=1;DP4=75,33,49,16;MQ=32;FQ=184.017;PV4=0.486601,0.00606109,1,1 GT:PL 0/1:211,0,255
Scaffold_1 821031 . A G 225.009 PASS DP=315;VDB=3.16144e-22;SGB=-0.693147;RPB=0.909704;MQB=0.716773;MQSB=0.105752;BQB=0.272615;MQ0F=0.136508;AF1=0.5;AC1=1;DP4=74,35,53,21;MQ=31;FQ=225.007;PV4=0.626939,0.0141118,1,1 GT:PL 0/1:255,0,255
Scaffold_1 821036 . T C 148.008 PASS DP=339;VDB=1.47695e-15;SGB=-0.693146;RPB=0.872763;MQB=0.0422173;MQSB=0.412888;BQB=0.772574;MQ0F=0.141593;AF1=0.5;AC1=1;DP4=101,41,31,12;MQ=31;FQ=151.017;PV4=1,0.240589,1,1 GT:PL 0/1:178,0,255
Scaffold_1 821040 . A T 225.009 PASS DP=352;VDB=7.79986e-21;SGB=-0.693147;RPB=0.857415;MQB=0.954279;MQSB=0.0386972;BQB=0.0309543;MQ0F=0.153409;AF1=0.5;AC1=1;DP4=64,28,76,21;MQ=30;FQ=225.007;PV4=0.186702,0.000280452,1,1 GT:PL 0/1:255,0,255
Scaffold_1 821051 . T C 221.009 PASS DP=379;VDB=1.22466e-18;SGB=-0.693147;RPB=0.601841;MQB=0.264415;MQSB=0.608011;BQB=0.796878;MQ0F=0.153034;AF1=0.5;AC1=1;DP4=104,44,45,18;MQ=31;FQ=222.562;PV4=1,0.341022,1,1 GT:PL 0/1:251,0,255
Scaffold_1 821053 . C T 225.009 PASS DP=381;VDB=3.03033e-31;SGB=-0.693147;RPB=0.679218;MQB=0.988838;MQSB=0.044607;BQB=0.00397538;MQ0F=0.152231;AF1=0.5;AC1=1;DP4=77,28,70,34;MQ=30;FQ=225.007;PV4=0.366331,0.000169501,0.442161,1 GT:PL 0/1:255,0,255
Scaffold_1 821054 . A C 225.009 PASS DP=387;VDB=2.87988e-18;SGB=-0.693147;RPB=0.831359;MQB=0.147291;MQSB=0.704199;BQB=0.000648277;MQ0F=0.155039;AF1=0.5;AC1=1;DP4=101,40,54,19;MQ=31;FQ=225.007;PV4=0.749585,5.87294e-06,1,1 GT:PL 0/1:255,0,255
Scaffold_1 821060 . A C 225.009 PASS DP=400;VDB=2.21136e-15;SGB=-0.693147;RPB=0.294011;MQB=0.997689;MQSB=0.327702;BQB=0.194421;MQ0F=0.16;AF1=0.5;AC1=1;DP4=99,40,58,25;MQ=30;FQ=225.007;PV4=0.879286,1,0.481251,1 GT:PL 0/1:255,0,255
Scaffold_1 821068 . G A 221.999 PASS DP=416;VDB=5.37414e-37;SGB=-0.693147;RPB=0.868104;MQB=0.796644;MQSB=0.534641;BQB=8.07906e-05;MQ0F=0.163462;AF1=1;AC1=2;DP4=13,15,148,54;MQ=30;FQ=-189.988;PV4=0.00710627,1,0.241519,1 GT:PL 1/1:255,163,0
Scaffold_1 821164 . T C 201.107 PASS DP=67;VDB=4.18439e-06;SGB=-0.693146;RPB=0.961669;MQB=0.986028;MQSB=0.922289;BQB=0.887187;MQ0F=0.179104;AF1=1;AC1=2;DP4=2,5,13,30;MQ=24;FQ=-45.986;PV4=1,1,1,1 GT:PL 1/1:234,19,0
Scaffold_1 821173 . A C 165 PASS DP=52;VDB=7.50456e-05;SGB=-0.693132;RPB=0.373646;MQB=0.992955;MQSB=0.789955;BQB=0.966359;MQ0F=0.173077;AF1=1;AC1=2;DP4=0,4,9,25;MQ=22;FQ=-64.9862;PV4=0.554481,1,1,1 GT:PL 1/1:198,38,0
Scaffold_1 821181 . G A 159.998 PASS DP=37;VDB=2.01343e-05;SGB=-0.693097;MQSB=0.599334;MQ0F=0.216216;AF1=1;AC1=2;DP4=0,0,10,20;MQ=20;FQ=-116.987 GT:PL 1/1:193,90,0
Scaffold_1 821208 . C A 22.0669 PASS DP=20;VDB=8.92934e-07;SGB=-0.686358;RPB=0.0301974;MQB=0.416862;MQSB=0.541994;BQB=0.820031;MQ0F=0.35;AF1=1;AC1=2;DP4=2,1,3,11;MQ=10;FQ=-49.986;PV4=0.191176,1,1,1 GT:PL 1/1:55,23,0
Scaffold_1 821551 . T C 63.0078 PASS DP=27;VDB=0.0158634;SGB=-0.651104;RPB=0.0135864;MQB=0.513192;MQSB=0.85394;BQB=0.34141;MQ0F=0.259259;AF1=0.50005;AC1=1;DP4=9,1,3,5;MQ=20;FQ=10.4274;PV4=0.0429864,0.0660851,1,1 GT:PL 0/1:93,0,37
Scaffold_1 821598 . A T 22.0341 PASS DP=56;VDB=2.80255e-05;SGB=-0.686358;RPB=0.0614788;MQB=0.847353;MQSB=0.999763;BQB=0.875342;MQ0F=0.178571;AF1=0.499998;AC1=1;DP4=11,6,11,3;MQ=23;FQ=25.0286;PV4=0.456403,1,0.492614,1 GT:PL 0/1:52,0,134
Scaffold_1 821620 . C T 32.0097 PASS DP=53;VDB=0.000245069;SGB=-0.662043;RPB=0.579578;MQB=0.658617;MQSB=0.909649;BQB=0.723178;MQ0F=0.207547;AF1=0.5;AC1=1;DP4=16,6,6,3;MQ=22;FQ=35.0165;PV4=1,0.165462,1,1 GT:PL 0/1:62,0,138
Scaffold_1 822423 . C T 83.0076 PASS DP=27;VDB=0.00107728;SGB=-0.616816;RPB=0.695312;MQB=0.112477;MQSB=1;BQB=0.961166;MQ0F=0.148148;AF1=0.5;AC1=1;DP4=6,1,6,0;MQ=30;FQ=38.0157;PV4=1,0.373595,1,1 GT:PL 0/1:113,0,65
Scaffold_1 822442 . A C 10.42 PASS DP=64;VDB=0.0649539;SGB=-0.511536;RPB=0.965874;MQB=0.0407622;MQSB=0.2628;BQB=0.286505;MQ0F=0.09375;AF1=0.499975;AC1=1;DP4=30,6,3,0;MQ=35;FQ=13.2265;PV4=1,1,1,0.497977 GT:PL 0/1:40,0,243
Scaffold_1 822462 . A C 83.0076 PASS DP=111;VDB=8.11476e-05;SGB=-0.680642;RPB=0.143704;MQB=0.659146;MQSB=0.738548;BQB=0.00949507;MQ0F=0.0630631;AF1=0.5;AC1=1;DP4=45,8,9,3;MQ=42;FQ=86.0157;PV4=0.411804,0.000227942,1,0.212685 GT:PL 0/1:113,0,255
Scaffold_1 822501 . A G 225.009 PASS DP=128;VDB=2.12107e-09;SGB=-0.693147;RPB=0.860111;MQB=0.0335318;MQSB=0.176523;BQB=0.932691;MQ0F=0.078125;AF1=0.5;AC1=1;DP4=10,3,46,13;MQ=41;FQ=184.017;PV4=1,0.334483,0.00628023,1 GT:PL 0/1:255,0,211
Scaffold_1 822508 . C T 170.009 PASS DP=124;VDB=0.000109339;SGB=-0.689466;RPB=0.194978;MQB=0.475671;MQSB=0.023247;BQB=0.633858;MQ0F=0.0483871;AF1=0.5;AC1=1;DP4=44,12,12,4;MQ=41;FQ=173.017;PV4=0.742888,0.115055,1,1 GT:PL 0/1:200,0,255
Scaffold_1 822558 . C T 62.0073 PASS DP=86;VDB=0.021643;SGB=-0.670168;RPB=0.975385;MQB=0.999923;MQSB=0.0664004;BQB=0.108275;MQ0F=0.0465116;AF1=0.5;AC1=1;DP4=25,14,5,5;MQ=39;FQ=65.0155;PV4=0.479891,0.0205962,0.49571,1 GT:PL 0/1:92,0,255
Scaffold_1 822567 . A G 225.01 PASS DP=75;VDB=6.1841e-08;SGB=-0.693136;RPB=0.55811;MQB=0.777896;MQSB=0.0207996;BQB=0.478016;MQ0F=0.0533333;AF1=0.500031;AC1=1;DP4=2,5,22,13;MQ=37;FQ=12.2797;PV4=0.118178,1,1,1 GT:PL 0/1:255,0,39
Scaffold_1 822573 . T A 16.1143 PASS DP=63;VDB=0.200927;SGB=-0.616816;RPB=0.899452;MQB=0.545545;MQSB=0.0240973;BQB=0.462998;MQ0F=0.0634921;AF1=0.499994;AC1=1;DP4=17,15,2,4;MQ=38;FQ=19.069;PV4=0.659881,0.111801,1,1 GT:PL 0/1:46,0,255
Scaffold_1 822611 . A G 20.1036 PASS DP=12;VDB=0.0126037;SGB=-0.636426;RPB=0.924449;MQB=0.803868;BQB=0.964642;MQ0F=0.25;AF1=0.506357;AC1=1;DP4=0,4,0,7;MQ=18;FQ=-11.3201;PV4=1,1,1,1 GT:PL 0/1:50,0,16
Scaffold_1 934798 . G A 53.2633 PASS DP=5;VDB=0.125998;SGB=-0.590765;MQSB=0.666667;MQ0F=0.2;AF1=1;AC1=2;DP4=0,0,3,2;MQ=23;FQ=-41.9862 GT:PL 1/1:86,15,0
Scaffold_1 934900 . C T 11.1139 PASS DP=3;VDB=0.02;SGB=-0.453602;MQ0F=0;AF1=1;AC1=2;DP4=0,0,0,2;MQ=24;FQ=-32.9882 GT:PL 1/1:42,6,0
Scaffold_1 935699 . A G 18.0749 PASS DP=57;VDB=0.0051748;SGB=-0.689466;RPB=0.052518;MQB=0.366099;MQSB=0.11931;BQB=0.962103;MQ0F=0.596491;AF1=0.499996;AC1=1;DP4=8,31,3,13;MQ=17;FQ=21.049;PV4=1,0.424756,1,1 GT:PL 0/1:48,0,93
Scaffold_1 939163 . C T 27.0155 PASS DP=15;VDB=0.160333;SGB=-0.511536;RPB=0.2628;MQB=1;MQSB=1;BQB=0.973096;MQ0F=0;AF1=0.499999;AC1=1;DP4=5,6,3,0;MQ=60;FQ=30.0194;PV4=0.208791,0.327731,1,0.285801 GT:PL 0/1:57,0,255
Scaffold_1 939179 . A T 61.0073 PASS DP=14;VDB=0.131345;SGB=-0.556411;RPB=0.367879;MQB=1;MQSB=1;BQB=0.852144;MQ0F=0;AF1=0.5;AC1=1;DP4=5,5,4,0;MQ=60;FQ=64.0155;PV4=0.220779,1,1,0.408148 GT:PL 0/1:91,0,245
Scaffold_1 939229 . G C 41.0074 PASS DP=15;VDB=0.154358;SGB=-0.511536;RPB=0.898672;MQB=1;MQSB=1;BQB=0.857404;MQ0F=0;AF1=0.5;AC1=1;DP4=7,2,3,0;MQ=60;FQ=44.0154;PV4=1,1,1,1 GT:PL 0/1:71,0,206
Scaffold_1 939233 . A G 52.0072 PASS DP=14;VDB=0.131345;SGB=-0.556411;RPB=0.898397;MQB=1;MQSB=1;BQB=0.697593;MQ0F=0;AF1=0.5;AC1=1;DP4=6,3,4,0;MQ=60;FQ=55.0154;PV4=0.496504,0.134156,1,1 GT:PL 0/1:82,0,223
Scaffold_1 939240 . A C 55.0072 PASS DP=13;VDB=0.138245;SGB=-0.556411;RPB=0.746718;MQB=1;MQSB=1;BQB=0.793923;MQ0F=0;AF1=0.5;AC1=1;DP4=5,3,4,0;MQ=60;FQ=58.0154;PV4=0.490909,0.259613,1,1 GT:PL 0/1:85,0,206
Scaffold_1 939421 . G A 49.0072 PASS DP=14;VDB=0.397076;SGB=-0.556411;RPB=0.527292;MQB=0.367879;MQSB=0.884706;BQB=0.997503;MQ0F=0;AF1=0.5;AC1=1;DP4=3,7,1,3;MQ=57;FQ=52.0153;PV4=1,0.327675,0.0236165,1 GT:PL 0/1:79,0,233
Scaffold_1 939445 . T G 54.0072 PASS DP=12;VDB=0.409395;SGB=-0.556411;RPB=1;MQB=0.397295;MQSB=0.55;BQB=0.996401;MQ0F=0;AF1=0.5;AC1=1;DP4=1,7,1,3;MQ=57;FQ=57.0154;PV4=1,0.227771,0.0399053,1 GT:PL 0/1:84,0,182
Scaffold_1 939452 . C A 48.0072 PASS DP=13;VDB=0.409395;SGB=-0.556411;RPB=1;MQB=0.397295;MQSB=0.55;BQB=0.793923;MQ0F=0;AF1=0.5;AC1=1;DP4=1,7,1,3;MQ=57;FQ=51.0153;PV4=1,0.236971,0.0399053,1 GT:PL 0/1:78,0,173
Scaffold_1 939466 . G T 80.0075 PASS DP=13;VDB=0.858927;SGB=-0.556411;RPB=0.763675;MQB=0.442128;MQSB=0.611111;BQB=0.643095;MQ0F=0;AF1=0.5;AC1=1;DP4=1,6,1,3;MQ=58;FQ=83.0157;PV4=1,0.202465,0.0201735,0.108681 GT:PL 0/1:110,0,193
Scaffold_1 939533 . G T 23.0285 PASS DP=11;VDB=0.37344;SGB=-0.511536;RPB=0.231146;MQB=0.346719;MQSB=0.346719;BQB=0.809011;MQ0F=0;AF1=0.499999;AC1=1;DP4=1,5,2,1;MQ=56;FQ=26.0258;PV4=0.22619,0.23473,0.0373338,0.142392 GT:PL 0/1:53,0,153
Scaffold_1 939559 . G A 11.3381 PASS DP=13;VDB=0.14;SGB=-0.453602;RPB=1;MQB=1;MQSB=1;BQB=0.75;MQ0F=0;AF1=0.49998;AC1=1;DP4=1,3,0,2;MQ=60;FQ=14.1838;PV4=1,0.286223,1,1 GT:PL 0/1:41,0,125
Scaffold_1 939564 . G A 15.1417 PASS DP=13;VDB=0.1;SGB=-0.453602;RPB=0.666667;MQB=1;MQSB=1;BQB=0.666667;MQ0F=0;AF1=0.499992;AC1=1;DP4=1,2,0,2;MQ=60;FQ=18.0829;PV4=1,0.2559,1,1 GT:PL 0/1:45,0,104
Scaffold_1 939600 . A G 18.0749 PASS DP=12;VDB=0.172729;SGB=-0.511536;RPB=0.0803926;MQB=0.0497871;MQSB=1;BQB=0.655816;MQ0F=0;AF1=0.499996;AC1=1;DP4=1,7,0,3;MQ=54;FQ=21.0492;PV4=1,1,0.000618355,1 GT:PL 0/1:48,0,158
Scaffold_1 939617 . T C 31.0104 PASS DP=11;VDB=0.401962;SGB=-0.511536;RPB=0.150134;MQB=0.450401;MQSB=1;BQB=0.600535;MQ0F=0;AF1=0.5;AC1=1;DP4=0,5,1,2;MQ=54;FQ=34.0168;PV4=0.375,1,0.0399646,0.466817 GT:PL 0/1:61,0,121
Scaffold_1 939639 . C T 102.008 PASS DP=13;VDB=0.348672;SGB=-0.616816;RPB=0.304946;MQB=0.186356;MQSB=0.838046;BQB=0.660716;MQ0F=0;AF1=0.5;AC1=1;DP4=1,5,3,3;MQ=54;FQ=105.005;PV4=0.545455,0.110196,0.0469953,1 GT:PL 0/1:132,0,158
Scaffold_1 939696 . A G 119.008 PASS DP=9;VDB=0.148314;SGB=-0.590765;RPB=0.730948;MQB=0.89338;MQSB=0.809011;BQB=0.0812164;MQ0F=0;AF1=0.5;AC1=1;DP4=3,1,3,2;MQ=54;FQ=57.0154;PV4=1,1,0.347212,1 GT:PL 0/1:149,0,84
Scaffold_1 939712 . C T 112.008 PASS DP=8;VDB=0.13561;SGB=-0.590765;RPB=0.300267;MQB=0.900802;MQSB=0.333333;BQB=0.300267;MQ0F=0;AF1=0.5;AC1=1;DP4=3,0,3,2;MQ=53;FQ=52.0153;PV4=0.464286,0.0120041,0.449827,0.240809 GT:PL 0/1:142,0,79
Scaffold_1 939737 . G A 39.765 PASS DP=6;VDB=0.02;SGB=-0.453602;MQ0F=0;AF1=1;AC1=2;DP4=0,0,2,0;MQ=59;FQ=-32.988 GT:PL 1/1:71,6,0
Scaffold_1 940243 . T G 43.0073 PASS DP=11;VDB=0.0618664;SGB=-0.511536;RPB=0.115573;MQB=0.115573;MQSB=0.642857;BQB=0.924584;MQ0F=0;AF1=0.5;AC1=1;DP4=1,5,1,2;MQ=55;FQ=46.0153;PV4=1,0.385308,3.96993e-09,1 GT:PL 0/1:73,0,141
Scaffold_1 940251 . T G 89.0077 PASS DP=11;VDB=0.0169029;SGB=-0.556411;RPB=0.0812164;MQB=0.0812164;MQSB=1;BQB=0.406082;MQ0F=0;AF1=0.5;AC1=1;DP4=0,5,1,3;MQ=53;FQ=68.9938;PV4=0.444444,1,3.02057e-09,1 GT:PL 0/1:119,0,96
Scaffold_1 940269 . A T 52.0072 PASS DP=9;VDB=0.0132829;SGB=-0.556411;RPB=0.0812164;MQB=0.0812164;MQSB=1;BQB=0.487298;MQ0F=0;AF1=0.5;AC1=1;DP4=0,5,1,3;MQ=53;FQ=55.0099;PV4=0.444444,0.0563463,3.02057e-09,1 GT:PL 0/1:82,0,111
Scaffold_1 940275 . G A 39.0076 PASS DP=6;VDB=0.14;SGB=-0.453602;RPB=0;MQB=0;MQSB=1;BQB=1;MQ0F=0;AF1=0.5;AC1=1;DP4=0,2,1,1;MQ=52;FQ=35.0432;PV4=1,1,0.00325501,1 GT:PL 0/1:69,0,63
Scaffold_1 940287 . G A 17.0924 PASS DP=7;VDB=0.1;SGB=-0.453602;RPB=0;MQB=0;MQSB=1;BQB=0;MQ0F=0;AF1=0.499995;AC1=1;DP4=0,2,1,1;MQ=51;FQ=19.9513;PV4=1,0.132458,0.00137931,1 GT:PL 0/1:47,0,63
Scaffold_1 940290 . T C 97.0078 PASS DP=7;VDB=0.0103531;SGB=-0.556411;RPB=0;MQB=0;MQSB=1;BQB=1;MQ0F=0;AF1=0.5;AC1=1;DP4=0,2,1,3;MQ=49;FQ=31.0185;PV4=1,1,2.10745e-05,1 GT:PL 0/1:127,0,58
Scaffold_1 940300 . C A 80.0075 PASS DP=7;VDB=0.00872848;SGB=-0.556411;RPB=0.810265;MQB=0.202566;MQSB=1;BQB=0.405132;MQ0F=0;AF1=0.5;AC1=1;DP4=0,3,1,3;MQ=50;FQ=57.0045;PV4=1,0.0543922,1.05281e-06,1 GT:PL 0/1:110,0,84
Scaffold_1 940301 . C A 69.0074 PASS DP=7;VDB=0.00800342;SGB=-0.556411;RPB=0.810265;MQB=0.202566;MQSB=1;BQB=0.810265;MQ0F=0;AF1=0.5;AC1=1;DP4=0,3,1,3;MQ=50;FQ=44.0085;PV4=1,0.411475,1.05281e-06,1 GT:PL 0/1:99,0,71
Scaffold_1 940305 . G A 72.0074 PASS DP=7;VDB=0.00800342;SGB=-0.556411;RPB=0.810265;MQB=0.202566;MQSB=1;BQB=0.810265;MQ0F=0;AF1=0.5;AC1=1;DP4=0,3,1,3;MQ=50;FQ=50.9981;PV4=1,0.246098,1.05281e-06,1 GT:PL 0/1:102,0,78
Scaffold_1 940334 . C T 99.0132 PASS DP=6;VDB=0.00701511;SGB=-0.556411;RPB=1;MQB=1;MQSB=1;BQB=1;MQ0F=0;AF1=0.500629;AC1=1;DP4=0,1,1,3;MQ=46;FQ=-3.53091;PV4=1,1,0.000494495,0.176694 GT:PL 0/1:129,0,26
Scaffold_1 940624 . C T 19.061 PASS DP=14;VDB=0.588406;SGB=-0.511536;RPB=0.983051;MQB=0.0443614;BQB=0.995736;MQ0F=0;AF1=0.499997;AC1=1;DP4=9,0,3,0;MQ=55;FQ=22.0421;PV4=1,1,8.08709e-06,1 GT:PL 0/1:49,0,184
Scaffold_1 940635 . C T 17.0924 PASS DP=15;VDB=0.588406;SGB=-0.511536;RPB=0.994805;MQB=0.0497871;BQB=0.994805;MQ0F=0;AF1=0.499995;AC1=1;DP4=8,0,3,0;MQ=54;FQ=20.058;PV4=1,0.455443,2.52409e-05,1 GT:PL 0/1:47,0,186
Scaffold_1 940677 . A G 29.0123 PASS DP=9;VDB=0.732596;SGB=-0.511536;RPB=0.300267;MQB=0.150134;MQSB=0.666667;BQB=0.900802;MQ0F=0;AF1=0.5;AC1=1;DP4=4,1,2,1;MQ=52;FQ=32.0178;PV4=1,0.240809,0.00348109,0.414485 GT:PL 0/1:59,0,164
Scaffold_1 940685 . G A 29.0123 PASS DP=9;VDB=0.756524;SGB=-0.511536;RPB=0.900802;MQB=0.150134;MQSB=0.666667;BQB=0.900802;MQ0F=0;AF1=0.5;AC1=1;DP4=4,1,2,1;MQ=52;FQ=32.0178;PV4=1,0.2675,0.00348109,1 GT:PL 0/1:59,0,162
Scaffold_1 940686 . G T 29.0123 PASS DP=9;VDB=0.756524;SGB=-0.511536;RPB=0.900802;MQB=0.150134;MQSB=0.666667;BQB=0.900802;MQ0F=0;AF1=0.5;AC1=1;DP4=4,1,2,1;MQ=52;FQ=32.0178;PV4=1,0.275339,0.00348109,1 GT:PL 0/1:59,0,162
Scaffold_1 940720 . T A 11.3381 PASS DP=8;VDB=0.78;SGB=-0.453602;RPB=0.75;MQB=0;BQB=0.5;MQ0F=0;AF1=0.49998;AC1=1;DP4=4,0,2,0;MQ=54;FQ=14.1838;PV4=1,0.15898,0,1 GT:PL 0/1:41,0,127
Scaffold_1 940721 . T C 23.0285 PASS DP=8;VDB=0.78;SGB=-0.453602;RPB=0.75;MQB=0;BQB=0.75;MQ0F=0;AF1=0.499999;AC1=1;DP4=4,0,2,0;MQ=54;FQ=26.0258;PV4=1,0.294955,0,1 GT:PL 0/1:53,0,124
Scaffold_1 940729 . C G 63.0073 PASS DP=8;VDB=0.78654;SGB=-0.511536;RPB=0.607698;MQB=0.202566;MQSB=1;BQB=1.01283;MQ0F=0;AF1=0.5;AC1=1;DP4=4,0,2,1;MQ=52;FQ=65.9938;PV4=0.428571,0.379371,0,1 GT:PL 0/1:93,0,116
Scaffold_1 940738 . G C 13.2188 PASS DP=8;VDB=0.78;SGB=-0.453602;RPB=0.75;MQB=0;MQSB=1;BQB=0.5;MQ0F=0;AF1=0.499987;AC1=1;DP4=3,1,2,0;MQ=54;FQ=16.1222;PV4=1,0.176383,0,1 GT:PL 0/1:43,0,138
Scaffold_1 940764 . A G 26.0177 PASS DP=8;VDB=0.1;SGB=-0.453602;RPB=0.333333;MQB=0;MQSB=0.900802;BQB=0.666667;MQ0F=0;AF1=0.499999;AC1=1;DP4=2,4,1,1;MQ=56;FQ=29.0205;PV4=1,1,0,1 GT:PL 0/1:56,0,173
Scaffold_1 940889 . A G 18.0749 PASS DP=14;VDB=0.724364;SGB=-0.511536;RPB=0.150478;MQB=0.0368832;MQSB=0.927743;BQB=0.952672;MQ0F=0;AF1=0.499996;AC1=1;DP4=6,5,2,1;MQ=56;FQ=21.0492;PV4=1,1,0.00019172,0.214086 GT:PL 0/1:48,0,252
Scaffold_1 940905 . T C 21.0411 PASS DP=14;VDB=0.681436;SGB=-0.511536;RPB=0.839457;MQB=0.040184;MQSB=0.958048;BQB=0.597928;MQ0F=0;AF1=0.499998;AC1=1;DP4=6,4,2,1;MQ=56;FQ=24.0321;PV4=1,1,0.000372765,1 GT:PL 0/1:51,0,224
Scaffold_1 940924 . A T 78.0075 PASS DP=16;VDB=0.661214;SGB=-0.590765;RPB=0.764228;MQB=0.197899;MQSB=0.75;BQB=0.965069;MQ0F=0;AF1=0.5;AC1=1;DP4=8,1,4,1;MQ=56;FQ=81.0157;PV4=1,0.285054,0.0164675,1 GT:PL 0/1:108,0,204
Scaffold_1 940948 . C T 73.0074 PASS DP=13;VDB=0.397076;SGB=-0.556411;RPB=0.895781;MQB=0.503877;MQSB=0.6875;BQB=0.783809;MQ0F=0;AF1=0.5;AC1=1;DP4=5,1,3,1;MQ=57;FQ=76.0156;PV4=1,0.142286,0.0448151,1 GT:PL 0/1:103,0,177
Scaffold_1 940991 . C T 74.0075 PASS DP=14;VDB=0.23997;SGB=-0.556411;RPB=0.924449;MQB=0.803868;MQSB=0.716531;BQB=0.562708;MQ0F=0;AF1=0.5;AC1=1;DP4=5,2,3,1;MQ=59;FQ=77.0156;PV4=1,0.163694,0.100197,1 GT:PL 0/1:104,0,208
Scaffold_1 941070 . G T 84.0076 PASS DP=11;VDB=0.431509;SGB=-0.590765;RPB=0.356607;MQB=0.0891517;MQSB=0.950952;BQB=0.683497;MQ0F=0;AF1=0.5;AC1=1;DP4=2,4,3,2;MQ=55;FQ=87.0153;PV4=0.5671,0.368133,0.0391205,0.142527 GT:PL 0/1:114,0,154
Scaffold_1 941086 . T A 99.0078 PASS DP=17;VDB=0.612255;SGB=-0.616816;RPB=0.586646;MQB=0.035674;MQSB=0.606531;BQB=0.77718;MQ0F=0;AF1=0.5;AC1=1;DP4=4,4,5,1;MQ=56;FQ=102.016;PV4=0.300699,0.247167,0.00186835,0.417165 GT:PL 0/1:129,0,200
Scaffold_1 941141 . A G 170.009 PASS DP=20;VDB=0.617041;SGB=-0.662043;RPB=0.846482;MQB=0.00873218;MQSB=0.513417;BQB=0.687289;MQ0F=0;AF1=0.5;AC1=1;DP4=3,5,5,4;MQ=53;FQ=155.931;PV4=0.637186,1,0.00188715,0.0952738 GT:PL 0/1:200,0,183
Scaffold_1 941175 . C T 134.008 PASS DP=18;VDB=0.413752;SGB=-0.636426;RPB=0.92664;MQB=0.0137638;MQSB=0.797039;BQB=0.650664;MQ0F=0;AF1=0.5;AC1=1;DP4=5,5,4,3;MQ=53;FQ=137.016;PV4=1,1,0.000164461,1 GT:PL 0/1:164,0,239
Scaffold_1 941219 . A T 165.009 PASS DP=22;VDB=0.22253;SGB=-0.651104;RPB=0.933295;MQB=0.0244164;MQSB=0.263597;BQB=0.41781;MQ0F=0;AF1=0.5;AC1=1;DP4=5,6,5,3;MQ=55;FQ=168.017;PV4=0.649917,1,2.79411e-05,1 GT:PL 0/1:195,0,239
Scaffold_1 941220 . C G 165.009 PASS DP=20;VDB=0.237012;SGB=-0.651104;RPB=0.658478;MQB=0.0342181;MQSB=0.22313;BQB=0.981652;MQ0F=0;AF1=0.5;AC1=1;DP4=4,5,5,3;MQ=54;FQ=168.008;PV4=0.637186,0.417465,0.000120946,1 GT:PL 0/1:195,0,222
Scaffold_1 941233 . T C 142.008 PASS DP=18;VDB=0.350542;SGB=-0.636426;RPB=0.698693;MQB=0.058652;MQSB=0.339296;BQB=0.416716;MQ0F=0;AF1=0.5;AC1=1;DP4=4,5,4,3;MQ=54;FQ=145.013;PV4=1,1,0.0010786,1 GT:PL 0/1:172,0,203
Scaffold_1 941234 . G A 123.008 PASS DP=18;VDB=0.191363;SGB=-0.616816;RPB=0.522814;MQB=0.0950891;MQSB=0.476686;BQB=0.910176;MQ0F=0;AF1=0.5;AC1=1;DP4=4,6,3,3;MQ=56;FQ=126.016;PV4=1,1,0.000547792,1 GT:PL 0/1:153,0,226
Scaffold_1 941235 . G A 106.008 PASS DP=18;VDB=0.200927;SGB=-0.616816;RPB=0.399018;MQB=0.118442;MQSB=0.399018;BQB=0.244551;MQ0F=0;AF1=0.5;AC1=1;DP4=3,5,3,3;MQ=55;FQ=109.016;PV4=1,0.0152374,0.00174464,1 GT:PL 0/1:136,0,210
Scaffold_1 941270 . G A 152.008 PASS DP=20;VDB=0.717818;SGB=-0.662043;RPB=0.682718;MQB=0.0431593;MQSB=0.341501;BQB=0.988522;MQ0F=0;AF1=0.5;AC1=1;DP4=3,8,5,4;MQ=54;FQ=155.016;PV4=0.361848,0.407521,0.000458679,0.151482 GT:PL 0/1:182,0,219
Scaffold_1 941281 . G A 69.0074 PASS DP=17;VDB=0.543918;SGB=-0.590765;RPB=0.655816;MQB=0.0497871;MQSB=0.651439;BQB=0.339596;MQ0F=0;AF1=0.5;AC1=1;DP4=4,6,4,1;MQ=55;FQ=72.0156;PV4=0.282051,0.0109596,1.50668e-05,0.305152 GT:PL 0/1:99,0,245
Scaffold_1 941286 . T G 78.0075 PASS DP=18;VDB=0.548401;SGB=-0.590765;RPB=0.76338;MQB=0.0497871;MQSB=0.511891;BQB=0.859096;MQ0F=0;AF1=0.5;AC1=1;DP4=3,7,4,1;MQ=55;FQ=81.0157;PV4=0.118881,0.159064,1.50668e-05,0.239941 GT:PL 0/1:108,0,234
Scaffold_1 941299 . G T 115.008 PASS DP=21;VDB=0.775227;SGB=-0.636426;RPB=0.447612;MQB=0.137386;MQSB=0.650623;BQB=0.245705;MQ0F=0;AF1=0.5;AC1=1;DP4=5,6,4,3;MQ=56;FQ=118.016;PV4=1,0.0306428,0.00095666,0.484504 GT:PL 0/1:145,0,255
Scaffold_1 941332 . C T 102.008 PASS DP=19;VDB=0.533926;SGB=-0.636426;RPB=0.690645;MQB=0.137386;MQSB=0.86274;BQB=0.0449815;MQ0F=0;AF1=0.5;AC1=1;DP4=4,7,3,4;MQ=57;FQ=105.016;PV4=1,0.0961857,0.00346398,1 GT:PL 0/1:132,0,255
Scaffold_1 941354 . C T 117.008 PASS DP=17;VDB=0.0742966;SGB=-0.636426;RPB=0.307934;MQB=0.162817;MQSB=0.998397;BQB=0.95083;MQ0F=0;AF1=0.5;AC1=1;DP4=4,5,1,6;MQ=57;FQ=120.016;PV4=0.307692,0.381063,0.0117975,1 GT:PL 0/1:147,0,212
Scaffold_1 941365 . T C 138.008 PASS DP=16;VDB=0.0805733;SGB=-0.636426;RPB=0.714506;MQB=0.428703;MQSB=0.991701;BQB=0.925999;MQ0F=0;AF1=0.5;AC1=1;DP4=4,3,2,5;MQ=58;FQ=139.823;PV4=0.592075,1,0.0550494,1 GT:PL 0/1:168,0,173
Scaffold_1 941399 . A G 173.009 PASS DP=16;VDB=0.175997;SGB=-0.651104;RPB=0.934676;MQB=0.110153;MQSB=0.603142;BQB=0.792156;MQ0F=0;AF1=0.5;AC1=1;DP4=4,4,3,5;MQ=57;FQ=170.561;PV4=1,1,0.00749896,1 GT:PL 0/1:203,0,199
Scaffold_1 941480 . G A 78.0075 PASS DP=9;VDB=0.211317;SGB=-0.556411;RPB=0.89338;MQB=0.0812164;MQSB=0.89338;BQB=0.649731;MQ0F=0;AF1=0.5;AC1=1;DP4=2,3,2,2;MQ=53;FQ=81.0155;PV4=1,0.0877999,5.1207e-06,1 GT:PL 0/1:108,0,151
Scaffold_1 941483 . A G 93.0077 PASS DP=9;VDB=0.211317;SGB=-0.556411;RPB=0.89338;MQB=0.0812164;MQSB=0.89338;BQB=0.162433;MQ0F=0;AF1=0.5;AC1=1;DP4=2,3,2,2;MQ=53;FQ=95.5009;PV4=1,1,5.1207e-06,1 GT:PL 0/1:123,0,132
Scaffold_1 941487 . C T 78.0075 PASS DP=9;VDB=0.202231;SGB=-0.556411;RPB=0.89338;MQB=0.0812164;MQSB=0.89338;BQB=0.730948;MQ0F=0;AF1=0.5;AC1=1;DP4=2,3,2,2;MQ=53;FQ=81.0151;PV4=1,0.235747,5.1207e-06,1 GT:PL 0/1:108,0,147
Scaffold_1 941489 . G A 96.0077 PASS DP=10;VDB=0.211317;SGB=-0.556411;RPB=0.62023;MQB=0.124046;MQSB=0.900802;BQB=0.992367;MQ0F=0;AF1=0.5;AC1=1;DP4=1,3,2,2;MQ=52;FQ=94.2515;PV4=1,1,3.22115e-05,1 GT:PL 0/1:126,0,123
Scaffold_1 941500 . T C 117.008 PASS DP=13;VDB=0.906964;SGB=-0.616816;RPB=0.895781;MQB=0.0559863;MQSB=0.666643;BQB=0.895781;MQ0F=0;AF1=0.5;AC1=1;DP4=1,3,4,2;MQ=48;FQ=90.0115;PV4=0.52381,0.223407,0.00923235,0.0365466 GT:PL 0/1:147,0,117
Scaffold_1 941508 . G A 107.008 PASS DP=13;VDB=0.906964;SGB=-0.616816;RPB=0.891517;MQB=0.0297172;MQSB=0.564628;BQB=0.950952;MQ0F=0;AF1=0.5;AC1=1;DP4=1,4,4,2;MQ=50;FQ=103.043;PV4=0.242424,0.4393,0.00437228,0.126607 GT:PL 0/1:137,0,131
Scaffold_1 941536 . C A 99.0078 PASS DP=13;VDB=0.863807;SGB=-0.616816;RPB=0.828239;MQB=0.0102252;MQSB=0.649117;BQB=0.623736;MQ0F=0;AF1=0.5;AC1=1;DP4=1,6,2,4;MQ=50;FQ=102.007;PV4=0.559441,1,0.000289703,1 GT:PL 0/1:129,0,156
Scaffold_1 941549 . G A 74.0075 PASS DP=11;VDB=0.409395;SGB=-0.590765;RPB=0.952347;MQB=0.0476173;MQSB=0.733186;BQB=0.333321;MQ0F=0;AF1=0.5;AC1=1;DP4=1,4,2,3;MQ=49;FQ=77.0149;PV4=1,0.0374536,0.00250624,1 GT:PL 0/1:104,0,142
Scaffold_1 941553 . T C 84.0076 PASS DP=11;VDB=0.377852;SGB=-0.616816;RPB=0.8618;MQB=0.0297172;MQSB=0.829029;BQB=0.208021;MQ0F=0;AF1=0.5;AC1=1;DP4=1,4,2,4;MQ=48;FQ=87.0049;PV4=1,0.0486243,0.0010981,1 GT:PL 0/1:114,0,140
Scaffold_1 941554 . G A 79.0075 PASS DP=11;VDB=0.405004;SGB=-0.590765;RPB=0.952347;MQB=0.0476173;MQSB=0.733186;BQB=0.333321;MQ0F=0;AF1=0.5;AC1=1;DP4=1,4,2,3;MQ=49;FQ=82.0135;PV4=1,0.0199843,0.00250624,1 GT:PL 0/1:109,0,142
Scaffold_1 941641 . A T 48.0072 PASS DP=13;VDB=0.774933;SGB=-0.590765;RPB=0.765017;MQB=0.0137638;MQSB=0.985816;BQB=0.958048;MQ0F=0;AF1=0.5;AC1=1;DP4=2,6,1,4;MQ=52;FQ=51.0153;PV4=1,0.212382,0.000106523,0.170102 GT:PL 0/1:78,0,185
Scaffold_1 941709 . A T 23.0285 PASS DP=10;VDB=0.0312982;SGB=-0.511536;RPB=0.150134;MQB=0.150134;MQSB=0.900802;BQB=0.900802;MQ0F=0.2;AF1=0.499999;AC1=1;DP4=2,3,1,2;MQ=52;FQ=26.0258;PV4=1,1,0.0124505,1 GT:PL 0/1:53,0,153
Scaffold_1 941737 . A C 21.0411 PASS DP=10;VDB=0.258586;SGB=-0.590765;RPB=0.0812164;MQB=0.0812164;MQSB=0.924584;BQB=0.487298;MQ0F=0.2;AF1=0.499998;AC1=1;DP4=2,2,1,4;MQ=47;FQ=24.0321;PV4=0.52381,1,0.00948797,1 GT:PL 0/1:51,0,121
Scaffold_1 941746 . G A 44.0073 PASS DP=10;VDB=0.258586;SGB=-0.590765;RPB=0.0812164;MQB=0.0812164;MQSB=0.924584;BQB=0.974597;MQ0F=0.2;AF1=0.5;AC1=1;DP4=2,2,1,4;MQ=47;FQ=47.0119;PV4=0.52381,1,0.00948797,1 GT:PL 0/1:74,0,105
Scaffold_1 942024 . T C 13.943 PASS DP=2;VDB=0.22;SGB=-0.453602;MQ0F=0;AF1=1;AC1=2;DP4=0,0,2,0;MQ=29;FQ=-32.9881 GT:PL 1/1:45,6,0
Scaffold_1 942025 . A T 13.943 PASS DP=2;VDB=0.22;SGB=-0.453602;MQ0F=0;AF1=1;AC1=2;DP4=0,0,2,0;MQ=29;FQ=-32.9881 GT:PL 1/1:45,6,0
Scaffold_1 942264 . A G 78.0075 PASS DP=8;VDB=0.0483573;SGB=-0.556411;RPB=1.01283;MQB=1.01283;MQSB=1;BQB=0.810265;MQ0F=0;AF1=0.5;AC1=1;DP4=1,2,4,0;MQ=60;FQ=53.0085;PV4=0.142857,1,1,1 GT:PL 0/1:108,0,80
Scaffold_1 942274 . G A 76.0075 PASS DP=8;VDB=0.0483573;SGB=-0.556411;RPB=0.868321;MQB=0.868321;MQSB=0.750668;BQB=0.62023;MQ0F=0;AF1=0.5;AC1=1;DP4=1,3,4,0;MQ=60;FQ=72.8223;PV4=0.142857,1,1,1 GT:PL 0/1:106,0,101
Scaffold_1 942327 . A C 106.008 PASS DP=10;VDB=0.106137;SGB=-0.590765;RPB=0.406082;MQB=0.89338;MQSB=0.89338;BQB=0.974597;MQ0F=0;AF1=0.5;AC1=1;DP4=1,3,4,1;MQ=58;FQ=88.9726;PV4=0.206349,0.364717,0.203542,1 GT:PL 0/1:136,0,116
Scaffold_1 942378 . A T 92.0077 PASS DP=12;VDB=0.719819;SGB=-0.556411;RPB=0.895781;MQB=0.783809;MQSB=0.783809;BQB=0.783809;MQ0F=0;AF1=0.5;AC1=1;DP4=3,3,3,1;MQ=58;FQ=95.0155;PV4=0.571429,1,0.120752,0.26634 GT:PL 0/1:122,0,163
Scaffold_1 942403 . G C 16.1143 PASS DP=15;VDB=0.22;SGB=-0.453602;RPB=0.95;MQB=1;MQSB=0.95494;BQB=0.6;MQ0F=0;AF1=0.499994;AC1=1;DP4=4,6,1,1;MQ=60;FQ=19.069;PV4=1,0.459609,1,1 GT:PL 0/1:46,0,255